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Target CDS Information

Gene Symbol (Gene ID) Myo1b (ENSMUSG00000018417)
Cross Reference
CCDS CCDS48254.1
EMBL AC108840, AC123555, AC138680, ...show all
GO GO:0000146, GO:0000146, GO:0005524, ...show all
goslim_goa GO:0003674, GO:0005575, GO:0005576, ...show all
MGI_trans_name Myo1b-002
OTTP OTTMUSP00000017715
OTTT OTTMUST00000039700
protein_id AAH54786.1
RefSeq_mRNA NM_001161817.2
RefSeq_mRNA_predicted XM_006495764.1
RefSeq_peptide NP_001155289
RefSeq_peptide_predicted XP_006495827.1, XP_006495828.1
UCSC uc007axs.3
UniParc UPI00001B0770
Uniprot/SPTREMBL Q7TQD7
Vega_transcript Myo1b-002, OTTMUST00000039700
Vega_translation 179229, OTTMUSP00000017715
Definition protein_id:ENSMUSP00000018561
translation:
MAKMEVKSSLLDNMIGVGDMVLLEPLNEETFIDNLKKRFDHNEIYTYIGSVVISVNPYRS
LPIYSPEKVEDYRNRNFYELSPHIFALSDEAYRSLRDQDKDQCILITGESGAGKTEASKL
VMSYVAAVCGKGAEVNQVKEQLLQSNPVLEAFGNAKTVRNDNSSRFGKYMDIEFDFKGDP
LGGVISNYLLEKSRVVKQPRGERNFHVFYQLLSGASEELLYKLKLERDFSRYNYLSLDSA
KVNGVDDAANFRTVRNAMQIVGFLDHEAEAVLEVVAAVLKLGNIEFKPESRVNGLDESKI
KDKNELKEICELTSIDQVVLERAFSFRTVEAKQEKVSTTLNVAQAYYARDALAKNLYSRL
FSWLVNRINESIKAQTKVRKKVMGVLDIYGFEIFEDNSFEQFIINYCNEKLQQIFIELTL
KEEQEEYIREDIEWTHIDYFNNAIICDLIENNTNGILAMLDEECLRPGTVTDETFLEKLN
QVCATHQHFESRMSKCSRFLNDTTLPHSCFRIQHYAGKVLYQVEGFVDKNNDLLYRDLSQ
AMWKAGHSLIKSLFPEGNPAKVNLKRPPTAGSQFKASVATLMRNLQTKNPNYIRCIKPND
KKAAHIFNESLVCHQIRYLGLLENVRVRRAGYAFRQAYEPCLERYKMLCKQTWPHWKGPA
RSGVEVLFNELEIPVEEHSFGRSKIFIRNPRTLFQLEDLRKQRLEDLATLIQKIYRGWKC
RTHFLLMKRSQVVIAAWYRRYAQQKRYQQIKSSALVIQSYIRGWKARKILRELKHQKRCK
EAATTIAAYWHGTQARRELRRLKDEARNKHAIAVIWAYWLGSKARRELKRLKEEARRKHA
VAVIWAYWLGLKVRREYRKFFRANAGKKIYEFTLQRIVQKYLLEMKNKMPSLSPIDKNWP
SRPYLFLDSTHKELKRIFHLWRCKKYRDQFTDQQKLIYEEKLEASELFKDKKALYPSSVG
QPFQGAYLEINKNPKYKKLKDAIEEKIIIAEVVNKINRANGKSTSRIFLLTNNNLLLADQ
KSGQIKSEVPLVDVTKVSMSSQNDGFFAVHLKEGSEAASKGDFLFSSDHLIEMATKLYRT
TLSQTKQKLNIEISDEFLVQFRQDKVCVKFIQGNQKNGSVPTCKRKNNRLLEVAVP

Chromosome 1
Length
Position(start - end)
132,043
51,751,173 - 51,883,217
Orient to Chromosome minus
Link Location : (1:51751173-51883217)
/

Detail Map


 

Report

Polymorphisms Report

Target Strain  MSMv4  JF1v3  KJRv1  SWNv1  CHDv1  NJLv1  BLG2v1  HMIv1  BFMv1  PGN2v1
Gene Symbol (Gene ID) Myo1b (ENSMUSG00000018417)
Transcript ID ENSMUST00000018561
Reports
substitution
cSNPs13
Insertion120
Deletion139
SNPs
+1kb
5'UTR
CDS
3'UTR
INTRON
-1kb
Insertions
+1kb
5'UTR
CDS
3'UTR
INTRON
-1kb
Deletions
+1kb
5'UTR
CDS
3'UTR
INTRON
-1kb
coding sequence substitutions
premature termination by the nucleotide substitution0
synonymous num12
non-synonymous num1
synonymous substitutions 51751275 (p.Gln1103Gln), 51755648 (p.Ser1094Ser), 51770807 (p.Gln758Gln), 51773299 (p.Cys720Cys), 51776314 (p.Asn624Asn), 51778374 (p.Ala576Ala), 51778467 (p.Ala545Ala), 51779606 (p.Thr503Thr), 51784497 (p.Lys410Lys), 51784530 (p.Phe399Phe), 51797062 (p.Ala323Ala), 51799577 (p.Ala240Ala),
non-synonymous substitutions 51760364 (p.Lys935Arg),
B6 transcript
(ENSMUST00000018561)
MAKMEVKSSLLDNMIGVGDMVLLEPLNEETFIDNLKKRFDHNEIYTYIGSVVISVNPYRS
LPIYSPEKVEDYRNRNFYELSPHIFALSDEAYRSLRDQDKDQCILITGESGAGKTEASKL
VMSYVAAVCGKGAEVNQVKEQLLQSNPVLEAFGNAKTVRNDNSSRFGKYMDIEFDFKGDP
LGGVISNYLLEKSRVVKQPRGERNFHVFYQLLSGASEELLYKLKLERDFSRYNYLSLDSA
KVNGVDDAANFRTVRNAMQIVGFLDHEAEAVLEVVAAVLKLGNIEFKPESRVNGLDESKI
KDKNELKEICELTSIDQVVLERAFSFRTVEAKQEKVSTTLNVAQAYYARDALAKNLYSRL
FSWLVNRINESIKAQTKVRKKVMGVLDIYGFEIFEDNSFEQFIINYCNEKLQQIFIELTL
KEEQEEYIREDIEWTHIDYFNNAIICDLIENNTNGILAMLDEECLRPGTVTDETFLEKLN
QVCATHQHFESRMSKCSRFLNDTTLPHSCFRIQHYAGKVLYQVEGFVDKNNDLLYRDLSQ
AMWKAGHSLIKSLFPEGNPAKVNLKRPPTAGSQFKASVATLMRNLQTKNPNYIRCIKPND
KKAAHIFNESLVCHQIRYLGLLENVRVRRAGYAFRQAYEPCLERYKMLCKQTWPHWKGPA
RSGVEVLFNELEIPVEEHSFGRSKIFIRNPRTLFQLEDLRKQRLEDLATLIQKIYRGWKC
RTHFLLMKRSQVVIAAWYRRYAQQKRYQQIKSSALVIQSYIRGWKARKILRELKHQKRCK
EAATTIAAYWHGTQARRELRRLKDEARNKHAIAVIWAYWLGSKARRELKRLKEEARRKHA
VAVIWAYWLGLKVRREYRKFFRANAGKKIYEFTLQRIVQKYLLEMKNKMPSLSPIDKNWP
SRPYLFLDSTHKELKRIFHLWRCKKYRDQFTDQQKLIYEEKLEASELFKDKKALYPSSVG
QPFQGAYLEINKNPKYKKLKDAIEEKIIIAEVVNKINRANGKSTSRIFLLTNNNLLLADQ
KSGQIKSEVPLVDVTKVSMSSQNDGFFAVHLKEGSEAASKGDFLFSSDHLIEMATKLYRT
TLSQTKQKLNIEISDEFLVQFRQDKVCVKFIQGNQKNGSVPTCKRKNNRLLEVAVP*
MSMv4 transcript
MAKMEVKSSLLDNMIGVGDMVLLEPLNEETFIDNLKKRFDHNEIYTYIGSVVISVNPYRS
LPIYSPEKVEDYRNRNFYELSPHIFALSDEAYRSLRDQDKDQCILITGESGAGKTEASKL
VMSYVAAVCGKGAEVNQVKEQLLQSNPVLEAFGNAKTVRNDNSSRFGKYMDIEFDFKGDP
LGGVISNYLLEKSRVVKQPRGERNFHVFYQLLSGASEELLYKLKLERDFSRYNYLSLDSA
KVNGVDDAANFRTVRNAMQIVGFLDHEAEAVLEVVAAVLKLGNIEFKPESRVNGLDESKI
KDKNELKEICELTSIDQVVLERAFSFRTVEAKQEKVSTTLNVAQAYYARDALAKNLYSRL
FSWLVNRINESIKAQTKVRKKVMGVLDIYGFEIFEDNSFEQFIINYCNEKLQQIFIELTL
KEEQEEYIREDIEWTHIDYFNNAIICDLIENNTNGILAMLDEECLRPGTVTDETFLEKLN
QVCATHQHFESRMSKCSRFLNDTTLPHSCFRIQHYAGKVLYQVEGFVDKNNDLLYRDLSQ
AMWKAGHSLIKSLFPEGNPAKVNLKRPPTAGSQFKASVATLMRNLQTKNPNYIRCIKPND
KKAAHIFNESLVCHQIRYLGLLENVRVRRAGYAFRQAYEPCLERYKMLCKQTWPHWKGPA
RSGVEVLFNELEIPVEEHSFGRSKIFIRNPRTLFQLEDLRKQRLEDLATLIQKIYRGWKC
RTHFLLMKRSQVVIAAWYRRYAQQKRYQQIKSSALVIQSYIRGWKARKILRELKHQKRCK
EAATTIAAYWHGTQARRELRRLKDEARNKHAIAVIWAYWLGSKARRELKRLKEEARRKHA
VAVIWAYWLGLKVRREYRKFFRANAGKKIYEFTLQRIVQKYLLEMKNKMPSLSPIDKNWP
SRPYLFLDSTHKELKRIFHLWRCKKYRDQFTDQQRLIYEEKLEASELFKDKKALYPSSVG
QPFQGAYLEINKNPKYKKLKDAIEEKIIIAEVVNKINRANGKSTSRIFLLTNNNLLLADQ
KSGQIKSEVPLVDVTKVSMSSQNDGFFAVHLKEGSEAASKGDFLFSSDHLIEMATKLYRT
TLSQTKQKLNIEISDEFLVQFRQDKVCVKFIQGNQKNGSVPTCKRKNNRLLEVAVP*
homology99.91 (1137 / 1137)

Exon Detail Report

Target Strain  MSMv4  JF1v3  KJRv1  SWNv1  CHDv1  NJLv1  BLG2v1  HMIv1  BFMv1  PGN2v1
Gene Symbol (Gene ID) Myo1b (ENSMUSG00000018417)
Transcript ID ENSMUST00000018561
No. Exon / Intron Start End Start Phase End Phase Length Sequence
5' upstream sequence
..........CTTACCTCACAGGTTTTTGTGAAGATTAAATAAAATTGTATCCACTACTC
AAAATATGTTAGCTTAAACCATTACCACGCCGACTGAAGACCTAACTGATGCTGGTTCCG
TCAATGATGCTAGAATTCCCAGCAGGTCAGTTGGTAGAGGAGGGTCTTGGTAGCCTCTGA
GAAGTCCTGGGGCCTGTGCTGGAGGGACAGAGTGACTATATAAGGTTGGAAATCTTTGGT
TCGCCTCCTTTCAGTGACAGTATCCAGATATAGGTCAGTGCACTTAAACCTGGCCCCATT
TATGGCAATTTATTTCATTATAGGATAAAGTCGTCAGATTCATGAGTAATAATTACTGTG
TCTGCCGCGCTTTTAACACCCCAGCCATGTAATCCTCACCTCACCCCATGAGTAAGTTTG
ATGAACACCCTTACCTCTTCCAGGAACAAGCCAGACCCAGGGTCATGTGGCTTGTCCCGA
ATCCCAGCGTGGTGAAGACACCTGGAGTGAGAAGCTGGGAGTCCTGAGTCTTCAGACCCT
CTATCATGGCCAAGTGATTGCCAGTCATTGCTCAGTACCTAATGGTATATTCAATATATA
TGTCAGTGACAGAGACAATAAAAGCCTCACATGGCAGGCCATTTTCTCTTCCATTAAATT
GTCATTTTGTGATATTTTTGGGCACCCAAACTTGGACCTAGGAGGGTAGGCAATGTGGAG
AAGAATATTCTCTTTGCTGGGGTTCGCGCCCAGGCTCTTGCAGCTGTTCGGCTCTGCATC
TCTGGTCTGCAGTTCGCGGATCATGCAGTGGCCAAGGTGAAGGGCCAGTGCGCTTTCCTG
GGTGTCCCCGCCCGCCGGGTGCTCACCGGGGGGCGCTGTGCGGCCTGCGCGCCTGGGTGA
ACCGCGGCCAGGGAGCGAGGGGCGCGTCCGGGCGGTGAGGTCGCCGCCCCCGCCGGGAGA
GGGGAGTGGCCGCGCCGCCGCCGCGCCTCAAGCCAGCGCACTCGGAGCCC
1 EXON 1 51,915,761 51,915,928 - - 168
AGCCGGCGGACGCGGTGTGGGTGCACGGAACGCACGGTCGGCTGAGCGGCGCGGGATCCC
CGGCAGCAACTGTGGCACAAGCCCCGCATCGGATCTGACCCGCGTTCCCCAGGCGGCGGC
CAGCGAGCAGCACGCGGAGACGGAGTGGCCGAGCGGTTGCCGGGCGAG
INTRON 1 - 2 51,883,227 51,915,760 32,534
GTACGCTGCACTCCCCCGTGCCGGC..........CCTGACTTCTTCTTTTTTCTTCCAG
2 EXON 2 51,883,083 51,883,226 - 0 144
CTGGAAACCATGGCCAAAATGGAGGTGAAATCCTCACTTCTGGACAATATGATCGGTGTT
GGAGATATGGTTCTTTTAGAGCCGCTCAATGAGGAGACGTTCATCGACAACCTGAAGAAG
CGCTTCGACCACAATGAGATATAT
INTRON 2 - 3 51,863,435 51,883,082 19,648
GTGAGTACCTGGAGGCTTTTCTGCC..........TTCTTTCTTTTTCTCTTATTTGCAG
3 EXON 3 51,863,319 51,863,434 0 2 116
ACATACATTGGGAGCGTGGTTATATCTGTTAACCCCTACCGGTCCTTGCCCATATATTCG
CCGGAGAAAGTGGAAGATTACAGAAATAGAAACTTCTATGAACTGAGCCCTCACAT
INTRON 3 - 4 51,834,544 51,863,318 28,775
GTAAGTACAGCTAGCAAACTCTTAA..........ATCCTCCCACATTTTTTTCTTGTAG
4 EXON 4 51,834,449 51,834,543 2 1 95
CTTTGCTTTGTCGGATGAAGCATACAGATCCCTCCGTGATCAAGATAAAGATCAATGCAT
TCTCATTACTGGGGAGAGTGGAGCAGGAAAAACAG
INTRON 4 - 5 51,824,202 51,834,448 10,247
GTGAGACCACCACCAAACTGACCTT..........GTAACATGGCTGTTTCCCTCCACAG
5 EXON 5 51,824,097 51,824,201 1 1 105
AGGCCAGCAAGCTCGTCATGTCCTATGTCGCTGCCGTGTGCGGAAAAGGAGCAGAAGTCA
ATCAGGTCAAGGAACAGCTTCTGCAGTCCAACCCTGTCCTGGAAG
INTRON 5 - 6 51,820,188 51,824,096 3,909
GTAAGGATTTCATGTTTGGTCCTTG..........GATGCATCTGTTTCTTTCTCGTTAG
6 EXON 6 51,820,141 51,820,187 1 0 47
CTTTTGGAAATGCCAAGACTGTGAGGAATGACAACTCATCTAGATTC
INTRON 6 - 7 51,813,067 51,820,140 7,074
GTAAGTATTTGTATAAGCTTAAGTG..........AACTTACAGAGTCTTTCTTTGACAG
7 EXON 7 51,813,003 51,813,066 0 1 64
GGCAAATACATGGATATTGAATTTGACTTTAAAGGCGATCCGCTGGGAGGAGTGATAAGT
AACT
INTRON 7 - 8 51,801,283 51,813,002 11,720
GTGAGTATTTTTACTTGACTCTTTA..........TCTTCTATTTTTTTTTTCCTTTCAG
8 EXON 8 51,801,184 51,801,282 1 1 99
ATCTTTTAGAGAAATCTCGTGTTGTTAAGCAGCCAAGAGGTGAAAGAAACTTCCATGTGT
TCTATCAGCTGCTCTCAGGCGCCTCTGAGGAGCTCCTCT
INTRON 8 - 9 51,799,636 51,801,183 1,548
GTAAGTCTGCGGTTCTGGCCTTAGG..........TCAATTTGTATGCATGACTCAACAG
9 EXON 9 51,799,532 51,799,635 1 0 104
ACAAGCTTAAGCTGGAGCGGGATTTCAGCAGATACAACTATCTGAGTCTGGACTCTGCCA
AAGTTAATGGTGTGGATGATGCTGCCAATTTCAGAACTGTTAGG
INTRON 9 - 10 51,797,536 51,799,531 1,996
GTAAGAAGTGCCTTCATTATACTTT..........GAAAACAGGTGCTTCTCTCCTCCAG
10 EXON 10 51,797,388 51,797,535 0 1 148
AATGCGATGCAGATCGTGGGCTTTCTGGATCATGAGGCCGAGGCTGTCCTGGAGGTAGTG
GCAGCCGTTTTGAAACTGGGGAACATCGAGTTCAAGCCTGAATCACGAGTGAATGGTTTG
GATGAAAGCAAAATCAAAGATAAAAATG
INTRON 10 - 11 51,797,118 51,797,387 270
GTAAGTTAGTGGACAAGCAGTTTGG..........TCTGTCCTTCTCTACTCCCCAACAG
11 EXON 11 51,796,999 51,797,117 1 0 119
AGTTAAAAGAAATTTGCGAGTTGACCAGCATCGATCAGGTGGTTTTAGAAAGAGCATTCA
GTTTCCGAACAGTTGAAGCGAAGCAGGAGAAAGTTTCAACCACGCTGAATGTGGCTCAG
INTRON 11 - 12 51,794,399 51,796,998 2,600
GTGGGTAAATTGTAACATGCAGAGG..........AGTTGTTCTTTTTTCTTTTTAATAG
12 EXON 12 51,794,312 51,794,398 0 0 87
GCTTATTATGCCCGTGATGCCCTGGCTAAAAACCTCTACAGCCGCTTGTTTTCATGGTTG
GTAAATCGTATCAACGAAAGCATTAAG
INTRON 12 - 13 51,793,706 51,794,311 606
GTATTGAATCTCTGTAAGACACTAT..........ATTATCTTATTAATATTTTTTTAAG
13 EXON 13 51,793,640 51,793,705 0 0 66
GCACAAACAAAAGTGAGAAAGAAGGTCATGGGTGTTCTGGACATTTATGGCTTTGAAATA
TTTGAG
INTRON 13 - 14 51,784,542 51,793,639 9,098
GTAAGTTTTTTTTTTTAAATGAGTA..........GTATTGCCTTCTTCTTACCACACAG
14 EXON 14 51,784,437 51,784,541 0 0 105
GATAACAGCTTTGAGCAGTTTATTATTAACTATTGTAATGAAAAACTTCAACAAATCTTC
ATCGAACTTACCCTCAAAGAAGAGCAAGAGGAATATATTCGGGAG
INTRON 14 - 15 51,782,033 51,784,436 2,404
GTAAGGTTGAACCAGTCTAAGAGGT..........TGATTTTGTTCGGTTTTGTTTTTAG
15 EXON 15 51,781,970 51,782,032 0 0 63
GACATAGAATGGACTCACATTGACTACTTCAACAATGCTATCATTTGTGACCTAATAGAA
AAT
INTRON 15 - 16 51,779,762 51,781,969 2,208
GTGAGTACTTCGGTATTAAAGGGAT..........AACACCTTTATTTCTTTCCTCCCAG
16 EXON 16 51,779,561 51,779,761 0 0 201
AACACAAATGGAATCTTGGCCATGCTGGATGAAGAGTGCCTGAGACCCGGCACTGTTACA
GATGAGACCTTCCTGGAAAAGCTGAACCAAGTCTGTGCCACCCACCAGCACTTTGAGAGC
AGGATGAGCAAGTGTTCCCGCTTTCTCAACGACACGACCCTGCCCCACAGCTGCTTCAGA
ATCCAGCATTATGCTGGCAAG
INTRON 16 - 17 51,778,548 51,779,560 1,013
GTACCCCACGATGTTGTCCCCAGGG..........CGTGTGCTGTCACTATCACTCACAG
17 EXON 17 51,778,321 51,778,547 0 2 227
GTGCTCTACCAGGTGGAAGGATTTGTTGACAAGAACAATGACCTTCTGTACCGGGACCTG
TCTCAAGCCATGTGGAAGGCTGGCCACTCCCTCATCAAGTCTCTGTTTCCTGAAGGAAAT
CCTGCAAAGGTCAACCTGAAGAGACCTCCCACCGCAGGCTCCCAGTTCAAGGCATCTGTG
GCCACGCTGATGAGAAACCTGCAGACCAAGAACCCGAACTACATCAG
INTRON 17 - 18 51,776,405 51,778,320 1,916
GTGCTTCTGGGACTTGAGTTCATAT..........ACCTAAAATACTTGAAATGTTTTAG
18 EXON 18 51,776,204 51,776,404 2 2 201
GTGCATCAAGCCAAATGATAAAAAGGCAGCTCACATTTTCAATGAGAGTCTCGTATGCCA
TCAGATCAGGTACCTGGGTCTTTTGGAGAATGTTCGAGTGAGACGGGCAGGCTATGCCTT
CAGGCAGGCCTATGAACCTTGCCTGGAAAGATACAAGATGCTTTGCAAACAAACGTGGCC
TCACTGGAAGGGACCAGCAAG
INTRON 18 - 19 51,774,406 51,776,203 1,798
GTAAGGGACTCTCTGGCTCGTGCAG..........ATTTGGAATGTGTTTACTCTTCTAG
19 EXON 19 51,774,312 51,774,405 2 0 94
GTCTGGCGTGGAGGTTCTGTTTAATGAGCTAGAGATTCCTGTGGAAGAGCACTCCTTCGG
GAGATCCAAGATATTCATCCGAAACCCACGGACA
INTRON 19 - 20 51,773,383 51,774,311 929
GTACGTACCTTTACACTCTGACCTT..........CTGTCTATTGTTTTTTTTTAATTAG
20 EXON 20 51,773,233 51,773,382 0 0 150
TTATTCCAACTAGAAGACCTAAGGAAGCAGCGGCTGGAGGACCTGGCCACTCTCATTCAG
AAGATTTATCGAGGATGGAAATGTCGTACACATTTTCTGCTCATGAAAAGAAGCCAAGTT
GTGATTGCTGCCTGGTACAGGAGATATGCG
INTRON 20 - 21 51,770,855 51,773,232 2,378
GTGAGTCTGTTGTTACAACCCGAGG..........TTCACAGCTCCCCTTTATTCTGCAG
21 EXON 21 51,770,786 51,770,854 0 0 69
CAACAAAAGCGGTACCAGCAGATAAAGAGTTCAGCCCTGGTGATTCAATCGTACATCCGG
GGCTGGAAG
INTRON 21 - 22 51,769,091 51,770,785 1,695
GTGAGTTTCAGTAAGTGTGCTTTCT..........CATGGGCATGATTTCTCTACCATAG
22 EXON 22 51,769,004 51,769,090 0 0 87
GCTCGAAAAATCCTGCGGGAGCTGAAGCATCAGAAGCGCTGTAAGGAGGCAGCCACCACC
ATCGCGGCGTACTGGCATGGCACCCAG
INTRON 22 - 23 51,768,737 51,769,003 267
GTAGACCAGAGGCCCTGAGGAGGGT..........TAACTCCTTTTCAAACGCACCACAG
23 EXON 23 51,768,650 51,768,736 0 0 87
GCGCGAAGGGAGCTGAGACGGCTGAAGGACGAGGCTAGGAATAAGCACGCTATTGCAGTT
ATTTGGGCTTACTGGCTTGGATCGAAG
INTRON 23 - 24 51,766,909 51,768,649 1,741
GTACTGGATGCACACTTCCCATCAC..........TTATTTACTATCTAAAACGTTCTAG
24 EXON 24 51,766,822 51,766,908 0 0 87
GCACGGAGGGAGTTGAAACGCTTGAAGGAGGAGGCTAGGCGTAAGCATGCAGTTGCTGTC
ATTTGGGCTTACTGGCTTGGACTGAAG
INTRON 24 - 25 51,763,965 51,766,821 2,857
GTACTTTCTCCATGACTTCTCCTGC..........ACCCTCGGTCTGCTTCCTTTTAAAG
25 EXON 25 51,763,890 51,763,964 0 0 75
GTACGCAGGGAATACAGGAAATTCTTTAGAGCAAATGCTGGAAAGAAAATCTATGAGTTT
ACACTTCAAAGAATT
INTRON 25 - 26 51,762,627 51,763,889 1,263
GTAAGTTGATACTATGTATATAGCT..........GTATTTTCTATCAACCCCAATACAG
26 EXON 26 51,762,492 51,762,626 0 0 135
GTGCAAAAATACTTGTTGGAAATGAAAAATAAAATGCCTTCCTTGTCACCGATAGATAAA
AATTGGCCATCAAGACCTTACCTGTTCTTGGATTCGACTCACAAGGAGCTAAAAAGGATC
TTCCACTTGTGGAGG
INTRON 26 - 27 51,760,402 51,762,491 2,090
GTAAACTATGCAATGGTTCGCTTTT..........TGTATGTTTTTCTTATATCTCACAG
27 EXON 27 51,760,295 51,760,401 0 2 107
TGTAAAAAATACAGGGATCAATTCACAGACCAGCAGAGACTTATTTATGAAGAGAAGCTC
GAGGCCAGCGAACTCTTCAAAGACAAGAAGGCTTTATATCCTTCTAG
INTRON 27 - 28 51,758,009 51,760,294 2,286
GTACGTATAGTTTTGCTTACTCAAA..........GTACAAGAATTTTTATTTCCTTTAG
28 EXON 28 51,757,876 51,758,008 2 0 133
TGTTGGGCAACCATTCCAAGGAGCTTACCTGGAAATCAACAAGAACCCAAAATATAAGAA
ACTCAAAGATGCCATTGAAGAGAAGATCATTATTGCTGAGGTTGTGAACAAAATTAATCG
GGCTAATGGGAAG
INTRON 28 - 29 51,757,258 51,757,875 618
GTAAAAATGCTAACACGCCTGTGAC..........TTTCTCTCTCTCTCTCTTGTTTCAG
29 EXON 29 51,757,105 51,757,257 0 0 153
AGTACATCTCGGATTTTCCTCTTAACAAACAATAACCTTCTCCTTGCTGACCAAAAGTCT
GGGCAGATCAAGTCCGAGGTCCCCCTGGTAGATGTGACCAAGGTTTCCATGAGTTCCCAG
AACGATGGTTTCTTTGCAGTGCACCTCAAGGAG
INTRON 29 - 30 51,755,771 51,757,104 1,334
GTAAGTGTCACCTGGTGACTTGACA..........ACCCTTGTCTTGCCTTTCTTTGCAG
30 EXON 30 51,755,643 51,755,770 0 2 128
GGTTCAGAAGCGGCTAGTAAAGGGGACTTTCTCTTCAGCAGTGACCACCTGATTGAAATG
GCAACCAAGCTGTATCGCACGACTCTCAGCCAAACTAAACAGAAGCTCAACATCGAGATT
TCTGATGA
INTRON 30 - 31 51,751,297 51,755,642 4,346
GTATGTCCTTGTATTGTGTAGTACA..........CTGAGTGTGTTTGGTTCTCTTCTAG
31 EXON 31 51,749,994 51,751,296 2 - 1,303
GTTCCTGGTACAGTTCAGACAAGACAAAGTATGTGTGAAGTTTATTCAAGGCAACCAGAA
AAATGGGAGCGTGCCAACCTGCAAACGAAAGAACAACAGACTCCTTGAAGTCGCTGTCCC
TTAAGTGAGGCTTCCTCTCTGCTCTCACGGACTTGTTTCCTCGTAACAGTGCAATTTTAC
TTTGTTTTATTTGGGGTTCACTGTATGTTTGGGAATTGCCAAAGGCTAACTGTTAGCGTC
CTCTTGGCACAATTAAAAGTATTTGACTAATGAGTTTTAATTATCAGAATAGTTCATTCC
TAAGTCCACATTCTGTCCTGGGCAGAATTATAGAAATTAACAGTGTCTGTTTCCATGGTT
TATGTGTTTTCTCCTTAGTTACCTAGACTTGTGTACCCTAAACCCACATATTACCCATAA
ATCACTAGTACATGTCAGCACAGGAGGGGAGCTTACAGTCAGTTATCAGATATTTATTGA
ATGCCTACTTTTTGCTGGGCCCTGTGCTGAACTTATTCGGAGATTTCTATTTTTAAAGCT
GTTGCCTTCTGGCTGATTTGTGCTGTCGAAGCAACAGCTAAGAAAGTTGAAGAGATTGGG
TCAAATGAGACTATAAATGACGGCCACTGGTAGGAACCCAGTAGTGTGGCGTAAACAGTA
CACTCACTGAGAAGTAGAGGTCCTGGGTGGATTGGAGATAGGTAATTGGGTAGAATTCTC
CTGAGAGGTTTGGAGATAGATGATTGGGTGGAATTCCTCTGTGTTTGTTTGTTTGTTTGT
TTTTCATAAATCTATTTGAAAAAGAGATAACCAACATTTAAACATACACATTTATTGGTT
CAGATCCATTTTCACTTTAGAAAAAGTCACTGAAGCAGGGCTGTAGAATGCTTTGTTCCT
GTTCCAGAGAAGCATGACATAGGACCCTGGATGTGCACAGTGTATCCACCCAGGGTCATT
AGCTTTTGAAACTGCATGATAAGAAGAGGCTGAGAGCCGTTCAGACTGGCAAATCTTCTC
TTTGATGTGCAATAAAACATCCAAGATCACTTTTGAAAGGTTTATTTATAATATGCATTT
TTTTTGTATGAGAGAGCTGATTGGTACAAGGTGTGTATTTTAGTCAGATCAAAATTAAGT
TAGAATTGGTTTTCAGGGCTTTTTGGTTTTTTTTCTTCAAAATTAACAATAAGGATTCAT
TTTGGAAACCACATTTTAAACTCTGGAATTAAATTGTTTCTTATTTGGGAGGATAATGTA
AATACATTGGGATTATGTTAATAATAAAATTGTTCTAATTTGG
3' upstream sequence
TGCCATTTGCTGGATCACAACTGTATTTTTGTATCTCAAGCTATTTTCATATGTTAGTGT
CAAAGTGATGTGTCACAGAAAGGATTTCCATTCAGATATTATATGGTCTCTGTGTTAACA
GATTTCCACTGATCTTTTTGTACCACTATCAGTCAATGAAAAAGTTCTCTGGGGATTTTC
TTTTGATTTTTGTACTTAAAAAGAAAAAAAAAAAGTTCTGATAAAGAAATTCTCCGAAGT
CTTCGTGTTTATTGGTACAGGAAATGGATATGATCATTTTTTACAGTTCCTAAAGTAGGT
AAATTCATAATTCCTGCTATAGGTAGATGGAAACTTCGGACTGATCACTGGTATTTTGAA
AGCATATACTTATAGTTAGCTAAATATACTTACAACAGTCAAAAAACCCTGGTCAGTACA
AAAGGCTACCAACTGTCCATCTGTCAAACCACCGTCTGTCTGCTGAGTTTCTGCCTCCAA
AGGTTAGCCTTCCGGTTGCTTCTGCATTGTATGGTGTGTTTGCTTCAGGGAGAGTGTAAT
TCTGTCTTCCTCTCAGTTGACAAATGCCAAGCTCGTGTGCCCACAGACATGTTATTCTTG
CCTTCTAGCAGGGACACCACAGAGGACAAGCACTTCACAGTGGCTCAGTCCTTTCTTGTG
AGGTGCCCCATACTGCCTTCTCCAGCTTCCACTCATCATCACCGAGTTGTTTCTTGAGTA
GAACCCCAATTGCAGTGGGCCCAAAGTATGAGATGGCTTGGTAAATTTTCCCACTACACT
TCCAGATTGTCCCCTGGGGTGCTTTGCAACAGTAGCATTCAGCAAAGGTAAACAGTTTCT
ATTTAGTCCTAAACAACACTGTGAACAGGCTTAGAAGACCTTATTTACAGGGGAACTAGG
GGGATATTTTTCATATGCCTTCTGTTACATTGCTCTATCAAGTTCTTTTGGTCACAGAAT
TCACTCTATATGAACTGTGCCTTTACGTGTTAGAAAACCC..........

Sequence Detail Report

Gene Symbol (Gene ID) Myo1b (ENSMUSG00000018417)
Transcript ID ENSMUST00000018561
SNP Information
Strain :
Sequence Retrieve :
Exon translate :
CDS Start ( 1 ) - End ( 1137 )
-
Strand : forward reverse
Show sequence : nucleotide amino acid
Color information