MoG+ -Mouse Genome database with high added value-

Target CDS Information

Gene Symbol (Gene ID)

Cnot11 (ENSMUSG00000003135)

Cross Reference

CCDS	CCDS14906.1
EMBL	AK010503, AK144692, AK167440, ...show all
Fantom	2410015L18, G730023K10, I530014E21
GO	GO:0003674, GO:0005634, GO:0005737, ...show all
goslim_goa	GO:0003674, GO:0005575, GO:0005622, ...show all
MGI_trans_name	Cnot11-201
protein_id	AAH49091.1, AAH50812.1, BAB26988.1, ...show all
Reactome	R-MMU-429914, R-MMU-429947, R-MMU-74160
RefSeq_mRNA	NM_028043.2
RefSeq_peptide	NP_082319

UCSC	uc007ati.1
UniParc	UPI0000020CED
Uniprot/SWISSPROT	Q9CWN7

Definition

protein_id:ENSMUSP00000003219
translation:

MPGGGASTASGRLLSSADPRGAREAAAFRSGPAGSSGGRGGAGGPGPGIGGPAGRMSLTP
KELSSLLSIISEEAGGGSTFEGLSTAFHHYFSKADHFRLGSVLVMLLQQPDLLPSAAQRL
TALYLLWEMYRTEPLAANPFAASFAHLLNPAPPARGGQEPDRPPLSGFLPPITPPEKFFL
SQLMLAPPRELFKKTPRQIALMDVGNMGQSVDISGLQLALAERQSELPTQSKASFPSILS
DPDPDSSNSGFDSSVASRITESLVSGPKPPIESHFRPEFIRPPPPLHICEDELAWLNPTE
PEHAIQWDRSMCVKNSTGVEIKRIMAKAFKSPLSSPQQTQLLGELEKDPKLVYHIGLTPA
KLPDLVENNPLVAIEMLLKLMQSSQITEYFSVLVNMDMSLHSMEVVNRLTTAVDLPPEFI
HLYISNCISTCEQIKDKYMQNRLVRLVCVFLQSLIRNKIINVQDLFIEVQAFCIEFSRIR
EAAGLFRLLKTLDTGETPSETKISK

Chromosome

Length
Position(start - end)

9,426
39,535,839 - 39,545,266

Orient to Chromosome

plus

Link

Location : (1:39535839-39545266)
/

Detail Map

Polymorphisms Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Cnot11 (ENSMUSG00000003135)
Transcript ID	ENSMUST00000003219

Reports
substitution
cSNPs	3
Insertion	12
Deletion	15
SNPs	-1kb 39532290(c.-3549C>T), 39532429(c.-3410G>A), 39532568(c.-3271T>C), 39532869(c.-2970C>T), 39533848(c.-1991C>T), 39533938(c.-1901G>T), 39534303(c.-1536T>C), 39534344(c.-1495A>G), 39534351(c.-1488G>A), 39534686(c.-1153T>A), 39534689(c.-1150T>A), 39534692(c.-1147T>A), 39534695(c.-1144T>A), 39534954(c.-885T>C), 39535264(c.-575T>C), 39535297(c.-542T>A), 39535474(c.-365A>C), 39535571(c.-268G>T), 39535580(c.-259A>T), 39535632(c.-207C>A), 5'UTR CDS 39536243(c.405C>T), 39538344(c.738G>C), 39538404(c.798C>A), 3'UTR 39545417(c.151A>G), 39545843(c.577C>A), 39546180(c.914T>C), 39546219(c.953A>G), 39546257(c.991A>G), 39546258(c.992T>G), 39546720(c.1454G>A), 39546820(c.1554T>G), INTRON 39536356(c.499+19C>T), 39536592(c.499+255A>C), 39537184(c.500-232T>A), 39537253(c.500-163G>A), 39537275(c.500-141C>T), 39537277(c.500-139G>A), 39537387(c.500-29G>A), 39537769(c.664+189A>G), 39538029(c.665-242G>T), 39538460(c.817+37G>A), 39538484(c.817+61C>T), 39538779(c.817+356C>A), 39540118(c.1020+43T>C), 39540223(c.1020+148T>C), 39540381(c.1020+306G>A), 39540453(c.1020+378C>A), 39540865(c.1020+790G>A), 39540948(c.1020+873T>A), 39541241(c.1021-1159C>T), 39542034(c.1021-366G>C), 39542072(c.1021-328T>C), 39542754(c.1223+152A>G), 39542789(c.1223+187C>T), 39542884(c.1223+282C>T), 39542904(c.1223+302C>T), 39542922(c.1223+320G>T), 39543335(c.1223+733C>T), 39543712(c.1223+1110G>A), 39544076(c.1224-816C>T), 39544117(c.1224-775G>A), 39544300(c.1224-592G>T), +1kb 39547427(c.2161C>T), 39547462(c.2196G>A), 39547471(c.2205G>A), 39547499(c.2233G>A), 39548284(c.3018G>A), 39548529(c.3263A>G), 39548627(c.3361A>C), 39549401(c.4135C>A), 39549775(c.4509C>T), 39549908(c.4642A>G), 39550018(c.4752G>A), 39550021(c.4755G>A), 39550646(c.5380C>T), 39550706(c.5440C>T), 39550769(c.5503G>A), 39550775(c.5509G>C), 39550844(c.5578G>T), 39550983(c.5717G>A), 39551161(c.5895C>A), 39551545(c.6279C>G),
Insertions	-1kb 39534878 (c.-961_-960insC), 5'UTR CDS 3'UTR INTRON 39536489 (c.499+152_499+153insTCAG), 39536531 (c.499+195_499+196dupTT), 39537804 (c.664+224dupG), 39537859 (c.664+280_664+281insGGCTTAC), 39540895 (c.1020+820_1020+821insT), 39540994 (c.1020+919_1020+920insGGAA), 39543792 (c.1224-1099_1224-1098insTT), 39543856 (c.1224-1036_1224-1035insCA), 39544738 (c.1224-152dupT), +1kb 39547165 (c.1899_1900insA), 39548302 (c.3036_3037insG),
Deletions	-1kb 39531982 (c.-3856_-3855delTT), 39533233 (c.-2605_-2604delCT), 39534107 (c.-1731delA), 39534919 (c.-919delG), 39535182 (c.-656delT), 5'UTR CDS 3'UTR INTRON 39536391 (c.499+57_499+59delAGG), 39538603 (c.817+181_817+183delACA), 39539691 (c.818-173delG), 39541946 (c.1021-437_1021-436delTT), 39543045 (c.1223+449_1223+452delTCTT), +1kb 39547994 (c.2729_2737delACTGCATAT), 39549524 (c.4259_4261delCCC), 39550210 (c.4945_4948delCACA), 39550760 (c.5495_5498delGGTA), 39551692 (c.*6427delT),
coding sequence substitutions
premature termination by the nucleotide substitution	0
synonymous num	3
non-synonymous num	0
synonymous substitutions	39536243 (p.Leu135Leu), 39538344 (p.Ser246Ser), 39538404 (p.Gly266Gly),
non-synonymous substitutions
B6 transcript (ENSMUST00000003219)	MPGGGASTASGRLLSSADPRGAREAAAFRSGPAGSSGGRGGAGGPGPGIGGPAGRMSLTP KELSSLLSIISEEAGGGSTFEGLSTAFHHYFSKADHFRLGSVLVMLLQQPDLLPSAAQRL TALYLLWEMYRTEPLAANPFAASFAHLLNPAPPARGGQEPDRPPLSGFLPPITPPEKFFL SQLMLAPPRELFKKTPRQIALMDVGNMGQSVDISGLQLALAERQSELPTQSKASFPSILS DPDPDSSNSGFDSSVASRITESLVSGPKPPIESHFRPEFIRPPPPLHICEDELAWLNPTE PEHAIQWDRSMCVKNSTGVEIKRIMAKAFKSPLSSPQQTQLLGELEKDPKLVYHIGLTPA KLPDLVENNPLVAIEMLLKLMQSSQITEYFSVLVNMDMSLHSMEVVNRLTTAVDLPPEFI HLYISNCISTCEQIKDKYMQNRLVRLVCVFLQSLIRNKIINVQDLFIEVQAFCIEFSRIR EAAGLFRLLKTLDTGETPSETKISK*
MSMv4 transcript	MPGGGASTASGRLLSSADPRGAREAAAFRSGPAGSSGGRGGAGGPGPGIGGPAGRMSLTP KELSSLLSIISEEAGGGSTFEGLSTAFHHYFSKADHFRLGSVLVMLLQQPDLLPSAAQRL TALYLLWEMYRTEPLAANPFAASFAHLLNPAPPARGGQEPDRPPLSGFLPPITPPEKFFL SQLMLAPPRELFKKTPRQIALMDVGNMGQSVDISGLQLALAERQSELPTQSKASFPSILS DPDPDSSNSGFDSSVASRITESLVSGPKPPIESHFRPEFIRPPPPLHICEDELAWLNPTE PEHAIQWDRSMCVKNSTGVEIKRIMAKAFKSPLSSPQQTQLLGELEKDPKLVYHIGLTPA KLPDLVENNPLVAIEMLLKLMQSSQITEYFSVLVNMDMSLHSMEVVNRLTTAVDLPPEFI HLYISNCISTCEQIKDKYMQNRLVRLVCVFLQSLIRNKIINVQDLFIEVQAFCIEFSRIR EAAGLFRLLKTLDTGETPSETKISK*
homology	100.00 (506 / 506)

Exon Detail Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Cnot11 (ENSMUSG00000003135)
Transcript ID	ENSMUST00000003219


..........GGCCTTTAAAATATGCGCCATACCCATCACCTGTTCCTGAAGATTTCCTT
GAGAACTTCAGCGGTAAATAGAAAACTTTCAGCTGCCGAAGAGTTTTAGCACAGGGTAGC
TAGCAGGTGACGCTGATGACAGTCGCTCGGTTTCTGTAACTCCAGAGTGGATACTAGTCA
CCACCGGAGCATAGGGGTGGGGAGCGGGCAGCGGTGCCTTTGAAACAGATCACAGGGGAC
CAGGTCCAGGAGGCTGGTATGTAAAGAAATTTCCAGGGTTTTCCAGTGTTCAGCCAAGGC
GTCCAGAAAAAGTGCCCTAGGGCAGGCTAAGGAAAAAGAAGCACTGCAAACGATTTTGTA
AACGAATATTTCTCGAGACAGTTTTCTCAGATTTTTTTTTTTCTTTCTTTTTAGACCAGG
CTGGCCTCGAACTCACAGGGGTTCGTCTGCCTCTGCCTCCCTGGTGCCGGCCCCGCCTAG
ATTTTTGTTCACATAACCAAACGTTAATGTGCGGTACGACCCCATCTCTGAGAATACGAG
CAAGGCTCGAAATTTAAACTGTTTCTGAGAATCCTGTTTTCATTGGTATTTACAAGAAAT
GAGCCGTCAAGGATGCTCTATCAGACCAGTTAGCATCTAAGACCTAGTTTCCAAATTATA
ACTTAGGCAATATTGACTGGGCCGGTTTGGCGCCACCCTGTCACCCAAGGATCGCTTCTG
AGGGCTTTAAGGGCAATTAACGGCGGTCTCTACATCACTCAGGCAGGGAAGGACCACTCT
GACAGCTCTGAGACCACGCGGCCCCGCCCTCCACGGCGCCCCGCCCCCTTCCGGACACGG
AGCCCCGCCCACTCGCGTCTCCGGAACCTCCGCTCGGCCAGCGTCGTCGGTCTGTCGGCC
CTGTGTCTCCGTTCCGCTCGTCTGACTTAGGCACTGTTTTTGTTTGCGACGCTGTCGCGG
AAGGGTGCGCTTTACGGCCGCGGGAGGACGCAGCGAGTCGGCGCCTTGGG
CCTCTCGGCCGGGAAGCGGGGTAGGCGGGCGAGGTTGATGCCCGGCGGCGGGGCGAGCACGGCGTCTGGCCGGCTTCTCTCCTCAGCGGATCCCAGAGGGGCGCGGGAGGCAGCGGCGTTCCGGAGCGGCCCGGCGGGCTCGAGCGGAGGCCGAGGCGGAGCAGGCGGCCCTGGGCCAGGGATTGGAGGCCCCGCGGGCAGGATGAGCCTGACCCCGAAGGAGCTCTCGAGCCTGCTGAGCATCATCTCGGAGGAGGCGGGCGGCGGCAGCACCTTCGAGGGCCTGTCCACCGCCTTCCACCACTACTTCAGCAAGGCCGACCACTTCCGCCTGGGCTCGGTGCTGGTGATGCTGCTGCAGCAGCCGGACCTGCTGCCTAGCGCGGCGCAGCGCCTCACGGCGCTCTACCTGCTCTGGGAGATGTACCGCACCGAGCCGCTTGCCGCCAACCCGTTCGCGGCCAGCTTCGCGCACCTGCTCAACCCGGCGCCGCCCGCCCGCGGCGGCCAGGAGCCCGACCGGCCCCCGCTCTCAG
GTACGTCCCGCAGCCAGCTGTGCGG..........AACCGGCATGCATTCTTATTTGCAG
GGTTCCTGCCTCCTATAACTCCACCAGAAAAGTTTTTCCTCTCCCAGCTCATGCTGGCACCCCCAAGGGAACTGTTCAAAAAGACACCTCGCCAGATTGCCTTGATGGACGTTGGAAACATGGGACAGTCTGTGGACATTAGCGGCCTTCAGTTAGCCCTGGCAG
GTGAGGGAGGGCCAGTGATTGGGAC..........TGCTTCTTGTCTGAATCTGTTCCAG
AGCGTCAGTCTGAGCTGCCAACCCAGAGCAAAGCCAGCTTCCCAAGCATCCTCAGTGACCCAGACCCGGACTCCTCCAACTCTGGATTTGACAGCTCAGTTGCCTCTCGGATCACAGAGTCTTTAGTCAGTGGACCAAAGCCACCTATTGAAA
GTAGGTATATGGGGCTTAGTTCATG..........CAGTCATGTGTTACTCTCATTATAG
GCCACTTTCGACCAGAGTTTATCCGCCCACCACCCCCTCTCCACATCTGTGAGGATGAACTGGCCTGGCTAAATCCCACAGAACCCGAGCATGCCATCCAGTGGGACAGATCGATGTGTGTGAAGAATAGCACTGGTGTGGAGATCAAGCGGATCATGGCGAAAGCCTTCAAAAGCCCCCTGTCGTCTCCCCAACAGACACAG
GTATGTATGTATGTATGTATGTATG..........GAACCTCTCAACTTGTCTTTTTTAG
CTCCTCGGTGAGTTGGAAAAAGATCCCAAACTTGTTTATCACATTGGCCTTACTCCAGCGAAACTTCCAGATCTAGTGGAGAACAACCCTTTAGTCGCTATAGAAATGCTGCTGAAACTGATGCAGTCAAGCCAGATCACGGAGTATTTCTCTGTCCTGGTCAACATGGACATGTCCTTACATTCAATGGAAGTTGTAAATCG
GTAAGTTCTCATGTCCCACCAGAGC..........CTCAGATTTTTCTTTTGTGAAACAG
ACTAACTACAGCTGTTGACCTACCTCCTGAATTTATTCACCTATACATATCCAATTGCATTTCTACTTGTGAACAGATTAAGGATAAATATATGCAG
GTGAGTAATGTAAATGCTTATAACA..........AACTTGTTCCTTTTTTCTTTTCCAG
AATCGTTTGGTGCGTCTTGTGTGTGTGTTTCTCCAGTCTTTGATCCGTAACAAAATTATTAACGTGCAGGACTTGTTTATAGAAGTGCAGGCCTTCTGCATTGAATTTAGTAGGATACGGGAAGCTGCAGGCCTATTCCGGTTGCTGAAGACACTGGATACTGGGGAAACGCCTTCAGAGACCAAAATATCAAAATAATACCTCACTAGAACTTCCCTTTCTATTGTTCAACTGTATTTGGATTGGTTTTTAAACTTGTAACTCTTGAGTGGATTGCTTGATCTAAGAAATATAAATGACTTTATTTACTTAAAGTAAAATTTCCTTTTTCCTAGATGTTTCCCATGGGTGAATTTTGGTGAGAACTTGGGAGAAATGTTTATTTTAGCTCTCTTGCTGATGACAATCCATATGAATAGTTATTCTGAAAATAGTTATTGCAAGAAAGGTGTAGGTGTTGCTCTTTTGAATTTAAAACACAGTACCTGTTTCTTTTAGAAAACAAACTGTAGGTTTCTGAAAAACCAGGAATTTGCTTTCGTAGCTTCTAGTGTGAAGCATGGTCAGTGAGAGTGAGTGAAGACGCTGAGAATTTACGGTGAGCGTGGCTCTTAGTAAGCAAGGTGTGAAACAAGGATGCACATTTCTGACAACAGTGTTCCTGGCCCACTGACAAGCATGGGCACTCTGCCAGGCTGCGAGAGTTGGCATTTTATTCTTCTCTCTTAACCACAGTTAGTAAGGGTGTGGTTTTTGTGGTCTTAAGGACAAATAAGAGCTGGCACACCAGAAATGTATACCCAGGATGCCTGTTTGGTGAGGAGGTAGAAGAGTCAGTACCTGGGACAGTGTGCCTTAATTTTTTTTTTTTAAGACAGGGTCCATCTATGTAATTCTGGCGCTCACTATGTAGAGCAGGCTGGCCTTGAAATCAGAGATCCTTCTGCCTCTGCATGCTGTGATTAAAGGTGTATACCACCAAATCCAGCCTTTTTAAAAAATGTCTGACATACCATTTTATTTAAAGAAATTATGAAGAATTCCTTTTATGGAGATATCTCTAGAACCGATTTATGGGGACAGAATCTGTTCTCCCACATCCGGCAAGGCTCAAAGGAAGCCAAGCTTGGTGATTTTGTCTTACTGTACAGTTACAATCTCCTAACAGTGGAGAAGGAACAAGAAACAGGAATCCTTGCGCCCCTGTGGGAGTGACCCCCTCTGAACTAGAGAGCTGACTCCTCTCAATGCTCTGTAGTGGCCACTGCTATTTTACAGATGGCACTGGGCCAACAACAGCCCATGAACAAAGCACTGTTTTAGAATGACAAGTTTCAAAGACTTACTGTGGGCAACAAGCTCCACAGCTGATAGGCATGTCTTGTAGCTCAGGTTAGCTATGGCCACAGCCCAACACAAAATAAAAAATGTAATTAAAATGACAGTAGCCAGATGCAGATACTCCCAACCATTGGACTGAAGTTGGGGACCCCTATGGTTGGATTAGAGGAAGGATTGAAGAAGCTGAAGGGGAGGACCAACCCATAGGAAGACCAGTGTTCTCAACTAAACCCGACCCCTGGGAGCTCCCGAAGACTGAGCCACCAACCAAGCAGTACCATGGCTGATCCAAGCACATACACAGCAGAGGACTGCCTGGTCTGGCCTCTGGGAGAAGATGCACTCGATCCTTTAGAGACTTGAGGCCTCTGGGAAGGGGGGAGGTGGGGCGGGGCACAGAACCTTGGGGGGGGGGGTAGGAGTGGGATGGGGGAGCAACAGCTGAAATGTAAATAAAATAATTT
ACAAAAAAGGAAAAAATATTAGAGTTTATATTATTTAGGGGGAGGTTATACGTGTGCATT
TATTTCTAAAAGTTGGTTGTGTGGCTTTTGAGCATGTATTTCGTAGATGACAAGTATCCT
ATCAAGATGTCCATGAGTAAACACTTTTACTCTGCAGCCAACAAGGACTCAAGTGGGATC
CATGAACAAAACCCCCTAGGGCTTATTTAGCATATATTTTGTCCATAAAGCCTGTCACAG
CCTCATTAAGCTTACAACAGGAGATGGTAATCCATTATATGTTTGTTCATTTAAAAAAAA
ATGTACTTGTCAAGACAAACACAGCTGCCGCAAAAAGGCACAAGCAACTCAAAGTTTTCA
TACTTCTATCTAAAAACAAGGAGAATTGCAAGTTGTCTGTTGATTTTAGAATCCCAAACA
AATGTCTCAAATGAGGACCTGAAAATGAGGAAGGTCAAGATCACAGTCTTGATGTTCACT
AGGAAAATGAAGACTGTTCACAAAGAGAAGCTGTGCTTGGCAAACATTAGCTGTACATAA
ATCAAGGTTAGAATGCCACTAGATGGCTCTTGGTTTAGTATGTGTAAAAGACAAGGTACA
CTGGTGCAGCCCTGTAATCTCAGCTACAGCCTGATTGTTTTAACCCAGAAAGTTAAGGGT
AGCCTGGGCAACAAGATATATAATCTTGAGACTGAATAACCACAATCAACTTTTAAGTTT
ATTAATTGAGTTTAATAAAGGTTATAACTTCATCGAAGTTTTTTATCCAACTTAAGTCTT
CGAATCACCTGTTCAAAGAAAAGAACATTAATCAGTAACATTTTAAGATTAGAACATTTT
AACACTTTGGAATCCCAAAATATAATCACTTAAATAATTCAACACTAACTTATTACTGAT
TTAATTAAGCAACTTTACAGAAGACCACTAAATCTATAGGGATGATCTCATTTACACCTA
ATTTTAAGTAGCACACTCCTTTCTATATTAATTAGTTGTG..........

No.	Exon / Intron	Start	End	Start Phase	End Phase	Length	Sequence
	5' upstream sequence						..........GGCCTTTAAAATATGCGCCATACCCATCACCTGTTCCTGAAGATTTCCTT GAGAACTTCAGCGGTAAATAGAAAACTTTCAGCTGCCGAAGAGTTTTAGCACAGGGTAGC TAGCAGGTGACGCTGATGACAGTCGCTCGGTTTCTGTAACTCCAGAGTGGATACTAGTCA CCACCGGAGCATAGGGGTGGGGAGCGGGCAGCGGTGCCTTTGAAACAGATCACAGGGGAC CAGGTCCAGGAGGCTGGTATGTAAAGAAATTTCCAGGGTTTTCCAGTGTTCAGCCAAGGC GTCCAGAAAAAGTGCCCTAGGGCAGGCTAAGGAAAAAGAAGCACTGCAAACGATTTTGTA AACGAATATTTCTCGAGACAGTTTTCTCAGATTTTTTTTTTTCTTTCTTTTTAGACCAGG CTGGCCTCGAACTCACAGGGGTTCGTCTGCCTCTGCCTCCCTGGTGCCGGCCCCGCCTAG ATTTTTGTTCACATAACCAAACGTTAATGTGCGGTACGACCCCATCTCTGAGAATACGAG CAAGGCTCGAAATTTAAACTGTTTCTGAGAATCCTGTTTTCATTGGTATTTACAAGAAAT GAGCCGTCAAGGATGCTCTATCAGACCAGTTAGCATCTAAGACCTAGTTTCCAAATTATA ACTTAGGCAATATTGACTGGGCCGGTTTGGCGCCACCCTGTCACCCAAGGATCGCTTCTG AGGGCTTTAAGGGCAATTAACGGCGGTCTCTACATCACTCAGGCAGGGAAGGACCACTCT GACAGCTCTGAGACCACGCGGCCCCGCCCTCCACGGCGCCCCGCCCCCTTCCGGACACGG AGCCCCGCCCACTCGCGTCTCCGGAACCTCCGCTCGGCCAGCGTCGTCGGTCTGTCGGCC CTGTGTCTCCGTTCCGCTCGTCTGACTTAGGCACTGTTTTTGTTTGCGACGCTGTCGCGG AAGGGTGCGCTTTACGGCCGCGGGAGGACGCAGCGAGTCGGCGCCTTGGG
1	EXON 1	39,535,802	39,536,337	-	1	536	CCTCTCGGCCGGGAAGCGGGGTAGGCGGGCGAGGTTGATGCCCGGCGGCGGGGCGAGCAC GGCGTCTGGCCGGCTTCTCTCCTCAGCGGATCCCAGAGGGGCGCGGGAGGCAGCGGCGTT CCGGAGCGGCCCGGCGGGCTCGAGCGGAGGCCGAGGCGGAGCAGGCGGCCCTGGGCCAGG GATTGGAGGCCCCGCGGGCAGGATGAGCCTGACCCCGAAGGAGCTCTCGAGCCTGCTGAG CATCATCTCGGAGGAGGCGGGCGGCGGCAGCACCTTCGAGGGCCTGTCCACCGCCTTCCA CCACTACTTCAGCAAGGCCGACCACTTCCGCCTGGGCTCGGTGCTGGTGATGCTGCTGCA GCAGCCGGACCTGCTGCCTAGCGCGGCGCAGCGCCTCACGGCGCTCTACCTGCTCTGGGA GATGTACCGCACCGAGCCGCTTGCCGCCAACCCGTTCGCGGCCAGCTTCGCGCACCTGCT CAACCCGGCGCCGCCCGCCCGCGGCGGCCAGGAGCCCGACCGGCCCCCGCTCTCAG
	INTRON 1 - 2	39,536,338	39,537,415			1,078	GTACGTCCCGCAGCCAGCTGTGCGG..........AACCGGCATGCATTCTTATTTGCAG
2	EXON 2	39,537,416	39,537,580	1	1	165	GGTTCCTGCCTCCTATAACTCCACCAGAAAAGTTTTTCCTCTCCCAGCTCATGCTGGCAC CCCCAAGGGAACTGTTCAAAAAGACACCTCGCCAGATTGCCTTGATGGACGTTGGAAACA TGGGACAGTCTGTGGACATTAGCGGCCTTCAGTTAGCCCTGGCAG
	INTRON 2 - 3	39,537,581	39,538,270			690	GTGAGGGAGGGCCAGTGATTGGGAC..........TGCTTCTTGTCTGAATCTGTTCCAG
3	EXON 3	39,538,271	39,538,423	1	1	153	AGCGTCAGTCTGAGCTGCCAACCCAGAGCAAAGCCAGCTTCCCAAGCATCCTCAGTGACC CAGACCCGGACTCCTCCAACTCTGGATTTGACAGCTCAGTTGCCTCTCGGATCACAGAGT CTTTAGTCAGTGGACCAAAGCCACCTATTGAAA
	INTRON 3 - 4	39,538,424	39,539,872			1,449	GTAGGTATATGGGGCTTAGTTCATG..........CAGTCATGTGTTACTCTCATTATAG
4	EXON 4	39,539,873	39,540,075	1	0	203	GCCACTTTCGACCAGAGTTTATCCGCCCACCACCCCCTCTCCACATCTGTGAGGATGAAC TGGCCTGGCTAAATCCCACAGAACCCGAGCATGCCATCCAGTGGGACAGATCGATGTGTG TGAAGAATAGCACTGGTGTGGAGATCAAGCGGATCATGGCGAAAGCCTTCAAAAGCCCCC TGTCGTCTCCCCAACAGACACAG
	INTRON 4 - 5	39,540,076	39,542,399			2,324	GTATGTATGTATGTATGTATGTATG..........GAACCTCTCAACTTGTCTTTTTTAG
5	EXON 5	39,542,400	39,542,602	0	2	203	CTCCTCGGTGAGTTGGAAAAAGATCCCAAACTTGTTTATCACATTGGCCTTACTCCAGCG AAACTTCCAGATCTAGTGGAGAACAACCCTTTAGTCGCTATAGAAATGCTGCTGAAACTG ATGCAGTCAAGCCAGATCACGGAGTATTTCTCTGTCCTGGTCAACATGGACATGTCCTTA CATTCAATGGAAGTTGTAAATCG
	INTRON 5 - 6	39,542,603	39,544,891			2,289	GTAAGTTCTCATGTCCCACCAGAGC..........CTCAGATTTTTCTTTTGTGAAACAG
6	EXON 6	39,544,892	39,544,988	2	0	97	ACTAACTACAGCTGTTGACCTACCTCCTGAATTTATTCACCTATACATATCCAATTGCAT TTCTACTTGTGAACAGATTAAGGATAAATATATGCAG
	INTRON 6 - 7	39,544,989	39,545,068			80	GTGAGTAATGTAAATGCTTATAACA..........AACTTGTTCCTTTTTTCTTTTCCAG
7	EXON 7	39,545,069	39,546,873	0	-	1,805	AATCGTTTGGTGCGTCTTGTGTGTGTGTTTCTCCAGTCTTTGATCCGTAACAAAATTATT AACGTGCAGGACTTGTTTATAGAAGTGCAGGCCTTCTGCATTGAATTTAGTAGGATACGG GAAGCTGCAGGCCTATTCCGGTTGCTGAAGACACTGGATACTGGGGAAACGCCTTCAGAG ACCAAAATATCAAAATAATACCTCACTAGAACTTCCCTTTCTATTGTTCAACTGTATTTG GATTGGTTTTTAAACTTGTAACTCTTGAGTGGATTGCTTGATCTAAGAAATATAAATGAC TTTATTTACTTAAAGTAAAATTTCCTTTTTCCTAGATGTTTCCCATGGGTGAATTTTGGT GAGAACTTGGGAGAAATGTTTATTTTAGCTCTCTTGCTGATGACAATCCATATGAATAGT TATTCTGAAAATAGTTATTGCAAGAAAGGTGTAGGTGTTGCTCTTTTGAATTTAAAACAC AGTACCTGTTTCTTTTAGAAAACAAACTGTAGGTTTCTGAAAAACCAGGAATTTGCTTTC GTAGCTTCTAGTGTGAAGCATGGTCAGTGAGAGTGAGTGAAGACGCTGAGAATTTACGGT GAGCGTGGCTCTTAGTAAGCAAGGTGTGAAACAAGGATGCACATTTCTGACAACAGTGTT CCTGGCCCACTGACAAGCATGGGCACTCTGCCAGGCTGCGAGAGTTGGCATTTTATTCTT CTCTCTTAACCACAGTTAGTAAGGGTGTGGTTTTTGTGGTCTTAAGGACAAATAAGAGCT GGCACACCAGAAATGTATACCCAGGATGCCTGTTTGGTGAGGAGGTAGAAGAGTCAGTAC CTGGGACAGTGTGCCTTAATTTTTTTTTTTTAAGACAGGGTCCATCTATGTAATTCTGGC GCTCACTATGTAGAGCAGGCTGGCCTTGAAATCAGAGATCCTTCTGCCTCTGCATGCTGT GATTAAAGGTGTATACCACCAAATCCAGCCTTTTTAAAAAATGTCTGACATACCATTTTA TTTAAAGAAATTATGAAGAATTCCTTTTATGGAGATATCTCTAGAACCGATTTATGGGGA CAGAATCTGTTCTCCCACATCCGGCAAGGCTCAAAGGAAGCCAAGCTTGGTGATTTTGTC TTACTGTACAGTTACAATCTCCTAACAGTGGAGAAGGAACAAGAAACAGGAATCCTTGCG CCCCTGTGGGAGTGACCCCCTCTGAACTAGAGAGCTGACTCCTCTCAATGCTCTGTAGTG GCCACTGCTATTTTACAGATGGCACTGGGCCAACAACAGCCCATGAACAAAGCACTGTTT TAGAATGACAAGTTTCAAAGACTTACTGTGGGCAACAAGCTCCACAGCTGATAGGCATGT CTTGTAGCTCAGGTTAGCTATGGCCACAGCCCAACACAAAATAAAAAATGTAATTAAAAT GACAGTAGCCAGATGCAGATACTCCCAACCATTGGACTGAAGTTGGGGACCCCTATGGTT GGATTAGAGGAAGGATTGAAGAAGCTGAAGGGGAGGACCAACCCATAGGAAGACCAGTGT TCTCAACTAAACCCGACCCCTGGGAGCTCCCGAAGACTGAGCCACCAACCAAGCAGTACC ATGGCTGATCCAAGCACATACACAGCAGAGGACTGCCTGGTCTGGCCTCTGGGAGAAGAT GCACTCGATCCTTTAGAGACTTGAGGCCTCTGGGAAGGGGGGAGGTGGGGCGGGGCACAG AACCTTGGGGGGGGGGGTAGGAGTGGGATGGGGGAGCAACAGCTGAAATGTAAATAAAAT AATTT
	3' upstream sequence						ACAAAAAAGGAAAAAATATTAGAGTTTATATTATTTAGGGGGAGGTTATACGTGTGCATT TATTTCTAAAAGTTGGTTGTGTGGCTTTTGAGCATGTATTTCGTAGATGACAAGTATCCT ATCAAGATGTCCATGAGTAAACACTTTTACTCTGCAGCCAACAAGGACTCAAGTGGGATC CATGAACAAAACCCCCTAGGGCTTATTTAGCATATATTTTGTCCATAAAGCCTGTCACAG CCTCATTAAGCTTACAACAGGAGATGGTAATCCATTATATGTTTGTTCATTTAAAAAAAA ATGTACTTGTCAAGACAAACACAGCTGCCGCAAAAAGGCACAAGCAACTCAAAGTTTTCA TACTTCTATCTAAAAACAAGGAGAATTGCAAGTTGTCTGTTGATTTTAGAATCCCAAACA AATGTCTCAAATGAGGACCTGAAAATGAGGAAGGTCAAGATCACAGTCTTGATGTTCACT AGGAAAATGAAGACTGTTCACAAAGAGAAGCTGTGCTTGGCAAACATTAGCTGTACATAA ATCAAGGTTAGAATGCCACTAGATGGCTCTTGGTTTAGTATGTGTAAAAGACAAGGTACA CTGGTGCAGCCCTGTAATCTCAGCTACAGCCTGATTGTTTTAACCCAGAAAGTTAAGGGT AGCCTGGGCAACAAGATATATAATCTTGAGACTGAATAACCACAATCAACTTTTAAGTTT ATTAATTGAGTTTAATAAAGGTTATAACTTCATCGAAGTTTTTTATCCAACTTAAGTCTT CGAATCACCTGTTCAAAGAAAAGAACATTAATCAGTAACATTTTAAGATTAGAACATTTT AACACTTTGGAATCCCAAAATATAATCACTTAAATAATTCAACACTAACTTATTACTGAT TTAATTAAGCAACTTTACAGAAGACCACTAAATCTATAGGGATGATCTCATTTACACCTA ATTTTAAGTAGCACACTCCTTTCTATATTAATTAGTTGTG..........

Sequence Detail Report

Gene Symbol (Gene ID)	Cnot11 (ENSMUSG00000003135)
Transcript ID	ENSMUST00000003219

		SNP Information
Strain :
Sequence Retrieve :
Exon translate : CDS Start ( 1 ) - End ( 506 ) -
Strand :	forward reverse
Show sequence :	nucleotide amino acid
Color information