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Target CDS Information

Gene Symbol (Gene ID) Slc9a2 (ENSMUSG00000026062)
Cross Reference
CCDS CCDS14914.1
EMBL AC154392, BC103685, BC104737
GO GO:0005903, GO:0006814, GO:0006885, ...show all
goslim_goa GO:0003674, GO:0005575, GO:0005623, ...show all
MGI_trans_name Slc9a2-001
OTTP OTTMUSP00000068961
OTTT OTTMUST00000128063
protein_id AAI03686.1, AAI04738.1
Reactome R-MMU-382551, R-MMU-425393, R-MMU-425407, ...show all
RefSeq_mRNA NM_001033289.2
RefSeq_peptide NP_001028461
UCSC uc007aun.1
UniParc UPI00001C211F
Uniprot/SPTREMBL Q3ZAS0
Vega_transcript OTTMUST00000128063, Slc9a2-001
Vega_translation 179134, OTTMUSP00000068961
Definition protein_id:ENSMUSP00000027231
translation:
MGPRGTAHSVRAPLSWLLLLLLSLQVAVPAGALAETLLDAPRARGASSNPPSPASVVAPG
TTPFEESRLPVFTLDYPHVQIPFEITLWILLASLAKIGFHLYHKLPTIVPESCLLIMVGL
LLGGIIFGVDEKSPPAMKTDVFFLYLLPPIVLDAGYFMPTRPFFENFGTIFWYAVVGTLW
NSIGIGVSLFGICQIEAFGLSDITLLQNLLFGSLISAVDPVAVLAVFENIHVNEQLYILV
FGESLLNDAVTVVLYNLFKSFCQMKTIQTVDVFAGIANFFVVGIGGVLIGILLGFIAAFT
TRFTHNIRVIEPLFVFLYSYLSYITAEMFHLSGIMAITACAMTMNKYVEENVSQKSYTTI
KYFMKMLSSVSETLIFIFMGVSTVGKNHEWNWAFVCFTLAFCLIWRALGVFVLTQVINWF
RTIPLTFKDQFIIAYGGLRGAICFALVFLLPATVFPRKKLFITAAIVVIFFTVFILGITI
RPLVEFLDVKRSNKKQQAVSEEIHCRFFDHVKTGIEDVCGHWGHNFWRDKFKKFDDKYLR
KLLIRENQPKSSIVSLYKKLEIKHAIEMAETGMISTVPSFASLNDCREEKIRKLTPGEMD
EIREILSRNLYQIRQRTLSYNRHNLTADTSERQAKEILIRRRHSLRESLRKDNSSNRERR
ASTSTSRYLSLPKNTKLPEKLQKKKKVSNADGNSSDSDPDVGTTVLNLQPRTRRFLPDQF
SKKASQAYKMEWKNEVDVGSVRVPPSVSPAPRSKDGGTQTPGLLRQPLLSKDQRFGRGRE
DSLTEDVPPKPPPRLVRRASEPGNRKGRLGNEKP

Chromosome 1
Length
Position(start - end)
86,124
40,681,874 - 40,767,999
Orient to Chromosome plus
Link Location : (1:40681874-40767999)
/

Detail Map


 

Report

Polymorphisms Report

Target Strain  MSMv4  JF1v3  KJRv1  SWNv1  CHDv1  NJLv1  BLG2v1  HMIv1  BFMv1  PGN2v1
Gene Symbol (Gene ID) Slc9a2 (ENSMUSG00000026062)
Transcript ID ENSMUST00000027231
Reports
substitution
cSNPs11
Insertion56
Deletion73
SNPs
-1kb
5'UTR
CDS
3'UTR
INTRON
+1kb
Insertions
-1kb
5'UTR
CDS
3'UTR
INTRON
+1kb
Deletions
-1kb
5'UTR
CDS
3'UTR
INTRON
+1kb
coding sequence substitutions
premature termination by the nucleotide substitution0
synonymous num11
non-synonymous num0
synonymous substitutions 40718665 (p.Leu121Leu), 40718893 (p.Ala197Ala), 40718947 (p.Ile215Ile), 40719001 (p.Asn233Asn), 40726348 (p.Phe299Phe), 40742626 (p.Thr338Thr), 40742653 (p.Tyr347Tyr), 40743804 (p.Gly409Gly), 40761967 (p.Ser552Ser), 40761970 (p.Ile553Ile), 40763609 (p.Leu606Leu),
non-synonymous substitutions
B6 transcript
(ENSMUST00000027231)
MGPRGTAHSVRAPLSWLLLLLLSLQVAVPAGALAETLLDAPRARGASSNPPSPASVVAPG
TTPFEESRLPVFTLDYPHVQIPFEITLWILLASLAKIGFHLYHKLPTIVPESCLLIMVGL
LLGGIIFGVDEKSPPAMKTDVFFLYLLPPIVLDAGYFMPTRPFFENFGTIFWYAVVGTLW
NSIGIGVSLFGICQIEAFGLSDITLLQNLLFGSLISAVDPVAVLAVFENIHVNEQLYILV
FGESLLNDAVTVVLYNLFKSFCQMKTIQTVDVFAGIANFFVVGIGGVLIGILLGFIAAFT
TRFTHNIRVIEPLFVFLYSYLSYITAEMFHLSGIMAITACAMTMNKYVEENVSQKSYTTI
KYFMKMLSSVSETLIFIFMGVSTVGKNHEWNWAFVCFTLAFCLIWRALGVFVLTQVINWF
RTIPLTFKDQFIIAYGGLRGAICFALVFLLPATVFPRKKLFITAAIVVIFFTVFILGITI
RPLVEFLDVKRSNKKQQAVSEEIHCRFFDHVKTGIEDVCGHWGHNFWRDKFKKFDDKYLR
KLLIRENQPKSSIVSLYKKLEIKHAIEMAETGMISTVPSFASLNDCREEKIRKLTPGEMD
EIREILSRNLYQIRQRTLSYNRHNLTADTSERQAKEILIRRRHSLRESLRKDNSSNRERR
ASTSTSRYLSLPKNTKLPEKLQKKKKVSNADGNSSDSDPDVGTTVLNLQPRTRRFLPDQF
SKKASQAYKMEWKNEVDVGSVRVPPSVSPAPRSKDGGTQTPGLLRQPLLSKDQRFGRGRE
DSLTEDVPPKPPPRLVRRASEPGNRKGRLGNEKP*
MSMv4 transcript
MGPRGTAHSVRAPLSWLLLLLLSLQVAVPAGALAETLLDAPRARGASSNPPSPASVVAPG
TTPFEESRLPVFTLDYPHVQIPFEITLWILLASLAKIGFHLYHKLPTIVPESCLLIMVGL
LLGGIIFGVDEKSPPAMKTDVFFLYLLPPIVLDAGYFMPTRPFFENFGTIFWYAVVGTLW
NSIGIGVSLFGICQIEAFGLSDITLLQNLLFGSLISAVDPVAVLAVFENIHVNEQLYILV
FGESLLNDAVTVVLYNLFKSFCQMKTIQTVDVFAGIANFFVVGIGGVLIGILLGFIAAFT
TRFTHNIRVIEPLFVFLYSYLSYITAEMFHLSGIMAITACAMTMNKYVEENVSQKSYTTI
KYFMKMLSSVSETLIFIFMGVSTVGKNHEWNWAFVCFTLAFCLIWRALGVFVLTQVINWF
RTIPLTFKDQFIIAYGGLRGAICFALVFLLPATVFPRKKLFITAAIVVIFFTVFILGITI
RPLVEFLDVKRSNKKQQAVSEEIHCRFFDHVKTGIEDVCGHWGHNFWRDKFKKFDDKYLR
KLLIRENQPKSSIVSLYKKLEIKHAIEMAETGMISTVPSFASLNDCREEKIRKLTPGEMD
EIREILSRNLYQIRQRTLSYNRHNLTADTSERQAKEILIRRRHSLRESLRKDNSSNRERR
ASTSTSRYLSLPKNTKLPEKLQKKKKVSNADGNSSDSDPDVGTTVLNLQPRTRRFLPDQF
SKKASQAYKMEWKNEVDVGSVRVPPSVSPAPRSKDGGTQTPGLLRQPLLSKDQRFGRGRE
DSLTEDVPPKPPPRLVRRASEPGNRKGRLGNEKP*
homology100.00 (815 / 815)

Exon Detail Report

Target Strain  MSMv4  JF1v3  KJRv1  SWNv1  CHDv1  NJLv1  BLG2v1  HMIv1  BFMv1  PGN2v1
Gene Symbol (Gene ID) Slc9a2 (ENSMUSG00000026062)
Transcript ID ENSMUST00000027231
No. Exon / Intron Start End Start Phase End Phase Length Sequence
5' upstream sequence
..........AAGTCTACATGCTGGCTCTTCATGGGCTGAGCCATTCCCCAGCCCCAGCA
GGTTGCTCTTTATCTCCTCTTTATCACCCACAAGACTGAATAAAAAGATTTTCCCAAGTT
TTACAAAAACCGATTAGTCTTTGCAGTAGCAGAGATTTACAAAGGACAGTGACTCCAGCA
TCTGTGACCTGTGTAGATACTCTAGACAGTGAGGTGGAATGTCATTTATCCTACGATGCA
CAGTCGTTCTCAATATTCTCATGCCTAGGAATAACTGTCTGACTGCGTGCTTGCCCTCCT
GTGATGTCACAACATCTAAGAATAACTGTCCGACTGTGTGCTGCTTACTCTCCGCAGAAC
TTCATCCTATTAAGAGTTATGCTCTTAAACGACCCCTAAAATATTCTTCATTGTTCTATT
TGATAAATAATCTAAAATTGGTAGTGTGGGGTGGAACCAGCTTTAGCAAGGTCAGGCCTG
GGTGTGGAAACCTTCTAGAACTTTAATCTAGAAGGGTGTTCGTGTGTGTGCAGTGCTTCA
CCTGTAAAACAGATACAGTTTCTCCCTCCCAACTTCGGTATTTGAGATAACCAAAAATTC
AAGTGAAAGTGCTTTCCCAGCGCCTCTTCTGGAGAGAAAGGCAATTCGAGAAAGAAAACA
CTTAGTTAACAAGTCCTTTCTTAGAAAAGAGATGGGAGAATCAGTCGTTGATATGCAAAT
GTCCAGCAGGGAGGAAAAGGGTTAGGCTCTGCCTGTTTCAGTAAATCTTTACAAGGAAAC
AGAATCTTCACAGGCAGTTCCACTTCAAAGCTGGAAAACTGATACATTCTGTGCCGATTC
TGTATCAACCCTGAGACCCATTCTACTTCGGGCTAGAATGGTCCCTGCCTTTCCCAGACT
CAAAGGTTCCTTGCTTGCCTCTATTCAGATGGCCCCCGATGACTGACATCTCACAGATTC
TGTTAGACCTTTCTGTGTCAGACTGAGGGGTGTATAAACAAGAGCCGGAA
1 EXON 1 40,680,574 40,682,165 - 1 1,592
CCCTGTGGGAAAGATAAGAATTTTTATTTTATACGTTTAGGGGAAACCGTGTGGGTTAAC
TGGGAGGCAGATGGTTTGGTTTCGGTTCCTTTCAGTTTCTCACCGTGAGGACACCGGGAC
AGTGGGATCGCAGGCAGGGCACCTGGCAATGCCCCTGCGGAAGGTCGGGCTTGGGAGAAG
GGCCAGTTGGCGCTGGGAGAATCCCGCTTTTCCAAACCGCAGTCCATCCTGTAATTAGCC
GAACAAGTCCGTCTAAGCTAGGCAAATCACTGGTTTTCCACGAAATAGTTATGTTTCTGA
TGCCCTCAGACAGATTCACCTCGAAGCCTAAAAACAGAGACTTTTTCGTCCCCAAAGCTG
GGGGAGGGAAGAAAAGTGGAGTGCACACTGTTACAAGGAGTGGAAAAGCGGAAAGACAAG
GGTTCTGGGAGAGCGTGGGAGCGCTGAGTTCTCAACCGGGAGTTTCGGTGCGCAGAGAAC
AGGCTGTGTTCAAGGTGCTTTGCTCTTCCTTCTCATCTTTCCGAGGCCCTGAGAGGCTCC
CCTCGGTGAGTCGGTCTCTGCAGACCCGGCAGTGGCGAAGGCTCCCCAGTTCCTCCGCGC
CCGGCGTCGCCTCCCTGCCTGAGCCCGCGGCGCCTCCTCGCGTGCCAGCGCCCCGGGGTG
TCTCCTTGCAGGAGCCTGCGGGGGGAGGGGGCAGGGCGCGACGCGTGGGTCGCGTCGGTC
CCAGCCCTGATGGACGGCCGACGCTGCCTCCGGGGCGGGGACAGCTCAGGCCACCGTGCG
CACCGAGCACCTAGTGCACCCACAGCTCCCGGGCTCCCAAGAACAGCGGCGCTTGGTCCG
CGGGCGGGCTAGAGAGCGGCGCGACCTTCGCCCCCGCGTCGACTGTGGGTTGCGGCAGGT
GCGCGTCGCACCGGGTCTCCGCGTCCTCCCGCCCCGCCACCGGGGCGCCGCGCCCGCCCC
GCCCCGCCCCCGTCCCCGTCCCCGCCCGCCCTCGGGCCGCCCCGGGCAGGGCCTGTAGCT
GCCAGGCATGGGAGGGCGGCCGGCGGCGGAGGGCGGCTGAGCAAGGCTGAGCGCGGCGGA
GGGACCGCGCAGTGGCCTCCTGTCGCTGCGCGCTCCCCTCCGGGCCCTGCGAGGTTCACA
CCCACCGAACTTGTTGGCGACAGGGCCCAGACCCCGTGGAGGCGGTGGTGTGGTACTCTC
GCAGTCCCGTTGAGTTAGTAGTGCTGTCCCCCCCGCGATGCTCTGAGGGAACCCAGATCC
TACACCAGCGTCCTCTGCTGCGCTCATAGCTGCCGACCCCATGGGCCCCCGGGGCACCGC
GCACAGCGTGCGGGCGCCACTGTCTTGGCTGCTGCTGCTGCTGCTGTCTCTGCAGGTGGC
AGTGCCGGCGGGCGCGCTGGCCGAGACCCTGCTGGACGCACCCAGGGCCAGGGGTGCCAG
CTCCAACCCGCCAAGTCCTGCCAGTGTGGTGGCCCCGGGAACGACGCCGTTCGAGGAAAG
TCGGTTGCCCGTGTTCACCCTGGATTACCCCCACGTGCAAATCCCTTTCGAGATCACTTT
GTGGATCCTACTGGCCTCCTTGGCCAAGATTG
INTRON 1 - 2 40,682,166 40,718,594 36,429
GTAAGGAACCGTACCCGTGGGTGGG..........CCCAGACTCTGTTTCTCCTAACCAG
2 EXON 2 40,718,595 40,719,058 1 0 464
GTTTTCATCTCTATCACAAGTTGCCCACAATCGTGCCGGAGAGCTGCCTTCTCATAATGG
TCGGGCTTCTGCTGGGTGGGATTATCTTCGGTGTTGATGAGAAGTCTCCCCCGGCAATGA
AGACAGATGTGTTTTTCCTATACCTCCTGCCACCCATCGTTCTGGATGCTGGCTACTTCA
TGCCAACTCGCCCCTTCTTTGAGAACTTCGGCACCATTTTCTGGTATGCTGTGGTAGGCA
CACTGTGGAATTCCATTGGCATTGGGGTGTCTTTGTTTGGCATCTGCCAGATTGAGGCAT
TTGGCCTCAGTGACATCACCCTGCTCCAGAACCTGCTCTTCGGCAGCCTGATCTCAGCTG
TGGACCCCGTGGCTGTGCTTGCTGTCTTTGAGAACATTCACGTCAACGAACAGCTCTATA
TCCTGGTTTTTGGCGAGTCTCTGCTCAACGATGCAGTCACAGTG
INTRON 2 - 3 40,719,059 40,726,207 7,149
GTGAGTGAACAGATCACAGATCACA..........ACAGTGTGCTTTCTCATCCCCTCAG
3 EXON 3 40,726,208 40,726,458 0 2 251
GTCCTGTACAACTTGTTCAAGTCCTTCTGCCAGATGAAAACCATCCAGACCGTAGACGTG
TTTGCTGGCATCGCTAACTTCTTCGTCGTGGGTATTGGCGGGGTGCTGATTGGCATCCTC
CTGGGATTCATAGCAGCGTTCACCACCCGTTTCACACACAACATCCGGGTCATTGAGCCA
CTCTTTGTCTTCTTGTACAGCTACTTGTCCTACATCACTGCTGAAATGTTCCACCTTTCA
GGCATCATGGC
INTRON 3 - 4 40,726,459 40,742,619 16,161
GTAAGTGGCTCACCGCTAACAGCCC..........AATTGAAGCCACGTCTCCCCTCTAG
4 EXON 4 40,742,620 40,742,837 2 1 218
GATCACGGCGTGTGCCATGACAATGAATAAGTATGTGGAAGAGAACGTGTCTCAGAAGTC
CTACACAACCATCAAGTACTTCATGAAGATGCTGAGCAGCGTGAGCGAGACCCTGATCTT
CATCTTCATGGGCGTGTCCACTGTTGGGAAGAACCACGAGTGGAACTGGGCTTTCGTCTG
CTTTACCCTGGCCTTCTGCCTGATCTGGCGAGCACTGG
INTRON 4 - 5 40,742,838 40,743,802 965
GTAATGGACAGTCGGGGACACTGCT..........AAGTCTGCTCTCTCTTTATCCATAG
5 EXON 5 40,743,803 40,744,005 1 0 203
GTGTCTTTGTCCTGACTCAGGTGATTAACTGGTTCCGGACCATCCCGCTAACCTTCAAGG
ACCAGTTCATCATTGCCTACGGAGGGCTCCGTGGCGCCATCTGCTTTGCACTGGTGTTTC
TCCTCCCTGCTACTGTGTTTCCCCGAAAGAAGCTGTTCATCACGGCTGCTATTGTCGTTA
TATTCTTCACTGTCTTCATCCTG
INTRON 5 - 6 40,744,006 40,755,708 11,703
GTGAGTGTAGCGTCCTTCTAGAAAA..........TACTTATGTACATATTTTCATGTAG
6 EXON 6 40,755,709 40,755,798 0 0 90
GGTATAACCATCCGGCCACTGGTGGAATTTCTTGATGTTAAGAGATCCAATAAGAAGCAG
CAAGCTGTCAGTGAAGAGATCCACTGTCGG
INTRON 6 - 7 40,755,799 40,756,258 460
GTAGGTGCTGACCGGAGATCAGCTT..........TAGCCTGTATTTCCTTCTCTTGTAG
7 EXON 7 40,756,259 40,756,329 0 2 71
TTTTTTGATCATGTGAAGACTGGGATTGAAGATGTGTGTGGACACTGGGGTCACAACTTC
TGGAGAGACAA
INTRON 7 - 8 40,756,330 40,761,900 5,571
GTAAGAGGCCAAGCAATGTTGTATC..........AAACTCTGGATTTACTTATTTGTAG
8 EXON 8 40,761,901 40,762,062 2 2 162
GTTTAAGAAGTTTGATGACAAATACCTTCGGAAGCTTCTGATTCGGGAAAACCAACCCAA
GTCCAGCATCGTGTCCTTATATAAAAAGCTTGAGATAAAGCATGCCATTGAAATGGCAGA
GACAGGGATGATAAGCACTGTCCCCTCATTTGCATCTCTCAA
INTRON 8 - 9 40,762,063 40,763,542 1,480
GTGAGTACCACTTTGTCAAGGGAAG..........ACTTTTCTCCCCTAACCATTTTCAG
9 EXON 9 40,763,543 40,763,639 2 0 97
TGACTGCCGTGAAGAGAAAATAAGGAAGCTCACGCCAGGCGAAATGGATGAAATTAGAGA
GATATTGTCACGGAATCTCTATCAAATCCGTCAGCGG
INTRON 9 - 10 40,763,640 40,765,564 1,925
GTAGGAAAAATTTACACATCAGAAT..........GTCCCATGCGCTTTTGTCATTTTAG
10 EXON 10 40,765,565 40,765,696 0 0 132
ACCTTGTCCTATAACAGACACAACCTGACGGCAGACACAAGCGAGAGGCAAGCCAAGGAG
ATCCTGATTCGCAGGCGGCACAGTCTTCGGGAAAGTCTCAGGAAAGACAACAGCTCAAAC
CGCGAGCGCAGG
INTRON 10 - 11 40,765,697 40,766,242 546
GTAACGGCTACCCCCAGAGTCGCAG..........ATCTGAATAACACTTTCTTTCCCAG
11 EXON 11 40,766,243 40,766,333 0 1 91
GCTTCCACTTCAACCTCCCGATATTTATCCTTACCTAAGAACACAAAGCTTCCAGAGAAG
CTGCAGAAGAAGAAGAAGGTTTCAAATGCAG
INTRON 11 - 12 40,766,334 40,767,625 1,292
GTAAGGATTCTGCCCGGAGGAGAGA..........ACACTGCCCTTCTATTCTGTGACAG
12 EXON 12 40,767,626 40,769,273 1 - 1,648
ATGGAAATAGCAGCGACTCGGACCCAGATGTTGGAACCACTGTGCTCAATTTGCAGCCCA
GGACCAGGCGCTTCTTGCCAGATCAGTTCTCAAAGAAAGCCTCCCAGGCCTACAAAATGG
AATGGAAGAACGAGGTGGATGTGGGTTCTGTGCGAGTGCCCCCCAGCGTCTCTCCAGCGC
CCCGCAGTAAAGACGGGGGCACCCAAACACCGGGGTTGCTGAGGCAGCCCCTGCTCTCCA
AAGACCAACGGTTTGGCCGGGGTAGGGAAGACAGTTTGACTGAAGACGTTCCACCCAAGC
CCCCACCAAGGTTGGTGCGACGAGCGTCAGAACCCGGGAACAGGAAAGGCCGCCTTGGCA
ATGAAAAGCCATGATAAGAAGCCAAAGCCGACTTGGGGTGAATGGGCTAGCATGGCTGTG
ACTTGTTACTCAAACCTGATCTACCGTTTAAAATCCTCTACCTAGAGGCATTCTTTGGGA
AGTAGAGTCAAGCCACTGATTCCCAGGAGGAGCGCTGCTTATCTATCCCAAGAAGAGGAA
GTCCCACAAAATGACTTTTGTGACTTTTGGCTAGTAAATGTATTCTTTCAAGGCCTGAAA
GAAAAAAAAAGTGTGCCTTTACTGAACTTGAATGACAGAACTTGAAAATTTTAACGCGCC
TTTGTTGGTGAAAATTTTAATATATTACAAATATGCCTCAGATTTATTTATGAAAAAAAT
GTGTTTATCTGTAGTGATTTTTTTTAAGGGAATGACACCAAAAGTGTCGAGAATATTTTT
CCAAGGGGGTGAGGGTCAACTCCTAGAGGTGGGTCCTAAGTTCCAGATCCTACCATTTCC
ATGCTGAGCTGAAGGACTCAGTGAAGAAGAACATTGTCCCTAGAAGAGGCTTTGACTGAC
AGTAATAGGGCACAGGTTGGAATGGGTAGGCACATGAAATGGTGTGACTCTCAGAGTGTG
GGTGGGAAGTCCCTGTACAACTTTAAAACAATGAGGTTCAGGCTGCTCTTGGTCCATTTC
TGTGTTTTTCCTGGCTTTGGAGTAACATGCACTCTCCACCTGCCACCTCACCACACCCCC
CTTTTTGTCTAGGTACAGACAGATTCACTCGGGCAAAAATCAGCCCATAGTGTTTAAAGA
CTTGGTGGCAGCTTCTGAGAAGTCCTACCAGTGAGGACCTCTTGTGGCCATTGTGGATAT
GGCAGCCACTAGAGCCCGCTTGGGTTTTATGTTGTGTGGGGCTGGGAGGAAAGGGAGGTG
GTTCCTTTCATTAGGGATCCAGGATCACCCGCTTTAATAAAATTGTCCTGTAGTGCATTC
AGAGCTGCAAGCGGTAAAGGATCAACGCTTATACAGACCGCCTTCCAGTGTTGAAGGAAA
TGGTGAGTCTTTGGGTTTGACTTTGGATGAGGAAGCTCTTTGGAGAAAACCCCCGCTTTT
TGCACTAGTCCTTAATTTGTTACCTCTTTCGCCTTTGATAATGTAGTGACTCAAATCTGT
CATTAAGAATTAGATTCTATTCTCTGGAATACTTCTTAGGAGTATGGCAGGGAGAAACGG
TAGGACGCAATCACTAAAGGTTCATATTTAAACCAATGTCTCTTAAGCTGCAGATTTATT
AATTATTAAAGATTCATATTTAAACCAA
3' upstream sequence
TGTCTCTCGAGCTGCAGGAGATTTATTGACTTCTCATGTGTTTTCGGAATTTCTTCTTTA
ACACTTTCCTGGGTTTACATTTTAAATGAAGCCAGTACTATAGTTGTTACCAGAGATCTT
TTGGCCACAACAAAGGATACAAAGTAGCTTGGAAGGATCCTTTGCTTTGTAGGAGCTGTG
ATAACCCACTCTGACTTAAAAGTCCCGGGGGCAGAAGACTGTCATTGTTGGTGACTGCTG
TGGGAAGCCCCAGCCCACTGGGACCCACACCATGCCTTGGAGTAGGTGAGCCTTGGCTGC
ATAAAGCAAGCAAATTAAGCACCAACCTGAAAAGCAAGCCTGGAACCTCCCCCTTTGTTT
TTGCTTCAGTTCTTGCCCTGGCTACCCTCAGGGATGGACTGTGCTCAGGCATGGCTGGCC
TCGGGCCAGTCTGATCCAGGCAATTCTTCAATTGAGACTCCTTCTTCCCAGGTGAATCTA
AATTGTGTCAAGTTGACAACAAGCTTAACCAGGACAGAGGGTAAGGACATGCCTGAGTGA
ACATAGGAGCAGCTCTGTGGCTCCTTTCTCCACTACAATTAACGTAGCGTTTCTTGTGTT
CTTGTCTTAAGAGGCTGCTAGGCCATCATGTGAGCCTGAAAATAATGCACACACAGTTAA
AACATGTCCTTCCCTCCCCAGAAGTCCAAGATAGATTCATGGGAAAACATGAAAACACAA
TTGGAAAGCTACACGCTTAGAACTCCGTGCCAAAACAAACAAACAAACAATCTCCATTTT
AAATGACTATATTTTTATAAACCATGTATTTCTTCTGAGAAGAAATCAAAACTTTTATAG
GTATTTTTACTATAGAGATAGAATTCATAAAATGCTATGATGTTTGTTTTCCAAAATACA
TCATCACTGTGCATACTAATAATGGTTTATGACTTCTGGCAAGGAAGACAGAAGTTAAAA
ATAACCTACATATAATTTTACTGGTTTTCTATGTTAATAA..........

Sequence Detail Report

Gene Symbol (Gene ID) Slc9a2 (ENSMUSG00000026062)
Transcript ID ENSMUST00000027231
SNP Information
Strain :
Sequence Retrieve :
Exon translate :
CDS Start ( 1 ) - End ( 815 )
-
Strand : forward reverse
Show sequence : nucleotide amino acid
Color information