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|
5' upstream sequence
|
|
|
|
|
|
..........TTCTGCTGATTATAATCAAGTCATAAGCCCCAAACGCAGCGTTCACACAC
TCTTGAGGTCATCGTTCTCCCAGAACACTGATTCAAGTTCACATTTCAGGACGTCTCCCA
CCACGTTCTTGAGCATGGGTCTTGGGGGGGTGAGGGAGTCGGAGTCCAGAACTGTCATAA
GGTTGAGAGGTCCGCGGGGTGCTACAGGGCATGGGCTGGGAGGGATGGACGCGAGCCACG
TACCAGGCTCCGGACGCCTTCTCCCCGGCGTTTTGCAGCATTCTGCACTCTCGCTGCAGC
GCTGCGACCTCCGCCTCCAGGGCGCGCAGTTCGCGGGTCTCGGAATCCATGGCTACCGAC
GTGGAACCCTGAAGGTGAAGTAGCCCGGAGAATGGCAGTCTGGGCGCCTCGGGCAGCCAG
GAGACTTCAAGGAGCGCGCGCGCTCCTGGAACGGACCACTCTCGAGCTCACGGGGGGAGA
GGCTGCCGGGAGTCGCGCGTCCACTCCCACGGCCTCGGACGACGTTCCCGAGCCTGACGG
CCCGCGAAATGTCGCGTCGAGCGTCTAGACACCCCCGCCGCCTCTGCGAGTTGGTTCGTT
CCAAATTGCACGTCACCCTCCAACGGCCGCCCACCCCGTCTAACGGCCACTGGGCCAGCC
GAGCTCTTACGTCACCGAAGGGGGCGGATTCTCGGAAGCACGAGGAAAGGAGTCTCTTTA
TTTTGGTTCCGCTTCTTCACTTCCGCCTACTTGAACCGGAAATCAGGAACCACGCGACGG
AGTGTCTTTTCTGTAGGAATTACCGATTTTTATTTTTCTTTCTCACACTCTGTCAGTTTT
ACAACGTGGAGGAGAACTAACAGAACGTCAGTAAAAGCGAAGGCGGAGGAAATAAAGAGC
CCTCTGGAACTGCGGGATAACGGAACCTTAGGAGATTGGGTTGGAAACTTTGTAGGAAGG
AAAGGAAAATGCACTTGCCGGCACGTGTTATTAGACGTTAAGTGCTACGC
|
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1
|
EXON 1
|
49,653,350
|
49,653,397
|
- |
- |
48
|
CGGGCTTGAGCTGAGTCGGACTAGCGCCCTGAGGAAGAGTGTTTGCTC
|
|
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INTRON 1 - 2
|
49,653,398
|
49,653,528
|
|
|
131
|
GTGAGAAGTGATGGGCTATTGGGCT..........GGTACACTGTAGGTTTTTTTCCCAG |
|
2
|
EXON 2
|
49,653,529
|
49,653,682
|
- |
1 |
154
|
AGTGCTGGCCTTTGCTTTGGGCTTCTGCCGCTATTTAGTGATCTCGCTTGGAAGGAGACA GCCAACTTTTGAGAAAGGTTTGAGTAAGAGCTGAACATCTGCCGAGAGCTAAACGAGATG GAGCGACCTCTGGAAAACGTTTCCAGCAATCTTG
|
|
|
INTRON 2 - 3
|
49,653,683
|
49,654,346
|
|
|
664
|
GTAGGATAGTGTTAACAATTCCGGG..........TTCTGTCCAAAATTAACTTTTCCAG |
|
3
|
EXON 3
|
49,654,347
|
49,654,502
|
1 |
1 |
156
|
ATAGATGCCCAACATCCATGCAAGGCAACAGAGAAATGAAGCGCCTCTTTGTGGGTGGAC TTGGACAGGGCATTTCTGAGACAGACCTACAAAATCAGTTCGGCAGATTTGGAGAAGTTT CTGACGTGGAGATCATCACTCGGAAAGATGACCAAG
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|
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INTRON 3 - 4
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49,654,503
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49,655,172
|
|
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670
|
GTAAATCTGTAACACGAGGGAGTTA..........TTAAAAATTTTTTTTTTTTTGGTAG |
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4
|
EXON 4
|
49,655,173
|
49,655,235
|
1 |
1 |
63
|
GAAATTCACAGAAAGTCTTTGCGTATGTTAACATTCAAATAACAGAAGCGGACCTGAAGA AAT
|
|
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INTRON 4 - 5
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49,655,236
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49,656,674
|
|
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1,439
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GTAAGATCATCATGTATTTTTTTAT..........ACTTTGTTAATTCTTTACCTTATAG |
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5
|
EXON 5
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49,656,675
|
49,656,753
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1 |
2 |
79
|
GTATGTCTATTTTAAACAAAACAAAATGGAAAGGTGGAACACTACAAATTCAGCTAGCAA AAGAAAGCTTTTTACACAG
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|
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INTRON 5 - 6
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49,656,754
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49,658,695
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|
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1,942
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GTAAGATTTGCCTCACATTTATTTA..........TGTTTTTACTTCTACTTCACTTCAG |
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6
|
EXON 6
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49,658,696
|
49,658,831
|
2 |
0 |
136
|
ATTGGCCCAAGAAAGAGAAGACGCAAAAGCAAAGAAAGAAAAATCAACAACAGGCAACCC CGCCTTATTGGAAAAGATGGGAGCAGTGGATTTCCATATGAAGGCTGTGCCTGGAACAGA AGTACCAGGGCATAAA
|
|
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INTRON 6 - 7
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49,658,832
|
49,659,949
|
|
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1,118
|
GTGAGTCCTTCAGTAGACCGTGCCC..........TCTCTCTCTTTTTTTAATCTTTTAG |
|
7
|
EXON 7
|
49,659,950
|
49,660,018
|
0 |
0 |
69
|
AATTGGGTTGTGAGTAAGTTTGGAAGAGTCTTACCTGTTCTTCACCTTAAGAATCAACAA AAACATAAA
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|
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INTRON 7 - 8
|
49,660,019
|
49,660,957
|
|
|
939
|
ATATCCTTTGGTTGGCATTTCACAG..........CTTGCTTTGTCCTTGACTGAGTAAC |
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8
|
EXON 8
|
49,660,958
|
49,662,775
|
0 |
0 |
1,818
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ATTATGAAATATGATCCATCAAAATACTGCCACAATATAAAAAAGATTCCAGAGAATTTG ACAGAAACCACTCCCATAGCTGAACTCACTTGGGAATTGGAAGGAGGCAATGACCCTATG AGTAAGAAACGTCGAGGAGAGTTCTCTGACTTTCATATCCCTCCTCAAAAGGTCAAGAAA GTGCGGAAGAGCAATGATCCCATGGAGTCCAAGGTTTCTAATATTGGTCTAAGGACTAAT CAGGTAATGGGGAGGAACAAATCAACACATCCTGTGACTGCACACGGGACAGCCCCTAGT ACTGTTAATCCTCCCAAACCACTCCCTGTGTCCAGTTCTGGAACTCAGAAACCTAAACAT GTGGTTTTTCATAATTCTGACTTTGAAATTATCTGGAATAAAAGTAGCATGTCTGATGAT GACGTTGACTCGGAAGATGAATTAAAAATGATGATTGCAAAAGAGGAAAACAGAGAGAAA CCTGGGCATTCCTCAGTCAATGAGTCTGAACATGATACTTTTGAAGTTGTTAGGGATGAT TTCAAATCAAATATTCACAAGCTTTCTTCTTCAGCAAGCCTAGGAAATAACCATGAATAT GATTCAAGTGATACAGATGAAATTATTGCAATGAAAACAAACAATGCTAAGGTCAAAAAC AGTGCAGAATCTTCACAACCAGAAAGGACTGTAAGCAAGAAAAGTTCTTTTCAAAAGATA GAACCTTCTAATGACTGTATAAAAGTACAAGGAATTAACAGCAACAAAGAATCAGCCCCG TGTCATGGAGTAAAGTTTGTAAATCCCAAATTTCCACCTGACTCCAGTGGCAGTGACAGT GAAGAGTCCGAAGAAGATGAAGAATATAAAGTCTTGATGGAAAACTGTCCCCGTGTGAGT CTCACTTTGGCTGACTTGGAGCAGTTGGCTGGCAGTCATCGGAAGTTTCCAGGAAAAGAC AGTGAGACTAATGGTCCACAAAATGACAGTCACTGCAAATTTGACACAACCTCCAAGAAT CCCAAGACTTCTGGTGACCTGTACAATGGCAGACAACAGTGCATTCTTCCTGAGGAGATT GTGGCCTCCCTTTTAGAGGACGAGAATACTTACAGCAAACAAAAATCGGAGGAAGATATC TTAAAGCCAAAATTCCAGGCCTTCAAGGGAATAGGCTGTCTCTATGTAAAGGAGTCAGTA GACAAAACTTTGAAAGAGAATATTGCCTTTAATACTGGCGGTGGGCATCACAGTTCCTTA AAACATGAAGATCACAATAGAAGTTTGATGGAAAATGGATCTAAGTGTGTTAATGGCTCA TCAAGCAAACTGACTTCATGCCAACCTGCAAAGAAGGTGAATGACCCGAACCACATTCAG CCTCCAAAAAGACAGTGTACTTTTGAGAACCAGAACCATAAAGTAATGTCCTCTACTAGT TGTGACAAGGGAAGTACAAATCCTCTCCCAGGTCCGTTGCCATTGAAAGCTAAAACATCC CTGCATCTTAGTGCCAACAGTCACAAGGTAGACTCTGATGGAGACGCTTGCCATTGGCCT GAAAGTAGAAAAGCTTTAGAGAAAGAGAGGACCAATTTAAGCAACCTCGAATCTCTTGAG AAATCATCAAAGGTGTCTCCCAGGGAAGACCCTCAGAAAAGCCCAGCTGGTTTCTCACTT TCTGATAGTAATGCATCCTGTATAAATGCTAAGGATAAACAAGCTGAAGACAACCAGAAG CGATTGGCCGCCTTGGCAGCATGGCAGAAAGCCAGGGAAGTACAGAAAAAACTGGTGCAT AGTGCCCTGGCAAATTCG
|
|
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INTRON 8 - 9
|
49,662,776
|
49,664,053
|
|
|
1,278
|
GTGAGTGCATTTTCATTCTACAGAT..........TGTAATGCTGCTTGTGTTTCACTAG |
|
9
|
EXON 9
|
49,664,054
|
49,664,167
|
0 |
0 |
114
|
GATGGTCATCCAGAGGACAAAAAAACACACATTGTCTTTGCTTCTGATAATGAAAGTGAA ACGGAAGAGACATCCACTCAGGAGCAAAGCTGTCCAGAAAAGGAGCTGATGAAA
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|
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INTRON 9 - 10
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49,664,168
|
49,664,727
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|
|
560
|
GTAAGGCCTTCCAAACATTAATCTA..........ACTAATGTTTTTCTCTGCATGGCAG |
|
10
|
EXON 10
|
49,664,728
|
49,664,850
|
0 |
0 |
123
|
GAATCTGTGAGTAAATCGTCTGGGAAGCTGTTTGACAGCAGTGATGATGAAGACTCAGAC TCCAAGGAGGACAGCACCAGGTTCAGCATTAAACCTCAGTTTGAGGGCAGAGCTGGCCAG AAG
|
|
|
INTRON 10 - 11
|
49,664,851
|
49,665,378
|
|
|
528
|
GTTAGCCAATAACCAATACAGTTTT..........TGACAATGTTTTTTTTTTTGTGTAG |
|
11
|
EXON 11
|
49,665,379
|
49,665,469
|
0 |
1 |
91
|
CTTATGGATCTGCAGTCTCAGTTTGGAAGTGATGAGAGATTCCGCATGGACTCTAGATTT TTAGAGAGTGACAGTGAGGACGAAAAGAAAG
|
|
|
INTRON 11 - 12
|
49,665,470
|
49,667,354
|
|
|
1,885
|
GTAACTATTTTATTGTTCAAACAAT..........ATTACTAGTTATTCTTCTTCCCCAG |
|
12
|
EXON 12
|
49,667,355
|
49,667,490
|
1 |
2 |
136
|
AGCTAAATGAAGATAAAGTGAATGAAGACGAGCTTGCTGCAGAAAAAAAGAAAACCCTGA ATGTTGTGCAAAGTGTTTTGAACATCAATGTGAACAACCCAACGAACAAAGGATCAGTGG CTGCTAAGAAATTTAA
|
|
|
INTRON 12 - 13
|
49,667,491
|
49,669,708
|
|
|
2,218
|
GTATGGCTTATGGCATGTCGCATTC..........TCCAATCTTTATTTGTTCTACACAG |
|
13
|
EXON 13
|
49,669,709
|
49,669,786
|
2 |
2 |
78
|
GGATATCGTACATTATGACCCAACAAAGCATGACCATGCCATTTATGAAAGAAAACAAGA AGATAAAGAAAAAGAAAG
|
|
|
INTRON 13 - 14
|
49,669,787
|
49,672,551
|
|
|
2,765
|
GTAAATTGGAGTCTGTTTTCCATTC..........ATGTTCATGTCCGTATGTCTTTCAG |
|
14
|
EXON 14
|
49,672,552
|
49,672,823
|
2 |
1 |
272
|
TAAGGCAAAACGGAAGAAGAAAAAGGAAGAAGCTGAGAAGCTGCCTGAGGTATCCCAAGA CATGTATTATAACATTGCTGCAGATTTGAAAGAAATATTCCAAAGTATGAACAACACAGA TGAAAAGGAAGAAGATGTGCCCAGGACTGAGGCTGGTGCTAGAGAGGGGACTGGAAAAAT CAGGAACGCCGAGACACTGGCATGTGAGCCCGAGCAAACCACTGGCTTTACATTCTCTTT TTTTGATTCAGCCACTAAAGATGAAAAGGATG
|
|
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INTRON 14 - 15
|
49,672,824
|
49,675,385
|
|
|
2,562
|
GTATGTTTTTTTTTCTACTTTTTTA..........ACCTTTTATTGTCATAATAATATAG |
|
15
|
EXON 15
|
49,675,386
|
49,675,512
|
1 |
2 |
127
|
CCACCTATAAAATCGAACTAGTGAAACATGGGAAGATAGTCTGTCCAAATGATCCCCGAT TCCAAGACAGTAGTTCAGAAGAAGAAGATATTGCTGAAGAAGCAGATCACAGCAAGCCAA GCCCTGG
|
|
|
INTRON 15 - 16
|
49,675,513
|
49,676,321
|
|
|
809
|
GTAAGCTGTTTATGTGTAAGCATGT..........TGCCCTTTCTCCCTCGTGTTTTCAG |
|
16
|
EXON 16
|
49,676,322
|
49,676,389
|
2 |
1 |
68
|
AGAAGCGGTTCCTGAGAACGAGGCCATTAGATTTTTCTTTTTCTCTGAGAATGACGACAG ACTTCGTG
|
|
|
INTRON 16 - 17
|
49,676,390
|
49,676,754
|
|
|
365
|
GTAGGTCCATTCTTCCATTCAGTGG..........CCTCATGCTTCTGTTTTTCCCATAG |
|
17
|
EXON 17
|
49,676,755
|
49,676,834
|
1 |
0 |
80
|
GTTCTAACTTATTCTGGAGTGGTGTGGGAGGTAGTATTAGCAGAAATTCTTGGGAAGCCC GAACAAGTAGTCTCCTTTTG
|
|
|
INTRON 17 - 18
|
49,676,835
|
49,678,385
|
|
|
1,551
|
GTGAGTTACGTTTCTCCGTATTGAT..........AGCTTCTTATTTTATGGTTTTTTAG |
|
18
|
EXON 18
|
49,678,386
|
49,679,015
|
0 |
- |
630
|
GAATGTCGGAAGAAACATAAAGAAGCCAAAAGGAAGGTGAAAGCAAATTAACCATTGTCA GCTTTGGTTTTGGAATTGAATGTGCAGACTGCTCACCAGCCCTTGAAAGAAATTAACCCA GAAAAGCATTCACTGACAAAGAAGATATTTCATAGTAGAAAAATATTCAAACCTGGATGA TAATGTATCATTCTGATGACTATTTCTGTGGAATTCGTATACATTCCCTCCTTGGTGACT GTGTTAAAATTAACTGAGTCAGTTGTGACACACAGTATAGCCTCAGCACTTTAGAAGGGG AAGTGGGAGGATCATTTGAGCCCAGAATTTGAGATCACACTGAGCAACACCCCACCTCAG AACAGCATCCATTCTTGTTCTTCACTCCTGACAGGAGGCTTACATGAAACCTTGTTTAAT AAATGGTTTGATGTATTTGTTTAAGTATTTCTGACTATGCTAAATATTCTATACCTCTAA TTTATCTTTTTAAACTCAAGTACAAATTAACTTTGAGTTCTGTATGTACAGATGTAAGTT TCTGATGTAATTTCTGAAGACAAAATAGAACTTTCTAATAAATGGTTCATAATATTTGTG TTTATTCCTGATTAAATACTCTTTACCTTC
|
|
|
3' upstream sequence
|
|
|
|
|
|
ATTTTGTCTTTTATTTAAAAAAGAAAAAGATAAGTTACAACTTAATTTTGAGCTATATAC
TTATATTTTGAAGACAAATTGCCCAAAATGTGGGATATTCAGACCAACACCTAAGATTTC
TGTGAGGACCAGGGAAGAAAGACAGTCCAGTGTGTTCTTGACCTTAGCCTCATCTATTAT
GGAGTTGGGCCTGTCCCAAAAGTCCAATTAGACATGCGGGTATGAAAAATACTAATTATC
TAAAAGACCACTTAGAGTCAGGAGTCAGATCCTAAGCCTAAGATAAGAGTGCAGGTTTGA
TATTTCACTAAATCTAGCCAAGATTTAACACAGACAGGCCTCCTATTAAAATGGACAGTA
TAAAAGGGTGTTAGTCCTAAGAGTCTTACTGAGCTATGATGTGCATCTTAGTCAGTGTTG
TATTTATTCCTTGAGTACAGAAATCTATTGTGATCTGTTCTTGTGTTGTTAGCCATTATT
TCTTACTTCCTATGTCACACAGATGCTTGACGCCTATGGGGGGTTGTTGCTTTTAGTAAA
ATAATATACAGGAACTGGAGAGATGAAATCATTTGGACAAGTTAAAATAGACTACAAAGA
ACTAAGCAGTTGGAAGACCTGTTGTAGATTTCTGTTTCATGGATTTCAGACTTAGAGATT
AAAAGCTATGTGGAAAGATACTTAAACCATATGTCATCATTTCTTAGCAAATGATCCTAG
TAAAAGCCACAACTTTGCTCACGTACACTTCATTTGGTTAGGATTTCCTATTCTATAGTC
ATTGGCGTGCATTAGCTGGAGATAGAGGTTCTGCTTGGATGCCTGGCCCACTCACTGTCT
ATCCAAGGGCTTCTTTAAAGTGTGGCAATTAGAAGCCAAGGGCAAGTGTTCCCAGAAGCA
GGAAACATGCTTCCAGTCTCTGGAAGTCTGGGCCAAAAATAAACTCAGCCACTGGTTCCA
TTTTCTATAGGTTAAAACAGTGGGAAGAACCAAAGAGCTT..........
|