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Target CDS Information

Gene Symbol (Gene ID) Nup153 (ENSMUSG00000021374)
Cross Reference
CCDS CCDS26486.1
EMBL AC124598
GO GO:0005487, GO:0005487, GO:0005515, ...show all
goslim_goa GO:0003674, GO:0005198, GO:0005575, ...show all
MGI_trans_name Nup153-001
OTTP OTTMUSP00000063508
OTTT OTTMUST00000113630
Reactome R-MMU-1430728, R-MMU-1640170, R-MMU-170822, ...show all
RefSeq_mRNA NM_175749.2
RefSeq_peptide NP_786925
UCSC uc007qhj.2
UniParc UPI00001C5195
Uniprot/SPTREMBL E9Q3G8
Vega_transcript Nup153-001, OTTMUST00000113630
Vega_translation 214411, OTTMUSP00000063508
Definition protein_id:ENSMUSP00000021803
translation:
MASEAGGIGGGGGGGKIRTRRCHQGPVKPYQQGRPQHQGILSRVTESVKNIVPGWLQRYF
NKSENACSCSPDADEVPPWPENREDEHAIYADENTNTDDGRITPDPAGSNTEEPSTTSTA
SNYPDVLTRPSLHRSHLNFSVLESPALHCQPSTSSAFPIGSSGFSLVKEIKDSTSQHDDD
NISTTSGFSSRASEKDIAVSKNTSLPPLWSPEAERSHSLSQHTAISSKKPAFNLSAFGTL
STSLGNSSILKTSQLGDSPFYPGKTTYGGAAAAVRQNKVRSTPYQAPVRRQMKAKQLNAQ
SYGVTSSTARRILQSLEKMSSPLADAKRIPSAVSSPLNSPLDRSGIDNTVFQAKKEKVDS
QYPPVQRLMTPKPVSIATNRTVYFKPSLTPSGDLRKTNQRIDKKNSTVDEKSISRQNREQ
ESGFSYPNFSIPAANGLSSGVGGGGGKMRRERTHFVAPKPPENEEVEAPLLPQISLPISS
SSLPTFSFSSPVTSASPSPVSSSQPLPNKVQMTSLGSTGSPVFTFSSPIVKSTQAAVLPP
ASIGFTFSVPLAKTEFSGSNSSSETVLSSSAQDITAVNSSSYKKRSAPCEDPFTPAKILR
EGSVLDILKTPGFASPKVDSPALQPTTTSSIVYTRPAISTFSSSGIEYGESLKAGSSWQC
DTCLLQNKVTDNKCIACQAAKLPLKETAKQTGTGTPSKSDKPASTSGTGFGDKFKPAIGT
WDCDTCLVQNKPEAVKCVACETPKPGTGVKRALTLTVASESPVTASSSTTVTTGTLGFGD
KFKRPVGSWECPVCCVCNKAEDNRCVSCTSEKPGLVSASSSSPAPVSLSSGGCLGLDKFK
KPEGSWDCEVCLVQNKADSAKCIACESAKPGTKSEFKGFGTSSSLNPAPSAFKFGIPSSS
SGLSQTLTSTGNFKFGDQGGFKLGTSSDSGSTNTMNTNFKFSKPTGDFKFGVLSDSKPEE
VKNDNKNDNFQFGSSSGLTNPASSAPFQFGVSTLGQQEKKEELPKSSPAGFSFGAGVNNP
PNAAIDTTATSENKSGFNFGTLDTKSVSVTPFTYKTTEAKKEDAPATKGGFTFGKVGSSS
LPSSSMFVLGRTEEKQQEPVTSTSLVFGKKADSEEPKCQPVFSFGNSEQTKDESSKPTFS
FSVAKPSGKESEQLAKATFAFGNQTNTTTDQGAAKPVFSFLNSSSSSSSAPATSSSGGIF
GSSTSSSNPPVAAFVFGQASNPVSSSAFGNAAESSTSQSLLFPQESEPATTSSTAPAASP
FVFGTGASSNSVSSGFTFGATTTSSSSGSSFVFGTGHSAPSASPAFGANQTPTFGQSQGA
SQPNPPSFGSISSSTALFSAGSQPVPPPIFGTVSSSSQPPVFGQQPSQSAFGSGTANASS
VFQFGSSTTNFNFTNNNPSGVFTFGASPSTPAASAQPSGSGVFSFSQSPASFTVGSNGKN
MFSSSGTSVSGRKIKTAVRRKK

Chromosome 13
Length
Position(start - end)
46,314
46,681,158 - 46,727,473
Orient to Chromosome minus
Link Location : (13:46681158-46727473)
/

Detail Map


 

Report

Polymorphisms Report

Target Strain  MSMv4  JF1v3  KJRv1  SWNv1  CHDv1  NJLv1  BLG2v1  HMIv1  BFMv1  PGN2v1
Gene Symbol (Gene ID) Nup153 (ENSMUSG00000021374)
Transcript ID ENSMUST00000021803
Reports
substitution
cSNPs9
Insertion30
Deletion38
SNPs
+1kb
5'UTR
CDS
3'UTR
INTRON
-1kb
Insertions
+1kb
5'UTR
CDS
3'UTR
INTRON
-1kb
Deletions
+1kb
5'UTR
CDS
3'UTR
INTRON
-1kb
coding sequence substitutions
premature termination by the nucleotide substitution0
synonymous num4
non-synonymous num5
synonymous substitutions 46683953 (p.Gly1264Gly), 46686747 (p.Glu1128Glu), 46687263 (p.Ser956Ser), 46693768 (p.Val728Val),
non-synonymous substitutions 46683979 (p.Pro1256Ser), 46684006 (p.Glu1247Lys), 46686901 (p.Gly1077Asp), 46687045 (p.Ala1029Val), 46727463 (p.Glu4Gly),
B6 transcript
(ENSMUST00000021803)
MASEAGGIGGGGGGGKIRTRRCHQGPVKPYQQGRPQHQGILSRVTESVKNIVPGWLQRYF
NKSENACSCSPDADEVPPWPENREDEHAIYADENTNTDDGRITPDPAGSNTEEPSTTSTA
SNYPDVLTRPSLHRSHLNFSVLESPALHCQPSTSSAFPIGSSGFSLVKEIKDSTSQHDDD
NISTTSGFSSRASEKDIAVSKNTSLPPLWSPEAERSHSLSQHTAISSKKPAFNLSAFGTL
STSLGNSSILKTSQLGDSPFYPGKTTYGGAAAAVRQNKVRSTPYQAPVRRQMKAKQLNAQ
SYGVTSSTARRILQSLEKMSSPLADAKRIPSAVSSPLNSPLDRSGIDNTVFQAKKEKVDS
QYPPVQRLMTPKPVSIATNRTVYFKPSLTPSGDLRKTNQRIDKKNSTVDEKSISRQNREQ
ESGFSYPNFSIPAANGLSSGVGGGGGKMRRERTHFVAPKPPENEEVEAPLLPQISLPISS
SSLPTFSFSSPVTSASPSPVSSSQPLPNKVQMTSLGSTGSPVFTFSSPIVKSTQAAVLPP
ASIGFTFSVPLAKTEFSGSNSSSETVLSSSAQDITAVNSSSYKKRSAPCEDPFTPAKILR
EGSVLDILKTPGFASPKVDSPALQPTTTSSIVYTRPAISTFSSSGIEYGESLKAGSSWQC
DTCLLQNKVTDNKCIACQAAKLPLKETAKQTGTGTPSKSDKPASTSGTGFGDKFKPAIGT
WDCDTCLVQNKPEAVKCVACETPKPGTGVKRALTLTVASESPVTASSSTTVTTGTLGFGD
KFKRPVGSWECPVCCVCNKAEDNRCVSCTSEKPGLVSASSSSPAPVSLSSGGCLGLDKFK
KPEGSWDCEVCLVQNKADSAKCIACESAKPGTKSEFKGFGTSSSLNPAPSAFKFGIPSSS
SGLSQTLTSTGNFKFGDQGGFKLGTSSDSGSTNTMNTNFKFSKPTGDFKFGVLSDSKPEE
VKNDNKNDNFQFGSSSGLTNPASSAPFQFGVSTLGQQEKKEELPKSSPAGFSFGAGVNNP
PNAAIDTTATSENKSGFNFGTLDTKSVSVTPFTYKTTEAKKEDAPATKGGFTFGKVGSSS
LPSSSMFVLGRTEEKQQEPVTSTSLVFGKKADSEEPKCQPVFSFGNSEQTKDESSKPTFS
FSVAKPSGKESEQLAKATFAFGNQTNTTTDQGAAKPVFSFLNSSSSSSSAPATSSSGGIF
GSSTSSSNPPVAAFVFGQASNPVSSSAFGNAAESSTSQSLLFPQESEPATTSSTAPAASP
FVFGTGASSNSVSSGFTFGATTTSSSSGSSFVFGTGHSAPSASPAFGANQTPTFGQSQGA
SQPNPPSFGSISSSTALFSAGSQPVPPPIFGTVSSSSQPPVFGQQPSQSAFGSGTANASS
VFQFGSSTTNFNFTNNNPSGVFTFGASPSTPAASAQPSGSGVFSFSQSPASFTVGSNGKN
MFSSSGTSVSGRKIKTAVRRKK*
MSMv4 transcript
MASGAGGIGGGGGGGKIRTRRCHQGPVKPYQQGRPQHQGILSRVTESVKNIVPGWLQRYF
NKSENACSCSPDADEVPPWPENREDEHAIYADENTNTDDGRITPDPAGSNTEEPSTTSTA
SNYPDVLTRPSLHRSHLNFSVLESPALHCQPSTSSAFPIGSSGFSLVKEIKDSTSQHDDD
NISTTSGFSSRASEKDIAVSKNTSLPPLWSPEAERSHSLSQHTAISSKKPAFNLSAFGTL
STSLGNSSILKTSQLGDSPFYPGKTTYGGAAAAVRQNKVRSTPYQAPVRRQMKAKQLNAQ
SYGVTSSTARRILQSLEKMSSPLADAKRIPSAVSSPLNSPLDRSGIDNTVFQAKKEKVDS
QYPPVQRLMTPKPVSIATNRTVYFKPSLTPSGDLRKTNQRIDKKNSTVDEKSISRQNREQ
ESGFSYPNFSIPAANGLSSGVGGGGGKMRRERTHFVAPKPPENEEVEAPLLPQISLPISS
SSLPTFSFSSPVTSASPSPVSSSQPLPNKVQMTSLGSTGSPVFTFSSPIVKSTQAAVLPP
ASIGFTFSVPLAKTEFSGSNSSSETVLSSSAQDITAVNSSSYKKRSAPCEDPFTPAKILR
EGSVLDILKTPGFASPKVDSPALQPTTTSSIVYTRPAISTFSSSGIEYGESLKAGSSWQC
DTCLLQNKVTDNKCIACQAAKLPLKETAKQTGTGTPSKSDKPASTSGTGFGDKFKPAIGT
WDCDTCLVQNKPEAVKCVACETPKPGTGVKRALTLTVASESPVTASSSTTVTTGTLGFGD
KFKRPVGSWECPVCCVCNKAEDNRCVSCTSEKPGLVSASSSSPAPVSLSSGGCLGLDKFK
KPEGSWDCEVCLVQNKADSAKCIACESAKPGTKSEFKGFGTSSSLNPAPSAFKFGIPSSS
SGLSQTLTSTGNFKFGDQGGFKLGTSSDSGSTNTMNTNFKFSKPTGDFKFGVLSDSKPEE
VKNDNKNDNFQFGSSSGLTNPASSAPFQFGVSTLGQQEKKEELPKSSPAGFSFGAGVNNP
PNAAIDTTVTSENKSGFNFGTLDTKSVSVTPFTYKTTEAKKEDAPATKGGFTFGKVDSSS
LPSSSMFVLGRTEEKQQEPVTSTSLVFGKKADSEEPKCQPVFSFGNSEQTKDESSKPTFS
FSVAKPSGKESEQLAKATFAFGNQTNTTTDQGAAKPVFSFLNSSSSSSSAPATSSSGGIF
GSSTSSSNPPVAAFVFGQASNPVSSSAFGNAAESSTSQSLLFPQESKPATTSSTASAASP
FVFGTGASSNSVSSGFTFGATTTSSSSGSSFVFGTGHSAPSASPAFGANQTPTFGQSQGA
SQPNPPSFGSISSSTALFSAGSQPVPPPIFGTVSSSSQPPVFGQQPSQSAFGSGTANASS
VFQFGSSTTNFNFTNNNPSGVFTFGASPSTPAASAQPSGSGVFSFSQSPASFTVGSNGKN
MFSSSGTSVSGRKIKTAVRRKK*
homology99.66 (1463 / 1463)

Exon Detail Report

Target Strain  MSMv4  JF1v3  KJRv1  SWNv1  CHDv1  NJLv1  BLG2v1  HMIv1  BFMv1  PGN2v1
Gene Symbol (Gene ID) Nup153 (ENSMUSG00000021374)
Transcript ID ENSMUST00000021803
No. Exon / Intron Start End Start Phase End Phase Length Sequence
5' upstream sequence
..........GCCCCTTAAATTTTCTTGGTTTCCATATAGTCCATTGAATGACTAGGCTG
GACCACATGATCACACAGACCTTTTGTCTAATGCCTGCATCTTTAACACGGTGTATCCGG
TCTTTGAGGATACATTGTTTAGTCACCTAACTATAATATTAACTGAAGCAAATATATGTT
TACTAGGGATATATGAGTCACCCTTAATGTGTGTTGATTGCATAGGTCATAATTGCAACC
ATTTACTGCGTTTCTTGTATACCAGGAAATCTACTGGGTGCTCTCTACACAGACGACCGC
ACTAGCTCCCCACAACTTTATAAGGTAGATTTAAATAGTAGAGTCATCCAAGGTCAAGTC
TGTAAGTAGTGAAGCAACTCAGAATGCCAGCACGGTGTGTGTTGACAACAAAGCCCTTAT
ATGTTTAATGAAACAGTAATGAAGTTGTATTTTTTGCTTTCGTTGAGACAGAATCTCACT
ATGAAGCTGAGGGTAATGTGTAACTAGCCATTCCCCTGTGTCTGCCTCCCAAGTGCCAAA
TGCCTTTCCTACTTTGTTTTTGGCCTGGGGATCGCGGCCACGGTTAATTTCAACGCGGTC
TCCCCCCCCCCCCCCCCGGATTGTGATGCATTATGGTTCTTTGATTTTACTGTTTACTTC
CATTCGGCTTATAATTGATGAATGGGAGATTACAGTATTCGTGTCGAGTGCCCTTCTGAA
TCTAAACAAGCAGCCAACCGCCGCCAAATGACCCGGGCTTTGTGCCTCTGCGGTGCTCCG
TGGGTGTCCTTCCGCTATCGCCTGCCTTTCCGAGAATCCGCGTTCTGGCCAGAAAAACTA
CATTTCCCAGAGGCTCCCACGACAGGGAGCGCGGGCTCGGCCAACCCTTCCTTCCTTCAC
CCATCCCCCCCCGCATTGTCGCAGCGTGATGACGCAAAGCGTCGGTCGCGGAGGAGTGAC
GGTGTTCTGGCTCGCGACCGGGGCGGCCGCCTCAACAGCGGTAATAGGCG
1 EXON 1 46,727,360 46,727,940 - 0 581
CAAGAGCGGCGGCGGCGGCGACGACTGCAGGGACGACGACGGCGGCGGCGGCGGTGGGGC
GGGCGCAGCGCGCACAGGGGGAGGGGTTGGCGGGCGGCGCCAGCGGCCTGGACTGCGGCA
GCGACGGCCAGGGCGGCTGAAGAGGAGCCTCTAGCAGCGGGCGGTCGAGCTAGGCCTCAG
CGGCGCCCGGAGCTGCTCGCGCCGGCCTCGGCGGGAGATCTCCATAGAGACGGTGACAAA
CACAGACGCGGGGGTCCGCACGCGGCCGGCGCTCCTCAGCCACCTCGGGGCCCTCAGCCG
CCGCCACCGCCTTCCTCGCCGCCGCGCGCACTCTCAGTTCCCGCTCGCTCCCTCGCGGTT
CTCGCTGTGTCTGTGTGTCGCCTAGGGCCGGGCGGGGGAGGCCCTCAGGCCGCCGCCTCT
GCCTCTCCCGCCCGGGAGCGGTAGTGGGAGGCCGCCCAGGCTCCGCCATGGCCTCGGGAG
CCGGAGGCATAGGAGGGGGCGGCGGCGGCGGCAAGATCCGGACTCGTCGTTGCCACCAGG
GGCCGGTGAAGCCTTACCAACAGGGGCGACCCCAACACCAG
INTRON 1 - 2 46,717,324 46,727,359 10,036
GTACGGGACCGGTACGCCGTGGCGA..........TCTTAATGTATGTTTTCTCCAACAG
2 EXON 2 46,717,101 46,717,323 0 1 223
GGCATTCTTAGCAGGGTTACAGAATCTGTTAAGAATATTGTACCAGGGTGGCTACAAAGA
TACTTCAACAAGAGTGAAAATGCTTGCAGCTGTTCACCAGATGCAGATGAAGTTCCACCC
TGGCCAGAAAATAGAGAAGATGAGCATGCGATTTATGCGGATGAGAACACAAACACTGAT
GATGGGAGAATCACCCCTGACCCTGCAGGCAGTAACACAGAAG
INTRON 2 - 3 46,713,870 46,717,100 3,231
GTAAATACTGTGGATATTTGGTTAC..........AATGTTAACTATTCATTCTTTTAAG
3 EXON 3 46,713,621 46,713,869 1 1 249
AACCATCAACAACCAGTACTGCTTCAAATTATCCAGATGTGTTAACAAGACCTTCTCTTC
ATCGGAGTCATCTGAATTTCTCTGTGTTGGAATCCCCTGCTTTGCACTGTCAGCCGTCCA
CATCCTCTGCGTTCCCAATCGGCAGTTCTGGATTTTCCCTTGTGAAGGAGATTAAAGATT
CTACCTCTCAGCATGATGATGATAACATCTCAACTACCAGTGGGTTCTCTTCAAGAGCTT
CTGAGAAAG
INTRON 3 - 4 46,712,981 46,713,620 640
GTACTCAAAGGTCTTTGTAACCATG..........TACAAATTATAAATTTTTATTTTAG
4 EXON 4 46,712,841 46,712,980 1 0 140
ATATAGCTGTTTCAAAGAACACTTCCCTGCCACCTTTGTGGTCCCCTGAAGCAGAACGTT
CTCATTCACTCTCACAGCATACTGCCATCAGCTCCAAAAAACCAGCATTCAACTTGTCTG
CCTTTGGAACACTTTCCACC
INTRON 4 - 5 46,712,762 46,712,840 79
GTGAGTACTAACTATAATGGGTATA..........AATTTATCACTGTTTTTCTATGCAG
5 EXON 5 46,712,633 46,712,761 0 0 129
TCACTTGGGAATTCTTCAATTCTTAAAACAAGTCAGCTTGGAGACTCTCCTTTTTATCCT
GGCAAAACAACATATGGAGGGGCAGCTGCTGCTGTAAGACAGAATAAAGTACGAAGTACA
CCTTACCAG
INTRON 5 - 6 46,710,029 46,712,632 2,604
GTTAGTTTGAGTAGAATTGTTGATA..........AGTAACACAGACTTTTATTTTCTAG
6 EXON 6 46,709,912 46,710,028 0 0 117
GCTCCAGTTAGAAGACAGATGAAAGCTAAGCAGCTCAATGCACAGTCTTATGGTGTGACC
AGCTCAACAGCACGGCGGATACTGCAGTCATTAGAAAAGATGTCGAGCCCTCTTGCG
INTRON 6 - 7 46,709,811 46,709,911 101
GTAAAGTTTGAAATCATGAGATGTA..........TTTTTTGTTATTGTAATGTTAACAG
7 EXON 7 46,709,766 46,709,810 0 0 45
GATGCAAAAAGAATTCCATCTGCAGTTTCTTCTCCTCTGAATTCT
INTRON 7 - 8 46,709,683 46,709,765 83
GTACGTTCACTTTTAAATCTTACAT..........AACACTATTTCTCTCCTTTTTTCAG
8 EXON 8 46,709,629 46,709,682 0 0 54
CCTCTTGATAGGAGTGGGATAGATAACACAGTTTTTCAGGCAAAAAAAGAAAAG
INTRON 8 - 9 46,707,894 46,709,628 1,735
GTAAGCTGTGTAAAATGTCAGCAGC..........GTTTTGATTTCTGTTTTCTTTTAAG
9 EXON 9 46,707,747 46,707,893 0 0 147
GTGGACTCTCAGTATCCCCCTGTTCAGAGACTAATGACCCCAAAGCCAGTTTCCATAGCA
ACAAATAGAACTGTCTATTTTAAACCATCTCTGACCCCATCTGGTGACTTAAGGAAGACT
AATCAAAGGATAGATAAAAAGAACAGT
INTRON 9 - 10 46,705,216 46,707,746 2,531
GTGAGTTTGTTTGTTTATTCTGTTT..........TTCTTATACTGTTTTTTTCTTTCAG
10 EXON 10 46,705,169 46,705,215 0 2 47
ACTGTAGATGAAAAAAGTATCTCAAGACAAAATAGAGAGCAAGAAAG
INTRON 10 - 11 46,704,767 46,705,168 402
GTAATGATATCTCATATGCTGCAAC..........TTCTAATTTTCTTTTTATTTGCTAG
11 EXON 11 46,704,640 46,704,766 2 0 127
TGGCTTTTCATACCCCAATTTCAGTATTCCTGCAGCCAATGGTTTATCTTCTGGAGTAGG
TGGTGGAGGTGGCAAGATGAGAAGAGAGAGAACACATTTTGTTGCTCCTAAACCTCCAGA
GAATGAG
INTRON 11 - 12 46,701,739 46,704,639 2,901
GTAGGCTATATTTTATAGAACTGAA..........CCTTACAAAACATGCTGTGTTTTAG
12 EXON 12 46,701,604 46,701,738 0 0 135
GAAGTGGAAGCACCATTGTTACCGCAAATCTCTCTACCAATCAGCAGTTCTTCACTGCCC
ACCTTCAGTTTTAGTTCCCCTGTGACCTCGGCTTCTCCTTCACCAGTCAGCTCTTCTCAG
CCATTACCAAACAAG
INTRON 12 - 13 46,701,088 46,701,603 516
GTATAGAACCACTGTATAAGTGAGG..........AAAAAAAAAAAAAAACCCAAACCAG
13 EXON 13 46,700,989 46,701,087 0 0 99
GTACAGATGACCTCTCTGGGCAGCACGGGCAGTCCTGTGTTCACATTCTCATCTCCCATT
GTAAAATCCACGCAGGCAGCTGTGCTCCCTCCAGCATCT
INTRON 13 - 14 46,699,734 46,700,988 1,255
GTAAGTACCAAACAAGAGCAGACAG..........TGAAAATTACCTTTTCTTGTTATAG
14 EXON 14 46,699,649 46,699,733 0 1 85
ATTGGATTTACATTTAGTGTGCCTCTTGCAAAAACTGAATTTTCTGGCTCTAATAGTTCT
TCAGAAACAGTTTTAAGTAGTTCAG
INTRON 14 - 15 46,696,769 46,699,648 2,880
GTAAGTGAAAAAATATTTCACATTC..........CTCTTTTATAATTTAAAAATTACAG
15 EXON 15 46,696,646 46,696,768 1 1 123
CCCAAGATATCACTGCAGTGAATAGTTCAAGCTATAAGAAGCGAAGTGCTCCTTGTGAGG
ACCCCTTTACACCTGCAAAGATCCTGAGAGAAGGAAGTGTTCTAGACATTCTGAAAACAC
CTG
INTRON 15 - 16 46,694,118 46,696,645 2,528
GTAAGTGAACAGCTGCCCTTGTGAT..........ACATTCTTTTCTTTCTTCACTGTAG
16 EXON 16 46,693,512 46,694,117 1 1 606
GTTTCGCATCACCAAAGGTTGATTCTCCTGCTCTTCAACCCACTACCACAAGCTCAATAG
TTTATACAAGACCAGCAATAAGTACTTTTTCTTCTAGTGGAATTGAGTATGGAGAAAGTT
TAAAAGCTGGATCATCATGGCAGTGTGACACATGTCTCCTCCAGAACAAAGTCACAGACA
ATAAGTGTATAGCCTGCCAAGCAGCAAAACTGCCCCTGAAAGAAACTGCTAAACAGACTG
GGACTGGGACACCAAGCAAAAGTGACAAACCAGCCTCTACATCAGGGACAGGCTTTGGAG
ATAAATTTAAACCAGCAATAGGAACTTGGGATTGTGATACCTGTTTAGTACAAAATAAGC
CCGAAGCAGTAAAATGTGTAGCCTGTGAGACACCTAAGCCTGGCACTGGTGTGAAGCGAG
CCCTTACATTGACAGTGGCTTCAGAAAGTCCTGTGACTGCTTCCTCTTCTACCACTGTGA
CAACTGGTACACTAGGATTTGGAGATAAATTCAAAAGGCCTGTGGGCTCTTGGGAGTGTC
CAGTCTGCTGTGTTTGTAATAAGGCAGAAGACAACAGATGTGTTTCCTGTACATCTGAGA
AACCAG
INTRON 16 - 17 46,689,251 46,693,511 4,261
GTACGTTTTATGTCTATATGAAATA..........TGCCTCCATTTCCCAATTCTTTTAG
17 EXON 17 46,689,059 46,689,250 1 1 192
GTTTGGTATCTGCCTCAAGCAGCAGCCCTGCCCCTGTCTCTCTGTCTTCTGGAGGCTGTT
TAGGATTGGACAAGTTTAAAAAGCCCGAGGGAAGCTGGGACTGTGAAGTGTGCCTAGTGC
AAAATAAAGCAGACTCTGCCAAGTGCATAGCTTGTGAAAGTGCAAAGCCAGGCACAAAGT
CTGAGTTTAAAG
INTRON 17 - 18 46,687,499 46,689,058 1,560
GTGAGGCTATGGTAAAGAACCCCTT..........TTTTGTGTGTTGTCTGTTTTTGAAG
18 EXON 18 46,686,623 46,687,498 1 1 876
GCTTCGGGACATCTTCATCTTTAAATCCAGCACCCTCAGCCTTCAAATTTGGTATTCCAT
CGTCCTCTTCTGGGCTTTCTCAAACTTTGACAAGCACTGGAAATTTTAAATTTGGAGATC
AGGGAGGATTCAAATTAGGCACTTCATCTGACTCTGGGTCTACAAACACCATGAATACAA
ACTTTAAATTTTCTAAACCAACTGGAGACTTTAAATTTGGAGTGTTATCTGATTCCAAAC
CTGAAGAAGTTAAAAACGACAACAAGAATGATAATTTTCAGTTTGGATCTTCTTCTGGCT
TAACCAACCCAGCTTCTTCAGCTCCGTTTCAGTTTGGGGTATCTACTCTTGGGCAACAAG
AAAAGAAAGAGGAGCTGCCTAAATCTTCACCTGCAGGCTTTAGCTTTGGTGCAGGTGTTA
ATAACCCCCCTAATGCTGCTATTGACACCACAGTGACCTCAGAGAACAAGAGCGGCTTCA
ACTTTGGAACCCTAGACACAAAGAGTGTCTCAGTGACTCCTTTCACATACAAGACAACAG
AAGCAAAGAAAGAAGACGCACCTGCTACCAAGGGTGGGTTCACATTTGGTAAAGTGGACT
CCTCTTCTTTGCCATCTTCCTCAATGTTTGTTTTGGGAAGGACAGAGGAGAAACAGCAAG
AACCTGTTACTTCTACTTCTCTGGTGTTTGGGAAGAAAGCCGACAGTGAGGAGCCAAAGT
GTCAGCCAGTATTTTCCTTTGGGAATTCAGAACAAACCAAAGATGAGAGCTCCAAGCCGA
CATTCAGCTTCAGTGTGGCAAAACCATCTGGGAAGGAGTCTGAGCAGCTAGCCAAGGCTA
CTTTTGCATTTGGAAATCAAACCAATACAACAACTG
INTRON 18 - 19 46,684,237 46,686,622 2,386
GTAAATAGTAAAAGACTTTTTTTCT..........TTGTTTCTCAATCATTGTTTTGCAG
19 EXON 19 46,683,883 46,684,236 1 1 354
ATCAAGGTGCAGCAAAGCCAGTTTTTAGCTTCTTGAACAGCAGTTCCTCTAGTTCAAGTG
CACCAGCCACTTCATCTAGTGGTGGCATATTTGGTAGTTCCACCTCTTCCTCCAACCCAC
CTGTGGCAGCCTTTGTGTTTGGACAGGCCAGCAATCCTGTCAGCAGCTCTGCCTTCGGTA
ACGCTGCTGAATCCAGTACATCTCAGTCTTTGCTATTTCCTCAAGAGAGCAAGCCAGCCA
CCACGTCCAGCACTGCCTCAGCTGCCTCTCCCTTTGTATTTGGAACAGGAGCCAGCAGTA
ATAGTGTGTCTTCTGGGTTCACTTTTGGGGCTACAACCACGTCAAGCTCTTCAG
INTRON 19 - 20 46,683,270 46,683,882 613
GTACTTTTGTGCTATGAGAGAAAAA..........GATTTAACTATTTCTTGGCCTCCAG
20 EXON 20 46,682,997 46,683,269 1 1 273
GATCCTCCTTTGTATTTGGCACTGGACATTCAGCACCATCTGCCAGTCCAGCATTTGGTG
CTAACCAGACTCCAACATTTGGACAAAGTCAAGGTGCCAGCCAGCCTAACCCGCCAAGCT
TTGGCTCTATCTCGTCTTCAACAGCATTATTTTCTGCTGGTTCTCAGCCTGTACCACCAC
CTATATTTGGGACAGTGTCAAGCAGCAGCCAACCTCCTGTGTTTGGACAGCAGCCTAGTC
AGTCTGCATTTGGCTCTGGGACAGCTAATGCCA
INTRON 20 - 21 46,681,693 46,682,996 1,304
GTAAGTTTGTATGATAGTTGATATC..........GATATTTTCTGCTTAATTTGTATAG
21 EXON 21 46,681,524 46,681,692 1 2 169
GTTCGGTTTTCCAATTTGGTAGCAGCACTACGAATTTCAACTTCACAAACAATAATCCAT
CAGGAGTGTTCACATTTGGTGCAAGTCCCAGCACGCCTGCAGCCTCAGCCCAGCCCTCAG
GTTCAGGGGTCTTTTCATTCAGCCAGTCTCCAGCATCATTTACAGTGGG
INTRON 21 - 22 46,681,243 46,681,523 281
GTAAGATTATTTCATTGAGAATTTA..........TTGTAATGTTTTTATTTTTTCACAG
22 EXON 22 46,679,905 46,681,242 2 - 1,338
GTCAAATGGGAAAAATATGTTCTCTTCTTCCGGAACTTCAGTTTCTGGTCGCAAGATAAA
GACTGCTGTTAGACGCAAGAAATAAAGGTCACAAAGGTGTTATACCCAACAGTTTTATCA
ACAGCTGGTGCCCTGCTTTCAGATACTGGATTGTACTACATGCTGGGCTTATCTGAAGTC
AGATCTGCCTAAGGACTTCTTTAATTTTGGAATTGTCCTCTTTTTTTTCTTTATGGAAGT
CCTGTCCCCATAACCCATTCTCTTTTTGAAAATAATAGCTAGACTGGTGACTGACTGATT
CTTCAGCAGAAACATTTTATGATCCAGCACATTATTCACTGATTGGCATAGTCTGGCTGT
ACCCAGGAATAGAGCCTGCACGGTGAATGGCTTTGTATAGAACCTGTCTGCACCGCTATG
TGCATTGATAAAGCGTTAATGGAGCGTGTTGAAATTGTAATTATATCTGGGGAATTCTGT
ATAGATTAGAATCCTGTATAGATTAGAGGACGTTGAAATGAATGATTTCTATGCGGAGTT
TGTGGTGGTGTATGTGTGAAGTGAGTAAGTGGGACGTATTGTGCACAGAAAAATTCTGAT
AGAGAAAACCTGATTAAAGAATGGTCCATCCTAAGGACTTGTTAGATCTAGTTCATTCTC
CACTTAATAAGTATATGCTATTTCTATATTTTCATTCTATCAACTGTCTTGCCTTTTTCA
TTATTTTATTATGAGACTTCTGTAAATACAATTTTGTTTCTGTACCTTTTTGGCATAACA
TAAATCTGTGAACTTGAAATTTTAATTTTATGTTAGACATATTTTTGTTGTTTGTTTAGT
CTTGTCTCAGATTTTATTATGTAAATCCCATTATTCAAAGTTGCCTAAATCCATTTGGAA
ATCTTTAAAAAAAATTGGGGATTCTTAAAGTTGAATTTATTGGCTTTTCTGATCCAGTTT
TGTTTGGACCAAAAACCAGTATTGTACAAAGTATTAAGCATATATTTTTATATTTACTGA
AATGGACTGTGGTGACTTTGGATAATAAGGAAAAAGTTTAATATTAAAGCCATGTTTATT
ACAGTATAATTAACATGTTAAACCATGGGATAAATGCCATCAATAAAACTTTATGAAGCA
AATTTGTTAACAGTTTTCATAGTGAAGGCACACAATATTAATGGGAAGGGTGGTTGATTA
GAAACCCCAAAGGGTATGTATCAGGTAAGGCCCAAGAGTTACTGGCGTTTGCAGAACACA
GAAGATCCCCTCCTTTCTGCCTGCTGCTGTCTTTACTTAATTTGCACGTATATTTTCTCA
TTAAATTTTGAAAATAAA
3' upstream sequence
CGTACAACCCTTTCTGTTTGTACTTCTAGCTTCCTTGCTAGGTGCCTAGACAATGTTTAT
TGCTCACATTCTTGGAGATAATATGCCTCAGGCACTCCAACAGTTTATAGAACTAATGGG
CCTTTTACTATGTTATTTGTATGATTAGACTTTTAGCTCTCTTCAGGTCCAGGAAAGAAC
TTGGAGCAGTACTTTATACTTTTGTCCTTCATTAGGATTGGCATTTGTTAGTGGTGTTTT
TCTGTTTTGTTTTGTTTGCAACTACAGGCTGGTTGAATTTACATGGAGAATTTCTAAAGC
TTTGTTCTTATGAAAAGATATTTTTCTTACTATCTTAGGCTATCATTACATTGATCTGAG
GGCAGAGCTTTTTATGTTTCTAATATTTTATTTAATAATATATACCTGACCTGTTTGGAG
TCTGGTGAATGCTGGTATCAAATGCTGGAAACCTGACTTTACCCACTTTGTCGGCCAGTC
CTTCACCATTTTCTATGTCCAAATAATTGGGGCTTAATAGAGCATATGCCTTTTCTGTAA
ACTGTAGAAAATAATTTTGCTTCATTTTAGTATTCCTTTGTTTAGAGTAGGTTACTACAG
TTATAACTAGTGCTGGTTCATATTAAAATTGGTGACCTTTTGGTTCTCTAGAGTCTGTAA
GACTATTCAGATTTTGAGACTTGATTCTTGGGCACACTTCTAGCTTCCTTGCTAGGTGTG
TGTGGCTTTCCGGTCATGGTGGCAGCCCCATCTCTTGGTCTGTCCTTCCTCAAGCCCAGC
AGAGGTAACTAACTCTACATTGGATTGAGTGGGCTTGAGTGCTTACTAGTGGAATGTATA
AATGTTCTAGGACATATACCCAGAGACTGACAGACTGGTTTTGGTTAGCATTCAAGACTG
CATCATTAAAGGTACCTCAAGTCACTTAATGCTGTCAGGTCTGGTTATATCATTTTAAGC
ATTAAGTGCTAGGTTGGTTGTAGTGATTACAGTATCAGGC..........

Sequence Detail Report

Gene Symbol (Gene ID) Nup153 (ENSMUSG00000021374)
Transcript ID ENSMUST00000021803
SNP Information
Strain :
Sequence Retrieve :
Exon translate :
CDS Start ( 1 ) - End ( 1463 )
-
Strand : forward reverse
Show sequence : nucleotide amino acid
Color information