MoG+ -Mouse Genome database with high added value-

Target CDS Information

Gene Symbol (Gene ID)

Slc35b3 (ENSMUSG00000021432)

Cross Reference

CCDS	CCDS49240.1
EMBL	AC125223
GO	GO:0002230, GO:0005739, GO:0005794, ...show all
goslim_goa	GO:0005575, GO:0005622, GO:0005623, ...show all
MGI_trans_name	Slc35b3-201
RefSeq_mRNA	NM_001170431.1
RefSeq_peptide	NP_001163902
UCSC	uc011yyn.1
UniParc	UPI0000F4A899
Uniprot/SPTREMBL	F8WGD7

Definition

protein_id:ENSMUSP00000021870
translation:

MDRTLAQSTQEQGGEAQPAEERQDEASEKSRDQVAGLDCGRAETMDLKFNNSRKYVSISV
PSKTQAMSPHIKSVEDVVVLGVNLSKFSKLTQFLICVAGVFVFYLIYGYLQELIFSVEGF
KPYGWYLTLVQFAFYSVFGLIELQLTQDRRRRIPGKTYMLIAFLTVGTMGLSNTSLGYLN
YPTQVIFKCCKLIPVMLGGVFIQGKRYNLADVSAAVCMSLGLIWFTLADSTIAPNFNLTG
VMLISLALCADAVIGNVQEKAMKLHNASNSEMVLYSYSIGFVYILLGLSCTSGLGPAVAF
CSKNPVGTYGYAFLFSLTGYFGISFVLALIKIFGALLAVTVTTGRKAMTVVLSFLFFAKP
FTFQYIWSGLLVVLGIFLNVYSKNMDKIRLPSVYNMIKKAMDMKKSRTLAQTV

Chromosome

Length
Position(start - end)

27,890
38,932,766 - 38,960,657

Orient to Chromosome

minus

Link

Location : (13:38932766-38960657)
/

Detail Map

name	Slc35b3 (ENSMUSG00000021432)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : Slc35b3 note : solute carrier family 35, member B3 [Source:MGI Symbol;Acc:MGI:1913978]

name	Gm26514 (ENSMUSG00000097151)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : Gm26514 note : predicted gene, 26514 [Source:MGI Symbol;Acc:MGI:5477008]

name	5033403F01Rik (ENSMUSG00000096932)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : 5033403F01Rik note : RIKEN cDNA 5033403F01 gene [Source:MGI Symbol;Acc:MGI:1923208]

name	Slc35b3 (ENSMUSG00000021432)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000021870

name	Slc35b3 (ENSMUSG00000021432)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000167513

name	Slc35b3 (ENSMUSG00000021432) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS49240.1 RefSeq_peptide:NP_001163902 RefSeq_mRNA:NM_001170431.1 Uniprot/SPTREMBL:F8WGD7 UCSC:uc011yyn.1 EMBL:AC125223 GO:GO:0002230 GO:GO:0005739 GO:GO:0005794 GO:GO:0016021 GO:GO:0043231 GO:GO:0055085 GO:GO:0098779 MGI_trans_name:Slc35b3-201 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005737 goslim_goa:GO:0005739 goslim_goa:GO:0006810 goslim_goa:GO:0008150 goslim_goa:GO:0043226 goslim_goa:GO:0055085 UniParc:UPI0000F4A899
definition	note : transcript_id=ENSMUST00000021870 protein_id : ENSMUSP00000021870 translation : MDRTLAQSTQEQGGEAQPAEERQDEASEKSRDQVAGLDCGRAETMDLKFNNSRKYVSISVPSKTQAMSPHIKSVEDVVVLGVNLSKFSKLTQFLICVAGVFVFYLIYGYLQELIFSVEGFKPYGWYLTLVQFAFYSVFGLIELQLTQDRRRRIPGKTYMLIAFLTVGTMGLSNTSLGYLNYPTQVIFKCCKLIPVMLGGVFIQGKRYNLADVSAAVCMSLGLIWFTLADSTIAPNFNLTGVMLISLALCADAVIGNVQEKAMKLHNASNSEMVLYSYSIGFVYILLGLSCTSGLGPAVAFCSKNPVGTYGYAFLFSLTGYFGISFVLALIKIFGALLAVTVTTGRKAMTVVLSFLFFAKPFTFQYIWSGLLVVLGIFLNVYSKNMDKIRLPSVYNMIKKAMDMKKSRTLAQTV

name	Slc35b3 (ENSMUSG00000021432) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS26466.1 Uniprot/SWISSPROT:Q922Q5 RefSeq_peptide:NP_001163901 RefSeq_peptide:NP_598821 RefSeq_mRNA:NM_001170430.1 RefSeq_mRNA:NM_134060.4 UCSC:uc007qdy.2 Fantom:4921526O06 Fantom:4933431G15 Fantom:C430018J17 EMBL:AK076592 EMBL:AK077208 EMBL:AK141280 EMBL:BC006881 GO:GO:0000139 GO:GO:0002230 GO:GO:0005739 GO:GO:0005794 GO:GO:0016021 GO:GO:0043231 GO:GO:0055085 GO:GO:0098779 MGI_trans_name:Slc35b3-202 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005737 goslim_goa:GO:0005739 goslim_goa:GO:0005794 goslim_goa:GO:0006810 goslim_goa:GO:0006950 goslim_goa:GO:0008150 goslim_goa:GO:0043226 goslim_goa:GO:0055085 protein_id:AAH06881.1 protein_id:BAC36405.1 protein_id:BAC36684.1 protein_id:BAE24633.1 Reactome:R-MMU-1430728 Reactome:R-MMU-156580 Reactome:R-MMU-156584 Reactome:R-MMU-1630316 Reactome:R-MMU-174362 Reactome:R-MMU-211859 Reactome:R-MMU-382551 Reactome:R-MMU-425397 Reactome:R-MMU-425407 Reactome:R-MMU-71387 Reactome:R-MMU-727802 UniParc:UPI0000021BE4
definition	note : transcript_id=ENSMUST00000167513 protein_id : ENSMUSP00000126016 translation : MDLKFNNSRKYVSISVPSKTQAMSPHIKSVEDVVVLGVNLSKFSKLTQFLICVAGVFVFYLIYGYLQELIFSVEGFKPYGWYLTLVQFAFYSVFGLIELQLTQDRRRRIPGKTYMLIAFLTVGTMGLSNTSLGYLNYPTQVIFKCCKLIPVMLGGVFIQGKRYNLADVSAAVCMSLGLIWFTLADSTIAPNFNLTGVMLISLALCADAVIGNVQEKAMKLHNASNSEMVLYSYSIGFVYILLGLSCTSGLGPAVAFCSKNPVGTYGYAFLFSLTGYFGISFVLALIKIFGALLAVTVTTGRKAMTVVLSFLFFAKPFTFQYIWSGLLVVLGIFLNVYSKNMDKIRLPSVYNMIKKAMDMKKSRTLAQTV

name
type	STS
link
xref	UniSTS_NUM:164521 UniSTS:AI428480 WI_MRC-RH:426808
definition	note : map_weight=1 standard_name : AI428480

name
type	misc_feature
link
xref
definition	note : contig AC125223.3 1..214863(-1)

name	Gm26514 (ENSMUSG00000097151)
type	misc_RNA
link	VEGA Ensembl MGI
xref	MGI_trans_name:Gm26514-201
definition	note : lincRNA note : transcript_id=ENSMUST00000181087

name	5033403F01Rik (ENSMUSG00000096932)
type	misc_RNA
link	VEGA Ensembl MGI
xref	RefSeq_ncRNA:NR_131019 UCSC:uc056ytl.1 MGI_trans_name:5033403F01Rik-201
definition	note : lincRNA note : transcript_id=ENSMUST00000181376

Polymorphisms Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Slc35b3 (ENSMUSG00000021432)
Transcript ID	ENSMUST00000021870

Reports
substitution
cSNPs	6
Insertion	29
Deletion	33
SNPs	+1kb 38961190(c.-533A>G), 38961211(c.-554C>G), 38961217(c.-560T>A), 38961279(c.-622T>A), 38961283(c.-626A>C), 38961328(c.-671A>G), 38961370(c.-713A>T), 38961396(c.-739G>A), 38961401(c.-744T>C), 38961440(c.-783A>G), 38961484(c.-827G>A), 38961491(c.-834C>T), 38961516(c.-859A>G), 38961517(c.-860C>T), 38961528(c.-871G>T), 38961668(c.-1011A>G), 38961744(c.-1087A>T), 38961754(c.-1097G>A), 38961762(c.-1105A>T), 38961815(c.-1158C>A), 38961826(c.-1169C>G), 38961876(c.-1219C>G), 38961886(c.-1229T>C), 38961924(c.-1267A>G), 38961950(c.-1293G>A), 38961982(c.-1325C>G), 38961987(c.-1330G>A), 38962059(c.-1402T>C), 38962092(c.-1435A>C), 38962129(c.-1472C>T), 38962180(c.-1523T>G), 38962190(c.-1533A>G), 38962257(c.-1600T>A), 38962281(c.-1624C>A), 38962296(c.-1639T>C), 38962317(c.-1660T>C), 38962408(c.-1751C>T), 38962410(c.-1753G>T), 38962443(c.-1786C>G), 38962491(c.-1834A>C), 38962512(c.-1855C>T), 38962520(c.-1863T>C), 38962525(c.-1868T>A), 38962563(c.-1906G>A), 38962565(c.-1908T>A), 38962585(c.-1928A>G), 38962594(c.-1937T>A), 38962607(c.-1950G>T), 38962610(c.-1953C>T), 38962633(c.-1976A>G), 38962742(c.-2085T>A), 38962805(c.-2148T>C), 38962809(c.-2152C>A), 38962994(c.-2337T>C), 38963009(c.-2352A>G), 38963098(c.-2441A>C), 38963143(c.-2486G>T), 38963199(c.-2542A>G), 38963243(c.-2586G>A), 38963244(c.-2587G>A), 38963655(c.-2998G>C), 38963711(c.-3054T>G), 38963812(c.-3155C>A), 38963840(c.-3183G>A), 38963890(c.-3233T>C), 38964051(c.-3394A>G), 38964128(c.-3471T>C), 38964166(c.-3509A>G), 38964169(c.-3512T>C), 38964174(c.-3517T>C), 38964245(c.-3588T>C), 38964275(c.-3618T>G), 38964291(c.-3634G>A), 38964376(c.-3719A>C), 38964380(c.-3723A>G), 38964396(c.-3739T>C), 38964408(c.-3751G>A), 38964446(c.-3789A>G), 38964456(c.-3799A>G), 38964469(c.-3812A>C), 38964521(c.-3864C>G), 38964727(c.-4070A>G), 38964763(c.-4106C>G), 38965061(c.-4404C>G), 38965088(c.-4431A>G), 38965134(c.-4477C>G), 38965150(c.-4493A>G), 38965200(c.-4543G>A), 38965246(c.-4589G>A), 38965449(c.-4792G>A), 38965760(c.-5103C>G), 38965769(c.-5112T>G), 38965776(c.-5119C>G), 38965782(c.-5125G>A), 38965811(c.-5154A>G), 38965836(c.-5179A>G), 5'UTR 38960735(c.-78C>T), CDS 38932832(c.1176G>T), 38932889(c.1119C>T), 38943087(c.690C>T), 38955753(c.229G>A), 38955805(c.177A>T), 38960625(c.33G>A), 3'UTR 38932200(c.566C>T), 38932254(c.512G>A), 38932615(c.151A>C), 38932639(c.127A>G), 38932642(c.124T>C), 38932644(c.122C>T), 38932759(c.7T>C), INTRON 38933044(c.1092-128G>A), 38933070(c.1092-154C>T), 38933096(c.1092-180T>C), 38933135(c.1092-219G>C), 38933196(c.1092-280C>T), 38933199(c.1092-283G>T), 38933218(c.1092-302G>C), 38933270(c.1092-354T>A), 38933475(c.1092-559A>G), 38933544(c.1092-628C>T), 38933811(c.1092-895T>G), 38934040(c.1091+698T>A), 38935158(c.1022-351T>C), 38935333(c.1022-526C>G), 38935408(c.1022-601C>G), 38935418(c.1022-611G>C), 38935562(c.1022-755A>T), 38935574(c.1022-767G>A), 38935585(c.1022-778T>A), 38935678(c.1022-871A>G), 38935914(c.1022-1107G>A), 38935918(c.1022-1111A>T), 38935926(c.1022-1119T>C), 38935927(c.1022-1120A>G), 38936329(c.1021+913C>A), 38936836(c.1021+406A>G), 38936982(c.1021+260G>A), 38937481(c.910-128A>G), 38937721(c.909+26A>C), 38938315(c.817-476T>C), 38938459(c.817-620C>T), 38938552(c.817-713G>A), 38938559(c.817-720T>C), 38938689(c.817-850T>C), 38938769(c.817-930T>A), 38938771(c.817-932T>A), 38938794(c.817-955G>T), 38938921(c.816+954C>T), 38939183(c.816+692A>G), 38939664(c.816+211C>T), 38940049(c.719-77T>G), 38940105(c.719-133A>T), 38940106(c.719-134G>T), 38940321(c.719-349G>T), 38940388(c.719-416C>T), 38940610(c.719-638T>C), 38940614(c.719-642A>G), 38940623(c.719-651T>C), 38940674(c.719-702C>T), 38940675(c.719-703G>A), 38940681(c.719-709T>C), 38940727(c.719-755T>C), 38941122(c.719-1150A>G), 38941137(c.719-1165G>A), 38941139(c.719-1167A>G), 38941156(c.719-1184G>A), 38941262(c.719-1290A>G), 38941372(c.719-1400T>C), 38941418(c.719-1446T>C), 38941437(c.719-1465T>A), 38941464(c.719-1492C>A), 38941474(c.719-1502A>G), 38941478(c.719-1506A>G), 38941511(c.719-1539A>G), 38941746(c.718+1313C>T), 38941832(c.718+1227T>A), 38941911(c.718+1148A>G), 38941925(c.718+1134G>A), 38942202(c.718+857C>T), 38942380(c.718+679G>A), 38942383(c.718+676T>C), 38942436(c.718+623T>C), 38942581(c.718+478C>T), 38942590(c.718+469C>T), 38942649(c.718+410G>A), 38942655(c.718+404G>A), 38942782(c.718+277T>C), 38942816(c.718+243T>C), 38942842(c.718+217C>T), 38942884(c.718+175G>C), 38942887(c.718+172G>T), 38942888(c.718+171T>C), 38943203(c.611-37T>A), 38943205(c.611-39A>G), 38943226(c.611-60T>A), 38943439(c.611-273A>C), 38943488(c.611-322T>C), 38943671(c.611-505A>T), 38943797(c.611-631A>C), 38944809(c.456-155G>A), 38944891(c.456-237C>T), 38945130(c.456-476A>G), 38945226(c.456-572A>G), 38945895(c.456-1241C>T), 38945917(c.456-1263T>C), 38945963(c.456-1309G>A), 38946185(c.456-1531T>G), 38946444(c.456-1790T>A), 38946672(c.456-2018G>A), 38946673(c.456-2019G>A), 38946714(c.456-2060T>C), 38946842(c.456-2188C>T), 38946881(c.456-2227G>T), 38946883(c.456-2229A>G), 38946976(c.456-2322A>G), 38946993(c.456-2339C>G), 38947051(c.456-2397G>T), 38947122(c.456-2468A>G), 38947123(c.456-2469C>T), 38947299(c.456-2645G>C), 38947446(c.456-2792C>T), 38947727(c.456-3073A>T), 38947738(c.456-3084T>A), 38947744(c.456-3090C>A), 38947770(c.456-3116A>G), 38947809(c.456-3155G>A), 38948035(c.456-3381T>C), 38948085(c.456-3431A>G), 38948154(c.456-3500T>C), 38948272(c.456-3618C>A), 38948299(c.456-3645G>A), 38948503(c.456-3849T>G), 38948513(c.456-3859G>A), 38948531(c.456-3877T>C), 38948695(c.456-4041T>A), 38948696(c.456-4042T>A), 38948824(c.456-4170G>A), 38949011(c.456-4357C>T), 38949119(c.456-4465C>A), 38949167(c.456-4513A>T), 38949220(c.456-4566G>A), 38949330(c.456-4676C>G), 38949334(c.456-4680A>C), 38949346(c.456-4692C>T), 38949403(c.455+4706G>A), 38949419(c.455+4690G>A), 38949536(c.455+4573C>T), 38949719(c.455+4390T>C), 38949987(c.455+4122A>G), 38950055(c.455+4054G>C), 38950083(c.455+4026A>G), 38950118(c.455+3991G>A), 38950205(c.455+3904T>G), 38950290(c.455+3819C>G), 38950436(c.455+3673T>C), 38950440(c.455+3669T>C), 38950529(c.455+3580G>T), 38950588(c.455+3521A>G), 38950714(c.455+3395T>C), 38950966(c.455+3143T>C), 38950987(c.455+3122G>A), 38951417(c.455+2692A>T), 38951472(c.455+2637C>T), 38951547(c.455+2562G>A), 38951604(c.455+2505T>C), 38951720(c.455+2389G>C), 38951863(c.455+2246G>A), 38951920(c.455+2189G>A), 38951956(c.455+2153T>C), 38951988(c.455+2121T>C), 38953072(c.455+1037C>T), 38953116(c.455+993C>T), 38953719(c.455+390A>C), 38953886(c.455+223T>C), 38954247(c.334-17T>C), 38954802(c.334-572T>A), 38954880(c.334-650G>T), 38955023(c.333+626G>A), 38955130(c.333+519C>G), 38955338(c.333+311T>C), 38955540(c.333+109T>G), 38956130(c.46-194G>A), 38956436(c.46-500T>A), 38956446(c.46-510T>C), 38956529(c.46-593T>C), 38956639(c.46-703T>C), 38956895(c.46-959G>A), 38956947(c.46-1011A>T), 38957162(c.46-1226A>G), 38957287(c.46-1351A>T), 38957552(c.46-1616C>T), 38957612(c.46-1676T>C), 38957792(c.46-1856T>C), 38958014(c.46-2078T>C), 38958100(c.46-2164T>C), 38959666(c.45+947G>C), 38959695(c.45+918T>A), 38959811(c.45+802C>T), 38960255(c.45+358G>C), 38960562(c.45+51G>A), -1kb 38927216(c.5550A>G), 38927278(c.5488T>C), 38927314(c.5452G>A), 38927320(c.5446A>T), 38927430(c.5336A>T), 38927841(c.4925C>T), 38927848(c.4918C>T), 38927879(c.4887G>A), 38927896(c.4870G>A), 38927918(c.4848G>C), 38928112(c.4654T>G), 38928169(c.4597G>A), 38928173(c.4593T>C), 38928241(c.4525A>G), 38928269(c.4497T>C), 38928282(c.4484G>A), 38928329(c.4437G>A), 38928427(c.4339A>T), 38928461(c.4305C>T), 38928625(c.4141G>A), 38928685(c.4081C>T), 38928688(c.4078G>A), 38928838(c.3928A>G), 38928946(c.3820C>G), 38929136(c.3630T>G), 38929166(c.3600A>G), 38929239(c.3527G>T), 38929306(c.3460T>C), 38929488(c.3278T>C), 38929658(c.3108A>G), 38929712(c.3054G>A), 38929909(c.2857G>A), 38929927(c.2839C>T), 38930006(c.2760T>C), 38930034(c.2732C>T), 38930301(c.2465C>A), 38930334(c.2432T>G), 38930428(c.2338C>G), 38930621(c.2145C>T), 38930647(c.2119C>T), 38930792(c.1974A>G), 38931172(c.1594T>C), 38931390(c.1376T>A), 38931392(c.1374G>A), 38931417(c.1349G>T), 38931471(c.1295T>C), 38932025(c.741C>T),
Insertions	+1kb 38961745 (c.-1089_-1088insG), 38963339 (c.-2683_-2682insGCAAT), 38965273 (c.-4617_-4616insTAA), 38965349 (c.-4693_-4692insGTGTGG), 5'UTR CDS 3'UTR 38932173 (c.592_593insTA), 38932307 (c.458_459insCT), INTRON 38933454 (c.1092-539_1092-538insGGG), 38935752 (c.1022-946_1022-945insGTTC), 38941503 (c.719-1532dupG), 38942627 (c.718+430_718+431dupTT), 38942631 (c.718+427_718+428insTT), 38942872 (c.718+186_718+187insTT), 38943798 (c.611-633dupT), 38945506 (c.456-853_456-852insT), 38947824 (c.456-3171dupA), 38948693 (c.456-4040_456-4039insG), 38949362 (c.456-4710_456-4709dupTC), 38950749 (c.455+3356_455+3359dupTGTT), 38952076 (c.455+2031_455+2032dupCC), 38954705 (c.334-476dupA), 38956547 (c.46-612_46-611insCAAAA), 38956776 (c.46-841dupT), 38959383 (c.45+1229_45+1230insTCGAG), -1kb 38928297 (c.4468_4469insAA), 38928470 (c.4295_4296insT), 38928648 (c.4117_4118insGTAG), 38928721 (c.4044_4045insG), 38929225 (c.3540_3541insA), 38929667 (c.3098_3099insCCTC),
Deletions	+1kb 38961025 (c.-373_-369delCAAAT), 38962153 (c.-1498_-1497delTT), 38962185 (c.-1529delA), 38962194 (c.-1538delT), 38962626 (c.-1970delC), 38962868 (c.-2213_-2212delAT), 38965461 (c.-4806_-4805delGT), 38965468 (c.-4815_-4812delCACA), 38965631 (c.-4975delG), 5'UTR CDS 3'UTR INTRON 38934562 (c.1091+175delT), 38935382 (c.1022-578_1022-576delGCG), 38939385 (c.816+489delA), 38942610 (c.718+444_718+448delAGATA), 38944087 (c.610+410_610+412delGCT), 38945019 (c.456-367_456-366delGG), 38945276 (c.456-623delA), 38946831 (c.456-2178delG), 38946877 (c.456-2224delG), 38946911 (c.456-2258delG), 38951737 (c.455+2370_455+2371delAT), 38956393 (c.46-461_46-458delTTCA), 38957174 (c.46-1240_46-1239delTC), 38958469 (c.45+2137_45+2143delTTCTGAT), 38958492 (c.45+2120delC), -1kb 38927920 (c.4840_4845delTTGGGG), 38927936 (c.4828_4829delGG), 38928037 (c.4725_4728delGGGA), 38928054 (c.4708_4711delAGGG), 38928527 (c.4233_4238delCTCACC), 38929349 (c.3415_3416delAA), 38930222 (c.2543delG), 38931217 (c.1543_1548delGTGTGT), 38931262 (c.1500_*1503delTGTG),
coding sequence substitutions
premature termination by the nucleotide substitution	0
synonymous num	5
non-synonymous num	1
synonymous substitutions	38932832 (p.Ser392Ser), 38932889 (p.Val373Val), 38943087 (p.Ser230Ser), 38955805 (p.Ser59Ser), 38960625 (p.Glu11Glu),
non-synonymous substitutions	38955753 (p.Val77Ile),
B6 transcript (ENSMUST00000021870)	MDRTLAQSTQEQGGEAQPAEERQDEASEKSRDQVAGLDCGRAETMDLKFNNSRKYVSISV PSKTQAMSPHIKSVEDVVVLGVNLSKFSKLTQFLICVAGVFVFYLIYGYLQELIFSVEGF KPYGWYLTLVQFAFYSVFGLIELQLTQDRRRRIPGKTYMLIAFLTVGTMGLSNTSLGYLN YPTQVIFKCCKLIPVMLGGVFIQGKRYNLADVSAAVCMSLGLIWFTLADSTIAPNFNLTG VMLISLALCADAVIGNVQEKAMKLHNASNSEMVLYSYSIGFVYILLGLSCTSGLGPAVAF CSKNPVGTYGYAFLFSLTGYFGISFVLALIKIFGALLAVTVTTGRKAMTVVLSFLFFAKP FTFQYIWSGLLVVLGIFLNVYSKNMDKIRLPSVYNMIKKAMDMKKSRTLAQTV*
MSMv4 transcript	MDRTLAQSTQEQGGEAQPAEERQDEASEKSRDQVAGLDCGRAETMDLKFNNSRKYVSISV PSKTQAMSPHIKSVEDIVVLGVNLSKFSKLTQFLICVAGVFVFYLIYGYLQELIFSVEGF KPYGWYLTLVQFAFYSVFGLIELQLTQDRRRRIPGKTYMLIAFLTVGTMGLSNTSLGYLN YPTQVIFKCCKLIPVMLGGVFIQGKRYNLADVSAAVCMSLGLIWFTLADSTIAPNFNLTG VMLISLALCADAVIGNVQEKAMKLHNASNSEMVLYSYSIGFVYILLGLSCTSGLGPAVAF CSKNPVGTYGYAFLFSLTGYFGISFVLALIKIFGALLAVTVTTGRKAMTVVLSFLFFAKP FTFQYIWSGLLVVLGIFLNVYSKNMDKIRLPSVYNMIKKAMDMKKSRTLAQTV*
homology	99.76 (414 / 414)

Exon Detail Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Slc35b3 (ENSMUSG00000021432)
Transcript ID	ENSMUST00000021870


..........GGGGGTTAGATGAATTCTAAAGTGTTGTTTGGATATGACCCATCAAGAAG
AAGTTGCAAAACACGGAGAGGGTTTTAGGTTTCAATGAGATGGTAAAAGCCATTAAAGCA
TTGTGAGCAAAGCAGCATCAAATCCTGCTCTTGGGCAGAATTAGGCTGTAAGGAAGTAAA
AGATAATAGAAGCCAGCTAGGCTATTGTGATTGCCTAGGCAAGAGTGGGTGGACCTTAAC
CCCTCTTGTATTCCAGATTTATATTACCATTTACCTTCTCACCTATGTCCTATAACTCCT
TAAGGGCTGGAAGTCCATATAAGCTACTTATAAATTATGCATATGACCCTACACATATGC
ACATTCAATGGGTGTTTGATAAATAATGTTCCTTTTTGGCTAACAGTTGTTTTACTGCTA
CTATTTGCTATTGTTGAGCCATAGAGTGACATCTCTAAATGTCTAAATGGGCTTTGTTAT
TCTCCTTAGAATTTTTTCTTTCCTCCCCTTTTTTTTAAGTTTCAACTTTCATACAAAACT
GGCTTAGCAAGGCTGGTGTTTTTAAAATGTCTAGCTGGACCTTTTCCCTCACCACTTCAG
AGCTTCACTCCTAAGGCATAAATGCTTCCCAATGCCTAATTCTTGTGAAATTTTAAAACT
TACACACAACTGACGGGATTGTAACGTTTCTGTTGGCACTATTCACCCCTTTTCAAAGCA
GACTCTTGAATACTATTCCGGTTAAGGTAATCGTAATAATCCTTATCGCCAAGCCCATCT
TGGCATTTTCTTCATTGTATCTCAGTAACTGTAAGTGTAGCTCTCAATGTGGAATAATTT
ATGATATTTGGCGATCAAATATCAGAGATTTTATAACATTTGTCAGACTCCAAGCCAGGG
ATTTACATTTCAAGCAGTGAGTGGCATGTCAACACAATCCTGGTTCATTTCTGGCCAATT
ACAAACCATCATCACTGTAAGGGCATGTGACGCAGGCTTCCTGTTTCTTC
AGTCCACCTTGGCCAGAAGGGTAGGAGTGAGTCCGGAGAACTGGGACAGGAAAGTAGTTGAGAAGCAACTTCATCCCTTTGAATCAAAAGGTGGAGGCTGGGGAAAGGGAACCTCAGGCTGCTGAGATCCGGCTCGAGCATTCTAAACCTTGGCATCCTTCACACGCCCCGGCTCACGATCGCGGATGTGAAGTCAACTGGGTCGCAGAAGCCACGAGATGGACAGGACCCTTGCTCAGAGCACGCAGGAACAGGGTGGAGAG
GTAGAAACAGCCGAGGGGGTGGGGA..........CCATAACTGCTATCCCCTTCTCTAG
GCCCAGCCAGCAGAAGAAAGACAGGACGAAGCATCCGAAAAGAGCAGAGACCAAGTTGCAGGCCTTGACTGTGGCAGAGCAGAAACAATGGACCTCAAGTTCAACAACTCCAGGAAGTATGTCTCCATCTCTGTGCCCTCCAAAACGCAGGCCATGTCGCCGCACATCAAGTCAGTTGAGGACATCGTGGTGCTGGGCGTGAACCTCAGCAAGTTTAGCAAGCTCACACAGTTTCTCATCTGTGTGGCTGGAGTTTTTGTATTTTACCTAATTTATGGATACTTACAG
GTAAAAAGTAGTCATTTGTCAATGA..........CTAACAAACGCATTGTCTTCAACAG
GAGCTGATCTTTTCAGTGGAAGGCTTTAAGCCTTACGGCTGGTACCTTACCTTAGTGCAGTTTGCCTTTTACTCCGTATTTGGCCTAATCGAGCTACAGCTCACTCAGGACAGAAGGAGAAG
GTATGTGGTGGGCTTGGCACTCTGG..........AGGTTTTAAAAATTGTCTCTTCCAG
AATACCAGGAAAAACCTACATGCTAATAGCTTTTCTAACTGTGGGTACTATGGGCTTATCAAACACTTCCTTGGGCTACCTGAATTACCCAACCCAAGTCATCTTCAAGTGCTGCAAACTGATTCCTGTTATGCTAGGAGGAGTTTTTATTCAAG
GTACAGTAATACTGCTTTTATACTG..........GCCATCTTCCTCTTGTCTCACATAG
GAAAGCGGTACAACCTTGCAGATGTGTCTGCCGCAGTGTGCATGAGCCTGGGCCTGATCTGGTTTACCCTCGCTGACAGTACAATTGCACCAAACTTTAATCTGACAG
GTGAGGAATGGATTTGTATCCCTAA..........AGGATCACTCTCTTATTCCTTGAAG
GTGTGATGCTTATCTCCCTGGCGCTGTGTGCAGACGCTGTCATTGGGAACGTTCAGGAGAAGGCCATGAAACTGCACAATGCTTCCAACTCGGAGATG
GTGAGGACCCCAGCACTTCCTCGAG..........ATTTTACTGCTTGTGCCTCTGCCAG
GTTTTGTATTCCTACTCAATCGGGTTTGTGTACATTTTGCTGGGACTGTCATGCACTAGTGGACTGGGCCCTGCAGTGGCATTTTGTTCAAAG
GTAAGCACTCCTTGCATTTTAAAAA..........TAACAGGCCGTCTTACTCCTTGCAG
AACCCTGTTGGGACTTACGGCTACGCCTTCCTGTTTTCCCTCACTGGATACTTTGGGATCTCCTTTGTTCTGGCCCTCATTAAAATCTTCGGTGCACTTCTGGCTGTAACAG
GTAGGAGCCTGGCTTAGACTGTGAA..........ATGCATCTAACTCTTTTCCCTACAG
TGACAACAGGAAGGAAAGCAATGACCGTTGTCCTGTCCTTCCTGTTCTTTGCTAAGCCGTTCACTTTTCA
GTAAGTACTTATGTATCAGGGTTTC..........ATCCACTTTCTCATTTCTTTTTTAG
GTATATATGGTCTGGCTTGTTAGTTGTTCTTGGCATATTTCTCAATGTTTACAGCAAAAATATGGATAAAATAAGATTGCCATCTGTGTACAACATGATAAAGAAAGCCATGGACATGAAAAAGTCAAGGACGTTGGCACAGACTGTGTAGGAACTGCGTTCTCCTATTTAAAATAAAGCTCTGTGGGAACAACCATTAATCAATTCACTTTGCAAAGGCTTGTGATACAAACCAAAGGATCTGAAGGCCGCTGTCAGATGAGCAGATTGTATACCCGGTGGTTCCTTGGCATCCACCTCTCCAGAATACAGGCTTTTGATCAACTCCAAATGATCAAGAGCCCACACCTAGGACGTGTTGCAATAAAGTCAGTATGAAGGAAAGTGCTTCCTAGCAATGTTCTGAACATTTCACTGGAAATGGACCGTGTTGTAAGACTGATTGGAAATCCTCCCAGCCTGCAGCGCGGTACTGTGAGTGGCACTGTGTCTCCATTCCGTTTTGCTGGTGTTATTTAAATTCTTCTCTGTTATAAGAGTGAACTGATGATTTGAAGTGTAGAGAAAATACCATTCATTTATAAATAAAATTATCCTGTGATTTTTTTTAAATGGTGTTTTAATAGAATTTGTTATGGCAGAGAATGGAGATGGGATGAAGGACTAATGTATACTTTAAAACTTGGGTTTTTAAAGTTTTGAGAAAATAACATTCATTTAAATAAAATTATCCTCTCATTTTTAAAAAAAATGTATTAATAAAATTTGTTATTGAAG
AAAATCAAGGTGGGAAGAACTTACGTACGCTTTAAAACTTGGGTTTTCACTCATAATGTA
AAAATACTGTGAAAGCATCCTCATCTCTCCACAGGATGAAGGGCTTCAGGGAAATGCCCT
GGGTTATACAATGCCACGGTGGTCAGCTTTACCCTGGGTTTTTTAATTGGAGGACTGAAG
TTAACATCTTAAGTTATATGAAATTATCCTTGCTCTTTGTATAAGGATGAAATTTTATTT
CAAGGTTGAGATGAAGTGGGATAGTTTAAGAAACACGGGTATATTTCTCAAACCTGAGCA
GCACTACTTCTCAGATGCTAATGAAATCTCACAGTCTAGCTGGGCAGTAGTGGCGCACGC
CTTTAATCCCAGAACTTGGGAGGCAGAGGCAGGCGGATCTCTGAGTTTGAGGCCAGCCTG
ATCTACAGAGTGAGTTCCAGGACTGAGACTATACAGAGAAACCCTATCCAAAGAGAGAGA
GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAATCTAGA
CAGCTTTCTTTCTAACAGTTCTGGATGCTAGGAACCCCACACTGAAGGTGCTAACAAACC
TGCAAGGGCGGCCTCCTGCTTTCTAGATGGCTTTTCTTGCTGTGTCCACAGGTATTGAGT
TCTAATCCCATTATGAGGACCCCACCCTCATAACTCAGCCTCCTAATGCTGCCTCTGGGA
AGTTGGGATTTTACAGGTGAATATGGGATACATAAACATAGCCTATTACTTCAGAACATA
ACCATACTACTTGGGTAGTTTTGAGTCTAAACTTCTGAGGTTTGGTGCCTTTCAGTAGGA
ATTTGTATAATTGCTGTATGCATCTGCTCACTCTGTGTGTGTGTGTGTGTGTGTGTGTGT
GTGTGTGTGTGTGTGTGTGTGTTACATTCACATATAGCTGAATGTGTGTATAAAAGCTGT
TACTCCTCATTTTCGCTATAATCAATATAATTAAATCCCT..........

No.	Exon / Intron	Start	End	Start Phase	End Phase	Length	Sequence
	5' upstream sequence						..........GGGGGTTAGATGAATTCTAAAGTGTTGTTTGGATATGACCCATCAAGAAG AAGTTGCAAAACACGGAGAGGGTTTTAGGTTTCAATGAGATGGTAAAAGCCATTAAAGCA TTGTGAGCAAAGCAGCATCAAATCCTGCTCTTGGGCAGAATTAGGCTGTAAGGAAGTAAA AGATAATAGAAGCCAGCTAGGCTATTGTGATTGCCTAGGCAAGAGTGGGTGGACCTTAAC CCCTCTTGTATTCCAGATTTATATTACCATTTACCTTCTCACCTATGTCCTATAACTCCT TAAGGGCTGGAAGTCCATATAAGCTACTTATAAATTATGCATATGACCCTACACATATGC ACATTCAATGGGTGTTTGATAAATAATGTTCCTTTTTGGCTAACAGTTGTTTTACTGCTA CTATTTGCTATTGTTGAGCCATAGAGTGACATCTCTAAATGTCTAAATGGGCTTTGTTAT TCTCCTTAGAATTTTTTCTTTCCTCCCCTTTTTTTTAAGTTTCAACTTTCATACAAAACT GGCTTAGCAAGGCTGGTGTTTTTAAAATGTCTAGCTGGACCTTTTCCCTCACCACTTCAG AGCTTCACTCCTAAGGCATAAATGCTTCCCAATGCCTAATTCTTGTGAAATTTTAAAACT TACACACAACTGACGGGATTGTAACGTTTCTGTTGGCACTATTCACCCCTTTTCAAAGCA GACTCTTGAATACTATTCCGGTTAAGGTAATCGTAATAATCCTTATCGCCAAGCCCATCT TGGCATTTTCTTCATTGTATCTCAGTAACTGTAAGTGTAGCTCTCAATGTGGAATAATTT ATGATATTTGGCGATCAAATATCAGAGATTTTATAACATTTGTCAGACTCCAAGCCAGGG ATTTACATTTCAAGCAGTGAGTGGCATGTCAACACAATCCTGGTTCATTTCTGGCCAATT ACAAACCATCATCACTGTAAGGGCATGTGACGCAGGCTTCCTGTTTCTTC
1	EXON 1	38,960,613	38,960,875	-	0	263	AGTCCACCTTGGCCAGAAGGGTAGGAGTGAGTCCGGAGAACTGGGACAGGAAAGTAGTTG AGAAGCAACTTCATCCCTTTGAATCAAAAGGTGGAGGCTGGGGAAAGGGAACCTCAGGCT GCTGAGATCCGGCTCGAGCATTCTAAACCTTGGCATCCTTCACACGCCCCGGCTCACGAT CGCGGATGTGAAGTCAACTGGGTCGCAGAAGCCACGAGATGGACAGGACCCTTGCTCAGA GCACGCAGGAACAGGGTGGAGAG
	INTRON 1 - 2	38,955,937	38,960,612			4,676	GTAGAAACAGCCGAGGGGGTGGGGA..........CCATAACTGCTATCCCCTTCTCTAG
2	EXON 2	38,955,649	38,955,936	0	0	288	GCCCAGCCAGCAGAAGAAAGACAGGACGAAGCATCCGAAAAGAGCAGAGACCAAGTTGCA GGCCTTGACTGTGGCAGAGCAGAAACAATGGACCTCAAGTTCAACAACTCCAGGAAGTAT GTCTCCATCTCTGTGCCCTCCAAAACGCAGGCCATGTCGCCGCACATCAAGTCAGTTGAG GACATCGTGGTGCTGGGCGTGAACCTCAGCAAGTTTAGCAAGCTCACACAGTTTCTCATC TGTGTGGCTGGAGTTTTTGTATTTTACCTAATTTATGGATACTTACAG
	INTRON 2 - 3	38,954,231	38,955,648			1,418	GTAAAAAGTAGTCATTTGTCAATGA..........CTAACAAACGCATTGTCTTCAACAG
3	EXON 3	38,954,109	38,954,230	0	2	122	GAGCTGATCTTTTCAGTGGAAGGCTTTAAGCCTTACGGCTGGTACCTTACCTTAGTGCAG TTTGCCTTTTACTCCGTATTTGGCCTAATCGAGCTACAGCTCACTCAGGACAGAAGGAGA AG
	INTRON 3 - 4	38,944,655	38,954,108			9,454	GTATGTGGTGGGCTTGGCACTCTGG..........AGGTTTTAAAAATTGTCTCTTCCAG
4	EXON 4	38,944,500	38,944,654	2	1	155	AATACCAGGAAAAACCTACATGCTAATAGCTTTTCTAACTGTGGGTACTATGGGCTTATC AAACACTTCCTTGGGCTACCTGAATTACCCAACCCAAGTCATCTTCAAGTGCTGCAAACT GATTCCTGTTATGCTAGGAGGAGTTTTTATTCAAG
	INTRON 4 - 5	38,943,167	38,944,499			1,333	GTACAGTAATACTGCTTTTATACTG..........GCCATCTTCCTCTTGTCTCACATAG
5	EXON 5	38,943,059	38,943,166	1	1	108	GAAAGCGGTACAACCTTGCAGATGTGTCTGCCGCAGTGTGCATGAGCCTGGGCCTGATCT GGTTTACCCTCGCTGACAGTACAATTGCACCAAACTTTAATCTGACAG
	INTRON 5 - 6	38,939,973	38,943,058			3,086	GTGAGGAATGGATTTGTATCCCTAA..........AGGATCACTCTCTTATTCCTTGAAG
6	EXON 6	38,939,875	38,939,972	1	0	98	GTGTGATGCTTATCTCCCTGGCGCTGTGTGCAGACGCTGTCATTGGGAACGTTCAGGAGA AGGCCATGAAACTGCACAATGCTTCCAACTCGGAGATG
	INTRON 6 - 7	38,937,840	38,939,874			2,035	GTGAGGACCCCAGCACTTCCTCGAG..........ATTTTACTGCTTGTGCCTCTGCCAG
7	EXON 7	38,937,747	38,937,839	0	0	93	GTTTTGTATTCCTACTCAATCGGGTTTGTGTACATTTTGCTGGGACTGTCATGCACTAGT GGACTGGGCCCTGCAGTGGCATTTTGTTCAAAG
	INTRON 7 - 8	38,937,354	38,937,746			393	GTAAGCACTCCTTGCATTTTAAAAA..........TAACAGGCCGTCTTACTCCTTGCAG
8	EXON 8	38,937,242	38,937,353	0	1	112	AACCCTGTTGGGACTTACGGCTACGCCTTCCTGTTTTCCCTCACTGGATACTTTGGGATC TCCTTTGTTCTGGCCCTCATTAAAATCTTCGGTGCACTTCTGGCTGTAACAG
	INTRON 8 - 9	38,934,808	38,937,241			2,434	GTAGGAGCCTGGCTTAGACTGTGAA..........ATGCATCTAACTCTTTTCCCTACAG
9	EXON 9	38,934,738	38,934,807	1	2	70	TGACAACAGGAAGGAAAGCAATGACCGTTGTCCTGTCCTTCCTGTTCTTTGCTAAGCCGT TCACTTTTCA
	INTRON 9 - 10	38,932,917	38,934,737			1,821	GTAAGTACTTATGTATCAGGGTTTC..........ATCCACTTTCTCATTTCTTTTTTAG
10	EXON 10	38,932,140	38,932,916	2	-	777	GTATATATGGTCTGGCTTGTTAGTTGTTCTTGGCATATTTCTCAATGTTTACAGCAAAAA TATGGATAAAATAAGATTGCCATCTGTGTACAACATGATAAAGAAAGCCATGGACATGAA AAAGTCAAGGACGTTGGCACAGACTGTGTAGGAACTGCGTTCTCCTATTTAAAATAAAGC TCTGTGGGAACAACCATTAATCAATTCACTTTGCAAAGGCTTGTGATACAAACCAAAGGA TCTGAAGGCCGCTGTCAGATGAGCAGATTGTATACCCGGTGGTTCCTTGGCATCCACCTC TCCAGAATACAGGCTTTTGATCAACTCCAAATGATCAAGAGCCCACACCTAGGACGTGTT GCAATAAAGTCAGTATGAAGGAAAGTGCTTCCTAGCAATGTTCTGAACATTTCACTGGAA ATGGACCGTGTTGTAAGACTGATTGGAAATCCTCCCAGCCTGCAGCGCGGTACTGTGAGT GGCACTGTGTCTCCATTCCGTTTTGCTGGTGTTATTTAAATTCTTCTCTGTTATAAGAGT GAACTGATGATTTGAAGTGTAGAGAAAATACCATTCATTTATAAATAAAATTATCCTGTG ATTTTTTTTAAATGGTGTTTTAATAGAATTTGTTATGGCAGAGAATGGAGATGGGATGAA GGACTAATGTATACTTTAAAACTTGGGTTTTTAAAGTTTTGAGAAAATAACATTCATTTA AATAAAATTATCCTCTCATTTTTAAAAAAAATGTATTAATAAAATTTGTTATTGAAG
	3' upstream sequence						AAAATCAAGGTGGGAAGAACTTACGTACGCTTTAAAACTTGGGTTTTCACTCATAATGTA AAAATACTGTGAAAGCATCCTCATCTCTCCACAGGATGAAGGGCTTCAGGGAAATGCCCT GGGTTATACAATGCCACGGTGGTCAGCTTTACCCTGGGTTTTTTAATTGGAGGACTGAAG TTAACATCTTAAGTTATATGAAATTATCCTTGCTCTTTGTATAAGGATGAAATTTTATTT CAAGGTTGAGATGAAGTGGGATAGTTTAAGAAACACGGGTATATTTCTCAAACCTGAGCA GCACTACTTCTCAGATGCTAATGAAATCTCACAGTCTAGCTGGGCAGTAGTGGCGCACGC CTTTAATCCCAGAACTTGGGAGGCAGAGGCAGGCGGATCTCTGAGTTTGAGGCCAGCCTG ATCTACAGAGTGAGTTCCAGGACTGAGACTATACAGAGAAACCCTATCCAAAGAGAGAGA GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAATCTAGA CAGCTTTCTTTCTAACAGTTCTGGATGCTAGGAACCCCACACTGAAGGTGCTAACAAACC TGCAAGGGCGGCCTCCTGCTTTCTAGATGGCTTTTCTTGCTGTGTCCACAGGTATTGAGT TCTAATCCCATTATGAGGACCCCACCCTCATAACTCAGCCTCCTAATGCTGCCTCTGGGA AGTTGGGATTTTACAGGTGAATATGGGATACATAAACATAGCCTATTACTTCAGAACATA ACCATACTACTTGGGTAGTTTTGAGTCTAAACTTCTGAGGTTTGGTGCCTTTCAGTAGGA ATTTGTATAATTGCTGTATGCATCTGCTCACTCTGTGTGTGTGTGTGTGTGTGTGTGTGT GTGTGTGTGTGTGTGTGTGTGTTACATTCACATATAGCTGAATGTGTGTATAAAAGCTGT TACTCCTCATTTTCGCTATAATCAATATAATTAAATCCCT..........

Sequence Detail Report

Gene Symbol (Gene ID)	Slc35b3 (ENSMUSG00000021432)
Transcript ID	ENSMUST00000021870

		SNP Information
Strain :
Sequence Retrieve :
Exon translate : CDS Start ( 1 ) - End ( 414 ) -
Strand :	forward reverse
Show sequence :	nucleotide amino acid
Color information