|
|
5' upstream sequence
|
|
|
|
|
|
..........GCCCCTTAAATTTTCTTGGTTTCCATATAGTCCATTGAATGACTAGGCTG
GACCACATGATCACACAGACCTTTTGTCTAATGCCTGCATCTTTAACACGGTGTATCCGG
TCTTTGAGGATACATTGTTTAGTCACCTAACTATAATATTAACTGAAGCAAATATATGTT
TACTAGGGATATATGAGTCACCCTTAATGTGTGTTGATTGCATAGGTCATAATTGCAACC
ATTTACTGCGTTTCTTGTATACCAGGAAATCTACTGGGTGCTCTCTACACAGACGACCGC
ACTAGCTCCCCACAACTTTATAAGGTAGATTTAAATAGTAGAGTCATCCAAGGTCAAGTC
TGTAAGTAGTGAAGCAACTCAGAATGCCAGCACGGTGTGTGTTGACAACAAAGCCCTTAT
ATGTTTAATGAAACAGTAATGAAGTTGTATTTTTTGCTTTCGTTGAGACAGAATCTCACT
ATGAAGCTGAGGGTAATGTGTAACTAGCCATTCCCCTGTGTCTGCCTCCCAAGTGCCAAA
TGCCTTTCCTACTTTGTTTTTGGCCTGGGGATCGCGGCCACGGTTAATTTCAACGCGGTC
TCCCCCCCCCCCCCCCCGGATTGTGATGCATTATGGTTCTTTGATTTTACTGTTTACTTC
CATTCGGCTTATAATTGATGAATGGGAGATTACAGTATTCGTGTCGAGTGCCCTTCTGAA
TCTAAACAAGCAGCCAACCGCCGCCAAATGACCCGGGCTTTGTGCCTCTGCGGTGCTCCG
TGGGTGTCCTTCCGCTATCGCCTGCCTTTCCGAGAATCCGCGTTCTGGCCAGAAAAACTA
CATTTCCCAGAGGCTCCCACGACAGGGAGCGCGGGCTCGGCCAACCCTTCCTTCCTTCAC
CCATCCCCCCCCGCATTGTCGCAGCGTGATGACGCAAAGCGTCGGTCGCGGAGGAGTGAC
GGTGTTCTGGCTCGCGACCGGGGCGGCCGCCTCAACAGCGGTAATAGGCG
|
|
1
|
EXON 1
|
46,727,360
|
46,727,940
|
- |
0 |
581
|
CAAGAGCGGCGGCGGCGGCGACGACTGCAGGGACGACGACGGCGGCGGCGGCGGTGGGGC GGGCGCAGCGCGCACAGGGGGAGGGGTTGGCGGGCGGCGCCAGCGGCCTGGACTGCGGCA GCGACGGCCAGGGCGGCTGAAGAGGAGCCTCTAGCAGCGGGCGGTCGAGCTAGGCCTCAG CGGCGCCCGGAGCTGCTCGCGCCGGCCTCGGCGGGAGATCTCCATAGAGACGGTGACAAA CACAGACGCGGGGGTCCGCACGCGGCCGGCGCTCCTCAGCCACCTCGGGGCCCTCAGCCG CCGCCACCGCCTTCCTCGCCGCCGCGCGCACTCTCAGTTCCCGCTCGCTCCCTCGCGGTT CTCGCTGTGTCTGTGTGTCGCCTAGGGCCGGGCGGGGGAGGCCCTCAGGCCGCCGCCTCT GCCTCTCCCGCCCGGGAGCGGTAGTGGGAGGCCGCCCAGGCTCCGCCATGGCCTCGGGAG CCGGAGGCATAGGAGGGGGCGGCGGCGGCGGCAAGATCCGGACTCGTCGTTGCCACCAGG GGCCGGTGAAGCCTTACCAACAGGGGCGACCCCAACACCAG
|
|
|
INTRON 1 - 2
|
46,717,324
|
46,727,359
|
|
|
10,036
|
GTACGGGACCGGTACGCCGTGGCGA..........TCTTAATGTATGTTTTCTCCAACAG |
|
2
|
EXON 2
|
46,717,101
|
46,717,323
|
0 |
1 |
223
|
GGCATTCTTAGCAGGGTTACAGAATCTGTTAAGAATATTGTACCAGGGTGGCTACAAAGA TACTTCAACAAGAGTGAAAATGCTTGCAGCTGTTCACCAGATGCAGATGAAGTTCCACCC TGGCCAGAAAATAGAGAAGATGAGCATGCGATTTATGCGGATGAGAACACAAACACTGAT GATGGGAGAATCACCCCTGACCCTGCAGGCAGTAACACAGAAG
|
|
|
INTRON 2 - 3
|
46,713,870
|
46,717,100
|
|
|
3,231
|
GTAAATACTGTGGATATTTGGTTAC..........AATGTTAACTATTCATTCTTTTAAG |
|
3
|
EXON 3
|
46,713,621
|
46,713,869
|
1 |
1 |
249
|
AACCATCAACAACCAGTACTGCTTCAAATTATCCAGATGTGTTAACAAGACCTTCTCTTC ATCGGAGTCATCTGAATTTCTCTGTGTTGGAATCCCCTGCTTTGCACTGTCAGCCGTCCA CATCCTCTGCGTTCCCAATCGGCAGTTCTGGATTTTCCCTTGTGAAGGAGATTAAAGATT CTACCTCTCAGCATGATGATGATAACATCTCAACTACCAGTGGGTTCTCTTCAAGAGCTT CTGAGAAAG
|
|
|
INTRON 3 - 4
|
46,712,981
|
46,713,620
|
|
|
640
|
GTACTCAAAGGTCTTTGTAACCATG..........TACAAATTATAAATTTTTATTTTAG |
|
4
|
EXON 4
|
46,712,841
|
46,712,980
|
1 |
0 |
140
|
ATATAGCTGTTTCAAAGAACACTTCCCTGCCACCTTTGTGGTCCCCTGAAGCAGAACGTT CTCATTCACTCTCACAGCATACTGCCATCAGCTCCAAAAAACCAGCATTCAACTTGTCTG CCTTTGGAACACTTTCCACC
|
|
|
INTRON 4 - 5
|
46,712,762
|
46,712,840
|
|
|
79
|
GTGAGTACTAACTATAATGGGTATA..........AATTTATCACTGTTTTTCTATGCAG |
|
5
|
EXON 5
|
46,712,633
|
46,712,761
|
0 |
0 |
129
|
TCACTTGGGAATTCTTCAATTCTTAAAACAAGTCAGCTTGGAGACTCTCCTTTTTATCCT GGCAAAACAACATATGGAGGGGCAGCTGCTGCTGTAAGACAGAATAAAGTACGAAGTACA CCTTACCAG
|
|
|
INTRON 5 - 6
|
46,710,029
|
46,712,632
|
|
|
2,604
|
GTTAGTTTGAGTAGAATTGTTGATA..........AGTAACACAGACTTTTATTTTCTAG |
|
6
|
EXON 6
|
46,709,912
|
46,710,028
|
0 |
0 |
117
|
GCTCCAGTTAGAAGACAGATGAAAGCTAAGCAGCTCAATGCACAGTCTTATGGTGTGACC AGCTCAACAGCACGGCGGATACTGCAGTCATTAGAAAAGATGTCGAGCCCTCTTGCG
|
|
|
INTRON 6 - 7
|
46,709,811
|
46,709,911
|
|
|
101
|
GTAAAGTTTGAAATCATGAGATGTA..........TTTTTTGTTATTGTAATGTTAACAG |
|
7
|
EXON 7
|
46,709,766
|
46,709,810
|
0 |
0 |
45
|
GATGCAAAAAGAATTCCATCTGCAGTTTCTTCTCCTCTGAATTCT
|
|
|
INTRON 7 - 8
|
46,709,683
|
46,709,765
|
|
|
83
|
GTACGTTCACTTTTAAATCTTACAT..........AACACTATTTCTCTCCTTTTTTCAG |
|
8
|
EXON 8
|
46,709,629
|
46,709,682
|
0 |
0 |
54
|
CCTCTTGATAGGAGTGGGATAGATAACACAGTTTTTCAGGCAAAAAAAGAAAAG
|
|
|
INTRON 8 - 9
|
46,707,894
|
46,709,628
|
|
|
1,735
|
GTAAGCTGTGTAAAATGTCAGCAGC..........GTTTTGATTTCTGTTTTCTTTTAAG |
|
9
|
EXON 9
|
46,707,747
|
46,707,893
|
0 |
0 |
147
|
GTGGACTCTCAGTATCCCCCTGTTCAGAGACTAATGACCCCAAAGCCAGTTTCCATAGCA ACAAATAGAACTGTCTATTTTAAACCATCTCTGACCCCATCTGGTGACTTAAGGAAGACT AATCAAAGGATAGATAAAAAGAACAGT
|
|
|
INTRON 9 - 10
|
46,705,216
|
46,707,746
|
|
|
2,531
|
GTGAGTTTGTTTGTTTATTCTGTTT..........TTCTTATACTGTTTTTTTCTTTCAG |
|
10
|
EXON 10
|
46,705,169
|
46,705,215
|
0 |
2 |
47
|
ACTGTAGATGAAAAAAGTATCTCAAGACAAAATAGAGAGCAAGAAAG
|
|
|
INTRON 10 - 11
|
46,704,767
|
46,705,168
|
|
|
402
|
GTAATGATATCTCATATGCTGCAAC..........TTCTAATTTTCTTTTTATTTGCTAG |
|
11
|
EXON 11
|
46,704,640
|
46,704,766
|
2 |
0 |
127
|
TGGCTTTTCATACCCCAATTTCAGTATTCCTGCAGCCAATGGTTTATCTTCTGGAGTAGG TGGTGGAGGTGGCAAGATGAGAAGAGAGAGAACACATTTTGTTGCTCCTAAACCTCCAGA GAATGAG
|
|
|
INTRON 11 - 12
|
46,701,739
|
46,704,639
|
|
|
2,901
|
GTAGGCTATATTTTATAGAACTGAA..........CCTTACAAAACATGCTGTGTTTTAG |
|
12
|
EXON 12
|
46,701,604
|
46,701,738
|
0 |
0 |
135
|
GAAGTGGAAGCACCATTGTTACCGCAAATCTCTCTACCAATCAGCAGTTCTTCACTGCCC ACCTTCAGTTTTAGTTCCCCTGTGACCTCGGCTTCTCCTTCACCAGTCAGCTCTTCTCAG CCATTACCAAACAAG
|
|
|
INTRON 12 - 13
|
46,701,088
|
46,701,603
|
|
|
516
|
GTATAGAACCACTGTATAAGTGAGG..........AAAAAAAAAAAAAAACCCAAACCAG |
|
13
|
EXON 13
|
46,700,989
|
46,701,087
|
0 |
0 |
99
|
GTACAGATGACCTCTCTGGGCAGCACGGGCAGTCCTGTGTTCACATTCTCATCTCCCATT GTAAAATCCACGCAGGCAGCTGTGCTCCCTCCAGCATCT
|
|
|
INTRON 13 - 14
|
46,699,734
|
46,700,988
|
|
|
1,255
|
GTAAGTACCAAACAAGAGCAGACAG..........TGAAAATTACCTTTTCTTGTTATAG |
|
14
|
EXON 14
|
46,699,649
|
46,699,733
|
0 |
1 |
85
|
ATTGGATTTACATTTAGTGTGCCTCTTGCAAAAACTGAATTTTCTGGCTCTAATAGTTCT TCAGAAACAGTTTTAAGTAGTTCAG
|
|
|
INTRON 14 - 15
|
46,696,769
|
46,699,648
|
|
|
2,880
|
GTAAGTGAAAAAATATTTCACATTC..........CTCTTTTATAATTTAAAAATTACAG |
|
15
|
EXON 15
|
46,696,646
|
46,696,768
|
1 |
1 |
123
|
CCCAAGATATCACTGCAGTGAATAGTTCAAGCTATAAGAAGCGAAGTGCTCCTTGTGAGG ACCCCTTTACACCTGCAAAGATCCTGAGAGAAGGAAGTGTTCTAGACATTCTGAAAACAC CTG
|
|
|
INTRON 15 - 16
|
46,694,118
|
46,696,645
|
|
|
2,528
|
GTAAGTGAACAGCTGCCCTTGTGAT..........ACATTCTTTTCTTTCTTCACTGTAG |
|
16
|
EXON 16
|
46,693,512
|
46,694,117
|
1 |
1 |
606
|
GTTTCGCATCACCAAAGGTTGATTCTCCTGCTCTTCAACCCACTACCACAAGCTCAATAG TTTATACAAGACCAGCAATAAGTACTTTTTCTTCTAGTGGAATTGAGTATGGAGAAAGTT TAAAAGCTGGATCATCATGGCAGTGTGACACATGTCTCCTCCAGAACAAAGTCACAGACA ATAAGTGTATAGCCTGCCAAGCAGCAAAACTGCCCCTGAAAGAAACTGCTAAACAGACTG GGACTGGGACACCAAGCAAAAGTGACAAACCAGCCTCTACATCAGGGACAGGCTTTGGAG ATAAATTTAAACCAGCAATAGGAACTTGGGATTGTGATACCTGTTTAGTACAAAATAAGC CCGAAGCAGTAAAATGTGTAGCCTGTGAGACACCTAAGCCTGGCACTGGTGTGAAGCGAG CCCTTACATTGACAGTGGCTTCAGAAAGTCCTGTGACTGCTTCCTCTTCTACCACTGTGA CAACTGGTACACTAGGATTTGGAGATAAATTCAAAAGGCCTGTGGGCTCTTGGGAGTGTC CAGTCTGCTGTGTTTGTAATAAGGCAGAAGACAACAGATGTGTTTCCTGTACATCTGAGA AACCAG
|
|
|
INTRON 16 - 17
|
46,689,251
|
46,693,511
|
|
|
4,261
|
GTACGTTTTATGTCTATATGAAATA..........TGCCTCCATTTCCCAATTCTTTTAG |
|
17
|
EXON 17
|
46,689,059
|
46,689,250
|
1 |
1 |
192
|
GTTTGGTATCTGCCTCAAGCAGCAGCCCTGCCCCTGTCTCTCTGTCTTCTGGAGGCTGTT TAGGATTGGACAAGTTTAAAAAGCCCGAGGGAAGCTGGGACTGTGAAGTGTGCCTAGTGC AAAATAAAGCAGACTCTGCCAAGTGCATAGCTTGTGAAAGTGCAAAGCCAGGCACAAAGT CTGAGTTTAAAG
|
|
|
INTRON 17 - 18
|
46,687,499
|
46,689,058
|
|
|
1,560
|
GTGAGGCTATGGTAAAGAACCCCTT..........TTTTGTGTGTTGTCTGTTTTTGAAG |
|
18
|
EXON 18
|
46,686,623
|
46,687,498
|
1 |
1 |
876
|
GCTTCGGGACATCTTCATCTTTAAATCCAGCACCCTCAGCCTTCAAATTTGGTATTCCAT CGTCCTCTTCTGGGCTTTCTCAAACTTTGACAAGCACTGGAAATTTTAAATTTGGAGATC AGGGAGGATTCAAATTAGGCACTTCATCTGACTCTGGGTCTACAAACACCATGAATACAA ACTTTAAATTTTCTAAACCAACTGGAGACTTTAAATTTGGAGTGTTATCTGATTCCAAAC CTGAAGAAGTTAAAAACGACAACAAGAATGATAATTTTCAGTTTGGATCTTCTTCTGGCT TAACCAACCCAGCTTCTTCAGCTCCGTTTCAGTTTGGGGTATCTACTCTTGGGCAACAAG AAAAGAAAGAGGAGCTGCCTAAATCTTCACCTGCAGGCTTTAGCTTTGGTGCAGGTGTTA ATAACCCCCCTAATGCTGCTATTGACACCACAGTGACCTCAGAGAACAAGAGCGGCTTCA ACTTTGGAACCCTAGACACAAAGAGTGTCTCAGTGACTCCTTTCACATACAAGACAACAG AAGCAAAGAAAGAAGACGCACCTGCTACCAAGGGTGGGTTCACATTTGGTAAAGTGGACT CCTCTTCTTTGCCATCTTCCTCAATGTTTGTTTTGGGAAGGACAGAGGAGAAACAGCAAG AACCTGTTACTTCTACTTCTCTGGTGTTTGGGAAGAAAGCCGACAGTGAGGAGCCAAAGT GTCAGCCAGTATTTTCCTTTGGGAATTCAGAACAAACCAAAGATGAGAGCTCCAAGCCGA CATTCAGCTTCAGTGTGGCAAAACCATCTGGGAAGGAGTCTGAGCAGCTAGCCAAGGCTA CTTTTGCATTTGGAAATCAAACCAATACAACAACTG
|
|
|
INTRON 18 - 19
|
46,684,237
|
46,686,622
|
|
|
2,386
|
GTAAATAGTAAAAGACTTTTTTTCT..........TTGTTTCTCAATCATTGTTTTGCAG |
|
19
|
EXON 19
|
46,683,883
|
46,684,236
|
1 |
1 |
354
|
ATCAAGGTGCAGCAAAGCCAGTTTTTAGCTTCTTGAACAGCAGTTCCTCTAGTTCAAGTG CACCAGCCACTTCATCTAGTGGTGGCATATTTGGTAGTTCCACCTCTTCCTCCAACCCAC CTGTGGCAGCCTTTGTGTTTGGACAGGCCAGCAATCCTGTCAGCAGCTCTGCCTTCGGTA ACGCTGCTGAATCCAGTACATCTCAGTCTTTGCTATTTCCTCAAGAGAGCAAGCCAGCCA CCACGTCCAGCACTGCCTCAGCTGCCTCTCCCTTTGTATTTGGAACAGGAGCCAGCAGTA ATAGTGTGTCTTCTGGGTTCACTTTTGGGGCTACAACCACGTCAAGCTCTTCAG
|
|
|
INTRON 19 - 20
|
46,683,270
|
46,683,882
|
|
|
613
|
GTACTTTTGTGCTATGAGAGAAAAA..........GATTTAACTATTTCTTGGCCTCCAG |
|
20
|
EXON 20
|
46,682,997
|
46,683,269
|
1 |
1 |
273
|
GATCCTCCTTTGTATTTGGCACTGGACATTCAGCACCATCTGCCAGTCCAGCATTTGGTG CTAACCAGACTCCAACATTTGGACAAAGTCAAGGTGCCAGCCAGCCTAACCCGCCAAGCT TTGGCTCTATCTCGTCTTCAACAGCATTATTTTCTGCTGGTTCTCAGCCTGTACCACCAC CTATATTTGGGACAGTGTCAAGCAGCAGCCAACCTCCTGTGTTTGGACAGCAGCCTAGTC AGTCTGCATTTGGCTCTGGGACAGCTAATGCCA
|
|
|
INTRON 20 - 21
|
46,681,693
|
46,682,996
|
|
|
1,304
|
GTAAGTTTGTATGATAGTTGATATC..........GATATTTTCTGCTTAATTTGTATAG |
|
21
|
EXON 21
|
46,681,524
|
46,681,692
|
1 |
2 |
169
|
GTTCGGTTTTCCAATTTGGTAGCAGCACTACGAATTTCAACTTCACAAACAATAATCCAT CAGGAGTGTTCACATTTGGTGCAAGTCCCAGCACGCCTGCAGCCTCAGCCCAGCCCTCAG GTTCAGGGGTCTTTTCATTCAGCCAGTCTCCAGCATCATTTACAGTGGG
|
|
|
INTRON 21 - 22
|
46,681,243
|
46,681,523
|
|
|
281
|
GTAAGATTATTTCATTGAGAATTTA..........TTGTAATGTTTTTATTTTTTCACAG |
|
22
|
EXON 22
|
46,679,905
|
46,681,242
|
2 |
- |
1,338
|
GTCAAATGGGAAAAATATGTTCTCTTCTTCCGGAACTTCAGTTTCTGGTCGCAAGATAAA GACTGCTGTTAGACGCAAGAAATAAAGGTCACAAAGGTGTTATACCCAACAGTTTTATCA ACAGCTGGTGCCCTGCTTTCAGATACTGGATTGTACTACATGCTGGGCTTATCTGAAGTC AGATCTGCCTAAGGACTTCTTTAATTTTGGAATTGTCCTCTTTTTTTTCTTTATGGAAGT CCTGTCCCCATAACCCATTCTCTTTTTGAAAATAATAGCTAGACTGGTGACTGACTGATT CTTCAGCAGAAACATTTTATGATCCAGCACATTATTCACTGATTGGCATAGTCTGGCTGT ACCCAGGAATAGAGCCTGCACGGTGAATGGCTTTGTATAGAACCTGTCTGCACCGCTATG TGCATTGATAAAGCGTTAATGGAGCGTGTTGAAATTGTAATTATATCTGGGGAATTCTGT ATAGATTAGAATCCTGTATAGATTAGAGGACGTTGAAATGAATGATTTCTATGCGGAGTT TGTGGTGGTGTATGTGTGAAGTGAGTAAGTGGGACGTATTGTGCACAGAAAAATTCTGAT AGAGAAAACCTGATTAAAGAATGGTCCATCCTAAGGACTTGTTAGATCTAGTTCATTCTC CACTTAATAAGTATATGCTATTTCTATATTTTCATTCTATCAACTGTCTTGCCTTTTTCA TTATTTTATTATGAGACTTCTGTAAATACAATTTTGTTTCTGTACCTTTTTGGCATAACA TAAATCTGTGAACTTGAAATTTTAATTTTATGTTAGACATATTTTTGTTGTTTGTTTAGT CTTGTCTCAGATTTTATTATGTAAATCCCATTATTCAAAGTTGCCTAAATCCATTTGGAA ATCTTTAAAAAAAATTGGGGATTCTTAAAGTTGAATTTATTGGCTTTTCTGATCCAGTTT TGTTTGGACCAAAAACCAGTATTGTACAAAGTATTAAGCATATATTTTTATATTTACTGA AATGGACTGTGGTGACTTTGGATAATAAGGAAAAAGTTTAATATTAAAGCCATGTTTATT ACAGTATAATTAACATGTTAAACCATGGGATAAATGCCATCAATAAAACTTTATGAAGCA AATTTGTTAACAGTTTTCATAGTGAAGGCACACAATATTAATGGGAAGGGTGGTTGATTA GAAACCCCAAAGGGTATGTATCAGGTAAGGCCCAAGAGTTACTGGCGTTTGCAGAACACA GAAGATCCCCTCCTTTCTGCCTGCTGCTGTCTTTACTTAATTTGCACGTATATTTTCTCA TTAAATTTTGAAAATAAA
|
|
|
3' upstream sequence
|
|
|
|
|
|
CGTACAACCCTTTCTGTTTGTACTTCTAGCTTCCTTGCTAGGTGCCTAGACAATGTTTAT
TGCTCACATTCTTGGAGATAATATGCCTCAGGCACTCCAACAGTTTATAGAACTAATGGG
CCTTTTACTATGTTATTTGTATGATTAGACTTTTAGCTCTCTTCAGGTCCAGGAAAGAAC
TTGGAGCAGTACTTTATACTTTTGTCCTTCATTAGGATTGGCATTTGTTAGTGGTGTTTT
TCTGTTTTGTTTTGTTTGCAACTACAGGCTGGTTGAATTTACATGGAGAATTTCTAAAGC
TTTGTTCTTATGAAAAGATATTTTTCTTACTATCTTAGGCTATCATTACATTGATCTGAG
GGCAGAGCTTTTTATGTTTCTAATATTTTATTTAATAATATATACCTGACCTGTTTGGAG
TCTGGTGAATGCTGGTATCAAATGCTGGAAACCTGACTTTACCCACTTTGTCGGCCAGTC
CTTCACCATTTTCTATGTCCAAATAATTGGGGCTTAATAGAGCATATGCCTTTTCTGTAA
ACTGTAGAAAATAATTTTGCTTCATTTTAGTATTCCTTTGTTTAGAGTAGGTTACTACAG
TTATAACTAGTGCTGGTTCATATTAAAATTGGTGACCTTTTGGTTCTCTAGAGTCTGTAA
GACTATTCAGATTTTGAGACTTGATTCTTGGGCACACTTCTAGCTTCCTTGCTAGGTGTG
TGTGGCTTTCCGGTCATGGTGGCAGCCCCATCTCTTGGTCTGTCCTTCCTCAAGCCCAGC
AGAGGTAACTAACTCTACATTGGATTGAGTGGGCTTGAGTGCTTACTAGTGGAATGTATA
AATGTTCTAGGACATATACCCAGAGACTGACAGACTGGTTTTGGTTAGCATTCAAGACTG
CATCATTAAAGGTACCTCAAGTCACTTAATGCTGTCAGGTCTGGTTATATCATTTTAAGC
ATTAAGTGCTAGGTTGGTTGTAGTGATTACAGTATCAGGC..........
|