MoG+ -Mouse Genome database with high added value-

Target CDS Information

Gene Symbol (Gene ID)

Txndc15 (ENSMUSG00000021497)

Cross Reference

CCDS	CCDS26553.1
EMBL	AK079517, AK160051, AK167701, ...show all
Fantom	A130096A21, I420045J23, I530028O22, ...show all
GO	GO:0003674, GO:0005575, GO:0005623, ...show all
goslim_goa	GO:0003674, GO:0005575, GO:0005623, ...show all
MGI_trans_name	Txndc15-201
protein_id	AAH29015.1, AAH62180.1, AAH94275.1, ...show all
RefSeq_mRNA	NM_175150.3
RefSeq_peptide	NP_780359
UCSC	uc007qry.2

UniParc	UPI00001E8363
Uniprot/SWISSPROT	Q6P6J9

Definition

protein_id:ENSMUSP00000021959
translation:

MQLLCWWQVLLWVLGLPAHGLEVAEDSGHPWREERPVPALQVGAVYLHEEEVAQDHRDQA
RAAEPMEASLGPRGDPMVVLSVVPGAAEDQRSPEAHDGTCSAQGEEDPSCGRENLFGLQG
AGGFQDREEEYYAEPGVTEAEPVATEDANSTDSLKSPKVNCEERNVTGLENFTLKILNMS
QDLMDFLNPNGSDCTLVLFYTPWCRFSASLAPHFNSLPRAFPTLGFLALDASQHSSLSTR
FGTVAVPNILLFQGAKPMARFNHTDRTLETLKIFIFNQTGIEAKKNVVVTQADQMGPLPS
TLIKTVDWLLVFSLFFLISFIMYATIRTESIRWLIPGQEQEHAE

Chromosome

Length
Position(start - end)

11,084
55,714,778 - 55,725,863

Orient to Chromosome

plus

Link

Location : (13:55714778-55725863)
/

Detail Map

name	Txndc15 (ENSMUSG00000021497)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : Txndc15 note : thioredoxin domain containing 15 [Source:MGI Symbol;Acc:MGI:1916922]

name	Pcbd2 (ENSMUSG00000021496)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : Pcbd2 note : pterin 4 alpha carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 2 [Source:MGI Symbol;Acc:MGI:1919812]

name	Txndc15 (ENSMUSG00000021497)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000021959

name	Pcbd2 (ENSMUSG00000021496)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000124968

name	Pcbd2 (ENSMUSG00000021496)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000021958

name	Txndc15 (ENSMUSG00000021497) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS26553.1 Uniprot/SWISSPROT:Q6P6J9 RefSeq_peptide:NP_780359 RefSeq_mRNA:NM_175150.3 UCSC:uc007qry.2 Fantom:A130096A21 Fantom:I420045J23 Fantom:I530028O22 Fantom:I730032C10 Fantom:I730044J03 EMBL:AK079517 EMBL:AK160051 EMBL:AK167701 EMBL:AK167838 EMBL:AK167977 EMBL:BC029015 EMBL:BC062180 EMBL:BC094275 GO:GO:0003674 GO:GO:0005575 GO:GO:0005623 GO:GO:0008150 GO:GO:0016021 GO:GO:0045454 MGI_trans_name:Txndc15-201 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005623 goslim_goa:GO:0008150 goslim_goa:GO:0042592 protein_id:AAH29015.1 protein_id:AAH62180.1 protein_id:AAH94275.1 protein_id:BAC37669.1 protein_id:BAE35591.1 protein_id:BAE39745.1 protein_id:BAE39859.1 protein_id:BAE39969.1 UniParc:UPI00001E8363
definition	note : transcript_id=ENSMUST00000021959 protein_id : ENSMUSP00000021959 translation : MQLLCWWQVLLWVLGLPAHGLEVAEDSGHPWREERPVPALQVGAVYLHEEEVAQDHRDQARAAEPMEASLGPRGDPMVVLSVVPGAAEDQRSPEAHDGTCSAQGEEDPSCGRENLFGLQGAGGFQDREEEYYAEPGVTEAEPVATEDANSTDSLKSPKVNCEERNVTGLENFTLKILNMSQDLMDFLNPNGSDCTLVLFYTPWCRFSASLAPHFNSLPRAFPTLGFLALDASQHSSLSTRFGTVAVPNILLFQGAKPMARFNHTDRTLETLKIFIFNQTGIEAKKNVVVTQADQMGPLPSTLIKTVDWLLVFSLFFLISFIMYATIRTESIRWLIPGQEQEHAE

name	Pcbd2 (ENSMUSG00000021496) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000084272 Vega_transcript:Pcbd2-001 UCSC:uc007qrz.1 MGI_trans_name:Pcbd2-001 Vega_translation:214588 Vega_translation:OTTMUSP00000045399 OTTP:OTTMUSP00000045399 OTTT:OTTMUST00000084272 UniParc:UPI0000001A57
definition	note : transcript_id=ENSMUST00000124968 protein_id : ENSMUSP00000115392 translation : MSSDAQWLTAEERDQLIPGLKAAGWSELSERDAIYKEFSFKNFNQAFGFMSRVALQAEKMNHHPEWFNVYNKVQITLTSHDCGGLTKRDVKLAQFIEKAAASL

name	Pcbd2 (ENSMUSG00000021496) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS26554.1 Uniprot/SWISSPROT:Q9CZL5 RefSeq_peptide:NP_082557 RefSeq_mRNA:NM_028281.1 UCSC:uc007qrz.1 Fantom:2700061N24 EMBL:AK012465 EMBL:BC028642 GO:GO:0004505 GO:GO:0005515 GO:GO:0005515 GO:GO:0005634 GO:GO:0005739 GO:GO:0006729 GO:GO:0008124 GO:GO:0045893 GO:GO:0045893 GO:GO:0051289 GO:GO:0051291 GO:GO:0055114 MGI_trans_name:Pcbd2-201 PDB:1RU0 PDB:4WIL goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005737 goslim_goa:GO:0005739 goslim_goa:GO:0006461 goslim_goa:GO:0008150 goslim_goa:GO:0009058 goslim_goa:GO:0016491 goslim_goa:GO:0016829 goslim_goa:GO:0022607 goslim_goa:GO:0034641 goslim_goa:GO:0043226 goslim_goa:GO:0051186 goslim_goa:GO:0065003 protein_id:AAH28642.1 protein_id:BAB28260.1 UniParc:UPI0000441F05
definition	note : transcript_id=ENSMUST00000021958 protein_id : ENSMUSP00000021958 translation : MVAAAAVAVAAVGARSAGRWLAALRSPGASRAAMSSDAQWLTAEERDQLIPGLKAAGWSELSERDAIYKEFSFKNFNQAFGFMSRVALQAEKMNHHPEWFNVYNKVQITLTSHDCGGLTKRDVKLAQFIEKAAASL

name
type	STS
link
xref	UniSTS_NUM:164528 UniSTS:AI854086 WI_MRC-RH:675063
definition	note : map_weight=1 standard_name : AI854086

name
type	misc_feature
link
xref
definition	note : contig AC126408.6 35333..238967(1)

Polymorphisms Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Txndc15 (ENSMUSG00000021497)
Transcript ID	ENSMUST00000021959

Reports
substitution
cSNPs	8
Insertion	7
Deletion	20
SNPs	-1kb 55709908(c.-4870T>C), 55710169(c.-4609C>T), 55710250(c.-4528T>C), 55710297(c.-4481T>C), 55710326(c.-4452T>C), 55710334(c.-4444A>G), 55710419(c.-4359G>A), 55710612(c.-4166G>A), 55710634(c.-4144A>G), 55710737(c.-4041T>G), 55711018(c.-3760T>C), 55711060(c.-3718T>C), 55711142(c.-3636A>G), 55711342(c.-3436G>A), 55711460(c.-3318T>G), 55711505(c.-3273C>T), 55711563(c.-3215T>A), 55711607(c.-3171C>A), 55711775(c.-3003C>T), 55711844(c.-2934T>G), 55711870(c.-2908C>T), 55711890(c.-2888C>T), 55712082(c.-2696T>C), 55712110(c.-2668T>C), 55712145(c.-2633G>A), 55712162(c.-2616A>T), 55712427(c.-2351T>C), 55712451(c.-2327G>A), 55712452(c.-2326G>A), 55712462(c.-2316G>A), 55712511(c.-2267C>T), 55712542(c.-2236A>T), 55712547(c.-2231C>G), 55712600(c.-2178T>C), 55712632(c.-2146A>T), 55712634(c.-2144T>A), 55712635(c.-2143A>T), 55712840(c.-1938T>C), 55712898(c.-1880C>T), 55712907(c.-1871C>T), 55713014(c.-1764G>A), 55713026(c.-1752A>T), 55713185(c.-1593G>A), 55713236(c.-1542T>G), 55713247(c.-1531C>T), 55713283(c.-1495A>G), 55713324(c.-1454C>G), 55713539(c.-1239T>C), 55713606(c.-1172A>T), 55713622(c.-1156T>C), 55713856(c.-922A>G), 55714278(c.-500A>T), 5'UTR CDS 55718091(c.367G>A), 55718192(c.468C>T), 55721648(c.613C>A), 55724577(c.777A>G), 55724601(c.801C>T), 55724637(c.837G>A), 55725707(c.879C>T), 55725845(c.1017A>G), 3'UTR 55725887(c.24A>C), 55726152(c.289A>G), 55726184(c.321A>G), 55726192(c.329T>C), INTRON 55714983(c.67+139G>A), 55715025(c.67+181A>T), 55715026(c.67+182A>C), 55715116(c.67+272C>G), 55715132(c.67+288T>A), 55715172(c.67+328T>C), 55715209(c.67+365A>G), 55715451(c.67+607A>T), 55715540(c.67+696A>G), 55715636(c.67+792A>G), 55715668(c.67+824C>G), 55715859(c.67+1015A>G), 55715889(c.67+1045T>A), 55716454(c.68-1338C>T), 55716458(c.68-1334G>A), 55716778(c.68-1014T>A), 55717196(c.68-596G>A), 55717606(c.68-186G>A), 55718843(c.543+576G>C), 55719251(c.543+984G>A), 55719253(c.543+986T>C), 55719639(c.543+1372C>T), 55719653(c.543+1386G>A), 55720010(c.544-1569C>T), 55720047(c.544-1532T>C), 55720215(c.544-1364T>C), 55720289(c.544-1290G>A), 55720608(c.544-971T>C), 55720782(c.544-797T>C), 55720930(c.544-649G>A), 55721008(c.544-571A>C), 55721016(c.544-563T>C), 55721033(c.544-546T>C), 55721180(c.544-399C>T), 55721216(c.544-363G>A), 55721329(c.544-250T>C), 55721343(c.544-236C>T), 55721381(c.544-198G>A), 55721450(c.544-129G>T), 55721486(c.544-93G>C), 55721772(c.707+30G>C), 55721835(c.707+93A>G), 55721917(c.707+175T>C), 55721975(c.707+233G>A), 55723149(c.708-1359T>G), 55723159(c.708-1349G>C), 55723305(c.708-1203T>C), 55723473(c.708-1035G>A), 55723515(c.708-993G>A), 55723560(c.708-948G>A), 55723603(c.708-905C>T), 55723685(c.708-823G>A), 55723795(c.708-713T>C), 55723822(c.708-686T>C), 55723861(c.708-647G>A), 55723882(c.708-626A>C), 55723927(c.708-581G>A), 55723965(c.708-543C>G), 55723974(c.708-534T>C), 55724003(c.708-505A>G), 55724009(c.708-499A>G), 55724069(c.708-439C>T), 55724089(c.708-419A>G), 55724342(c.708-166G>A), 55724391(c.708-117T>C), 55724447(c.708-61A>C), 55724464(c.708-44T>A), 55724492(c.708-16C>T), 55724643(c.838+5G>A), 55724658(c.838+20G>A), 55724754(c.838+116T>C), 55724755(c.838+117G>A), 55724778(c.838+140C>T), 55724788(c.838+150C>T), 55725154(c.839-513A>G), 55725290(c.839-377G>A), +1kb 55726374(c.511A>T), 55726596(c.733C>T), 55726981(c.1118A>T), 55727148(c.1285A>G), 55727190(c.1327C>T), 55727207(c.1344T>C), 55727240(c.1377A>T), 55727286(c.1423A>C), 55727452(c.1589C>G), 55727522(c.1659G>T), 55727575(c.1712G>T), 55727597(c.1734C>T), 55727691(c.1828T>A), 55727698(c.1835C>G), 55727772(c.1909A>G), 55727879(c.2016G>A), 55727897(c.2034T>C), 55728057(c.2194C>T), 55728064(c.2201A>G), 55728713(c.2850A>T), 55728808(c.2945T>C), 55728856(c.2993C>G), 55728857(c.2994C>T), 55728885(c.3022T>C), 55729033(c.3170G>T), 55729525(c.3662G>C), 55729574(c.3711T>A), 55729678(c.3815C>T), 55729898(c.4035C>T), 55729971(c.4108A>G), 55730064(c.4201A>G), 55730167(c.4304C>T), 55730263(c.4400A>G), 55730317(c.4454A>C), 55730337(c.4474T>G), 55730383(c.4520G>T), 55730554(c.4691G>A), 55730557(c.4694C>T), 55730734(c.*4871C>T),
Insertions	-1kb 55713305 (c.-1473_-1472insTT), 5'UTR CDS 3'UTR INTRON 55715193 (c.67+349_67+350insAA), +1kb 55728274 (c.2411dupT), 55730043 (c.4180dupC), 55730388 (c.4525_4526insTGTT), 55730529 (c.4666_4667insCCGACG), 55730670 (c.4807_4808insCT),
Deletions	-1kb 55711373 (c.-3404_-3397delACAAACAA), 55711406 (c.-3371delA), 55711412 (c.-3365delA), 55711758 (c.-3019delA), 55713977 (c.-800_-798delATT), 5'UTR CDS 3'UTR INTRON 55715081 (c.67+238_67+240delTCC), 55715509 (c.67+667_67+668delAT), 55715707 (c.67+864_67+865delAA), 55716047 (c.67+1222_67+1229delAAAAAAAA), 55718595 (c.543+337delT), 55719351 (c.543+1085delT), 55721126 (c.544-452_544-450delTAA), 55723015 (c.707+1274delA), +1kb 55727992 (c.2130_2135delGAGGCT), 55728354 (c.2492delT), 55728360 (c.2498delT), 55729009 (c.3147_3154delTCTCTCTC), 55729368 (c.3506delA), 55730099 (c.4237_4245delCTTTGGATC), 55730666 (c.4804_*4806delCTT),
coding sequence substitutions
premature termination by the nucleotide substitution	0
synonymous num	7
non-synonymous num	1
synonymous substitutions	55718192 (p.Ser156Ser), 55721648 (p.Arg205Arg), 55724577 (p.Ala259Ala), 55724601 (p.Thr267Thr), 55724637 (p.Thr279Thr), 55725707 (p.Asp293Asp), 55725845 (p.Glu339Glu),
non-synonymous substitutions	55718091 (p.Gly123Ser),
B6 transcript (ENSMUST00000021959)	MQLLCWWQVLLWVLGLPAHGLEVAEDSGHPWREERPVPALQVGAVYLHEEEVAQDHRDQA RAAEPMEASLGPRGDPMVVLSVVPGAAEDQRSPEAHDGTCSAQGEEDPSCGRENLFGLQG AGGFQDREEEYYAEPGVTEAEPVATEDANSTDSLKSPKVNCEERNVTGLENFTLKILNMS QDLMDFLNPNGSDCTLVLFYTPWCRFSASLAPHFNSLPRAFPTLGFLALDASQHSSLSTR FGTVAVPNILLFQGAKPMARFNHTDRTLETLKIFIFNQTGIEAKKNVVVTQADQMGPLPS TLIKTVDWLLVFSLFFLISFIMYATIRTESIRWLIPGQEQEHAE*
MSMv4 transcript	MQLLCWWQVLLWVLGLPAHGLEVAEDSGHPWREERPVPALQVGAVYLHEEEVAQDHRDQA RAAEPMEASLGPRGDPMVVLSVVPGAAEDQRSPEAHDGTCSAQGEEDPSCGRENLFGLQG AGSFQDREEEYYAEPGVTEAEPVATEDANSTDSLKSPKVNCEERNVTGLENFTLKILNMS QDLMDFLNPNGSDCTLVLFYTPWCRFSASLAPHFNSLPRAFPTLGFLALDASQHSSLSTR FGTVAVPNILLFQGAKPMARFNHTDRTLETLKIFIFNQTGIEAKKNVVVTQADQMGPLPS TLIKTVDWLLVFSLFFLISFIMYATIRTESIRWLIPGQEQEHAE*
homology	99.71 (345 / 345)

Exon Detail Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Txndc15 (ENSMUSG00000021497)
Transcript ID	ENSMUST00000021959


..........ACAGTGGACTAGTACCCAGCTACTAAGTTACTAAGTATTACAGCGTCTTG
ACTCAGATTGCCAAGACCTTTGGTTCATAACCCTTGGCCTTCTTCGAGAGCAGTATGTAC
TCTTAATCTCAAAGTTATCTTCCCCTCTCCCCTCCCCCTTTCTGCTCTCATCTCTTCAAC
TCCCTTCCCCTCCACTCTTTTCTCCTTCCTTTTCCCGCCTCTCATTTTTGAGACAAGGTC
TCATTCTGAAGCCCAGGCCAGTTCTGGAATTCATGATGTAGCCCAGACTGGCTTGGAACC
CACAGTAATTCTCCTGCCAGAAGAGGGCATCAGATCTCATTATGGATGGTTGTGAGCCAC
CATGTGGTTGCTGGGATTTGAATTCAGGACCTCTTGAAGAGCAGTCATTGCTCTTAACTG
CTGAGCCATCTCTCCAGCCCCCCTAAGTGTCATTATCTTAGGAGTCCCAGTGTTAAAACC
AACCAACCAATTTGCCAGAAGTAGCAAATTATAGGATAGACAGTTACATACACACATACA
GCAGTTATGCGAAGTTCAAATTTTTTTTTTTTTTTTAAAACTTCAGTCTTCGGACCTTCG
GAAGAGCAGTCGGGTGCTCTTACCCACTGAGCCATCTCTCCAGCCCGCGAAGTTCAAATT
TAACTGGATCTATCCTCTGTCTGGCAACACAAGCTAGTGCAACATGCTGAAGTAATACAT
CAGACTATCTGTGATTTCCCAAGGTTCTGTCCCTCCTCCATTGTGCACAAGTTTCTTGGC
CTTTTTGTCTCTTGAAATGAAAGGTATTAACTCCGCACACAGGTTCAGTACGTGTCGCAA
GCAGCGAGGAGTTCTCATGGGAATGGCTATTGATGGCTGCTCGAATCCTACTTTGATACT
TGTTCCCCAAAAGCGGCTTCCAGTACAGGTCGCACAGGCCTGGCTAGAGGCCGACCGCCC
GACTCCAAGATGGCGTCTGCAGCGTCGGCCAGGAGTCAAGATGGCGGCCC
GCGGCCACGCCTGCGCTCTGGGCTCTCCTCCCCGTAGTCTCCCTGGGGCGGGGGGTGCGACTCCGGTTGCCGGTGCGCCGATTTTCTTCCACCGCGGTGGCTGTCGCCGCGGCTCCCTGTCGCGCGCCATGCAACTCCTCTGCTGGTGGCAAGTCCTGCTGTGGGTGCTGGGCCTTCCGGCCCACGGCCTGGAGG
GTGAGTGCGGATCGGGGTCCGGCGA..........GTGACAGTATGCTGCCCTGCTTTAG
TTGCAGAGGACAGTGGTCACCCCTGGCGGGAGGAGCGGCCTGTCCCTGCTCTCCAGGTAGGAGCTGTGTATCTGCATGAAGAGGAGGTTGCTCAGGACCATCGGGACCAGGCAAGAGCGGCGGAACCCATGGAGGCCTCTCTGGGTCCGCGCGGAGATCCCATGGTGGTGCTGTCAGTGGTCCCTGGGGCAGCTGAGGACCAACGGAGCCCCGAGGCCCACGATGGCACCTGCAGTGCGCAGGGAGAGGAGGACCCGAGCTGTGGCCGAGAGAACCTCTTCGGGCTGCAGGGGGCAGGCAGCTTCCAGGATCGGGAAGAGGAGTACTATGCTGAGCCTGGCGTGACTGAGGCCGAGCCTGTAGCCACCGAGGATGCCAACAGCACTGACAGCCTCAAGTCTCCCAAGGTGAATTGTGAGGAGAGGAATGTGACTGGGCTAGAAAACTTCACTCTGAAGATTTTAAATATGTCCCAG
GTAGGAAGCACGTGTTAATGTCTGT..........TTAACTATTGTGCTTTTCTTTGTAG
GACCTCATGGATTTCCTAAACCCAAATGGTAGTGACTGTACACTGGTCCTCTTCTACACCCCGTGGTGCAGGTTTTCTGCCAGCCTGGCTCCTCATTTTAACTCCCTGCCCCGGGCGTTTCCAACACTTGGCTTCTTGGCTCTGGATGCATCTCAGCACAGCAG
GTATCCTTGGCAGACTGTGGCTTGT..........CTTAACTGCTTTCTTTGTCTTACAG
CCTTTCTACCAGATTTGGCACTGTAGCTGTCCCTAACATTTTGTTATTTCAAGGAGCTAAACCAATGGCGAGGTTTAACCATACAGATCGCACTCTGGAAACACTGAAAATCTTCATTTTCAATCAGACAG
GTATATAGAAATAACATCCAGGGGA..........TTGAAACAATTAATTTCTCTTTCAG
GTATAGAAGCCAAGAAAAATGTGGTGGTAACGCAGGCTGATCAGATGGGCCCTCTCCCCAGCACTTTGATAAAGACTGTGGATTGGTTGCTGGTGTTTTCCTTGTTCTTTTTAATTAGTTTCATTATGTATGCTACCATCCGCACTGAGAGTATTCGGTGGCTGATTCCAGGACAAGAGCAGGAACACGCAGAGTAAAGACAGAACTGAACTGGAACAAGCGGGGTCTCAGCCCCTCCTTTGTGGACTTAGCATTACAGTCGCTAAATGTGTGGACTTGCAACGGAAATCAGATTCAAGAATCATGTTCTTGTTGGACTACTGAAAAGCTGAAAAGATTTCATATAAATGTGTTTTTCCTATGACAACTAGCAGGTACAAAAATGTCCACTAGAATTGACTGTTGTTGCTTTTTAATACTTGAACATAATGAATTTCTTTTCTAGTGTCGTCAAACAGGAAAGTGTTGTCTCAGAAGAGGAGCTAGGATGGGAAGTATGGGCTAGGACGGGAAGTGCGGGTCTACCACAGGACCAGGTGAAAAATAAAGTCACTG
AAACAATTCAAAGTGGTTTCGCTTGTTTCTGGGAATGGCAGACTTTAGGAGAAACTCCTA
ATTCTAATTAAAACATGTTAATTCTGTGCTAGAGCACAGACATTGCCCAGTCATATACTA
GCACACAGCTAGATTGAGATCCAAAGGAAGTTTAGAACCCTGTCCTTGCCTGGAGGTTGA
GTCTGGTCTAGTTTAGGACACAGCAAAGAGATGACATGGGCCGCTGAGATGGCTTAGCAG
ATAAAGGTGCTTGTCACCAAGTGTGAAGATCTGAGTTCGATCCCTGTGTTCCACACGGTG
GGAGGAGAGAACTGGCAAATTGGTAATATTAATGTGCTAATTTAGAAAAACTAACAGGAT
AGTGCATGGTGACATGTCCAAAATCCCCAGCTTCTGGGAGGTGGAGATGGATGTTCCAGG
CCAGCCTCTGCAACTCTACCTGGCTTCATGAAACTGTCTCAGGAAAGGAATACAACAAAG
TTACCTAGTAAAAAAACCAAAATGAGGGGGCTGGAGAGATGATTCAGTGGTTAAGAGCAC
TGACTGCTGAGTTCAAGTCCCAGCAACCACATGGTGGCTGGCTCAAAACCATTTGTCATA
AGATCTGACGCCCTCTTCTGGTGTGTCTGAAGATAGCTACAGTGTACTTACATATAATAA
ATAAATAAATCTTTAAAAAAAAAAAAAAAAACAAACCCAAAACCAAAAAGATACAAATCG
AGCTAAAAGCTGCAACATTTTACTCAAAACTCAGCACTATGTTAAGCCCCGCCCCTACCC
CCCCCACCCAGCATGGGTTTTAAAATGAATTTTATTGTCAGTTACATCGCAAGAAAAAAA
ATGACAAAAGAATAATAAAGATCAATATACACACATAGGACCTGCATGTAAGGGAACAGA
GTTGTCTCCACCCGTCCTGGGTGGGTGATGCACTTGTGCATGCAGCATGGTCGAGCTGCA
GAGAGGAGTGAGCTCAGCGCGGCGTCCCGGGTCGCGGCAG..........

No.	Exon / Intron	Start	End	Start Phase	End Phase	Length	Sequence
	5' upstream sequence						..........ACAGTGGACTAGTACCCAGCTACTAAGTTACTAAGTATTACAGCGTCTTG ACTCAGATTGCCAAGACCTTTGGTTCATAACCCTTGGCCTTCTTCGAGAGCAGTATGTAC TCTTAATCTCAAAGTTATCTTCCCCTCTCCCCTCCCCCTTTCTGCTCTCATCTCTTCAAC TCCCTTCCCCTCCACTCTTTTCTCCTTCCTTTTCCCGCCTCTCATTTTTGAGACAAGGTC TCATTCTGAAGCCCAGGCCAGTTCTGGAATTCATGATGTAGCCCAGACTGGCTTGGAACC CACAGTAATTCTCCTGCCAGAAGAGGGCATCAGATCTCATTATGGATGGTTGTGAGCCAC CATGTGGTTGCTGGGATTTGAATTCAGGACCTCTTGAAGAGCAGTCATTGCTCTTAACTG CTGAGCCATCTCTCCAGCCCCCCTAAGTGTCATTATCTTAGGAGTCCCAGTGTTAAAACC AACCAACCAATTTGCCAGAAGTAGCAAATTATAGGATAGACAGTTACATACACACATACA GCAGTTATGCGAAGTTCAAATTTTTTTTTTTTTTTTAAAACTTCAGTCTTCGGACCTTCG GAAGAGCAGTCGGGTGCTCTTACCCACTGAGCCATCTCTCCAGCCCGCGAAGTTCAAATT TAACTGGATCTATCCTCTGTCTGGCAACACAAGCTAGTGCAACATGCTGAAGTAATACAT CAGACTATCTGTGATTTCCCAAGGTTCTGTCCCTCCTCCATTGTGCACAAGTTTCTTGGC CTTTTTGTCTCTTGAAATGAAAGGTATTAACTCCGCACACAGGTTCAGTACGTGTCGCAA GCAGCGAGGAGTTCTCATGGGAATGGCTATTGATGGCTGCTCGAATCCTACTTTGATACT TGTTCCCCAAAAGCGGCTTCCAGTACAGGTCGCACAGGCCTGGCTAGAGGCCGACCGCCC GACTCCAAGATGGCGTCTGCAGCGTCGGCCAGGAGTCAAGATGGCGGCCC
1	EXON 1	55,714,650	55,714,844	-	1	195	GCGGCCACGCCTGCGCTCTGGGCTCTCCTCCCCGTAGTCTCCCTGGGGCGGGGGGTGCGA CTCCGGTTGCCGGTGCGCCGATTTTCTTCCACCGCGGTGGCTGTCGCCGCGGCTCCCTGT CGCGCGCCATGCAACTCCTCTGCTGGTGGCAAGTCCTGCTGTGGGTGCTGGGCCTTCCGG CCCACGGCCTGGAGG
	INTRON 1 - 2	55,714,845	55,717,791			2,947	GTGAGTGCGGATCGGGGTCCGGCGA..........GTGACAGTATGCTGCCCTGCTTTAG
2	EXON 2	55,717,792	55,718,267	1	0	476	TTGCAGAGGACAGTGGTCACCCCTGGCGGGAGGAGCGGCCTGTCCCTGCTCTCCAGGTAG GAGCTGTGTATCTGCATGAAGAGGAGGTTGCTCAGGACCATCGGGACCAGGCAAGAGCGG CGGAACCCATGGAGGCCTCTCTGGGTCCGCGCGGAGATCCCATGGTGGTGCTGTCAGTGG TCCCTGGGGCAGCTGAGGACCAACGGAGCCCCGAGGCCCACGATGGCACCTGCAGTGCGC AGGGAGAGGAGGACCCGAGCTGTGGCCGAGAGAACCTCTTCGGGCTGCAGGGGGCAGGCA GCTTCCAGGATCGGGAAGAGGAGTACTATGCTGAGCCTGGCGTGACTGAGGCCGAGCCTG TAGCCACCGAGGATGCCAACAGCACTGACAGCCTCAAGTCTCCCAAGGTGAATTGTGAGG AGAGGAATGTGACTGGGCTAGAAAACTTCACTCTGAAGATTTTAAATATGTCCCAG
	INTRON 2 - 3	55,718,268	55,721,578			3,311	GTAGGAAGCACGTGTTAATGTCTGT..........TTAACTATTGTGCTTTTCTTTGTAG
3	EXON 3	55,721,579	55,721,742	0	2	164	GACCTCATGGATTTCCTAAACCCAAATGGTAGTGACTGTACACTGGTCCTCTTCTACACC CCGTGGTGCAGGTTTTCTGCCAGCCTGGCTCCTCATTTTAACTCCCTGCCCCGGGCGTTT CCAACACTTGGCTTCTTGGCTCTGGATGCATCTCAGCACAGCAG
	INTRON 3 - 4	55,721,743	55,724,507			2,765	GTATCCTTGGCAGACTGTGGCTTGT..........CTTAACTGCTTTCTTTGTCTTACAG
4	EXON 4	55,724,508	55,724,638	2	1	131	CCTTTCTACCAGATTTGGCACTGTAGCTGTCCCTAACATTTTGTTATTTCAAGGAGCTAA ACCAATGGCGAGGTTTAACCATACAGATCGCACTCTGGAAACACTGAAAATCTTCATTTT CAATCAGACAG
	INTRON 4 - 5	55,724,639	55,725,666			1,028	GTATATAGAAATAACATCCAGGGGA..........TTGAAACAATTAATTTCTCTTTCAG
5	EXON 5	55,725,667	55,726,221	1	-	555	GTATAGAAGCCAAGAAAAATGTGGTGGTAACGCAGGCTGATCAGATGGGCCCTCTCCCCA GCACTTTGATAAAGACTGTGGATTGGTTGCTGGTGTTTTCCTTGTTCTTTTTAATTAGTT TCATTATGTATGCTACCATCCGCACTGAGAGTATTCGGTGGCTGATTCCAGGACAAGAGC AGGAACACGCAGAGTAAAGACAGAACTGAACTGGAACAAGCGGGGTCTCAGCCCCTCCTT TGTGGACTTAGCATTACAGTCGCTAAATGTGTGGACTTGCAACGGAAATCAGATTCAAGA ATCATGTTCTTGTTGGACTACTGAAAAGCTGAAAAGATTTCATATAAATGTGTTTTTCCT ATGACAACTAGCAGGTACAAAAATGTCCACTAGAATTGACTGTTGTTGCTTTTTAATACT TGAACATAATGAATTTCTTTTCTAGTGTCGTCAAACAGGAAAGTGTTGTCTCAGAAGAGG AGCTAGGATGGGAAGTATGGGCTAGGACGGGAAGTGCGGGTCTACCACAGGACCAGGTGA AAAATAAAGTCACTG
	3' upstream sequence						AAACAATTCAAAGTGGTTTCGCTTGTTTCTGGGAATGGCAGACTTTAGGAGAAACTCCTA ATTCTAATTAAAACATGTTAATTCTGTGCTAGAGCACAGACATTGCCCAGTCATATACTA GCACACAGCTAGATTGAGATCCAAAGGAAGTTTAGAACCCTGTCCTTGCCTGGAGGTTGA GTCTGGTCTAGTTTAGGACACAGCAAAGAGATGACATGGGCCGCTGAGATGGCTTAGCAG ATAAAGGTGCTTGTCACCAAGTGTGAAGATCTGAGTTCGATCCCTGTGTTCCACACGGTG GGAGGAGAGAACTGGCAAATTGGTAATATTAATGTGCTAATTTAGAAAAACTAACAGGAT AGTGCATGGTGACATGTCCAAAATCCCCAGCTTCTGGGAGGTGGAGATGGATGTTCCAGG CCAGCCTCTGCAACTCTACCTGGCTTCATGAAACTGTCTCAGGAAAGGAATACAACAAAG TTACCTAGTAAAAAAACCAAAATGAGGGGGCTGGAGAGATGATTCAGTGGTTAAGAGCAC TGACTGCTGAGTTCAAGTCCCAGCAACCACATGGTGGCTGGCTCAAAACCATTTGTCATA AGATCTGACGCCCTCTTCTGGTGTGTCTGAAGATAGCTACAGTGTACTTACATATAATAA ATAAATAAATCTTTAAAAAAAAAAAAAAAAACAAACCCAAAACCAAAAAGATACAAATCG AGCTAAAAGCTGCAACATTTTACTCAAAACTCAGCACTATGTTAAGCCCCGCCCCTACCC CCCCCACCCAGCATGGGTTTTAAAATGAATTTTATTGTCAGTTACATCGCAAGAAAAAAA ATGACAAAAGAATAATAAAGATCAATATACACACATAGGACCTGCATGTAAGGGAACAGA GTTGTCTCCACCCGTCCTGGGTGGGTGATGCACTTGTGCATGCAGCATGGTCGAGCTGCA GAGAGGAGTGAGCTCAGCGCGGCGTCCCGGGTCGCGGCAG..........

Sequence Detail Report

Gene Symbol (Gene ID)	Txndc15 (ENSMUSG00000021497)
Transcript ID	ENSMUST00000021959

		SNP Information
Strain :
Sequence Retrieve :
Exon translate : CDS Start ( 1 ) - End ( 345 ) -
Strand :	forward reverse
Show sequence :	nucleotide amino acid
Color information