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Target CDS Information

Gene Symbol (Gene ID) Drd1 (ENSMUSG00000021478)
Cross Reference
CCDS CCDS26524.1
ChEMBL CHEMBL3071
EMBL AK044723, BC137641, BC137655, ...show all
Fantom A930036H24
GO GO:0001588, GO:0001588, GO:0001588, ...show all
goslim_goa GO:0000003, GO:0003013, GO:0003674, ...show all
MGI_trans_name Drd1-201
protein_id AAA16848.1, AAI37642.1, AAI37656.1, ...show all
Reactome R-MMU-162582, R-MMU-372790, R-MMU-373076, ...show all
RefSeq_mRNA NM_001291801.1, NM_010076.3
RefSeq_mRNA_predicted XM_006516848
RefSeq_peptide NP_001278730, NP_034206
UCSC uc011yzm.3
UniParc UPI00000E9862
Uniprot/SWISSPROT Q61616
Definition protein_id:ENSMUSP00000021932
translation:
MAPNTSTMDETGLPVERDFSFRILTACFLSLLILSTLLGNTLVCAAVIRFRHLRSKVTNF
FVISLAVSDLLVAVLVMPWKAVAEIAGFWPFGSFCNIWVAFDIMCSTASILNLCVISVDR
YWAISSPFQYERKMTPKAAFILISVAWTLSVLISFIPVQLSWHKAKPTWPLDGNFTSLED
AEDDNCDTRLSRTYAISSSLISFYIPVAIMIVTYTSIYRIAQKQIRRISALERAAVHAKN
CQTTTGNGNPVECSQSESSFKMSFKRETKVLKTLSVIMGVFVCCWLPFFISNCMVPFCGS
EETQPFCIDSITFDVFVWFGWANSSLNPIIYAFNADFQKAFSTLLGCYRLCPTTNNAIET
VSINNNGAVMFSSHHEPRGSISKDCNLVYLIPHAVGSSEDLKREEAGGIPKPLEKLSPAL
SVILDYDTDVSLEKIQPVTHSGQHST

Chromosome 13
Length
Position(start - end)
1,339
54,052,853 - 54,054,193
Orient to Chromosome minus
Link Location : (13:54052853-54054193)
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Detail Map


 

Report

Polymorphisms Report

Target Strain  MSMv4  JF1v3  KJRv1  SWNv1  CHDv1  NJLv1  BLG2v1  HMIv1  BFMv1  PGN2v1
Gene Symbol (Gene ID) Drd1 (ENSMUSG00000021478)
Transcript ID ENSMUST00000021932
Reports
substitution
cSNPs7
Insertion8
Deletion11
SNPs
+1kb
5'UTR
CDS
3'UTR
INTRON
-1kb
Insertions
+1kb
5'UTR
CDS
3'UTR
INTRON
-1kb
Deletions
+1kb
5'UTR
CDS
3'UTR
INTRON
-1kb
coding sequence substitutions
premature termination by the nucleotide substitution0
synonymous num6
non-synonymous num1
synonymous substitutions 54052877 (p.Thr439Thr), 54053489 (p.Ala235Ala), 54053843 (p.Ser117Ser), 54054005 (p.Ile63Ile), 54054119 (p.Thr25Thr), 54054161 (p.Thr11Thr),
non-synonymous substitutions 54053664 (p.Ser177Phe),
B6 transcript
(ENSMUST00000021932)
MAPNTSTMDETGLPVERDFSFRILTACFLSLLILSTLLGNTLVCAAVIRFRHLRSKVTNF
FVISLAVSDLLVAVLVMPWKAVAEIAGFWPFGSFCNIWVAFDIMCSTASILNLCVISVDR
YWAISSPFQYERKMTPKAAFILISVAWTLSVLISFIPVQLSWHKAKPTWPLDGNFTSLED
AEDDNCDTRLSRTYAISSSLISFYIPVAIMIVTYTSIYRIAQKQIRRISALERAAVHAKN
CQTTTGNGNPVECSQSESSFKMSFKRETKVLKTLSVIMGVFVCCWLPFFISNCMVPFCGS
EETQPFCIDSITFDVFVWFGWANSSLNPIIYAFNADFQKAFSTLLGCYRLCPTTNNAIET
VSINNNGAVMFSSHHEPRGSISKDCNLVYLIPHAVGSSEDLKREEAGGIPKPLEKLSPAL
SVILDYDTDVSLEKIQPVTHSGQHST*
MSMv4 transcript
MAPNTSTMDETGLPVERDFSFRILTACFLSLLILSTLLGNTLVCAAVIRFRHLRSKVTNF
FVISLAVSDLLVAVLVMPWKAVAEIAGFWPFGSFCNIWVAFDIMCSTASILNLCVISVDR
YWAISSPFQYERKMTPKAAFILISVAWTLSVLISFIPVQLSWHKAKPTWPLDGNFTFLED
AEDDNCDTRLSRTYAISSSLISFYIPVAIMIVTYTSIYRIAQKQIRRISALERAAVHAKN
CQTTTGNGNPVECSQSESSFKMSFKRETKVLKTLSVIMGVFVCCWLPFFISNCMVPFCGS
EETQPFCIDSITFDVFVWFGWANSSLNPIIYAFNADFQKAFSTLLGCYRLCPTTNNAIET
VSINNNGAVMFSSHHEPRGSISKDCNLVYLIPHAVGSSEDLKREEAGGIPKPLEKLSPAL
SVILDYDTDVSLEKIQPVTHSGQHST*
homology99.78 (447 / 447)

Exon Detail Report

Target Strain  MSMv4  JF1v3  KJRv1  SWNv1  CHDv1  NJLv1  BLG2v1  HMIv1  BFMv1  PGN2v1
Gene Symbol (Gene ID) Drd1 (ENSMUSG00000021478)
Transcript ID ENSMUST00000021932
No. Exon / Intron Start End Start Phase End Phase Length Sequence
5' upstream sequence
..........AAATTCGGGCATTCAGTGTGGTGTGTGGTTCTCATGGAGACAAGACTACT
ACCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAACTGGTCTCTGAAGAATTTCTGGCCA
CCAAGGACTGACTGAGTCCATATCTGGTCCCAACTCTTAAATAAGTATTTCATTTAATTT
TTACATCAGTAAGCACAGGAGTCCAGGCAAAGTGATTTCCAAGTTCCATACTTAATCTCT
TTTCACACAGATGGGAAGGCACTCTGGGGCTGCGTCTATGCACTAAACGTCTCTGAGGCC
ACACATTCCTGTCTCTGCTTTATCCCAGTGGTAATTGTTTAGATAGTGGGTTCCATCCTA
GACACGGCTGTGCAAGCGACAGTTAGGCAGACAGGCCACCATCTTCATTAGCTACTGTGT
TAACGTGGAGTAGAGCCCACAGTCTTTCTGAGCATCACTGTCCACACAGATGAAATGAAG
CTGTGCAAGCCAATAAGGAAGGAGTTTTGCAAGATGTCGAACATCATGAGGTGTGTGTGT
GTGTGTGTGTGTGTGTGTGTGTTTAGGGGACACAGAGGCTGCTGAGTTTATGCCAGGTCT
CTGATCACTTGCACAATAAGTTGACATGTTGTTCTCACTGCTGCTCCAGCCTTGGCACAC
AGGGGACACAAAAGGAAAATCATGGCTTAGAGAATAAAATGCTAGCCAAAGGGACTTCTT
ATTCTTGTGAGTTTTTAGGGGCATTTCAAACGAGGGAGGCTAGAGCGCGGAAGACCTGCC
TCTCACCGTCCGGATTCTGGCAGAAGGGGACAGGGAAAAGCATGGTCGAGGCCCTGCATC
TTGGTTACACACACTGGCTGAGGCCCCTGTGATCTGAACCTGCTAGGGCGCAGGCGGGGT
GTAGGAAACCAGAGGCCCCGGCAGAGGGCGCCGGGTACCTGCTGAGAGTGCGGCACCGTG
TTTGGGGTGCTTGTGGGGCGCGGGTCACGGGCTGCACTCGTGAGTTGACC
1 EXON 1 54,055,561 54,055,658 - - 98
GCAGAAGCGCCTTGGCGGGCGGAGCGCGGAGAGCAGAGCGAGCGGCACAGGAGAGGGCGC
AGGGTTGGCGGAGTCGGGGAGCGTGGTCTCCCAGATCG
INTRON 1 - 2 54,054,614 54,055,560 947
GTGAGCACTCTCGTCCTGGGGCTTC..........CTTTGTGTTTCCCTTTGCTTTTTAG
2 EXON 2 54,051,186 54,054,613 - - 3,428
GGCATTTGGAGAGATGTGGCACCAGGGGCTTGAAGGAGAAATGCATGTATTTTAGGCTGT
GTCTCAGAAGAAGAGGCAGCATCCCTGAAAAGTGACTGAAATTGACCAGGAAGAGGCCCC
AGACTCTTAGAGTATGCTTAAAAGCCTATGCATTCCTTGGGGAATCTAGGGACCAGCCGA
TGCCAGGGAACAGCGACCTGGAGCACTGAACCCAGAAGACAGGTGGAAAGCAAGCGGCTC
TTCTTCCTGGTATGGCTTGGATTGCTACGGAGATGCTCCTGATGGAACACCATTGTGCTT
TTGTCCAGACAGCAACTGGGGCTGGAGAAGGGGCTGGGTGGTGAGTGATTGGGGGAAGTC
TGGCTAAGCCTGGTCAAGAACGTGAGGGCTAAGCCACCGGAAGTGCTTTCCTTCTGGAAG
ATGGCTCCTAACACTTCTACCATGGATGAGACCGGCCTGCCAGTGGAGAGGGACTTCTCC
TTTCGCATCCTCACGGCCTGTTTTCTGTCCCTGCTTATCCTGTCCACTCTCTTAGGGAAT
ACCCTTGTCTGTGCCGCTGTCATCAGGTTTCGACACCTGCGGTCCAAGGTGACCAACTTC
TTTGTCATTTCTTTAGCTGTGTCAGATCTCTTGGTGGCTGTCTTGGTCATGCCCTGGAAA
GCTGTGGCTGAGATTGCTGGCTTTTGGCCCTTTGGGTCCTTTTGTAACATTTGGGTAGCC
TTTGACATCATGTGCTCCACGGCATCCATCCTTAACCTCTGTGTGATCAGTGTGGACAGG
TATTGGGCTATCTCCAGCCCTTTCCAGTATGAGAGGAAGATGACTCCGAAGGCAGCCTTC
ATCCTGATTAGCGTAGCATGGACTTTGTCTGTTCTCATATCCTTCATTCCAGTGCAGCTA
AGCTGGCACAAGGCAAAACCTACATGGCCCTTGGATGGCAATTTTACTTTCCTGGAAGAT
GCCGAGGATGACAACTGTGACACGAGGTTGAGCAGGACATACGCCATTTCATCCTCCCTC
ATAAGCTTTTACATCCCCGTAGCCATTATGATCGTCACTTACACCAGTATCTACAGGATT
GCCCAGAAGCAAATCCGGCGCATCTCAGCTTTGGAGAGGGCAGCGGTCCATGCCAAGAAC
TGCCAGACCACCACAGGTAATGGAAACCCTGTCGAATGCTCTCAATCAGAAAGTTCCTTT
AAGATGTCCTTTAAGAGGGAGACTAAAGTCCTGAAGACACTGTCTGTGATCATGGGGGTA
TTCGTGTGCTGCTGGCTCCCTTTCTTCATTTCGAACTGTATGGTGCCCTTCTGTGGCTCT
GAGGAGACCCAGCCATTCTGCATTGATTCCATCACCTTCGATGTATTTGTGTGGTTTGGC
TGGGCGAATTCCTCCCTGAACCCCATTATTTATGCTTTTAATGCCGATTTTCAGAAGGCA
TTCTCGACCCTCTTAGGATGCTATAGACTCTGCCCTACAACGAATAATGCCATAGAGACT
GTAAGCATCAACAACAACGGGGCTGTGATGTTTTCCAGCCACCATGAGCCCCGAGGCTCC
ATCTCCAAGGACTGTAATCTGGTTTACCTGATCCCTCATGCTGTGGGCTCCTCTGAGGAC
CTGAAGAGGGAGGAGGCCGGTGGCATACCTAAGCCACTGGAGAAGCTGTCCCCGGCCTTA
TCGGTCATATTGGACTATGACACCGATGTCTCTCTAGAAAAGATCCAACCCGTTACACAC
AGCGGACAGCATTCAACCTGAATATTGGGTTCTCATCTCTGAAGCTATGAGTTCCCTAGG
GCTTGCTGTTAAGAAATTAACACGAGACCCCTCTGCTGCTTTTGGACAGTTACAGAGCTT
CTCCAACTCACTGACTCCAGTGTATTCTCTAGCCACAAGGGAAATGACTTAGGCTCTGAA
ATCCTTTTTGAAGCATTATCTTAGGACACTCTATATATATATATTTAAAAAAATAATAGG
GCCAAAAGTCAACTGTAAACAGCTTCACTTAAAAATCAAACTTTCCAGGAAGGAAGTGTG
AGAGTTGTTTGCTGTATCCAAACAGGTGCTAAAACTGTCCAAGCAGTTTTCAGATTGTAA
AGGTAGGTGCATGCCTTTGTTAATTAACTTCTCTGACAATAATTGAGCCTTACAGCAAGA
GTGGGATTTCTTTTTTTTTTTTCTTTCTCAGAATTGACAGATGCATTGTTGATAACGGTT
TTATTTATTTATTTATTTATTTATTTATTTATTTATTGTATTATATGGATATTTTAAATT
TATCATAGTGAACCTATATTTAGCTTATTTAATAGACCGAACCAATGTTAAATCAGAGAC
TGAACTGTCCATTGTACTAGCACTTCATGAGCCAATGAAACAGTACACATAGACTCTGAG
ATTCTGAGCTGGGAATGACTTCTGGGAAGGCAGCAAAGGCTGATGTGGTGGTTCCTTAAC
TCAACACAGACACAAATAAACACAAGGTAAGAAGTGACTAACACTACCAATGCTCTGCCC
CTAAAAATATTTTGGAAAGATATGTTTTTTAAAAAAGAAGCTACTATTGTGTTCTGAATG
TTTTAAATGGCAGAGGCTTTCCCCGAGGCAAATTTGCACTTCTGTAAATATCTCTGTAAA
AGCCAGCTCAAGAAGAAATCCAACTTTAGATTTCTGTCTGAATGTCGAGGAAGAGCATAT
GCCACTTTGTATTTATGTAAAATAATTGGCCCTCCCTGTCATTTCTCATTTCATGCTTGA
AATGGCTTTCTGAAACAAACAAATGACTGTCCAGGATTAAGATGTGCATCGAGGTGAATG
AGCTGTAAAGTCACAGGTCACAGCAGCCCCTCCGATAGTTGGGCTCATCGCTGGCTCTTC
ATCTGCCCAGGTCTAACCAAGCCGGCTGCTCAAGGGGCTACTTTTTTAGTGCTTTAATCC
GAATTTAGTATCCTCTCTTAAAAAAAAAAAAAAAAGCTCTTTAATGTTAGTGGTAAACTA
GCTAATGAGCGGTGCCTCATCGTGGAAGTATACACTTCTGTTGTTGGTGGGGGGAATAGA
AGAACCCCTTCCCGGTGTGTGTTGAGCATCACAAAGCCATCAGCATCACTAGTCACAAAT
GCTACTTTTTTTCCTCCCTGTGGTTTTGAATCTAGTTTCCAAGTCATAGCCTGGACTGCA
AAAAGTACCATCAAGTCCCCTCGGGTGGGGGCATTGCAACAGTGTTTCTTTTGTTGTTTG
AAATGTTTACAAGGTGTTCTTTGGAAGCAGCTGCAACATGTGGATAGAACTGAAGGAAAG
GCTGACTGGCTTGCTAACAGTATCCCCTGCAGGGCTCTGTGTTACGTACTTTGAATGTTT
TCTCAGCTCTACCGCTTGTATGCTTTCTTACATAAAATAAAATTATTTTGTGAATTCAAA
TCAACCCC
3' upstream sequence
AAATGGAGCTCTGTTGCATTTGTTAAACCCATTTTAAAAGCTAGACTGCTTCAGGTAGAC
AGCTAAGAAAATGGGGAGAGCATCTTCGGATATTCACTCCTCTTTTAAGACAGGGATTTC
TCTCCTATGTGCCCTTGGTTGCGTTTGAATGTTTATGTGGAAAACATTGCCACACATGTT
TCTTATATTTTAACTGTGCTCTAAGAAGAAACCTTTGTTCACTTGAAAAATTACTCTGCT
TCTCTCTCTGTTTTTCAGATTTGAAGATGTTCTCATTTTTAGCTCTTTCTTTTTAAGAGA
TTATTTGTAAATGGAATAAAAATTTTAGAAAGGACTGTCTTGCTCTGAGTGGCTGTAGTT
TTGTAGTTGAGGGCAACCACCATGCATGCTAGTGACGCTTATTTTAAAACAACTTAGAAA
TGATCTATTCTAAAGAAAACATGGCTTGTGACACTGGGAACACTGTAACGATTAGCAGGA
CCACTCTCTGATTCTGCCAGTGCTACTTGCCAGCTAACCCAAGGAAGGGAAAGGGCTCAG
CTGCTGGTGATGTAGAAATTAAGGGTTAAGTTTATAGTCTGGAGCATTACACAGCAGATG
GCATCTCTTTAGAGTCCCACTTGCATCTCCCAGGCCCTGGCATTCAGCGAACACATCTGG
AGTGAGCTCTAGGAAAAACCCTGTGCCTTTTCTTCAAATCTCATGACTTCTGGATGCCTT
GCTCCTGGAGGCTCAACGTTAGGTTCAACTCAGAAGCTCAGACAGCCACAGGCTACAGTG
CTCAGGCAAGGCTGTCACTGTGTAGTCAATGAAACCTGACATAGGAGTGTCCCTTCAATA
GTGCATTTAGAAGTGATTTTGAATAATTATAACCTTGAACAAGATTGTGCTCTGGGTTTC
TCTGATTCTGGATCGACTTAGGCCATCTAAAGAACGCTAATTCTGAGAAGTATAAAAGCA
AACTTGTGGTAAGACTGATATTTCATTTTTTAACTCCAGT..........

Sequence Detail Report

Gene Symbol (Gene ID) Drd1 (ENSMUSG00000021478)
Transcript ID ENSMUST00000021932
SNP Information
Strain :
Sequence Retrieve :
Exon translate :
CDS Start ( 1 ) - End ( 447 )
-
Strand : forward reverse
Show sequence : nucleotide amino acid
Color information