VariantTable
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BAC clone ordering.
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name
Sox21 (ENSMUSG00000061517)
type
gene
link
VEGA
Ensembl
MGI
xref
definition
locus_tag
: Sox21
note
: SRY (sex determining region Y)-box 21 [Source:MGI Symbol;Acc:MGI:2654070]
name
Sox21 (ENSMUSG00000061517)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000170662
name
Sox21 (ENSMUSG00000061517)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS27334.1
Uniprot/SWISSPROT:
Q811W0
RefSeq_peptide:
NP_808421
RefSeq_mRNA:
NM_177753.3
Vega_transcript:
OTTMUST00000094042
Vega_transcript:
Sox21-001
UCSC:uc007uyt.2
EMBL:
AY069926
EMBL:
AY142959
EMBL:
BC069176
EMBL:
BC147556
EMBL:
BC147565
GO:
GO:0001942
GO:
GO:0003677
GO:
GO:0003700
GO:
GO:0005634
GO:
GO:0006351
GO:
GO:0006355
GO:
GO:0042633
GO:
GO:0043588
GO:
GO:0048863
GO:
GO:0048863
MGI_trans_name:
Sox21-001
Vega_translation:
216617
Vega_translation:
OTTMUSP00000052241
goslim_goa:
GO:0001071
goslim_goa:
GO:0003674
goslim_goa:
GO:0003677
goslim_goa:
GO:0005575
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005634
goslim_goa:
GO:0008150
goslim_goa:
GO:0009058
goslim_goa:
GO:0030154
goslim_goa:
GO:0034641
goslim_goa:
GO:0043226
goslim_goa:
GO:0048856
protein_id:
AAH69176.1
protein_id:
AAI47557.1
protein_id:
AAI47566.1
protein_id:
AAL49967.1
protein_id:
AAN60055.1
OTTP:
OTTMUSP00000052241
OTTT:
OTTMUST00000094042
UniParc:
UPI0000004EC1
definition
note
: transcript_id=ENSMUST00000170662
protein_id
: ENSMUSP00000127396
translation
: MSKPVDHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTESEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTLLKKDKFAFPVPYGLGSVADAEHPALKAGAGLHAGAGGGLVPESLLANPEKAAAAAAAAAARVFFPQSAAAAAAAAAAAAAGSPYSLLDLGSKMAEISSSSSGLPYASSLGYPTAGAGAFHGAAAAAAAAAAAAGGHTHSHPSPGNPGYMIPCNCSAWPSPGLQPPLAYILLPGMGKPQLDPYPAAYAAAL
name
type
misc_feature
link
xref
definition
note
: contig CT025686.7 1..171883(-1)
Location
chromosome :
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
X
(Build: mm10)
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Annotation:
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genetic markers
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RefSeq genes :
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Gene, mRNA, CDS :
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MSM BAC end pairs :
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B6N BAC end pairs :
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MSMv4 :
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JF1v3 :
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KJRv1 :
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SWNv1 :
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CHDv1 :
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NJLv1 :
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BLG2v1 :
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HMIv1 :
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BFMv1 :
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PGNv1 :
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Click to browse alignment view.