MoG+ -Mouse Genome database with high added value-

Target CDS Information

Gene Symbol (Gene ID)

Ilf2 (ENSMUSG00000001016)

Cross Reference

CCDS	CCDS17530.1
EMBL	AF458249, AK013858, AK031892, ...show all
Fantom	3000002D13, 6230405A16, 6330441H14, ...show all
GO	GO:0003677, GO:0003677, GO:0003725, ...show all
goslim_goa	GO:0002376, GO:0003674, GO:0003677, ...show all
MGI_trans_name	Ilf2-002
OTTP	OTTMUSP00000070478
OTTT	OTTMUST00000132072
PDB	4AT7, 4AT8, 4AT9, ...show all
protein_id	AAH04033.1, AAH24718.1, AAL59388.1, ...show all

RefSeq_mRNA	NM_026374.3
RefSeq_peptide	NP_080650
UCSC	uc008qcj.1
UniParc	UPI0000027483
Uniprot/SWISSPROT	Q9CXY6
Vega_transcript	Ilf2-002, OTTMUST00000132072
Vega_translation	187820, OTTMUSP00000070478

Definition

protein_id:ENSMUSP00000001042
translation:

MRGDRGRGRGGRFGSRGGPGGGFRPFVPHIPFDFYLCEMAFPRVKPAPDETSFSEALLKR
NQDLAPNSAEQASILSLVTKINNVIDNLIVAPGTFEVQIEEVRQVGSYKKGTMTTGHNVA
DLVVILKILPTLEAVAALGNKVVESLRAQDPSEVLTMLTNETGFEISSSDATVKILITTV
PPNLRKLDPELHLDIKVLQSALAAIRHARWFEENASQSTVKVLIRLLKDLRIRFPGFEPL
TPWILDLLGHYAVMNNPTRQPLALNVAYRRCLQILAAGLFLPGSVGITDPCESGNFRVHT
VMTLEQQDMVCYTAQTLVRILSHGGFRKILGQEGDASYLASEISTWDGVIVTPSEKAYEK
PPEKKEGEEEEENTEEPPQGEEEESMETQE

Chromosome

Length
Position(start - end)

11,377
90,476,241 - 90,487,619

Orient to Chromosome

plus

Link

Location : (3:90476241-90487619)
/

Detail Map

name	Ilf2 (ENSMUSG00000001016)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : Ilf2 note : interleukin enhancer binding factor 2 [Source:MGI Symbol;Acc:MGI:1915031]

name	Snapin (ENSMUSG00000001018)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : Snapin note : SNAP-associated protein [Source:MGI Symbol;Acc:MGI:1333745]

name	Ilf2 (ENSMUSG00000001016)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000001042

name	Snapin (ENSMUSG00000001018)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000149884

name	Snapin (ENSMUSG00000001018)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000185005

name	Snapin (ENSMUSG00000001018)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000184877

name	Ilf2 (ENSMUSG00000001016) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS17530.1 Uniprot/SWISSPROT:Q9CXY6 RefSeq_peptide:NP_080650 RefSeq_mRNA:NM_026374.3 Vega_transcript:Ilf2-002 Vega_transcript:OTTMUST00000132072 UCSC:uc008qcj.1 Fantom:3000002D13 Fantom:6230405A16 Fantom:6330441H14 Fantom:F830203K14 EMBL:AF458249 EMBL:AK013858 EMBL:AK031892 EMBL:AK078003 EMBL:AK157129 EMBL:BC004033 EMBL:BC024718 GO:GO:0003677 GO:GO:0003677 GO:GO:0003725 GO:GO:0003725 GO:GO:0005515 GO:GO:0005524 GO:GO:0005634 GO:GO:0005634 GO:GO:0005654 GO:GO:0005654 GO:GO:0005730 GO:GO:0005730 GO:GO:0005737 GO:GO:0006351 GO:GO:0006351 GO:GO:0006955 GO:GO:0016020 GO:GO:0016020 GO:GO:0016740 GO:GO:0030529 GO:GO:0030529 GO:GO:0044822 GO:GO:0044822 GO:GO:0045893 GO:GO:0045893 MGI_trans_name:Ilf2-002 PDB:4AT7 PDB:4AT8 PDB:4AT9 PDB:4ATB Vega_translation:187820 Vega_translation:OTTMUSP00000070478 goslim_goa:GO:0002376 goslim_goa:GO:0003674 goslim_goa:GO:0003677 goslim_goa:GO:0003723 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0005730 goslim_goa:GO:0005737 goslim_goa:GO:0008150 goslim_goa:GO:0009058 goslim_goa:GO:0034641 goslim_goa:GO:0043167 goslim_goa:GO:0043226 protein_id:AAH04033.1 protein_id:AAH24718.1 protein_id:AAL59388.1 protein_id:BAB29021.1 protein_id:BAC27594.1 protein_id:BAC37097.1 protein_id:BAE33972.1 OTTP:OTTMUSP00000070478 OTTT:OTTMUST00000132072 UniParc:UPI0000027483
definition	note : transcript_id=ENSMUST00000001042 protein_id : ENSMUSP00000001042 translation : MRGDRGRGRGGRFGSRGGPGGGFRPFVPHIPFDFYLCEMAFPRVKPAPDETSFSEALLKRNQDLAPNSAEQASILSLVTKINNVIDNLIVAPGTFEVQIEEVRQVGSYKKGTMTTGHNVADLVVILKILPTLEAVAALGNKVVESLRAQDPSEVLTMLTNETGFEISSSDATVKILITTVPPNLRKLDPELHLDIKVLQSALAAIRHARWFEENASQSTVKVLIRLLKDLRIRFPGFEPLTPWILDLLGHYAVMNNPTRQPLALNVAYRRCLQILAAGLFLPGSVGITDPCESGNFRVHTVMTLEQQDMVCYTAQTLVRILSHGGFRKILGQEGDASYLASEISTWDGVIVTPSEKAYEKPPEKKEGEEEEENTEEPPQGEEEESMETQE

name	Snapin (ENSMUSG00000001018) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS17531.1 Uniprot/SWISSPROT:Q9Z266 RefSeq_peptide:NP_598615 RefSeq_mRNA:NM_133854.3 Vega_transcript:OTTMUST00000052477 Vega_transcript:Snapin-001 UCSC:uc008qck.2 Fantom:1810012J15 Fantom:5930412H19 Fantom:A930017G24 Fantom:C130029G03 Fantom:C730023C22 Fantom:I830046K22 EMBL:AF086838 EMBL:AK007458 EMBL:AK048007 EMBL:AK050151 EMBL:AK077840 EMBL:AK080718 EMBL:AK152057 EMBL:BC006744 EMBL:BC048691 GO:GO:0000139 GO:GO:0000149 GO:GO:0000149 GO:GO:0005515 GO:GO:0005515 GO:GO:0005515 GO:GO:0005730 GO:GO:0005730 GO:GO:0005794 GO:GO:0005794 GO:GO:0005829 GO:GO:0006886 GO:GO:0007268 GO:GO:0008021 GO:GO:0008021 GO:GO:0008089 GO:GO:0008333 GO:GO:0008333 GO:GO:0010977 GO:GO:0016079 GO:GO:0016079 GO:GO:0016188 GO:GO:0017156 GO:GO:0030054 GO:GO:0030133 GO:GO:0030141 GO:GO:0030141 GO:GO:0030659 GO:GO:0030672 GO:GO:0031083 GO:GO:0031175 GO:GO:0031629 GO:GO:0043393 GO:GO:0043393 GO:GO:0045202 GO:GO:0045202 GO:GO:0048471 GO:GO:0048471 GO:GO:0048489 GO:GO:0048489 GO:GO:0048490 GO:GO:0072553 GO:GO:0097352 MGI_trans_name:Snapin-001 Vega_translation:187821 Vega_translation:OTTMUSP00000024888 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005730 goslim_goa:GO:0005737 goslim_goa:GO:0005794 goslim_goa:GO:0005829 goslim_goa:GO:0006810 goslim_goa:GO:0006914 goslim_goa:GO:0006950 goslim_goa:GO:0007034 goslim_goa:GO:0007267 goslim_goa:GO:0008150 goslim_goa:GO:0009056 goslim_goa:GO:0016023 goslim_goa:GO:0016192 goslim_goa:GO:0021700 goslim_goa:GO:0030154 goslim_goa:GO:0030705 goslim_goa:GO:0043226 goslim_goa:GO:0043234 goslim_goa:GO:0048856 goslim_goa:GO:0061024 protein_id:AAD11418.1 protein_id:AAH06744.1 protein_id:AAH48691.1 protein_id:BAB25049.1 protein_id:BAC33212.1 protein_id:BAC34095.1 protein_id:BAC37029.1 protein_id:BAC37991.1 protein_id:BAE30913.1 OTTP:OTTMUSP00000024888 OTTT:OTTMUST00000052477 Reactome:R-MMU-199991 Reactome:R-MMU-199992 Reactome:R-MMU-421837 Reactome:R-MMU-432722 Reactome:R-MMU-5653656 UniParc:UPI0000020B0D
definition	note : transcript_id=ENSMUST00000149884 protein_id : ENSMUSP00000122090 translation : MAAAGSAAVSGAGTPVAGPTGRDLFAEGLLEFLRPAVQQLDSHVHAVRESQVELREQIDNLATELCRINEDQKVALDLDPYVKKLLNARRRVVLVNNILQNAQERLRRLNHSVAKETARRRAMLDSGVYPPGSPSK

name	Snapin (ENSMUSG00000001018) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000052479 Vega_transcript:Snapin-003 Uniprot/SPTREMBL:V9GXI0 UCSC:uc008qck.2 EMBL:AC160552 GO:GO:0000149 GO:GO:0005515 GO:GO:0005730 GO:GO:0005794 GO:GO:0005829 GO:GO:0006886 GO:GO:0007268 GO:GO:0008021 GO:GO:0008333 GO:GO:0016079 GO:GO:0016188 GO:GO:0031083 GO:GO:0031629 GO:GO:0043393 GO:GO:0045202 GO:GO:0048471 GO:GO:0048489 GO:GO:0072553 GO:GO:0097352 MGI_trans_name:Snapin-003 Vega_translation:187822 Vega_translation:OTTMUSP00000062669 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005730 goslim_goa:GO:0005737 goslim_goa:GO:0005794 goslim_goa:GO:0005829 goslim_goa:GO:0006810 goslim_goa:GO:0006914 goslim_goa:GO:0006950 goslim_goa:GO:0007034 goslim_goa:GO:0007267 goslim_goa:GO:0008150 goslim_goa:GO:0009056 goslim_goa:GO:0016023 goslim_goa:GO:0016192 goslim_goa:GO:0021700 goslim_goa:GO:0043226 goslim_goa:GO:0043234 goslim_goa:GO:0061024 OTTP:OTTMUSP00000062669 OTTT:OTTMUST00000052479 UniParc:UPI000268B562
definition	note : transcript_id=ENSMUST00000185005 protein_id : ENSMUSP00000139160 translation : MAAAGSAAVSGAGTPVAGPTGRDLFAEGLLEFLRPAVQQLDSHVHAVRTVPDQ

name
type	STS
link
xref	UniSTS_NUM:185553 UniSTS:AV026596 WI_MRC-RH:481179
definition	note : map_weight=1 standard_name : AV026596

name
type	STS
link
xref	UniSTS_NUM:162506 UniSTS:RH125753 UniSTS:AA407989
definition	note : map_weight=1 standard_name : RH125753

name
type	misc_feature
link
xref
definition	note : contig AC160552.13 33294..210051(1)

name	Ilf2 (ENSMUSG00000001016)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000132069 Vega_transcript:OTTMUST00000132069 MGI_trans_name:Ilf2-001 OTTT:OTTMUST00000132069
definition	note : retained_intron note : transcript_id=ENSMUST00000196769

name	Ilf2 (ENSMUSG00000001016)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000132070 Vega_transcript:OTTMUST00000132070 MGI_trans_name:Ilf2-003 OTTT:OTTMUST00000132070
definition	note : retained_intron note : transcript_id=ENSMUST00000197644

name	Ilf2 (ENSMUSG00000001016)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000132071 Vega_transcript:OTTMUST00000132071 MGI_trans_name:Ilf2-004 OTTT:OTTMUST00000132071
definition	note : retained_intron note : transcript_id=ENSMUST00000198738

name	Ilf2 (ENSMUSG00000001016)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000132073 Vega_transcript:OTTMUST00000132073 MGI_trans_name:Ilf2-005 OTTT:OTTMUST00000132073
definition	note : retained_intron note : transcript_id=ENSMUST00000198325

name	Ilf2 (ENSMUSG00000001016)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000132075 Vega_transcript:OTTMUST00000132075 MGI_trans_name:Ilf2-007 OTTT:OTTMUST00000132075
definition	note : retained_intron note : transcript_id=ENSMUST00000198641

name	Snapin (ENSMUSG00000001018)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000052481 Vega_transcript:OTTMUST00000052481 MGI_trans_name:Snapin-005 OTTT:OTTMUST00000052481
definition	note : retained_intron note : transcript_id=ENSMUST00000107352

name	Snapin (ENSMUSG00000001018)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000052480 Vega_transcript:OTTMUST00000052480 MGI_trans_name:Snapin-004 OTTT:OTTMUST00000052480
definition	note : retained_intron note : transcript_id=ENSMUST00000107351

Polymorphisms Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Ilf2 (ENSMUSG00000001016)
Transcript ID	ENSMUST00000001042

Reports
substitution
cSNPs	1
Insertion	19
Deletion	21
SNPs	-1kb 90471227(c.-5014A>G), 90471232(c.-5009A>G), 90471243(c.-4998A>G), 90471285(c.-4956G>A), 90473763(c.-2478G>A), 90473778(c.-2463C>T), 90473879(c.-2362G>A), 90473946(c.-2295C>T), 90474020(c.-2221T>C), 90474107(c.-2134T>C), 90474227(c.-2014C>T), 90474380(c.-1861G>C), 90474532(c.-1709A>G), 90474571(c.-1670C>G), 90474579(c.-1662T>A), 90475204(c.-1037T>C), 90475241(c.-1000A>G), 90475357(c.-884A>T), 90475386(c.-855C>T), 90475407(c.-834C>T), 90475576(c.-665G>A), 90475607(c.-634T>C), 90475827(c.-414A>G), 90475832(c.-409G>A), 90475944(c.-297C>A), 90475946(c.-295T>C), 90475953(c.-288C>T), 5'UTR 90476179(c.-62A>T), CDS 90487505(c.1059C>T), 3'UTR 90487689(c.70C>A), 90487784(c.165C>T), 90487811(c.192C>T), 90487818(c.199G>A), 90487845(c.226A>G), 90487899(c.280G>A), 90488123(c.504C>T), 90488157(c.538A>T), 90488316(c.697A>G), 90488363(c.744T>A), INTRON 90476521(c.5+276T>C), 90476619(c.5+374T>G), 90476794(c.6-211A>T), 90476880(c.6-125A>T), 90477090(c.65+26C>T), 90477197(c.66-123C>T), 90477473(c.108+111T>G), 90477497(c.108+135C>A), 90477675(c.108+313T>C), 90477894(c.108+532G>A), 90478056(c.108+694G>T), 90478233(c.108+871A>C), 90478346(c.108+984T>C), 90478364(c.108+1002C>T), 90478421(c.108+1059T>A), 90478679(c.108+1317C>T), 90478781(c.108+1419T>G), 90478968(c.108+1606C>T), 90479248(c.109-1356T>C), 90479318(c.109-1286T>A), 90479320(c.109-1284T>A), 90479528(c.109-1076T>C), 90479886(c.109-718C>T), 90480070(c.109-534T>C), 90480379(c.109-225G>T), 90480430(c.109-174A>T), 90480786(c.213+78G>A), 90481556(c.394+90C>T), 90481696(c.394+230C>G), 90481884(c.394+418C>T), 90482062(c.394+596A>G), 90482266(c.395-511G>A), 90482291(c.395-486A>G), 90482647(c.395-130T>C), 90483159(c.460+317C>T), 90483206(c.460+364G>C), 90483393(c.460+551T>C), 90483514(c.460+672T>C), 90483545(c.460+703T>C), 90483603(c.460+761T>C), 90483724(c.461-730A>G), 90483825(c.461-629T>A), 90484027(c.461-427G>T), 90484030(c.461-424T>A), 90484293(c.461-161C>A), 90484640(c.577+70G>T), 90484913(c.577+343C>T), 90484920(c.577+350C>T), 90485044(c.577+474G>A), 90485495(c.578-195C>T), 90485548(c.578-142A>G), 90485565(c.578-125A>G), 90485649(c.578-41A>G), 90485861(c.656+93A>G), 90485960(c.656+192A>C), 90486542(c.744+270A>G), 90486601(c.745-250A>C), 90486602(c.745-249A>G), 90486621(c.745-230G>A), 90486714(c.745-137G>A), 90486762(c.745-89G>C), 90486827(c.745-24C>G), +1kb 90488887(c.1268G>A), 90488888(c.1269C>A), 90488910(c.1291T>C), 90488951(c.1332C>A), 90489166(c.1547T>C), 90489179(c.1560T>C), 90489401(c.1782G>A), 90490101(c.2482T>C), 90490390(c.2771C>T), 90490434(c.2815C>T), 90490462(c.2843G>A), 90490486(c.2867T>C), 90490738(c.3119T>G), 90490788(c.3169A>T), 90490812(c.3193C>T), 90492946(c.5327A>G), 90492957(c.5338A>G), 90493116(c.5497A>G), 90493247(c.*5628T>C),
Insertions	-1kb 90471538 (c.-4703_-4702insCCT), 90472578 (c.-3663_-3662insA), 90473098 (c.-3143_-3142insC), 90475783 (c.-458_-457insA), 5'UTR CDS 3'UTR INTRON 90476466 (c.5+225_5+228dupTGGA), 90477421 (c.108+59_108+60insAGAATCT), 90478163 (c.108+807dupA), 90482224 (c.395-540_395-538dupTTG), 90482708 (c.395-61dupA), 90483769 (c.461-681dupG), 90484830 (c.577+263dupA), 90485075 (c.577+505_577+506insAT), 90486360 (c.744+88_744+89insC), +1kb 90488647 (c.1028_1029insATG), 90488674 (c.1054_1055dupTG), 90488679 (c.1060_1061insCC), 90488683 (c.1064_1065insCC), 90489984 (c.2365_2366insT), 90493329 (c.5710_5711insA),
Deletions	-1kb 90471211 (c.-5029_-5028delCA), 90472249 (c.-3991delA), 90472745 (c.-3495_-3494delTG), 90474788 (c.-1452_-1451delGG), 90475027 (c.-1213delT), 90475523 (c.-717_-710delAAAGATAT), 5'UTR CDS 3'UTR 90487918 (c.310_314delTTTTT), INTRON 90476661 (c.6-342delC), 90479490 (c.109-1109_109-1104delTGTTTT), 90479723 (c.109-880_109-878delTTC), 90480235 (c.109-368_109-366delAAT), 90480259 (c.109-334delT), 90480269 (c.109-334delT), 90481961 (c.394+499delC), 90482387 (c.395-389_395-388delGA), 90485095 (c.577+526delA), 90485583 (c.578-103_578-100delTGCT), 90485865 (c.656+102delC), 90485869 (c.656+102delC), +1kb 90488839 (c.1221_1224delAAAA), 90489387 (c.*1769delA),
coding sequence substitutions
premature termination by the nucleotide substitution	0
synonymous num	1
non-synonymous num	0
synonymous substitutions	90487505 (p.Pro353Pro),
non-synonymous substitutions
B6 transcript (ENSMUST00000001042)	MRGDRGRGRGGRFGSRGGPGGGFRPFVPHIPFDFYLCEMAFPRVKPAPDETSFSEALLKR NQDLAPNSAEQASILSLVTKINNVIDNLIVAPGTFEVQIEEVRQVGSYKKGTMTTGHNVA DLVVILKILPTLEAVAALGNKVVESLRAQDPSEVLTMLTNETGFEISSSDATVKILITTV PPNLRKLDPELHLDIKVLQSALAAIRHARWFEENASQSTVKVLIRLLKDLRIRFPGFEPL TPWILDLLGHYAVMNNPTRQPLALNVAYRRCLQILAAGLFLPGSVGITDPCESGNFRVHT VMTLEQQDMVCYTAQTLVRILSHGGFRKILGQEGDASYLASEISTWDGVIVTPSEKAYEK PPEKKEGEEEEENTEEPPQGEEEESMETQE*
MSMv4 transcript	MRGDRGRGRGGRFGSRGGPGGGFRPFVPHIPFDFYLCEMAFPRVKPAPDETSFSEALLKR NQDLAPNSAEQASILSLVTKINNVIDNLIVAPGTFEVQIEEVRQVGSYKKGTMTTGHNVA DLVVILKILPTLEAVAALGNKVVESLRAQDPSEVLTMLTNETGFEISSSDATVKILITTV PPNLRKLDPELHLDIKVLQSALAAIRHARWFEENASQSTVKVLIRLLKDLRIRFPGFEPL TPWILDLLGHYAVMNNPTRQPLALNVAYRRCLQILAAGLFLPGSVGITDPCESGNFRVHT VMTLEQQDMVCYTAQTLVRILSHGGFRKILGQEGDASYLASEISTWDGVIVTPSEKAYEK PPEKKEGEEEEENTEEPPQGEEEESMETQE*
homology	100.00 (391 / 391)

Exon Detail Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Ilf2 (ENSMUSG00000001016)
Transcript ID	ENSMUST00000001042


..........GTGGGTCTCAGAGGTTGAACTCAGGTTGTCGCGATTATACCTGCTGACTC
ACCTTGCCAACACGATAAAGTATTCCCTATTTTAATGAAGGTGCGGTTAGGTTACTTGAA
AGGAATATATGCCTACGAAAGTAAGTAATACACCAATACTTGTCAGAATCACCTAACATA
GCGAAGTGGGGAGGAGCTGGTGGAACTGGGGAAGAGAAATTTGTGATCAAGATATATTGT
ATGACCCAGTACTCGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCCTGGTC
TACAAAGTGAGTTCCAGGACAGCCAGGGCTACACAGAGAAACTCTGTCTCGGAAAAACCA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGATATATTGTATGAATTTTTTTCAATAAAA
AGAATCATATAATAGTAATACTATCGAGGGAATAGTGGTGGTAAGTGGAACTAAGTTATT
TCTCATATTTCCATAAGGTAAAAGTTATGTTTTCAGGTGAGGCGGCACACGCTGGAGATT
GCTGAGTTTGATGACAGCTCGGGCTACACTAACGAGTATTATGTAAGTCAGGATGACCGA
AAAAGACGCTATCTAAAAAAAAAAAAAAAAAAAAAAAGTTGGAGAAGAAAAAAGAATTGT
ATTTCTTGTTATGGAAAGGAAAATTTAATTGGATTATCAAAATTTTAAAAACAAAGCCTC
CGATAGCAGAGGATGGTTTCGATCCATCGACCTCTGGGTTATGGGCCCAGCACGCTTCCG
CTGCGCCACTCTGCTACCCACTGGTAGAACTCTCTTTTTTTCCATAGAAGAGCTTACCAT
TCACCGCCTCAACTTCTGAACGCCCTCCGCTGTCAGTGGGGAAAATTGCCTTCATCCCTG
TTATGTCTTCTTATTGGCTGGCTCCTTTACAGGGCATTTTTCATTGGTTGCTGCGTTAAC
CAATAAACGCGCGGGACGGAGTGAGGCGGGAGCCTATCGCGCAGGCGTTT
GTTGGGACACGCCGGCCAGACGTTTCTCAGCCTGCCTAGTTCTTCCCAGCGAAGAGCGGTTGTGTGGCCTCCATTGTTCAGGATTAAGCGAGCCATGAG
GTAAGTGGACAGAGGTGCTTGAAAG..........GAGAGTAAAATGTATGTATTTTTAG
GGGTGACAGAGGACGTGGTCGTGGTGGGCGCTTTGGTTCCAGAGGAGGGCCTGGTGGAGG
GTGAGTGTGGCTGTTTGCATCTTTG..........ACTTTGGGTTGTTTTCATGTTTCAG
GTTCAGGCCTTTTGTGCCCCATATCCCATTTGATTTTTATTTG
GTGAGTATTTTGGCTTTGGAGGACT..........TAACATGATTTGATTTCTGGTCTAG
TGTGAAATGGCTTTTCCCCGGGTCAAGCCAGCACCTGATGAGACCTCCTTCAGTGAAGCCTTGCTGAAGAGGAATCAAGACCTTGCCCCTAATTCTGCTGAGCAG
GTATGTGCTTTCCTTGGGCTGTGTC..........TATTTTTGCTTTGTGATGTTTTCAG
GCTTCCATCCTTTCTTTGGTGACAAAAATCAACAATGTGATTGACAACTTGATTGTGGCCCCAGGAACATTTGAAGTG
GTGAGTTTTTGATGACTTAATTCTA..........ACTTACTTGAAATCCCTTTCAACAG
CAAATTGAAGAAGTCCGGCAGGTAGGATCATATAAAAAGGGAACAATGACTACAGGACACAATGTGGCTGACCTGGTGGTAATACTAAAGATCCTGCCAACAT
GTAAGTGTATCTCTTATCTTTCTGC..........TTTATGTCCTTTTTCTCCAATCTAG
TGGAAGCTGTTGCTGCCCTGGGGAACAAAGTCGTGGAAAGCCTAAGGGCACAGGATCCCTCAGAAG
GTTTGAATTTGAGTTTGTTGCTAAA..........CATCTTGATTATTTTGTTCTTTTAG
TTTTGACCATGCTGACTAATGAAACTGGCTTTGAAATTAGCTCTTCTGATGCTACGGTGAAAATTCTCATTACAACAGTGCCCCCCAATCTCCGAAAACTGGATCCAGAACTCCATT
GTAAGTCTCCCCCCTCCCCATTGCT..........TTTAGCCTGTTGTACTTGTCTTCAG
TGGACATCAAGGTGTTGCAGAGCGCCTTAGCAGCCATCCGGCATGCCCGCTGGTTTGAAGAGAACGCTTCTCAGTCCAC
GTGAGTCTCATTGGTCGTTTGTATA..........CTTAATTCCTGGGTCTCTTATTCAG
AGTTAAAGTTCTCATAAGATTGCTAAAGGACTTACGGATTCGTTTTCCTGGCTTTGAGCCTCTCACACCCTGGATCCTTGACCTACTT
GTAAGTAAAAAGGGGATGCTGAGGG..........AGCTACCAGACTTACTCTCTTCCAG
GGGCACTATGCTGTAATGAACAACCCCACCAGACAGCCTTTGGCCCTGAATGTGGCTTACAG
GTATAACACACTTCTCTGGGTTTCG..........CTTTCTAAGTGTCTTTGTGTTTCAG
GCGCTGCTTGCAGATTCTGGCTGCAGGACTGTTCTTGCCTGGGTCAGTGGGCATCACTGACCCGTGTGAGAGTGGCAACTTCAGGGTACACACAGTTATGACCCTAGAACAACAG
GTATTAAGACAACCACGAAATGAGT..........TCATTTCCCTCTCCTTGTTCTTCAG
GATATGGTCTGCTACACAGCTCAGACTCTGGTTCGAATTCTCTCCCATGGAGGCTTTAGGAAGATCCTTGGCCAGGAGGGGGATGCCAGCT
GTAAGTTATCTCTGTGGTGTGGTTC..........TGGGTTTTATCCCTGTTTCTTCTAG
ATCTTGCTTCTGAAATATCTACCTGGGATGGAGTGATTGTGACACCTTCAGAAAAGGCTTATGAGAAGCCACCTGAGAAGAAGGAGGGGGAGGAAGAGGAGGAGAACACAGAAGAACCACCTCAAGGAGAAGAAGAAGAAAGCATGGAGACTCAGGAGTGACCTTCCCTTTACTGTTTCTCCCCAAGGGAAGAGAGGCTAAGCCAGCCACCATGGGGCTTTAGATGGCGGAATTTCTGTGGCATAGGGAGACAGCAGGAAGGGAAACAAACTGAAAAGAAAAAAACGCTACTGTTTCGATAGTGGCCAAGCAGCTAGAAGTCTCCTATTTGTGACTGCGTATGCCCTCTGTCTGTCTGTAAGGAAGCAGAATGCCACACATTCCCAGTATTTAAACCTAACCACTCCCAACCAAGTACTTTGTGTTGAAATGCTGTAAACAGTCATTGAGTATCTGGGAATTTTTTTTTTTTTTTCTAAGAAAAATGATTAAAGTACTTCCTACTAGGGCTTTTGGTTTTATTTTTCTTCAATATGTAGCAACTACATTTGGCTTCTATAACCTCAGTAGAATTCAAGTTGAGTCTTTTATTATAAACATTGAGATTGCTGTTTTAAATTATATAAATTGAAAGTAATAGATTCCTAGGATACCATTGTGATGGTTAATTTCTTCAGCTTGGCCTAAAATAACCTGAATTTTCTGCAAAGGATTAACCCTAAATGTGGGGTGAAAGCATCTTATGAGCTCAGTGCATGGACAGAATAAAGGGATAAATGGCAGAGTCCAGCATTCCCTTCTCTTGGAAGCTTGATCACCTCACATTCTCATGTCTCAAAATAGGCCCCAAAATATGCGTCAGTGTGACCATGTCCTGAACCCTTTGAAACCATAATAAAATAAAATTTTTTGTTAAAATAA
CCAGTACAAGCATTTATTTAATAATGTTGAGCAATACTTAATATTAACATAGTCAAGCCA
GGGTGGCCAAGAGGATAAATTATTTACCTTGACTTTACCTAAGTCCTCAGTTGTAAACAA
AGTGGAGTTACAGGTAAAGGAAACTGCCCAGCCCCAGTAATAGGAGTAACAGGATGGTTA
ACACTGGCTGGCTAAGCCTGGAAAGGATGGCGCTTAAATATGTAACTTTTAAATTTTATT
TTATGAGGATGGTTGTTTTGCCTGCATATATATCTGCATCATATGTGTGTGTGTGCTGGG
CCAAAAGGCCAGACAAGGGCATTGGGTTCCCCTGGAGCTGGAGTTAGAGGCTGCTGTGAG
TCACCATGTGGGCGCTAAGCACTGGACGCCATCTGGAAGAATCACCAGTGTTCTTAACCA
TTGAGCCATCCCTCTAGCCCTTAAAATATGTAGTCTAAACAAAAAAAAAAATCGCAAAAG
CTTAGGACTCTTAGCTGTCAAGGCTCTAACTTGACCTTGGATCCTCGCTACCTGGCATGC
TCTCCTTGGGTAGCAATGAAGGCAACAGTTGAGAAACTTGTTAATAGGAGTTAACCTAAA
CATTATAGAGTGTAAGATGATCCTGGAAAGGTTATTACCTTCTGAGAGGAACTGTGGTGA
AGCAGAGGGGGAGAAATAGGAGTATACTTTCTCACTAAATCTGGTGTTTTCTCAATTTTC
TACCACACGATGCCTAATTTACTTAGTATTCTTTGGGGGAAATATATAGAGGCTTGAGCC
CGGCACCCTGACACATGCCCATTATAATCCCAGCATTCAGGAGGCTAAGGCAAGAGGACA
TGTTTGAGGCCAGCCGGGACTACATACTGAGATCTTGTCTCAAGATTAACAAAACCCAAA
AGGTAGAGGCTCTTTCTTGGATGGACAAGCTGTGATGGAGGTTCTTTAGGAAATAGTCCT
GCCGTACGCATGTTTCTTGAGGCGGCTACATGAATGAGTA..........

No.	Exon / Intron	Start	End	Start Phase	End Phase	Length	Sequence
	5' upstream sequence						..........GTGGGTCTCAGAGGTTGAACTCAGGTTGTCGCGATTATACCTGCTGACTC ACCTTGCCAACACGATAAAGTATTCCCTATTTTAATGAAGGTGCGGTTAGGTTACTTGAA AGGAATATATGCCTACGAAAGTAAGTAATACACCAATACTTGTCAGAATCACCTAACATA GCGAAGTGGGGAGGAGCTGGTGGAACTGGGGAAGAGAAATTTGTGATCAAGATATATTGT ATGACCCAGTACTCGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCCTGGTC TACAAAGTGAGTTCCAGGACAGCCAGGGCTACACAGAGAAACTCTGTCTCGGAAAAACCA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGATATATTGTATGAATTTTTTTCAATAAAA AGAATCATATAATAGTAATACTATCGAGGGAATAGTGGTGGTAAGTGGAACTAAGTTATT TCTCATATTTCCATAAGGTAAAAGTTATGTTTTCAGGTGAGGCGGCACACGCTGGAGATT GCTGAGTTTGATGACAGCTCGGGCTACACTAACGAGTATTATGTAAGTCAGGATGACCGA AAAAGACGCTATCTAAAAAAAAAAAAAAAAAAAAAAAGTTGGAGAAGAAAAAAGAATTGT ATTTCTTGTTATGGAAAGGAAAATTTAATTGGATTATCAAAATTTTAAAAACAAAGCCTC CGATAGCAGAGGATGGTTTCGATCCATCGACCTCTGGGTTATGGGCCCAGCACGCTTCCG CTGCGCCACTCTGCTACCCACTGGTAGAACTCTCTTTTTTTCCATAGAAGAGCTTACCAT TCACCGCCTCAACTTCTGAACGCCCTCCGCTGTCAGTGGGGAAAATTGCCTTCATCCCTG TTATGTCTTCTTATTGGCTGGCTCCTTTACAGGGCATTTTTCATTGGTTGCTGCGTTAAC CAATAAACGCGCGGGACGGAGTGAGGCGGGAGCCTATCGCGCAGGCGTTT
1	EXON 1	90,476,147	90,476,245	-	2	99	GTTGGGACACGCCGGCCAGACGTTTCTCAGCCTGCCTAGTTCTTCCCAGCGAAGAGCGGT TGTGTGGCCTCCATTGTTCAGGATTAAGCGAGCCATGAG
	INTRON 1 - 2	90,476,246	90,477,004			759	GTAAGTGGACAGAGGTGCTTGAAAG..........GAGAGTAAAATGTATGTATTTTTAG
2	EXON 2	90,477,005	90,477,064	2	2	60	GGGTGACAGAGGACGTGGTCGTGGTGGGCGCTTTGGTTCCAGAGGAGGGCCTGGTGGAGG
	INTRON 2 - 3	90,477,065	90,477,319			255	GTGAGTGTGGCTGTTTGCATCTTTG..........ACTTTGGGTTGTTTTCATGTTTCAG
3	EXON 3	90,477,320	90,477,362	2	0	43	GTTCAGGCCTTTTGTGCCCCATATCCCATTTGATTTTTATTTG
	INTRON 3 - 4	90,477,363	90,480,603			3,241	GTGAGTATTTTGGCTTTGGAGGACT..........TAACATGATTTGATTTCTGGTCTAG
4	EXON 4	90,480,604	90,480,708	0	0	105	TGTGAAATGGCTTTTCCCCGGGTCAAGCCAGCACCTGATGAGACCTCCTTCAGTGAAGCC TTGCTGAAGAGGAATCAAGACCTTGCCCCTAATTCTGCTGAGCAG
	INTRON 4 - 5	90,480,709	90,480,992			284	GTATGTGCTTTCCTTGGGCTGTGTC..........TATTTTTGCTTTGTGATGTTTTCAG
5	EXON 5	90,480,993	90,481,070	0	0	78	GCTTCCATCCTTTCTTTGGTGACAAAAATCAACAATGTGATTGACAACTTGATTGTGGCC CCAGGAACATTTGAAGTG
	INTRON 5 - 6	90,481,071	90,481,363			293	GTGAGTTTTTGATGACTTAATTCTA..........ACTTACTTGAAATCCCTTTCAACAG
6	EXON 6	90,481,364	90,481,466	0	1	103	CAAATTGAAGAAGTCCGGCAGGTAGGATCATATAAAAAGGGAACAATGACTACAGGACAC AATGTGGCTGACCTGGTGGTAATACTAAAGATCCTGCCAACAT
	INTRON 6 - 7	90,481,467	90,482,776			1,310	GTAAGTGTATCTCTTATCTTTCTGC..........TTTATGTCCTTTTTCTCCAATCTAG
7	EXON 7	90,482,777	90,482,842	1	1	66	TGGAAGCTGTTGCTGCCCTGGGGAACAAAGTCGTGGAAAGCCTAAGGGCACAGGATCCCT CAGAAG
	INTRON 7 - 8	90,482,843	90,484,453			1,611	GTTTGAATTTGAGTTTGTTGCTAAA..........CATCTTGATTATTTTGTTCTTTTAG
8	EXON 8	90,484,454	90,484,570	1	1	117	TTTTGACCATGCTGACTAATGAAACTGGCTTTGAAATTAGCTCTTCTGATGCTACGGTGA AAATTCTCATTACAACAGTGCCCCCCAATCTCCGAAAACTGGATCCAGAACTCCATT
	INTRON 8 - 9	90,484,571	90,485,689			1,119	GTAAGTCTCCCCCCTCCCCATTGCT..........TTTAGCCTGTTGTACTTGTCTTCAG
9	EXON 9	90,485,690	90,485,768	1	2	79	TGGACATCAAGGTGTTGCAGAGCGCCTTAGCAGCCATCCGGCATGCCCGCTGGTTTGAAG AGAACGCTTCTCAGTCCAC
	INTRON 9 - 10	90,485,769	90,486,184			416	GTGAGTCTCATTGGTCGTTTGTATA..........CTTAATTCCTGGGTCTCTTATTCAG
10	EXON 10	90,486,185	90,486,272	2	0	88	AGTTAAAGTTCTCATAAGATTGCTAAAGGACTTACGGATTCGTTTTCCTGGCTTTGAGCC TCTCACACCCTGGATCCTTGACCTACTT
	INTRON 10 - 11	90,486,273	90,486,850			578	GTAAGTAAAAAGGGGATGCTGAGGG..........AGCTACCAGACTTACTCTCTTCCAG
11	EXON 11	90,486,851	90,486,912	0	2	62	GGGCACTATGCTGTAATGAACAACCCCACCAGACAGCCTTTGGCCCTGAATGTGGCTTAC AG
	INTRON 11 - 12	90,486,913	90,486,982			70	GTATAACACACTTCTCTGGGTTTCG..........CTTTCTAAGTGTCTTTGTGTTTCAG
12	EXON 12	90,486,983	90,487,097	2	0	115	GCGCTGCTTGCAGATTCTGGCTGCAGGACTGTTCTTGCCTGGGTCAGTGGGCATCACTGA CCCGTGTGAGAGTGGCAACTTCAGGGTACACACAGTTATGACCCTAGAACAACAG
	INTRON 12 - 13	90,487,098	90,487,226			129	GTATTAAGACAACCACGAAATGAGT..........TCATTTCCCTCTCCTTGTTCTTCAG
13	EXON 13	90,487,227	90,487,317	0	1	91	GATATGGTCTGCTACACAGCTCAGACTCTGGTTCGAATTCTCTCCCATGGAGGCTTTAGG AAGATCCTTGGCCAGGAGGGGGATGCCAGCT
	INTRON 13 - 14	90,487,318	90,487,458			141	GTAAGTTATCTCTGTGGTGTGGTTC..........TGGGTTTTATCCCTGTTTCTTCTAG
14	EXON 14	90,487,459	90,488,379	1	-	921	ATCTTGCTTCTGAAATATCTACCTGGGATGGAGTGATTGTGACACCTTCAGAAAAGGCTT ATGAGAAGCCACCTGAGAAGAAGGAGGGGGAGGAAGAGGAGGAGAACACAGAAGAACCAC CTCAAGGAGAAGAAGAAGAAAGCATGGAGACTCAGGAGTGACCTTCCCTTTACTGTTTCT CCCCAAGGGAAGAGAGGCTAAGCCAGCCACCATGGGGCTTTAGATGGCGGAATTTCTGTG GCATAGGGAGACAGCAGGAAGGGAAACAAACTGAAAAGAAAAAAACGCTACTGTTTCGAT AGTGGCCAAGCAGCTAGAAGTCTCCTATTTGTGACTGCGTATGCCCTCTGTCTGTCTGTA AGGAAGCAGAATGCCACACATTCCCAGTATTTAAACCTAACCACTCCCAACCAAGTACTT TGTGTTGAAATGCTGTAAACAGTCATTGAGTATCTGGGAATTTTTTTTTTTTTTTCTAAG AAAAATGATTAAAGTACTTCCTACTAGGGCTTTTGGTTTTATTTTTCTTCAATATGTAGC AACTACATTTGGCTTCTATAACCTCAGTAGAATTCAAGTTGAGTCTTTTATTATAAACAT TGAGATTGCTGTTTTAAATTATATAAATTGAAAGTAATAGATTCCTAGGATACCATTGTG ATGGTTAATTTCTTCAGCTTGGCCTAAAATAACCTGAATTTTCTGCAAAGGATTAACCCT AAATGTGGGGTGAAAGCATCTTATGAGCTCAGTGCATGGACAGAATAAAGGGATAAATGG CAGAGTCCAGCATTCCCTTCTCTTGGAAGCTTGATCACCTCACATTCTCATGTCTCAAAA TAGGCCCCAAAATATGCGTCAGTGTGACCATGTCCTGAACCCTTTGAAACCATAATAAAA TAAAATTTTTTGTTAAAATAA
	3' upstream sequence						CCAGTACAAGCATTTATTTAATAATGTTGAGCAATACTTAATATTAACATAGTCAAGCCA GGGTGGCCAAGAGGATAAATTATTTACCTTGACTTTACCTAAGTCCTCAGTTGTAAACAA AGTGGAGTTACAGGTAAAGGAAACTGCCCAGCCCCAGTAATAGGAGTAACAGGATGGTTA ACACTGGCTGGCTAAGCCTGGAAAGGATGGCGCTTAAATATGTAACTTTTAAATTTTATT TTATGAGGATGGTTGTTTTGCCTGCATATATATCTGCATCATATGTGTGTGTGTGCTGGG CCAAAAGGCCAGACAAGGGCATTGGGTTCCCCTGGAGCTGGAGTTAGAGGCTGCTGTGAG TCACCATGTGGGCGCTAAGCACTGGACGCCATCTGGAAGAATCACCAGTGTTCTTAACCA TTGAGCCATCCCTCTAGCCCTTAAAATATGTAGTCTAAACAAAAAAAAAAATCGCAAAAG CTTAGGACTCTTAGCTGTCAAGGCTCTAACTTGACCTTGGATCCTCGCTACCTGGCATGC TCTCCTTGGGTAGCAATGAAGGCAACAGTTGAGAAACTTGTTAATAGGAGTTAACCTAAA CATTATAGAGTGTAAGATGATCCTGGAAAGGTTATTACCTTCTGAGAGGAACTGTGGTGA AGCAGAGGGGGAGAAATAGGAGTATACTTTCTCACTAAATCTGGTGTTTTCTCAATTTTC TACCACACGATGCCTAATTTACTTAGTATTCTTTGGGGGAAATATATAGAGGCTTGAGCC CGGCACCCTGACACATGCCCATTATAATCCCAGCATTCAGGAGGCTAAGGCAAGAGGACA TGTTTGAGGCCAGCCGGGACTACATACTGAGATCTTGTCTCAAGATTAACAAAACCCAAA AGGTAGAGGCTCTTTCTTGGATGGACAAGCTGTGATGGAGGTTCTTTAGGAAATAGTCCT GCCGTACGCATGTTTCTTGAGGCGGCTACATGAATGAGTA..........

Sequence Detail Report

Gene Symbol (Gene ID)	Ilf2 (ENSMUSG00000001016)
Transcript ID	ENSMUST00000001042

		SNP Information
Strain :
Sequence Retrieve :
Exon translate : CDS Start ( 1 ) - End ( 391 ) -
Strand :	forward reverse
Show sequence :	nucleotide amino acid
Color information