MoG+ -Mouse Genome database with high added value-

Target CDS Information

Gene Symbol (Gene ID)

Shc3 (ENSMUSG00000021448)

Cross Reference

CCDS	CCDS49265.1
EMBL	BC103612, BC105644, BC105645, ...show all
GO	GO:0005515, GO:0005622, GO:0005886, ...show all
goslim_goa	GO:0003674, GO:0005575, GO:0005622, ...show all
MGI_trans_name	Shc3-201
protein_id	AAC52508.1, AAI03613.1, AAI05645.1, ...show all
Reactome	R-MMU-112399, R-MMU-112412, R-MMU-1227986, ...show all
RefSeq_mRNA	NM_009167.3
RefSeq_peptide	NP_033193
UCSC	uc007qmg.1

UniParc	UPI0000021BF5
Uniprot/SWISSPROT	Q61120

Definition

protein_id:ENSMUSP00000021898
translation:

MSATRKSRAGDEPLPRPPRGAPHTSDQVLGPGVTYVVKYLGCIEVLRSMRSLDFSTRTQV
TREAISRVCEAVPGAKGALKKRKPPSKMLSSILGKSNLQFAGMSISLTISTASLNLRTPD
SKQIIANHHMRSISFASGGDPDTTDYVAYVAKDPVNRRACHILECCDGLAQDVIGSIGQA
FELRFKQYLQCPSKVPALQDRMQSLDEPWTEEEGDGPDHPYYNSVPTKMPPPGGFLDARL
KGRPHAPEAAQFAGKEQTYYQGRHLGDTFGEDWQRAPTRQGSLDIYSTAEGKTHMVPVGE
TPTYVNTQPVPPQVWPAATSSTESSPRKDLFDMKPFEDALRNQPLGPMLSKAASVECISP
VTPRAPDARMLEELNAEPWYQGEMSRKEAEALLREDGDFLVRKSTTNPGSFVLTGMHNGQ
AKHLLLVDPEGTIRTKDRVFDSISHLINYHLESSLPIVSAGSELCLQQPVERKP

Chromosome

Length
Position(start - end)

135,930
51,431,153 - 51,567,084

Orient to Chromosome

minus

Link

Location : (13:51431153-51567084)
/

Detail Map

name	Shc3 (ENSMUSG00000021448)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : Shc3 note : src homology 2 domain-containing transforming protein C3 [Source:MGI Symbol;Acc:MGI:106179]

name	Shc3 (ENSMUSG00000021448)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000021898

name	Shc3 (ENSMUSG00000021448) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS49265.1 Uniprot/SWISSPROT:Q61120 RefSeq_peptide:NP_033193 RefSeq_mRNA:NM_009167.3 UCSC:uc007qmg.1 EMBL:BC103612 EMBL:BC105644 EMBL:BC105645 EMBL:U46854 GO:GO:0005515 GO:GO:0005622 GO:GO:0005886 GO:GO:0007173 GO:GO:0007417 GO:GO:0007611 GO:GO:0019901 GO:GO:0030971 GO:GO:0035249 GO:GO:0035556 MGI_trans_name:Shc3-201 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005886 goslim_goa:GO:0007165 goslim_goa:GO:0007267 goslim_goa:GO:0008150 goslim_goa:GO:0019899 goslim_goa:GO:0048856 goslim_goa:GO:0050877 protein_id:AAC52508.1 protein_id:AAI03613.1 protein_id:AAI05645.1 protein_id:AAI05646.1 Reactome:R-MMU-112399 Reactome:R-MMU-112412 Reactome:R-MMU-1227986 Reactome:R-MMU-1236394 Reactome:R-MMU-1250196 Reactome:R-MMU-1250347 Reactome:R-MMU-1266738 Reactome:R-MMU-1280215 Reactome:R-MMU-1433557 Reactome:R-MMU-162582 Reactome:R-MMU-166520 Reactome:R-MMU-167044 Reactome:R-MMU-168249 Reactome:R-MMU-168256 Reactome:R-MMU-169893 Reactome:R-MMU-170968 Reactome:R-MMU-170984 Reactome:R-MMU-177929 Reactome:R-MMU-179812 Reactome:R-MMU-180336 Reactome:R-MMU-186763 Reactome:R-MMU-186797 Reactome:R-MMU-187037 Reactome:R-MMU-187687 Reactome:R-MMU-187706 Reactome:R-MMU-190236 Reactome:R-MMU-194138 Reactome:R-MMU-1963640 Reactome:R-MMU-2172127 Reactome:R-MMU-2404192 Reactome:R-MMU-2424491 Reactome:R-MMU-2428924 Reactome:R-MMU-2428928 Reactome:R-MMU-2454202 Reactome:R-MMU-2586552 Reactome:R-MMU-2871796 Reactome:R-MMU-372790 Reactome:R-MMU-375165 Reactome:R-MMU-422475 Reactome:R-MMU-4420097 Reactome:R-MMU-449147 Reactome:R-MMU-451927 Reactome:R-MMU-512988 Reactome:R-MMU-5218921 Reactome:R-MMU-5654687 Reactome:R-MMU-5654693 Reactome:R-MMU-5654696 Reactome:R-MMU-5654700 Reactome:R-MMU-5654706 Reactome:R-MMU-5654708 Reactome:R-MMU-5654712 Reactome:R-MMU-5654716 Reactome:R-MMU-5654736 Reactome:R-MMU-5654738 Reactome:R-MMU-5654741 Reactome:R-MMU-5654743 Reactome:R-MMU-5673001 Reactome:R-MMU-5683057 Reactome:R-MMU-5684996 Reactome:R-MMU-74751 Reactome:R-MMU-74752 Reactome:R-MMU-881907 Reactome:R-MMU-912526 UniParc:UPI0000021BF5
definition	note : transcript_id=ENSMUST00000021898 protein_id : ENSMUSP00000021898 translation : MSATRKSRAGDEPLPRPPRGAPHTSDQVLGPGVTYVVKYLGCIEVLRSMRSLDFSTRTQVTREAISRVCEAVPGAKGALKKRKPPSKMLSSILGKSNLQFAGMSISLTISTASLNLRTPDSKQIIANHHMRSISFASGGDPDTTDYVAYVAKDPVNRRACHILECCDGLAQDVIGSIGQAFELRFKQYLQCPSKVPALQDRMQSLDEPWTEEEGDGPDHPYYNSVPTKMPPPGGFLDARLKGRPHAPEAAQFAGKEQTYYQGRHLGDTFGEDWQRAPTRQGSLDIYSTAEGKTHMVPVGETPTYVNTQPVPPQVWPAATSSTESSPRKDLFDMKPFEDALRNQPLGPMLSKAASVECISPVTPRAPDARMLEELNAEPWYQGEMSRKEAEALLREDGDFLVRKSTTNPGSFVLTGMHNGQAKHLLLVDPEGTIRTKDRVFDSISHLINYHLESSLPIVSAGSELCLQQPVERKP

name
type	STS
link
xref	UniSTS_NUM:127063 UniSTS:D13Mit247
definition	note : map_weight=1 standard_name : D13Mit247

name
type	misc_feature
link
xref
definition	note : contig AC159104.2 1..201694(-1)

Polymorphisms Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Shc3 (ENSMUSG00000021448)
Transcript ID	ENSMUST00000021898

Reports
substitution
cSNPs	5
Insertion	111
Deletion	123
SNPs	+1kb 51567495(c.-411A>G), 51567598(c.-514G>C), 51567736(c.-652C>T), 51568542(c.-1458A>G), 51568863(c.-1779A>G), 51569379(c.-2295T>G), 51569502(c.-2418A>G), 51569714(c.-2630A>G), 51570235(c.-3151G>A), 51570248(c.-3164T>C), 51570348(c.-3264G>A), 51570403(c.-3319C>T), 51570568(c.-3484C>A), 51570584(c.-3500A>T), 51570660(c.-3576T>G), 51570677(c.-3593T>C), 51570683(c.-3599A>G), 51570907(c.-3823A>T), 51571113(c.-4029C>T), 51571326(c.-4242A>G), 51571369(c.-4285G>T), 51571387(c.-4303A>C), 51571814(c.-4730G>A), 51571887(c.-4803C>T), 51571889(c.-4805C>T), 51571942(c.-4858C>T), 51571987(c.-4903A>G), 5'UTR CDS 51442744(c.1242A>G), 51442981(c.1005C>T), 51449266(c.802A>G), 51472821(c.405T>C), 51516542(c.168A>G), 3'UTR 51431093(c.60G>T), INTRON 51431347(c.1297-66G>A), 51431490(c.1297-209T>C), 51431620(c.1297-339T>A), 51431819(c.1297-538A>C), 51431832(c.1297-551C>T), 51431848(c.1297-567G>A), 51431950(c.1297-669C>G), 51432027(c.1297-746T>C), 51432095(c.1297-814T>C), 51432123(c.1297-842A>G), 51432189(c.1297-908T>G), 51432213(c.1297-932G>A), 51432337(c.1297-1056G>C), 51432338(c.1297-1057A>C), 51432341(c.1297-1060T>G), 51432358(c.1297-1077G>T), 51432380(c.1297-1099T>C), 51432387(c.1297-1106G>T), 51432434(c.1297-1153A>T), 51432640(c.1297-1359A>G), 51432726(c.1297-1445T>C), 51432829(c.1297-1548T>C), 51432849(c.1297-1568T>C), 51432862(c.1297-1581A>G), 51432880(c.1297-1599C>T), 51432886(c.1297-1605T>C), 51433252(c.1297-1971T>G), 51433977(c.1297-2696A>G), 51434112(c.1297-2831T>C), 51434169(c.1297-2888G>T), 51434240(c.1297-2959G>C), 51434250(c.1297-2969G>A), 51434285(c.1297-3004C>T), 51434415(c.1297-3134G>A), 51434541(c.1297-3260A>G), 51434575(c.1297-3294T>C), 51434839(c.1297-3558G>A), 51435024(c.1297-3743C>G), 51435058(c.1297-3777C>G), 51435061(c.1297-3780A>G), 51435350(c.1297-4069T>A), 51435361(c.1297-4080G>C), 51435365(c.1297-4084A>G), 51435388(c.1297-4107T>C), 51435455(c.1297-4174T>C), 51435486(c.1297-4205T>C), 51435497(c.1297-4216C>T), 51435911(c.1297-4630G>A), 51436159(c.1297-4878G>T), 51436412(c.1297-5131A>T), 51436486(c.1297-5205A>G), 51436694(c.1297-5413T>C), 51436864(c.1297-5583G>A), 51436977(c.1297-5696G>A), 51437087(c.1296+5603A>G), 51437190(c.1296+5500A>G), 51437249(c.1296+5441T>C), 51437277(c.1296+5413C>T), 51437293(c.1296+5397G>A), 51437505(c.1296+5185C>G), 51437539(c.1296+5151A>G), 51437675(c.1296+5015A>G), 51438075(c.1296+4615C>T), 51438097(c.1296+4593T>A), 51438114(c.1296+4576C>T), 51438341(c.1296+4349G>T), 51438446(c.1296+4244C>T), 51438489(c.1296+4201A>G), 51438544(c.1296+4146A>G), 51438591(c.1296+4099G>A), 51438682(c.1296+4008C>T), 51438683(c.1296+4007G>C), 51438826(c.1296+3864A>G), 51438866(c.1296+3824G>A), 51438911(c.1296+3779A>T), 51438922(c.1296+3768G>C), 51439010(c.1296+3680T>G), 51439149(c.1296+3541C>T), 51439237(c.1296+3453T>C), 51439322(c.1296+3368G>A), 51439394(c.1296+3296T>A), 51439395(c.1296+3295A>T), 51439399(c.1296+3291G>A), 51439462(c.1296+3228A>G), 51439483(c.1296+3207T>C), 51439488(c.1296+3202A>T), 51439593(c.1296+3097C>T), 51439596(c.1296+3094G>A), 51439599(c.1296+3091T>C), 51439946(c.1296+2744T>C), 51440038(c.1296+2652G>T), 51440134(c.1296+2556G>A), 51440150(c.1296+2540C>T), 51440185(c.1296+2505G>T), 51440242(c.1296+2448A>G), 51440252(c.1296+2438A>T), 51440575(c.1296+2115A>G), 51440752(c.1296+1938C>T), 51440862(c.1296+1828C>T), 51441030(c.1296+1660C>T), 51441065(c.1296+1625T>C), 51441427(c.1296+1263C>T), 51441431(c.1296+1259A>G), 51441480(c.1296+1210T>A), 51441686(c.1296+1004T>A), 51441777(c.1296+913A>G), 51441784(c.1296+906C>T), 51441809(c.1296+881G>C), 51441927(c.1296+763C>T), 51441930(c.1296+760C>T), 51441973(c.1296+717T>C), 51441989(c.1296+701T>G), 51442063(c.1296+627A>G), 51442232(c.1296+458G>A), 51442440(c.1296+250T>C), 51442544(c.1296+146T>C), 51442601(c.1296+89A>G), 51442638(c.1296+52T>C), 51442668(c.1296+22T>C), 51443282(c.1001-297G>A), 51443337(c.1001-352G>T), 51443338(c.1001-353T>G), 51443409(c.1001-424T>C), 51443455(c.1001-470G>A), 51443470(c.1001-485T>C), 51443501(c.1001-516A>G), 51443518(c.1001-533T>C), 51443542(c.1001-557A>G), 51443561(c.1001-576T>C), 51443573(c.1001-588G>A), 51443617(c.1001-632G>A), 51443674(c.1001-689C>T), 51443678(c.1001-693T>A), 51443709(c.1001-724A>G), 51443717(c.1001-732G>A), 51443728(c.1001-743G>A), 51443824(c.1001-839A>G), 51443829(c.1001-844G>A), 51443863(c.1001-878A>G), 51443873(c.1001-888C>T), 51443889(c.1001-904C>T), 51443911(c.1001-926G>T), 51444165(c.1001-1180A>G), 51444166(c.1001-1181C>T), 51444260(c.1001-1275T>C), 51444264(c.1001-1279T>C), 51444267(c.1001-1282C>T), 51444288(c.1001-1303A>T), 51444467(c.1001-1482A>G), 51444468(c.1001-1483T>C), 51444477(c.1001-1492G>T), 51444482(c.1001-1497G>A), 51444606(c.1001-1621G>T), 51444665(c.1001-1680G>A), 51444716(c.1001-1731G>A), 51444810(c.1001-1825T>C), 51445704(c.1000+2186G>A), 51445740(c.1000+2150T>A), 51445745(c.1000+2145T>C), 51445748(c.1000+2142C>T), 51445797(c.1000+2093A>G), 51445821(c.1000+2069C>T), 51446066(c.1000+1824G>A), 51446117(c.1000+1773C>T), 51446295(c.1000+1595G>A), 51446502(c.1000+1388T>C), 51446563(c.1000+1327A>G), 51446715(c.1000+1175T>A), 51446884(c.1000+1006T>G), 51447154(c.1000+736C>T), 51447419(c.1000+471A>G), 51447511(c.1000+379G>A), 51447841(c.1000+49A>G), 51448814(c.841+413A>G), 51448853(c.841+374A>G), 51449007(c.841+220T>C), 51449026(c.841+201C>G), 51449125(c.841+102A>C), 51449126(c.841+101A>G), 51449162(c.841+65G>A), 51449166(c.841+61G>T), 51449382(c.754-68C>G), 51449402(c.754-88G>A), 51449793(c.754-479G>A), 51450120(c.754-806T>C), 51450135(c.754-821C>T), 51450141(c.754-827G>T), 51450147(c.754-833T>C), 51450151(c.754-837C>T), 51450166(c.754-852A>G), 51450389(c.754-1075A>G), 51450425(c.753+1065T>C), 51450441(c.753+1049T>C), 51450462(c.753+1028C>T), 51450739(c.753+751T>C), 51450785(c.753+705T>A), 51450789(c.753+701C>T), 51450824(c.753+666C>T), 51450888(c.753+602C>T), 51450895(c.753+595T>C), 51451128(c.753+362A>G), 51451147(c.753+343T>C), 51451162(c.753+328A>T), 51451216(c.753+274T>C), 51451249(c.753+241A>G), 51451434(c.753+56T>C), 51451481(c.753+9G>A), 51451662(c.603-22A>G), 51451753(c.603-113G>A), 51451763(c.603-123C>T), 51451784(c.603-144T>C), 51451787(c.603-147C>T), 51451860(c.603-220G>A), 51451909(c.603-269C>A), 51452040(c.603-400T>C), 51452065(c.603-425A>C), 51453044(c.603-1404C>T), 51453068(c.603-1428C>T), 51453112(c.603-1472G>A), 51453117(c.603-1477A>G), 51453121(c.603-1481G>T), 51453484(c.603-1844C>G), 51453487(c.603-1847T>C), 51453515(c.603-1875G>A), 51453726(c.603-2086G>A), 51453795(c.603-2155T>A), 51454071(c.603-2431T>C), 51454320(c.603-2680G>T), 51454402(c.603-2762G>A), 51454529(c.603-2889A>G), 51455353(c.603-3713C>T), 51455602(c.603-3962A>G), 51456249(c.603-4609G>A), 51456461(c.603-4821G>A), 51456841(c.602+4477A>C), 51456899(c.602+4419T>C), 51456916(c.602+4402A>T), 51456960(c.602+4358C>T), 51456992(c.602+4326G>A), 51456996(c.602+4322G>C), 51457103(c.602+4215C>G), 51457155(c.602+4163C>G), 51457341(c.602+3977A>C), 51457372(c.602+3946C>A), 51457373(c.602+3945A>G), 51457386(c.602+3932A>T), 51457463(c.602+3855G>A), 51457474(c.602+3844T>C), 51457477(c.602+3841C>T), 51457637(c.602+3681T>A), 51457881(c.602+3437C>G), 51457933(c.602+3385G>A), 51458043(c.602+3275A>G), 51458165(c.602+3153G>A), 51458176(c.602+3142A>G), 51458197(c.602+3121A>G), 51458336(c.602+2982A>T), 51458410(c.602+2908A>G), 51458417(c.602+2901A>G), 51458456(c.602+2862A>G), 51458503(c.602+2815T>C), 51458547(c.602+2771C>T), 51458570(c.602+2748T>C), 51458572(c.602+2746T>G), 51458669(c.602+2649T>C), 51458886(c.602+2432A>G), 51458888(c.602+2430C>T), 51459136(c.602+2182T>C), 51459197(c.602+2121A>G), 51459222(c.602+2096A>G), 51459466(c.602+1852A>C), 51459511(c.602+1807G>A), 51459609(c.602+1709G>A), 51459919(c.602+1399G>A), 51460043(c.602+1275A>G), 51460350(c.602+968C>T), 51460365(c.602+953T>C), 51460471(c.602+847T>C), 51460479(c.602+839G>A), 51460507(c.602+811A>G), 51460731(c.602+587T>C), 51460908(c.602+410G>A), 51460934(c.602+384C>T), 51460944(c.602+374G>T), 51461525(c.476-81T>A), 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51549651(c.114+17320C>T), 51549710(c.114+17261C>T), 51549731(c.114+17240T>C), 51549777(c.114+17194A>G), 51549835(c.114+17136A>G), 51549853(c.114+17118C>T), 51549877(c.114+17094A>G), 51549880(c.114+17091A>G), 51549884(c.114+17087A>G), 51549887(c.114+17084A>G), 51549890(c.114+17081A>G), 51549893(c.114+17078A>G), 51549896(c.114+17075A>G), 51549899(c.114+17072A>G), 51549900(c.114+17071C>T), 51550088(c.114+16883G>A), 51550284(c.114+16687G>T), 51550291(c.114+16680G>T), 51550325(c.114+16646T>G), 51550327(c.114+16644T>C), 51550462(c.114+16509A>G), 51550582(c.114+16389A>G), 51550590(c.114+16381G>T), 51550705(c.114+16266C>A), 51550817(c.114+16154A>G), 51550906(c.114+16065G>T), 51550973(c.114+15998G>A), 51551006(c.114+15965G>A), 51551017(c.114+15954C>G), 51551035(c.114+15936C>T), 51551345(c.114+15626G>T), 51551416(c.114+15555G>T), 51551429(c.114+15542T>C), 51551457(c.114+15514A>G), 51551476(c.114+15495G>C), 51551502(c.114+15469T>C), 51551575(c.114+15396C>T), 51551616(c.114+15355G>A), 51551617(c.114+15354T>C), 51551730(c.114+15241T>C), 51551733(c.114+15238C>A), 51551771(c.114+15200C>T), 51551877(c.114+15094C>T), 51551897(c.114+15074A>G), 51551952(c.114+15019A>G), 51551973(c.114+14998G>A), 51551982(c.114+14989A>G), 51552146(c.114+14825C>G), 51552193(c.114+14778C>T), 51552197(c.114+14774G>A), 51552211(c.114+14760A>G), 51552217(c.114+14754T>C), 51552251(c.114+14720T>C), 51552287(c.114+14684C>T), 51552318(c.114+14653A>G), 51552380(c.114+14591A>G), 51552870(c.114+14101A>G), 51552948(c.114+14023G>A), 51552950(c.114+14021T>G), 51552953(c.114+14018C>G), 51552991(c.114+13980T>C), 51553010(c.114+13961G>A), 51553188(c.114+13783G>A), 51553227(c.114+13744C>T), 51553228(c.114+13743A>C), 51553248(c.114+13723T>C), 51553450(c.114+13521T>C), 51553457(c.114+13514T>C), 51553648(c.114+13323A>T), 51553678(c.114+13293C>T), 51553810(c.114+13161C>T), 51553816(c.114+13155T>C), 51553828(c.114+13143C>T), 51553832(c.114+13139T>C), 51553836(c.114+13135A>T), 51554066(c.114+12905G>A), 51554087(c.114+12884T>C), 51554177(c.114+12794G>T), 51554290(c.114+12681C>T), 51554310(c.114+12661T>C), 51554409(c.114+12562C>A), 51554414(c.114+12557T>C), 51554480(c.114+12491C>A), 51554502(c.114+12469G>A), 51554518(c.114+12453C>T), 51554580(c.114+12391A>G), 51554599(c.114+12372A>G), 51554608(c.114+12363G>A), 51554667(c.114+12304T>C), 51554765(c.114+12206C>A), 51554768(c.114+12203C>T), 51554769(c.114+12202G>A), 51554771(c.114+12200T>C), 51554933(c.114+12038A>G), 51555088(c.114+11883T>C), 51555165(c.114+11806T>C), 51555244(c.114+11727C>A), 51555249(c.114+11722G>A), 51555255(c.114+11716A>T), 51555259(c.114+11712G>A), 51555262(c.114+11709G>A), 51555275(c.114+11696T>C), 51555280(c.114+11691G>A), 51555380(c.114+11591A>C), 51555404(c.114+11567G>A), 51555434(c.114+11537C>T), 51555435(c.114+11536C>T), 51555436(c.114+11535G>A), 51555454(c.114+11517T>G), 51555510(c.114+11461T>C), 51555512(c.114+11459T>G), 51555555(c.114+11416C>A), 51555640(c.114+11331A>G), 51555758(c.114+11213T>C), 51555760(c.114+11211T>C), 51555764(c.114+11207A>G), 51555834(c.114+11137A>C), 51555885(c.114+11086C>T), 51555935(c.114+11036T>C), 51555977(c.114+10994T>A), 51556063(c.114+10908G>A), 51556075(c.114+10896G>A), 51556110(c.114+10861G>A), 51556167(c.114+10804C>T), 51556170(c.114+10801G>A), 51556257(c.114+10714T>C), 51556296(c.114+10675T>G), 51556401(c.114+10570C>T), 51557001(c.114+9970A>G), 51557020(c.114+9951C>T), 51557196(c.114+9775G>A), 51557242(c.114+9729C>T), 51557269(c.114+9702T>G), 51557291(c.114+9680T>C), 51557327(c.114+9644C>T), 51557352(c.114+9619G>C), 51557397(c.114+9574T>A), 51557421(c.114+9550A>G), 51557506(c.114+9465G>A), 51557528(c.114+9443A>G), 51557557(c.114+9414A>T), 51557606(c.114+9365T>C), 51557699(c.114+9272G>A), 51557772(c.114+9199A>G), 51557779(c.114+9192T>C), 51557795(c.114+9176G>T), 51557798(c.114+9173G>A), 51557866(c.114+9105T>C), 51557869(c.114+9102T>C), 51557942(c.114+9029T>C), 51557954(c.114+9017A>G), 51557958(c.114+9013T>C), 51558000(c.114+8971G>A), 51558012(c.114+8959G>C), 51558036(c.114+8935G>A), 51558120(c.114+8851T>C), 51558132(c.114+8839A>G), 51558144(c.114+8827T>C), 51558159(c.114+8812T>G), 51558218(c.114+8753C>G), 51558220(c.114+8751C>A), 51558349(c.114+8622C>T), 51558467(c.114+8504A>G), 51558474(c.114+8497T>C), 51558515(c.114+8456T>A), 51558524(c.114+8447A>C), 51558553(c.114+8418T>A), 51558582(c.114+8389G>A), 51558633(c.114+8338T>C), 51558713(c.114+8258G>A), 51558768(c.114+8203C>T), 51558950(c.114+8021T>G), 51558965(c.114+8006G>A), 51559038(c.114+7933T>C), 51559045(c.114+7926A>G), 51559061(c.114+7910G>C), 51559194(c.114+7777G>A), 51559239(c.114+7732T>C), 51559456(c.114+7515C>T), 51559709(c.114+7262C>A), 51559818(c.114+7153T>C), 51559831(c.114+7140T>C), 51559834(c.114+7137A>G), 51559835(c.114+7136C>T), 51559855(c.114+7116T>A), 51559884(c.114+7087G>A), 51559952(c.114+7019C>G), 51560002(c.114+6969C>T), 51560151(c.114+6820C>T), 51560197(c.114+6774G>A), 51560201(c.114+6770G>T), 51560323(c.114+6648A>G), 51560354(c.114+6617C>G), 51560495(c.114+6476C>A), 51560797(c.114+6174G>T), 51561298(c.114+5673C>A), 51561325(c.114+5646T>C), 51561709(c.114+5262T>C), 51561761(c.114+5210A>G), 51561863(c.114+5108T>C), 51562034(c.114+4937C>T), 51562350(c.114+4621C>T), 51562422(c.114+4549G>A), 51562614(c.114+4357C>A), 51562675(c.114+4296T>C), 51562826(c.114+4145T>C), 51562976(c.114+3995C>G), 51563115(c.114+3856T>G), 51563177(c.114+3794G>A), 51563227(c.114+3744G>C), 51563249(c.114+3722T>C), 51563486(c.114+3485T>C), 51563508(c.114+3463G>A), 51563569(c.114+3402C>T), 51563855(c.114+3116C>G), 51563905(c.114+3066A>C), 51563983(c.114+2988T>G), 51563984(c.114+2987G>C), 51564022(c.114+2949T>C), 51564189(c.114+2782C>T), 51564190(c.114+2781G>A), 51564327(c.114+2644A>G), 51564380(c.114+2591T>A), 51564440(c.114+2531C>T), 51564444(c.114+2527T>C), 51564546(c.114+2425A>T), 51564572(c.114+2399C>T), 51564689(c.114+2282A>G), 51564715(c.114+2256A>G), 51564732(c.114+2239G>A), 51564832(c.114+2139G>A), 51564877(c.114+2094G>A), 51565232(c.114+1739C>A), 51565349(c.114+1622C>T), 51565390(c.114+1581C>T), 51565558(c.114+1413T>G), 51565726(c.114+1245T>C), 51565819(c.114+1152G>A), 51566157(c.114+814C>A), 51566516(c.114+455C>T), 51566648(c.114+323C>T), 51566813(c.114+158G>A), 51566857(c.114+114C>G), 51566925(c.114+46G>A), -1kb 51426056(c.5097C>T), 51426144(c.5009C>T), 51426146(c.5007A>G), 51426281(c.4872G>C), 51426313(c.4840T>C), 51426352(c.4801T>C), 51426490(c.4663G>A), 51426700(c.4453A>G), 51426735(c.4418G>A), 51426962(c.4191T>C), 51426983(c.4170T>C), 51427016(c.4137G>A), 51427052(c.4101A>G), 51427072(c.4081G>A), 51427104(c.4049C>T), 51427277(c.3876T>A), 51427296(c.3857G>T), 51427352(c.3801T>C), 51427373(c.3780T>A), 51427429(c.3724G>A), 51427491(c.3662T>C), 51427502(c.3651G>A), 51427522(c.3631A>G), 51427590(c.3563A>G), 51427593(c.3560G>A), 51427600(c.3553A>G), 51427862(c.3291T>C), 51428003(c.3150C>T), 51428066(c.3087G>C), 51428144(c.3009C>G), 51428145(c.3008A>T), 51428150(c.3003T>C), 51428164(c.2989T>C), 51428224(c.2929G>A), 51428648(c.2505T>C), 51428818(c.2335T>C), 51428869(c.2284A>G), 51429056(c.2097A>G), 51429532(c.1621T>C), 51429535(c.1618A>G), 51429554(c.1599A>G), 51429572(c.1581T>C), 51429597(c.1556A>G), 51429750(c.1403C>G), 51429776(c.1377A>C), 51429800(c.1353G>A), 51429856(c.1297G>A), 51429859(c.1294C>T), 51429860(c.1293A>C), 51430208(c.945C>T), 51430473(c.680A>C), 51430634(c.519T>C), 51430778(c.375T>C),
Insertions	+1kb 51568241 (c.-1158_-1157insT), 51568243 (c.-1160_-1159insT), 51568524 (c.-1441_-1440insTCTC), 51568653 (c.-1570_-1569insTCTT), 51569621 (c.-2538_-2537insT), 51570183 (c.-3100_-3099insT), 51570707 (c.-3624_-3623insG), 5'UTR CDS 3'UTR INTRON 51435625 (c.1297-4345dupA), 51438100 (c.1296+4589_1296+4590insT), 51441857 (c.1296+832dupT), 51445116 (c.1001-2132_1001-2131insGGTA), 51446987 (c.1000+902_1000+903insT), 51449675 (c.754-362dupA), 51451870 (c.603-231_603-230insGT), 51453805 (c.603-2167_603-2166dupGT), 51454775 (c.603-3136dupA), 51456850 (c.602+4467_602+4468insTC), 51457568 (c.602+3749_602+3750insCAACTA), 51458260 (c.602+3057dupG), 51458710 (c.602+2607_602+2608insATA), 51459124 (c.602+2193dupT), 51461530 (c.476-87dupT), 51462534 (c.476-1091_476-1090insT), 51465318 (c.475+1195_475+1196insA), 51465523 (c.475+988_475+990dupCAA), 51466591 (c.424-27_424-26insAA), 51466597 (c.424-33_424-32insA), 51467081 (c.424-520_424-517dupTAAA), 51467519 (c.424-955dupT), 51468967 (c.424-2403_424-2402insA), 51469102 (c.424-2538_424-2537insTC), 51470404 (c.423+2398_423+2399insTATA), 51470910 (c.423+1891_423+1892dupAG), 51470914 (c.423+1888_423+1889insAG), 51470976 (c.423+1826_423+1827insT), 51472032 (c.423+767_423+770dupGTTT), 51473147 (c.370-292dupA), 51476626 (c.369+3467_369+3472dupGTGTGT), 51477806 (c.369+2292dupT), 51480469 (c.250-252dupC), 51482067 (c.249+813_249+814dupTA), 51482320 (c.249+561_249+562insC), 51483604 (c.186-660dupT), 51486034 (c.186-3090dupA), 51487417 (c.186-4473_186-4472insCA), 51487988 (c.186-5044_186-5043insGCAGAG), 51488226 (c.186-5282dupA), 51488720 (c.186-5776_186-5775insC), 51489375 (c.186-6431_186-6430insTGCTGTG), 51490618 (c.186-7674_186-7673insTG), 51491223 (c.186-8279_186-8278insGG), 51491506 (c.186-8562dupT), 51491787 (c.186-8843_186-8842insC), 51491950 (c.186-9006_186-9005insA), 51491955 (c.186-9011_186-9010insA), 51494715 (c.186-11771_186-11770insC), 51494854 (c.186-11912_186-11910dupCCT), 51495286 (c.186-12342_186-12341insC), 51495716 (c.186-12773_186-12772dupGT), 51496171 (c.186-13227_186-13226insAAC), 51496251 (c.186-13307_186-13306insACCTCCT), 51496475 (c.186-13534_186-13531dupTTTT), 51500343 (c.185+16181_185+16182insG), 51500601 (c.185+15923_185+15924insT), 51502565 (c.185+13959_185+13960insT), 51503638 (c.185+12886dupT), 51504043 (c.185+12481_185+12482insTC), 51505537 (c.185+10987dupA), 51505936 (c.185+10588_185+10589insC), 51506013 (c.185+10511_185+10512insAA), 51506437 (c.185+10087_185+10088insCAC), 51507850 (c.185+8674_185+8675insT), 51510602 (c.185+5922_185+5923insGCTGGAG), 51515072 (c.185+1452_185+1453insGGGAAGA), 51516901 (c.115-307_115-306insA), 51517256 (c.115-662dupT), 51519589 (c.115-2998_115-2995dupTCAT), 51522152 (c.115-5560_115-5558dupTTT), 51523182 (c.115-6588_115-6587insT), 51523203 (c.115-6609_115-6608insTT), 51523297 (c.115-6703dupG), 51523827 (c.115-7233_115-7232insTTCT), 51525803 (c.115-9210_115-9209dupGT), 51525989 (c.115-9398_115-9395dupTCTC), 51531170 (c.115-14576_115-14575insAC), 51532162 (c.115-15568dupT), 51532793 (c.115-16202_115-16199dupGCTG), 51533565 (c.115-16971_115-16970insAG), 51539619 (c.115-23025_115-23024insT), 51542104 (c.114+24865_114+24866dupGT), 51544574 (c.114+22396_114+22397insGG), 51544633 (c.114+22337_114+22338insTTT), 51546589 (c.114+20381_114+20382insT), 51552097 (c.114+14873dupG), 51555995 (c.114+10975_114+10976insA), 51556014 (c.114+10956_114+10957insG), 51556040 (c.114+10930_114+10931insTC), 51556608 (c.114+10362_114+10363insAGCAAAAGT), 51556942 (c.114+10028dupT), 51558088 (c.114+8881_114+8882dupTT), 51558801 (c.114+8168_114+8169dupGT), 51558814 (c.114+8156_114+8157insTA), 51558912 (c.114+8058_114+8059insAG), 51559109 (c.114+7861_114+7862insT), 51562369 (c.114+4601_114+4602insGG), 51563675 (c.114+3295dupT), -1kb 51426835 (c.4317_4318insGGGT), 51429439 (c.1713_1714insG), 51429452 (c.1700_1701insGT), 51429466 (c.1686_1687insTG), 51429698 (c.1454_1455insTGT),
Deletions	+1kb 51568190 (c.-1108_-1107delTT), 51568343 (c.-1262_-1260delTTT), 51568459 (c.-1377_-1376delTT), 51568945 (c.-1862delG), 51569636 (c.-2557_-2553delTATTT), 5'UTR CDS 3'UTR INTRON 51432477 (c.1297-1197delT), 51432624 (c.1297-1345_1297-1344delTG), 51433092 (c.1297-1812delA), 51433923 (c.1297-2644_1297-2643delCG), 51437547 (c.1296+5136_1296+5142delCCTGGGG), 51438615 (c.1296+4074delA), 51439181 (c.1296+3504_1296+3508delGGGTT), 51439283 (c.1296+3401_1296+3406delTAGTGC), 51439360 (c.1296+3328_1296+3329delTT), 51440199 (c.1296+2487_1296+2490delTTTG), 51440498 (c.1296+2190_1296+2191delCA), 51444033 (c.1001-1052_1001-1049delTACA), 51444199 (c.1001-1215delA), 51446226 (c.1000+1663delT), 51446278 (c.1000+1607_1000+1611delCACCT), 51446462 (c.1000+1426_1000+1427delCC), 51446534 (c.1000+1352_1000+1355delCATA), 51446679 (c.1000+1204_1000+1210delTTCCTTG), 51448568 (c.842-521delA), 51448917 (c.841+309delT), 51449101 (c.841+119_841+125delACATCAG), 51450515 (c.753+973_753+974delCT), 51451196 (c.753+293delT), 51453221 (c.603-1583_603-1582delAT), 51455134 (c.603-3496_603-3495delAG), 51457739 (c.602+3578delC), 51457945 (c.602+3372delC), 51460662 (c.602+653_602+655delTTT), 51463158 (c.476-1717_476-1715delAGG), 51463225 (c.476-1783_476-1782delTC), 51463649 (c.476-2209_476-2206delTACA), 51464235 (c.475+2270_475+2278delACCTCGCCC), 51465027 (c.475+1481_475+1486delTGTTTT), 51465889 (c.475+624delA), 51466387 (c.475+120_475+126delTGCCACG), 51466577 (c.424-17_424-13delTTTTC), 51468900 (c.424-2342_424-2336delTTTTTTT), 51469298 (c.424-2734delT), 51472444 (c.423+356_423+358delAAC), 51472960 (c.370-105delG), 51473132 (c.370-277delC), 51475963 (c.370-3108delC), 51477885 (c.369+2213delG), 51478029 (c.369+2066_369+2069delTGTG), 51478039 (c.369+2056_369+2059delTGTG), 51478072 (c.369+2023_369+2026delGTTA), 51478487 (c.369+1610_369+1611delAG), 51478987 (c.369+1108_369+1111delCTCT), 51479084 (c.369+1014delA), 51481266 (c.250-1049delC), 51481588 (c.249+1291_249+1293delGAA), 51482305 (c.249+575_249+576delAA), 51482830 (c.249+51delG), 51486319 (c.186-3378_186-3375delCCCA), 51486374 (c.186-3430delA), 51486381 (c.186-3437delA), 51486895 (c.186-3951delA), 51486909 (c.186-3970_186-3965delCCCCCC), 51487514 (c.186-4570delA), 51488712 (c.186-5768delC), 51488983 (c.186-6041_186-6039delCTG), 51489888 (c.186-6948_186-6944delGGAGG), 51491908 (c.186-8968_186-8964delAGACT), 51492674 (c.186-9735_186-9730delTGGGGG), 51494450 (c.186-11507_186-11506delAG), 51495454 (c.186-12510delG), 51498259 (c.186-15315delT), 51498511 (c.186-15569_186-15567delTGA), 51499665 (c.186-16725_186-16721delAGAAA), 51501042 (c.185+15478_185+15482delTGGGG), 51501364 (c.185+15159_185+15160delCC), 51502601 (c.185+13915_185+13923delCTTGTCTTG), 51506118 (c.185+10406delA), 51506120 (c.185+10404delA), 51508786 (c.185+7736_185+7738delTGG), 51511017 (c.185+5507delT), 51512449 (c.185+4075delG), 51513455 (c.185+3069delG), 51514358 (c.185+2163_185+2166delGAGA), 51515848 (c.185+668_185+676delTTCTGCCCC), 51516259 (c.185+265delG), 51520541 (c.115-3949_115-3947delTTT), 51522498 (c.115-5905_115-5904delGC), 51522514 (c.115-5925_115-5920delATATAC), 51531230 (c.115-14637_115-14636delAC), 51533400 (c.115-16806delT), 51533736 (c.115-17142delT), 51534135 (c.115-17541delT), 51534936 (c.115-18344_115-18342delAGT), 51535366 (c.115-18772delA), 51538273 (c.115-21680_115-21679delTA), 51539046 (c.115-22452delG), 51539607 (c.115-23014_115-23013delTG), 51539613 (c.115-23019delG), 51539901 (c.115-23307delA), 51541695 (c.115-25101delA), 51541903 (c.114+25063_114+25067delTGAAT), 51544517 (c.114+22453delA), 51546439 (c.114+20531delA), 51547760 (c.114+19210delT), 51548855 (c.114+18112_114+18115delAGAA), 51550720 (c.114+16243_114+16250delGGAGAGAG), 51551072 (c.114+15896_114+15898delAGC), 51551077 (c.114+15893delG), 51552565 (c.114+14401_114+14405delCCTTA), 51552912 (c.114+14055_114+14058delGTCA), 51554368 (c.114+12602delA), 51554998 (c.114+11971_114+11972delAT), 51556670 (c.114+10300delA), 51556679 (c.114+10291delA), 51557210 (c.114+9759_114+9760delAA), 51559139 (c.114+7830_114+7831delCA), 51562006 (c.114+4960_114+4964delGCATG), 51563972 (c.114+2998delG), 51564376 (c.114+2593_114+2594delCT), 51564613 (c.114+2357delA), 51566036 (c.114+931_114+934delCCCC), -1kb 51428601 (c.2547_2551delAAAAA),
coding sequence substitutions
premature termination by the nucleotide substitution	0
synonymous num	4
non-synonymous num	1
synonymous substitutions	51442744 (p.Thr414Thr), 51442981 (p.Pro335Pro), 51472821 (p.Phe135Phe), 51516542 (p.Thr56Thr),
non-synonymous substitutions	51449266 (p.Thr268Ala),
B6 transcript (ENSMUST00000021898)	MSATRKSRAGDEPLPRPPRGAPHTSDQVLGPGVTYVVKYLGCIEVLRSMRSLDFSTRTQV TREAISRVCEAVPGAKGALKKRKPPSKMLSSILGKSNLQFAGMSISLTISTASLNLRTPD SKQIIANHHMRSISFASGGDPDTTDYVAYVAKDPVNRRACHILECCDGLAQDVIGSIGQA FELRFKQYLQCPSKVPALQDRMQSLDEPWTEEEGDGPDHPYYNSVPTKMPPPGGFLDARL KGRPHAPEAAQFAGKEQTYYQGRHLGDTFGEDWQRAPTRQGSLDIYSTAEGKTHMVPVGE TPTYVNTQPVPPQVWPAATSSTESSPRKDLFDMKPFEDALRNQPLGPMLSKAASVECISP VTPRAPDARMLEELNAEPWYQGEMSRKEAEALLREDGDFLVRKSTTNPGSFVLTGMHNGQ AKHLLLVDPEGTIRTKDRVFDSISHLINYHLESSLPIVSAGSELCLQQPVERKP*
MSMv4 transcript	MSATRKSRAGDEPLPRPPRGAPHTSDQVLGPGVTYVVKYLGCIEVLRSMRSLDFSTRTQV TREAISRVCEAVPGAKGALKKRKPPSKMLSSILGKSNLQFAGMSISLTISTASLNLRTPD SKQIIANHHMRSISFASGGDPDTTDYVAYVAKDPVNRRACHILECCDGLAQDVIGSIGQA FELRFKQYLQCPSKVPALQDRMQSLDEPWTEEEGDGPDHPYYNSVPTKMPPPGGFLDARL KGRPHAPEAAQFAGKEQTYYQGRHLGDAFGEDWQRAPTRQGSLDIYSTAEGKTHMVPVGE TPTYVNTQPVPPQVWPAATSSTESSPRKDLFDMKPFEDALRNQPLGPMLSKAASVECISP VTPRAPDARMLEELNAEPWYQGEMSRKEAEALLREDGDFLVRKSTTNPGSFVLTGMHNGQ AKHLLLVDPEGTIRTKDRVFDSISHLINYHLESSLPIVSAGSELCLQQPVERKP*
homology	99.79 (475 / 475)

Exon Detail Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Shc3 (ENSMUSG00000021448)
Transcript ID	ENSMUST00000021898


..........GTCAGACACTTCTGGGCTTCATCCACATGAGCTGAGCAAGGGAAGAGCAA
GCCATTGCACGGAATAATGGGTTGCGGAAAGTTCAAGAGATCATTTGACGGGACTGGATT
TACCTTTGGCACAGATGCGGGATGGGGAGGGGGTAGGTGAAAAGGCAAAGACTGGAAGGA
AATATCTGCGAAGGTAGAAAAAGGAAATTTGAGAACTGATTGGCTGTAGTTGCTGTCAGC
GGGTGGATGTCGTTTTCTTCTCTCTCTTTTTGCTACAGGAAGTGATTTGCGGAGCTCACC
GAGCCTTTGTTGAGAAGGGTCTCCTCAGAGTGAGTCACGCTTTTGCTGGGAGCAGCCCTG
TGCAGCTGGCCGCTCGCTCCATCAGCCGCAACTATGACTTTTGCAAGGCAAGCGTTCCAC
CCCAACCCTCGGTCTCCAGGGCCCGCGCTGCGTGGCTGCTGCTCTGCTGCCTTGTAACGG
TGAAAAGGGCTCGGTCCTCGGCCTCGGCTGTCCCTCTCCGGAAAGGCTGTCCTGGGACTC
GGGCTCCTCGTCCCGCTCGGGGGACCGCGGCTCGTGTGCTATGCGCGGCAGTCCGCGCCG
GGGCCGGCAGCAGCAGCGCCCGGGTGGATGCGGCGAGCCCACGGAGGGGCATGCTTCCAC
GCACCAAGTACAACCGCTTCAGGAATGACTCGGTGACATCGGTCGATGACCTTCTCCACA
GCCTGTCGGTGAGCGGCAGCGGCGGCAAGGTCTCGGCGGAGCCCGCGGCGAGCCCCTACC
TGGTGTCGGGCGAGGCGCTGCGCAAGGCGCCGGACGATGGGCCCGGCAGCCTGGGCCACC
TGCTCCACAAGGTGTCCCACTTGAAACTCTCCAGCTCCGGCCTGCGTGGCCTGTCGTCGG
CCGCCCGGGAGCGGGCAGGAGCGCGGCTCTCGGGCAGCTGCAGCGCGCCCAGCCTGGCGG
CCCCGGACGGCGGCAGCGCGACCCCCGGGTCCCGCGCCCCGGCCGCCAGC
ATGAGTGCCACCAGGAAGAGCCGGGCCGGCGACGAGCCACTGCCCAGGCCCCCTCGGGGCGCGCCGCACACCAGCGATCAGGTGCTGGGGCCGGGAGTCACCTATGTGGTCAAG
GTGGGTAACCCGAGCACACTGCTGG..........CATGATCTATTTCTTCCCCTTACAG
TACTTGGGCTGCATCGAAGTTCTGCGCTCAATGAGGTCTCTTGACTTCAGTACGAGAACTCAGGTTACCAG
GTAAGCATTCTTCAAAGTGGATGCC..........AAAGTGAATTTCTCCCTGCCCTTAG
GGAAGCCATCAGCCGTGTCTGCGAAGCTGTGCCAGGTGCCAAAGGAGCCCTCAAGAAGAGAAAG
GTACGGTCACCCTCACTGTCACGTC..........AATCTCTCCCCCTTGGATTTCACAG
CCGCCGAGTAAGATGCTGTCCAGCATCCTGGGGAAGAGCAACCTCCAGTTCGCAGGGATGAGCATCTCCCTGACCATCTCCACCGCCAGCCTGAATCTGCGCACTCCTGACTCCAAACAG
GTGTGTGGCTGCCCAGGGTAGACAT..........AGTCTCCCTTTTTTTCTCCTGACAG
ATCATAGCGAACCATCATATGCGGTCTATCTCTTTCGCCTCAGGGGGAGACCCG
GTAAGTGGCCTTTGGTTTGTTTCTC..........TCTTTTTTTTTTCTTCCTTCCACAG
GACACAACGGACTATGTTGCCTATGTCGCTAAGGACCCTGTCAATCGCAGAG
GTGAGCAATGCCCGACCCATTTAAT..........GAGTTCATGTCCTCTTTTCTCCAAG
CTTGCCACATTCTGGAATGCTGTGACGGGCTAGCCCAAGATGTCATTGGCTCCATCGGACAAGCCTTTGAACTCCGGTTCAAACAGTATTTGCAGTGCCCTTCCAAGGTTCCTGCCCTCCAGGACCG
GTGAGTAGCAGGGCCTGTCTTTCTC..........AAGGTCCCTGAAAATCTTTTAACAG
AATGCAGAGTCTGGATGAGCCATGGACTGAAGAAGAGGGAGATGGCCCTGATCACCCATACTACAACAGCGTTCCCACCAAGATGCCTCCCCCAGGGGGGTTTCTGGATGCTCGATTGAAAGGCAGACCCCACGCTCCTGAGGCAGCCCAG
GTAAGTTGAGGGGTTCTCTTCCTGG..........TCTGAATATTGGTATGTGTCTCTAG
TTTGCAGGAAAAGAGCAAACTTATTACCAGGGAAGACACTTAGGAGATGCATTTGGTGAAGACTGGCAGCGAGCACCCACCAGGCAAG
GTAAGAGGCAAAGTGAAGGGGGTGG..........AACAGGACTCACTCTTTTGCTTCAG
GCTCCTTGGACATCTATAGCACAGCAGAAGGGAAAACTCACATGGTTCCTGTAGGAGAAACACCAACCTATGTCAACACCCAGCCAGTCCCACCACAGGTGTGGCCAGCAGCAACCAGCAGCACTGAGAGCAGCCCACGGAAGGACCTCTTTGACATGA
GTAGGCATCCATCGCTTTTTCTGTA..........TGTCACTGTCATATGTTGTTGACAG
AGCCTTTTGAAGATGCCCTGAGAAACCAGCCCCTGGGCCCCATGTTGAGCAAAGCCGCGTCTGTGGAGTGCATCAGCCCGGTCACACCCAGAGCCCCGGATGCCAGGATGCTGGAGGAGCTTAACGCTGAGCCCTGGTACCAAGGAGAGATGAGCAGGAAGGAGGCAGAGGCCCTGCTACGGGAAGATGGAGACTTCCTAGTGAGGAAGAGTACCACCAACCCCGGCTCCTTTGTCCTCACGGGCATGCACAATGGGCAGGCCAAGCACCTGCTGCTGGTGGACCCGGAAGGCACG
GTGAGGCATGGGCAGGCACCTCCCA..........CCTCTCTTTCCTTTTGTCCTCACAG
ATCCGGACGAAGGACAGGGTCTTTGACAGCATCAGCCACCTCATCAATTACCACCTCGAGAGCAGCCTGCCCATTGTCTCTGCCGGGAGTGAGCTTTGTCTCCAGCAACCAGTGGAGAGGAAACCCTGAGCTTGCCCAGCGCCCCAGCCCCCATACCTTATGCCAGGTCAGGAAGACCTGGGCTCTGCTGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTGGGCCCATCACCATTAAA
AGCCCCCCCAGGGAGGTTTCCTTCAAGTTCAAATTTCATAAATATGTTCACACGATTCAG
ACATGCTTATTAGAAGTGTATATACCCACACATCCTGTACAAATGGCCCCGATATTTATA
TTTTTTAAGACTAAGAGAGATGTGAGACACTAGTGCTCTATGCTGTGTGTTTTTAGGGAG
AGGCAGGTTCGACTGTAGTTGTTCTGTGAAAAATATTAACTAACCTGTTCTACTGGGAAA
TTTTGCTAGGAAGTCATTCTTACGTACTAAGCACAATTCAAGGCGAATGCAGGTGAGCTG
GCAGCTCCAGGACAAACAGAATTGTGAGAGAATACAGTAGCATGCTGCCCAAACATCTGC
CCCTGCTGATACAGCTTTGTGTGAGTGCTGGTTCCAGACTACAGCTCGGCTCATGAGTGG
TGGTGTTTCCTCCGGGATGATGGTACCTTCTCCAGGATGGTGGTACCTCCTCCAGTCATG
GCTTGCTGGGTGCTGCCTCCTATGCCCTGAATTGACATTGTGTGAGTGGGTTTTCTGCCA
TAGGATAATCCACTGAATCCCCACTCCCAAGTAGATGGTAGTCTGGCTTGTTCAGGTCGT
GTTTCAGCATGGGGAACCTTTGACTTCAATTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
TGTGTGTGTGTGTGTGTGTGTGTGTATTTGGGAGATTCATTTGAGGCCAAACATGATACT
TTGAATAAGACTTAAGATGTCTGATTGGCAAATGCTTCCTTGTCAGCGTACTGATGACGT
GTATGTCTGAGGAAGTAGGATATGCGTATTCCTGGTCTGTAGGTCCTTCAAGTCAATGTG
ACCATCATGGGCTTTTTATGGAAGGTGCCAGTGAAGTGGCCTCCCACCTACCTCTCGTAT
TCAGTAGAACAAAAAACCATGTGTTAGAGCCTCGCAAGGCCTGTGCCAGCTTCTGCCCAG
AATTGAGCTTTGGAGATACACACACACTGGCTGTTTTTCC..........

No.	Exon / Intron	Start	End	Start Phase	End Phase	Length	Sequence
	5' upstream sequence						..........GTCAGACACTTCTGGGCTTCATCCACATGAGCTGAGCAAGGGAAGAGCAA GCCATTGCACGGAATAATGGGTTGCGGAAAGTTCAAGAGATCATTTGACGGGACTGGATT TACCTTTGGCACAGATGCGGGATGGGGAGGGGGTAGGTGAAAAGGCAAAGACTGGAAGGA AATATCTGCGAAGGTAGAAAAAGGAAATTTGAGAACTGATTGGCTGTAGTTGCTGTCAGC GGGTGGATGTCGTTTTCTTCTCTCTCTTTTTGCTACAGGAAGTGATTTGCGGAGCTCACC GAGCCTTTGTTGAGAAGGGTCTCCTCAGAGTGAGTCACGCTTTTGCTGGGAGCAGCCCTG TGCAGCTGGCCGCTCGCTCCATCAGCCGCAACTATGACTTTTGCAAGGCAAGCGTTCCAC CCCAACCCTCGGTCTCCAGGGCCCGCGCTGCGTGGCTGCTGCTCTGCTGCCTTGTAACGG TGAAAAGGGCTCGGTCCTCGGCCTCGGCTGTCCCTCTCCGGAAAGGCTGTCCTGGGACTC GGGCTCCTCGTCCCGCTCGGGGGACCGCGGCTCGTGTGCTATGCGCGGCAGTCCGCGCCG GGGCCGGCAGCAGCAGCGCCCGGGTGGATGCGGCGAGCCCACGGAGGGGCATGCTTCCAC GCACCAAGTACAACCGCTTCAGGAATGACTCGGTGACATCGGTCGATGACCTTCTCCACA GCCTGTCGGTGAGCGGCAGCGGCGGCAAGGTCTCGGCGGAGCCCGCGGCGAGCCCCTACC TGGTGTCGGGCGAGGCGCTGCGCAAGGCGCCGGACGATGGGCCCGGCAGCCTGGGCCACC TGCTCCACAAGGTGTCCCACTTGAAACTCTCCAGCTCCGGCCTGCGTGGCCTGTCGTCGG CCGCCCGGGAGCGGGCAGGAGCGCGGCTCTCGGGCAGCTGCAGCGCGCCCAGCCTGGCGG CCCCGGACGGCGGCAGCGCGACCCCCGGGTCCCGCGCCCCGGCCGCCAGC
1	EXON 1	51,566,971	51,567,084	-	0	114	ATGAGTGCCACCAGGAAGAGCCGGGCCGGCGACGAGCCACTGCCCAGGCCCCCTCGGGGC GCGCCGCACACCAGCGATCAGGTGCTGGGGCCGGGAGTCACCTATGTGGTCAAG
	INTRON 1 - 2	51,516,596	51,566,970			50,375	GTGGGTAACCCGAGCACACTGCTGG..........CATGATCTATTTCTTCCCCTTACAG
2	EXON 2	51,516,525	51,516,595	0	2	71	TACTTGGGCTGCATCGAAGTTCTGCGCTCAATGAGGTCTCTTGACTTCAGTACGAGAACT CAGGTTACCAG
	INTRON 2 - 3	51,482,946	51,516,524			33,579	GTAAGCATTCTTCAAAGTGGATGCC..........AAAGTGAATTTCTCCCTGCCCTTAG
3	EXON 3	51,482,882	51,482,945	2	0	64	GGAAGCCATCAGCCGTGTCTGCGAAGCTGTGCCAGGTGCCAAAGGAGCCCTCAAGAAGAG AAAG
	INTRON 3 - 4	51,480,219	51,482,881			2,663	GTACGGTCACCCTCACTGTCACGTC..........AATCTCTCCCCCTTGGATTTCACAG
4	EXON 4	51,480,099	51,480,218	0	0	120	CCGCCGAGTAAGATGCTGTCCAGCATCCTGGGGAAGAGCAACCTCCAGTTCGCAGGGATG AGCATCTCCCTGACCATCTCCACCGCCAGCCTGAATCTGCGCACTCCTGACTCCAAACAG
	INTRON 4 - 5	51,472,857	51,480,098			7,242	GTGTGTGGCTGCCCAGGGTAGACAT..........AGTCTCCCTTTTTTTCTCCTGACAG
5	EXON 5	51,472,803	51,472,856	0	0	54	ATCATAGCGAACCATCATATGCGGTCTATCTCTTTCGCCTCAGGGGGAGACCCG
	INTRON 5 - 6	51,466,566	51,472,802			6,237	GTAAGTGGCCTTTGGTTTGTTTCTC..........TCTTTTTTTTTTCTTCCTTCCACAG
6	EXON 6	51,466,514	51,466,565	0	1	52	GACACAACGGACTATGTTGCCTATGTCGCTAAGGACCCTGTCAATCGCAGAG
	INTRON 6 - 7	51,461,445	51,466,513			5,069	GTGAGCAATGCCCGACCCATTTAAT..........GAGTTCATGTCCTCTTTTCTCCAAG
7	EXON 7	51,461,318	51,461,444	1	2	127	CTTGCCACATTCTGGAATGCTGTGACGGGCTAGCCCAAGATGTCATTGGCTCCATCGGAC AAGCCTTTGAACTCCGGTTCAAACAGTATTTGCAGTGCCCTTCCAAGGTTCCTGCCCTCC AGGACCG
	INTRON 7 - 8	51,451,641	51,461,317			9,677	GTGAGTAGCAGGGCCTGTCTTTCTC..........AAGGTCCCTGAAAATCTTTTAACAG
8	EXON 8	51,451,490	51,451,640	2	0	151	AATGCAGAGTCTGGATGAGCCATGGACTGAAGAAGAGGGAGATGGCCCTGATCACCCATA CTACAACAGCGTTCCCACCAAGATGCCTCCCCCAGGGGGGTTTCTGGATGCTCGATTGAA AGGCAGACCCCACGCTCCTGAGGCAGCCCAG
	INTRON 8 - 9	51,449,315	51,451,489			2,175	GTAAGTTGAGGGGTTCTCTTCCTGG..........TCTGAATATTGGTATGTGTCTCTAG
9	EXON 9	51,449,227	51,449,314	0	1	88	TTTGCAGGAAAAGAGCAAACTTATTACCAGGGAAGACACTTAGGAGATGCATTTGGTGAA GACTGGCAGCGAGCACCCACCAGGCAAG
	INTRON 9 - 10	51,448,049	51,449,226			1,178	GTAAGAGGCAAAGTGAAGGGGGTGG..........AACAGGACTCACTCTTTTGCTTCAG
10	EXON 10	51,447,890	51,448,048	1	1	159	GCTCCTTGGACATCTATAGCACAGCAGAAGGGAAAACTCACATGGTTCCTGTAGGAGAAA CACCAACCTATGTCAACACCCAGCCAGTCCCACCACAGGTGTGGCCAGCAGCAACCAGCA GCACTGAGAGCAGCCCACGGAAGGACCTCTTTGACATGA
	INTRON 10 - 11	51,442,986	51,447,889			4,904	GTAGGCATCCATCGCTTTTTCTGTA..........TGTCACTGTCATATGTTGTTGACAG
11	EXON 11	51,442,690	51,442,985	1	0	296	AGCCTTTTGAAGATGCCCTGAGAAACCAGCCCCTGGGCCCCATGTTGAGCAAAGCCGCGT CTGTGGAGTGCATCAGCCCGGTCACACCCAGAGCCCCGGATGCCAGGATGCTGGAGGAGC TTAACGCTGAGCCCTGGTACCAAGGAGAGATGAGCAGGAAGGAGGCAGAGGCCCTGCTAC GGGAAGATGGAGACTTCCTAGTGAGGAAGAGTACCACCAACCCCGGCTCCTTTGTCCTCA CGGGCATGCACAATGGGCAGGCCAAGCACCTGCTGCTGGTGGACCCGGAAGGCACG
	INTRON 11 - 12	51,431,282	51,442,689			11,408	GTGAGGCATGGGCAGGCACCTCCCA..........CCTCTCTTTCCTTTTGTCCTCACAG
12	EXON 12	51,431,041	51,431,281	0	-	241	ATCCGGACGAAGGACAGGGTCTTTGACAGCATCAGCCACCTCATCAATTACCACCTCGAG AGCAGCCTGCCCATTGTCTCTGCCGGGAGTGAGCTTTGTCTCCAGCAACCAGTGGAGAGG AAACCCTGAGCTTGCCCAGCGCCCCAGCCCCCATACCTTATGCCAGGTCAGGAAGACCTG GGCTCTGCTGCTCTCAGCCTATGGAAATGGGGCAACTGTCTGTGGGCCCATCACCATTAA A
	3' upstream sequence						AGCCCCCCCAGGGAGGTTTCCTTCAAGTTCAAATTTCATAAATATGTTCACACGATTCAG ACATGCTTATTAGAAGTGTATATACCCACACATCCTGTACAAATGGCCCCGATATTTATA TTTTTTAAGACTAAGAGAGATGTGAGACACTAGTGCTCTATGCTGTGTGTTTTTAGGGAG AGGCAGGTTCGACTGTAGTTGTTCTGTGAAAAATATTAACTAACCTGTTCTACTGGGAAA TTTTGCTAGGAAGTCATTCTTACGTACTAAGCACAATTCAAGGCGAATGCAGGTGAGCTG GCAGCTCCAGGACAAACAGAATTGTGAGAGAATACAGTAGCATGCTGCCCAAACATCTGC CCCTGCTGATACAGCTTTGTGTGAGTGCTGGTTCCAGACTACAGCTCGGCTCATGAGTGG TGGTGTTTCCTCCGGGATGATGGTACCTTCTCCAGGATGGTGGTACCTCCTCCAGTCATG GCTTGCTGGGTGCTGCCTCCTATGCCCTGAATTGACATTGTGTGAGTGGGTTTTCTGCCA TAGGATAATCCACTGAATCCCCACTCCCAAGTAGATGGTAGTCTGGCTTGTTCAGGTCGT GTTTCAGCATGGGGAACCTTTGACTTCAATTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG TGTGTGTGTGTGTGTGTGTGTGTGTATTTGGGAGATTCATTTGAGGCCAAACATGATACT TTGAATAAGACTTAAGATGTCTGATTGGCAAATGCTTCCTTGTCAGCGTACTGATGACGT GTATGTCTGAGGAAGTAGGATATGCGTATTCCTGGTCTGTAGGTCCTTCAAGTCAATGTG ACCATCATGGGCTTTTTATGGAAGGTGCCAGTGAAGTGGCCTCCCACCTACCTCTCGTAT TCAGTAGAACAAAAAACCATGTGTTAGAGCCTCGCAAGGCCTGTGCCAGCTTCTGCCCAG AATTGAGCTTTGGAGATACACACACACTGGCTGTTTTTCC..........

Sequence Detail Report

Gene Symbol (Gene ID)	Shc3 (ENSMUSG00000021448)
Transcript ID	ENSMUST00000021898

		SNP Information
Strain :
Sequence Retrieve :
Exon translate : CDS Start ( 1 ) - End ( 475 ) -
Strand :	forward reverse
Show sequence :	nucleotide amino acid
Color information