VariantTable
SequenceCutter
Homology
search
Download
Updated genome
information
Help
& Docs
Previous ver
(NIG_MoG data)
Tutorials are available here.
Search for genomic variation
Search for mouse strain
BAC clone ordering.
cursor point :
On scale region : Click two point for zoom in view region.
On read coverage region : Click to browse alignment view.
name
Sox10 (ENSMUSG00000033006)
type
gene
link
VEGA
Ensembl
MGI
xref
definition
locus_tag
: Sox10
note
: SRY (sex determining region Y)-box 10 [Source:MGI Symbol;Acc:MGI:98358]
name
Sox10 (ENSMUSG00000033006)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000040019
name
Sox10 (ENSMUSG00000033006)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS49668.1
Uniprot/SWISSPROT:
Q04888
RefSeq_peptide:
NP_035567
RefSeq_mRNA:
NM_011437.1
RefSeq_mRNA_predicted:
XM_006520672.1
RefSeq_peptide_predicted:
XP_006520735.1
UCSC:uc007wsu.2
EMBL:
AF017182
EMBL:
AF047043
EMBL:
BC018551
EMBL:
BC023356
EMBL:
BC025171
EMBL:
U66141
EMBL:
U70441
EMBL:
Z18959
GO:
GO:0000978
GO:
GO:0000980
GO:
GO:0000981
GO:
GO:0001190
GO:
GO:0001701
GO:
GO:0001755
GO:
GO:0002052
GO:
GO:0003677
GO:
GO:0003677
GO:
GO:0003682
GO:
GO:0003700
GO:
GO:0003705
GO:
GO:0005515
GO:
GO:0005515
GO:
GO:0005515
GO:
GO:0005634
GO:
GO:0005737
GO:
GO:0005737
GO:
GO:0006355
GO:
GO:0006366
GO:
GO:0007422
GO:
GO:0008134
GO:
GO:0008134
GO:
GO:0014015
GO:
GO:0030154
GO:
GO:0030318
GO:
GO:0031315
GO:
GO:0032808
GO:
GO:0042802
GO:
GO:0042802
GO:
GO:0043066
GO:
GO:0044212
GO:
GO:0045892
GO:
GO:0045893
GO:
GO:0045893
GO:
GO:0045944
GO:
GO:0048469
GO:
GO:0048484
GO:
GO:0048546
GO:
GO:0048589
GO:
GO:0048709
GO:
GO:0048863
GO:
GO:0061138
GO:
GO:0090090
MGI_trans_name:
Sox10-201
goslim_goa:
GO:0000988
goslim_goa:
GO:0001071
goslim_goa:
GO:0003674
goslim_goa:
GO:0003677
goslim_goa:
GO:0005575
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005634
goslim_goa:
GO:0005737
goslim_goa:
GO:0005739
goslim_goa:
GO:0008134
goslim_goa:
GO:0008150
goslim_goa:
GO:0009058
goslim_goa:
GO:0009790
goslim_goa:
GO:0021700
goslim_goa:
GO:0030154
goslim_goa:
GO:0034641
goslim_goa:
GO:0040007
goslim_goa:
GO:0040011
goslim_goa:
GO:0043226
goslim_goa:
GO:0043473
goslim_goa:
GO:0048856
goslim_goa:
GO:0048870
protein_id:
AAB49282.1
protein_id:
AAB99738.1
protein_id:
AAC24564.1
protein_id:
AAC52859.1
protein_id:
AAH18551.1
protein_id:
AAH23356.1
protein_id:
AAH25171.1
protein_id:
CAA79484.1
UniParc:
UPI00000019C3
definition
note
: transcript_id=ENSMUST00000040019
protein_id
: ENSMUSP00000039466
translation
: MAEEQDLSEVELSPVGSEEPRCLSPGSAPSLGPDGGGGGSGLRASPGPGELGKVKKEQQDGEADDDKFPVCIREAVSQVLSGYDWTLVPMPVRVNGASKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKNGKAAQGEAECPGGEAEQGGAAAIQAHYKSAHLDHRHPEEGSPMSDGNPEHPSGQSHGPPTPPTTPKTELQSGKADPKRDGRSLGEGGKPHIDFGNVDIGEISHEVMSNMETFDVTELDQYLPPNGHPGHVGSYSAAGYGLGSALAVASGHSAWISKPPGVALPTVSPPGVDAKAQVKTETTGPQGPPHYTDQPSTSQIAYTSLSLPHYGSAFPSISRPQFDYSDHQPSGPYYGHAGQASGLYSAFSYMGPSQRPLYTAISDPSPSGPQSHSPTHWEQPVYTTLSRP
name
type
misc_feature
link
xref
definition
note
: contig AL591921.6 1..114704(-1)
Location
chromosome :
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
X
(Build: mm10)
view_point (b.p.) :
-
zoom in :
zoom out :
Picture width(pt) :
Colors
Annotation:
Gene
mRNA
CDS
genetic markers
Tracks
RefSeq genes :
not show
show
Gene, mRNA, CDS :
not show
show
MSM BAC end pairs :
not show
show
B6N BAC end pairs :
not show
show
MSMv4 :
not show
show
JF1v3 :
not show
show
KJRv1 :
not show
show
SWNv1 :
not show
show
CHDv1 :
not show
show
NJLv1 :
not show
show
BLG2v1 :
not show
show
HMIv1 :
not show
show
BFMv1 :
not show
show
PGNv1 :
not show
show
Click to browse alignment view.