| Reports |
| substitution |
| cSNPs | 7 |
| Insertion | 37 |
| Deletion | 41 |
| SNPs |
-1kb
40079968(c.-22461A>G),
40079980(c.-22449A>G),
40079995(c.-22434T>C),
40080001(c.-22428A>G),
40080020(c.-22409A>T),
40080251(c.-22178T>G),
40080261(c.-22168T>C),
40080284(c.-22145C>T),
40080441(c.-21988C>T),
40080446(c.-21983G>A),
40080448(c.-21981C>T),
40080675(c.-21754G>A),
40080685(c.-21744C>T),
40080726(c.-21703T>C),
40080790(c.-21639T>C),
40080794(c.-21635G>A),
40080978(c.-21451T>C),
40081222(c.-21207A>G),
40081361(c.-21068A>G),
40081392(c.-21037G>A),
40081509(c.-20920T>C),
40081605(c.-20824C>T),
40081613(c.-20816C>A),
40081665(c.-20764C>T),
40081715(c.-20714T>C),
40081789(c.-20640A>G),
40082125(c.-20304A>G),
40082205(c.-20224C>A),
40082274(c.-20155T>C),
40082438(c.-19991T>C),
40082502(c.-19927T>C),
40082598(c.-19831T>A),
40083133(c.-19296G>C),
40083446(c.-18983A>C),
40083548(c.-18881A>G),
40083565(c.-18864G>A),
40083705(c.-18724G>T),
40083723(c.-18706C>T),
40083793(c.-18636T>G),
40083824(c.-18605G>C),
40083851(c.-18578G>A),
40083925(c.-18504A>G),
40084044(c.-18385A>C),
40084047(c.-18382A>G),
40084111(c.-18318C>T),
40084124(c.-18305C>T),
40084321(c.-18108G>A),
40084610(c.-17819C>T),
5'UTR
CDS
3'UTR
INTRON
40084894(c.-41+75G>C),
40084905(c.-41+86G>A),
40085062(c.-41+243T>C),
40085107(c.-41+288A>G),
40085135(c.-41+316G>A),
40085186(c.-41+367A>G),
40085225(c.-41+406T>A),
40085342(c.-41+523T>C),
40085348(c.-41+529T>A),
40085380(c.-41+561T>C),
40085381(c.-41+562A>T),
40085594(c.-41+775T>A),
40085595(c.-41+776C>T),
40085630(c.-41+811G>A),
40085699(c.-41+880G>A),
40085725(c.-41+906T>C),
40085882(c.-41+1063G>T),
40085888(c.-41+1069C>A),
40085892(c.-41+1073G>A),
40085894(c.-41+1075A>C),
40085973(c.-41+1154G>C),
40086091(c.-41+1272T>C),
40086241(c.-41+1422T>G),
40086307(c.-41+1488C>T),
40086325(c.-41+1506G>A),
40086377(c.-41+1558A>G),
40086395(c.-41+1576A>G),
40086400(c.-41+1581G>C),
40086638(c.-41+1819A>C),
40086704(c.-41+1885G>A),
40086726(c.-41+1907A>G),
40086871(c.-41+2052C>T),
40086918(c.-41+2099A>G),
40087302(c.-41+2483G>A),
40087568(c.-41+2749G>A),
40087579(c.-41+2760A>G),
40088411(c.-41+3592T>C),
40088627(c.-41+3808T>A),
40088674(c.-41+3855A>G),
40089410(c.-41+4591G>A),
40089520(c.-41+4701C>T),
40089768(c.-41+4949C>T),
40090087(c.-41+5268T>C),
40090159(c.-41+5340G>A),
40090195(c.-41+5376C>T),
40090282(c.-41+5463T>C),
40090314(c.-41+5495C>T),
40090322(c.-41+5503A>G),
40090454(c.-41+5635T>C),
40090457(c.-41+5638G>T),
40090605(c.-41+5786C>T),
40090782(c.-41+5963G>A),
40090883(c.-41+6064C>T),
40090932(c.-41+6113T>C),
40091061(c.-41+6242A>G),
40091104(c.-41+6285C>T),
40091241(c.-41+6422G>A),
40091331(c.-41+6512T>C),
40091333(c.-41+6514A>T),
40091341(c.-41+6522T>G),
40091774(c.-41+6955T>C),
40091801(c.-41+6982C>T),
40091896(c.-41+7077T>C),
40092130(c.-41+7311G>A),
40092297(c.-41+7478C>T),
40092305(c.-41+7486T>C),
40092307(c.-41+7488A>G),
40092849(c.-41+8030G>A),
40093169(c.-41+8350A>G),
40093420(c.-41+8601G>A),
40093814(c.-40-8575T>C),
40093816(c.-40-8573A>C),
40093848(c.-40-8541T>C),
40093854(c.-40-8535G>C),
40094540(c.-40-7849T>C),
40094578(c.-40-7811A>C),
40094586(c.-40-7803C>T),
40094591(c.-40-7798C>G),
40094604(c.-40-7785C>T),
40094751(c.-40-7638A>G),
40095016(c.-40-7373G>A),
40095023(c.-40-7366T>C),
40095143(c.-40-7246C>T),
40095163(c.-40-7226A>G),
40095168(c.-40-7221C>A),
40095230(c.-40-7159A>G),
40095281(c.-40-7108A>C),
40095301(c.-40-7088A>G),
40095409(c.-40-6980C>T),
40095410(c.-40-6979A>G),
40095483(c.-40-6906A>C),
40095498(c.-40-6891A>G),
40095514(c.-40-6875A>G),
40095555(c.-40-6834G>A),
40095565(c.-40-6824G>A),
40095591(c.-40-6798A>G),
40095594(c.-40-6795T>C),
40095616(c.-40-6773C>A),
40095674(c.-40-6715A>G),
40095954(c.-40-6435G>C),
40096476(c.-40-5913C>T),
40096477(c.-40-5912C>T),
40097148(c.-40-5241A>T),
40097229(c.-40-5160C>T),
40097249(c.-40-5140T>C),
40097306(c.-40-5083A>G),
40097359(c.-40-5030C>G),
40097371(c.-40-5018C>G),
40097397(c.-40-4992C>T),
40097487(c.-40-4902G>A),
40097573(c.-40-4816G>T),
40097702(c.-40-4687T>C),
40097704(c.-40-4685G>C),
40098099(c.-40-4290C>G),
40098131(c.-40-4258C>T),
40098174(c.-40-4215A>G),
40098293(c.-40-4096A>C),
40098675(c.-40-3714C>T),
40099011(c.-40-3378G>T),
40099039(c.-40-3350A>G),
40099150(c.-40-3239C>A),
40099186(c.-40-3203C>T),
40099229(c.-40-3160T>C),
40099302(c.-40-3087C>T),
40099395(c.-40-2994C>T),
40099396(c.-40-2993A>G),
40099428(c.-40-2961T>C),
40099460(c.-40-2929T>A),
40099580(c.-40-2809A>G),
40099591(c.-40-2798G>A),
40099829(c.-40-2560T>C),
40099942(c.-40-2447C>T),
40099961(c.-40-2428T>C),
40100086(c.-40-2303T>A),
40100115(c.-40-2274G>A),
40100157(c.-40-2232C>T),
40100161(c.-40-2228G>T),
40100190(c.-40-2199A>G),
40100218(c.-40-2171C>A),
40100447(c.-40-1942C>T),
40100547(c.-40-1842G>T),
40100582(c.-40-1807C>G),
40100584(c.-40-1805C>G),
40100600(c.-40-1789A>G),
40100634(c.-40-1755C>T),
40100893(c.-40-1496G>T),
40101125(c.-40-1264T>C),
40101434(c.-40-955C>T),
40101451(c.-40-938A>C),
40101500(c.-40-889C>T),
40101552(c.-40-837T>C),
40101883(c.-40-506A>G),
40101908(c.-40-481C>T),
40101909(c.-40-480A>G),
40101920(c.-40-469C>T),
40101944(c.-40-445C>T),
40101955(c.-40-434T>G),
40102057(c.-40-332T>C),
40102377(c.-40-12C>T),
40102546(c.109+9T>C),
40102633(c.109+96C>A),
40102650(c.109+113A>G),
40102664(c.109+127T>C),
40102665(c.109+128G>C),
40102675(c.109+138T>G),
40102719(c.109+182G>A),
40102788(c.109+251A>G),
40102881(c.109+344G>T),
40102896(c.109+359G>T),
40102897(c.109+360A>T),
40102901(c.109+364T>A),
40102970(c.109+433G>T),
40103001(c.109+464C>T),
40103011(c.109+474C>T),
40103098(c.109+561G>T),
40103113(c.109+576G>T),
40103121(c.109+584T>A),
40103154(c.109+617A>C),
40103165(c.109+628A>G),
40103199(c.109+662A>G),
40103201(c.109+664G>T),
40103227(c.109+690G>A),
40103230(c.109+693C>A),
40103241(c.109+704C>T),
40103252(c.109+715G>A),
40103286(c.109+749G>A),
40103433(c.109+896G>A),
40103435(c.109+898T>G),
40103553(c.109+1016T>C),
40103612(c.109+1075T>C),
40103672(c.109+1135T>C),
40103732(c.109+1195C>T),
40103733(c.109+1196C>T),
40103738(c.109+1201G>T),
40103893(c.109+1356A>G),
40103919(c.110-1345G>A),
40104002(c.110-1262G>A),
40104033(c.110-1231G>A),
40104076(c.110-1188G>A),
40104248(c.110-1016G>A),
40105707(c.368+185T>C),
40105987(c.368+465G>A),
40106064(c.368+542C>T),
40106305(c.368+783T>G),
40106471(c.368+949C>T),
40106599(c.368+1077G>A),
40106916(c.368+1394A>G),
40107040(c.368+1518G>A),
40107158(c.368+1636A>G),
40107202(c.368+1680C>T),
40107210(c.368+1688A>G),
40107228(c.368+1706T>C),
40107288(c.368+1766C>T),
40107375(c.368+1853T>C),
40107385(c.368+1863A>T),
40107426(c.368+1904G>C),
40107453(c.368+1931T>C),
40107561(c.368+2039C>T),
40107586(c.368+2064G>A),
40107740(c.368+2218C>T),
40107817(c.368+2295T>C),
40107998(c.368+2476G>A),
40108002(c.368+2480G>A),
40108238(c.368+2716A>C),
40108261(c.368+2739C>T),
40108340(c.368+2818T>A),
40108423(c.368+2901T>C),
40108719(c.368+3197T>C),
40109002(c.369-2953T>C),
40109005(c.369-2950C>T),
40109023(c.369-2932G>C),
40109051(c.369-2904C>A),
40109064(c.369-2891A>T),
40109099(c.369-2856C>T),
40109189(c.369-2766C>T),
40109256(c.369-2699T>C),
40109268(c.369-2687A>T),
40109313(c.369-2642C>T),
40109585(c.369-2370C>T),
40109689(c.369-2266A>G),
40109776(c.369-2179G>C),
40109777(c.369-2178T>C),
40109819(c.369-2136A>G),
40109923(c.369-2032T>C),
40110093(c.369-1862G>T),
40110325(c.369-1630C>T),
40110522(c.369-1433C>A),
40110523(c.369-1432C>G),
40110553(c.369-1402T>A),
40110684(c.369-1271A>T),
40110713(c.369-1242C>T),
40110721(c.369-1234T>C),
40110761(c.369-1194C>T),
40110780(c.369-1175A>G),
40110923(c.369-1032T>A),
40110941(c.369-1014G>A),
40110954(c.369-1001C>T),
40111056(c.369-899A>G),
40111059(c.369-896G>C),
40111816(c.369-139T>A),
40111817(c.369-138C>A),
40111838(c.369-117T>A),
40111863(c.369-92G>A),
40112204(c.549+69A>G),
40112234(c.549+99T>C),
40112295(c.549+160T>G),
40112520(c.549+385T>G),
40112567(c.549+432C>T),
40112609(c.549+474A>G),
40112707(c.549+572A>G),
40112745(c.549+610C>G),
40112774(c.549+639C>T),
40112779(c.549+644T>C),
40112781(c.549+646T>C),
40112844(c.549+709T>A),
40112902(c.549+767G>T),
40112908(c.549+773T>C),
40112959(c.549+824C>T),
40113357(c.549+1222C>T),
40113382(c.549+1247T>C),
40113580(c.550-1444A>G),
40113641(c.550-1383A>G),
40114261(c.550-763T>C),
40114393(c.550-631G>A),
40114498(c.550-526C>T),
40114586(c.550-438G>A),
40114599(c.550-425T>G),
40114620(c.550-404G>T),
40114762(c.550-262C>T),
40114763(c.550-261T>C),
40114872(c.550-152G>A),
40114936(c.550-88G>A),
40114979(c.550-45C>T),
40115350(c.724+152A>G),
40115457(c.724+259C>T),
40115631(c.724+433T>G),
40115668(c.724+470T>C),
40116048(c.724+850G>T),
40116183(c.724+985C>G),
40116210(c.724+1012C>T),
40116340(c.724+1142A>G),
40116350(c.724+1152T>C),
40116415(c.724+1217G>A),
40116493(c.724+1295C>G),
40116498(c.724+1300T>C),
40116590(c.725-1365G>A),
40116685(c.725-1270C>T),
40117283(c.725-672T>C),
40117422(c.725-533T>C),
40117432(c.725-523C>A),
40117939(c.725-16C>T),
40119987(c.788-922G>A),
40120046(c.788-863T>C),
40120128(c.788-781A>C),
40120131(c.788-778A>G),
40120136(c.788-773G>A),
40120139(c.788-770T>G),
40120225(c.788-684T>C),
40120562(c.788-347T>G),
40120580(c.788-329G>A),
40120590(c.788-319A>G),
40120614(c.788-295T>C),
40120643(c.788-266A>G),
40120731(c.788-178T>C),
40120855(c.788-54C>T),
40120870(c.788-39A>G),
40120880(c.788-29A>G),
40121124(c.923+80C>T),
40121160(c.923+116T>A),
40121176(c.923+132T>C),
40121279(c.923+235G>T),
40121324(c.923+280T>C),
40121330(c.923+286G>A),
40121387(c.923+343G>A),
40121430(c.923+386C>T),
40122051(c.923+1007T>C),
40122159(c.924-963T>A),
40122237(c.924-885A>G),
40122437(c.924-685G>A),
40122731(c.924-391T>C),
40123344(c.1066+80A>G),
40124257(c.1067-784G>A),
40124526(c.1067-515A>C),
40124584(c.1067-457C>T),
+1kb
40125319(c.*112T>G),
40125352(c.*145G>A),
40125387(c.*180T>C),
40125521(c.*314C>T),
40125554(c.*347G>A),
40125559(c.*352C>T),
40125619(c.*412A>T),
40125705(c.*498T>C),
40125723(c.*516C>T),
40125782(c.*575A>G),
40125860(c.*653G>T),
40125873(c.*666G>A),
40125874(c.*667C>G),
40125890(c.*683T>C),
40125898(c.*691T>A),
40125913(c.*706G>A),
40126001(c.*794T>C),
40126072(c.*865C>T),
40126077(c.*870C>T),
40126313(c.*1106C>T),
40126613(c.*1406C>T),
40126758(c.*1551G>C),
40126883(c.*1676A>G),
40127034(c.*1827C>A),
40127227(c.*2020T>C),
40127295(c.*2088G>A),
40127314(c.*2107A>T),
40127319(c.*2112T>C),
40127384(c.*2177T>G),
40127465(c.*2258T>G),
40127475(c.*2268T>A),
40127846(c.*2639G>A),
40127852(c.*2645A>T),
40127856(c.*2649A>G),
40128326(c.*3119A>G),
40128466(c.*3259A>G),
40128487(c.*3280C>A),
40128526(c.*3319C>A),
40128574(c.*3367A>G),
40128594(c.*3387C>T),
40128644(c.*3437T>C),
40128896(c.*3689A>G),
40128898(c.*3691G>A),
40129309(c.*4102T>C),
40129327(c.*4120C>T),
40129383(c.*4176G>A),
40129499(c.*4292C>T),
40129530(c.*4323C>T),
40129548(c.*4341A>T),
40129554(c.*4347A>C),
40129637(c.*4430G>A),
40129814(c.*4607A>C),
40130011(c.*4804C>A),
40130012(c.*4805A>T),
40130015(c.*4808T>C),
40130119(c.*4912A>G),
|
| Insertions |
-1kb
5'UTR
CDS
3'UTR
INTRON
40085399 (c.-41+583dupC),
40085401 (c.-41+583dupC),
40087072 (c.-41+2254dupT),
40090649 (c.-41+5833_-41+5835dupCTA),
40093827 (c.-40-8562_-40-8561insAA),
40094952 (c.-40-7436_-40-7435dupAG),
40097309 (c.-40-5079_-40-5078insAA),
40099109 (c.-40-3279_-40-3278insAT),
40100086 (c.-40-2302_-40-2301insAAG),
40100950 (c.-40-1424_-40-1423dupTT),
40101455 (c.-40-934dupG),
40101894 (c.-40-495_-40-494insA),
40102015 (c.-40-373_-40-371dupACT),
40107253 (c.368+1733_368+1734insGGA),
40109019 (c.369-2936_369-2935insAAG),
40109527 (c.369-2428_369-2427insGTCAT),
40109713 (c.369-2235dupA),
40110625 (c.369-1330_369-1329insC),
40111098 (c.369-850dupT),
40113031 (c.549+896_549+897insCACACAC),
40113348 (c.549+1214_549+1215insTATT),
40114464 (c.550-560dupT),
40114565 (c.550-459_550-458insGC),
40120699 (c.788-209_788-208insCCCGAG),
40121387 (c.923+351dupT),
40121394 (c.923+351dupT),
40123404 (c.1066+137_1066+140dupTGTG),
+1kb
|
| Deletions |
-1kb
5'UTR
CDS
3'UTR
INTRON
40085028 (c.-41+210_-41+212delGGG),
40085334 (c.-41+516delT),
40085954 (c.-41+1136_-41+1144delAGCAGAAGC),
40086073 (c.-41+1266_-41+1272delTTTTTTT),
40089064 (c.-41+4255delT),
40090400 (c.-41+5582delT),
40090909 (c.-41+6092_-41+6095delGTGG),
40091070 (c.-41+6254delA),
40094316 (c.-40-8072_-40-8071delCC),
40094522 (c.-40-7859_-40-7856delCTCT),
40096603 (c.-40-5785_-40-5782delCGCA),
40101236 (c.-40-1137_-40-1131delAGGGTGG),
40103792 (c.109+1256delG),
40103818 (c.109+1285delC),
40103821 (c.109+1285delC),
40104519 (c.110-740_110-736delTCCCC),
40105593 (c.368+74_368+75delCA),
40106150 (c.368+632_368+635delTACT),
40107850 (c.368+2337delT),
40109055 (c.369-2899_369-2897delGAA),
40111809 (c.369-141delA),
40113012 (c.549+878_549+879delGT),
40113614 (c.550-1404delC),
40114484 (c.550-539_550-538delTA),
40114703 (c.550-320delT),
40114725 (c.550-298_550-296delTTT),
40119803 (c.788-1105_788-1098delCCACCACC),
40121144 (c.923+106_923+107delTA),
40121335 (c.923+292delA),
40121972 (c.923+931delG),
40123054 (c.924-52_924-49delACAT),
40123870 (c.1066+613delC),
+1kb
|
| coding sequence substitutions |
| premature termination by the nucleotide substitution | 0 |
| synonymous num | 4 |
| non-synonymous num | 3 |
| synonymous substitutions |
40102437 (p.Ile3Ile),
40102458 (p.Gly10Gly),
40105508 (p.Tyr118Tyr),
40112063 (p.Thr159Thr),
|
| non-synonymous substitutions |
40105463 (p.Asn103Lys),
40115082 (p.Arg203His),
40125184 (p.Asp404Asn),
|
B6 transcript
(ENSMUST00000027243)
|
MFILLVLVTGVSAFTTPTVVHTGKVSESPITSEKPTVHGDNCQFRGREFKSELRLEGEPV
VLRCPLAPHSDISSSSHSFLTWSKLDSSQLIPRDEPRMWVKGNILWILPAVQQDSGTYIC
TFRNASHCEQMSVELKVFKNTEASLPHVSYLQISALSTTGLLVCPDLKEFISSNADGKIQ
WYKGAILLDKGNKEFLSAGDPTRLLISNTSMDDAGYYRCVMTFTYNGQEYNITRNIELRV
KGTTTEPIPVIISPLETIPASLGSRLIVPCKVFLGTGTSSNTIVWWLANSTFISAAYPRG
RVTEGLHHQYSENDENYVEVSLIFDPVTREDLHTDFKCVASNPRSSQSLHTTVKEVSSTF
SWSIALAPLSLIILVVGAIWMRRRCKRRAGKTYGLTKLRTDNQDFPSSPN*
|
|
MSMv4 transcript
|
MFILLVLVTGVSAFTTPTVVHTGKVSESPITSEKPTVHGDNCQFRGREFKSELRLEGEPV
VLRCPLAPHSDISSSSHSFLTWSKLDSSQLIPRDEPRMWVKGKILWILPAVQQDSGTYIC
TFRNASHCEQMSVELKVFKNTEASLPHVSYLQISALSTTGLLVCPDLKEFISSNADGKIQ
WYKGAILLDKGNKEFLSAGDPTHLLISNTSMDDAGYYRCVMTFTYNGQEYNITRNIELRV
KGTTTEPIPVIISPLETIPASLGSRLIVPCKVFLGTGTSSNTIVWWLANSTFISAAYPRG
RVTEGLHHQYSENDENYVEVSLIFDPVTREDLHTDFKCVASNPRSSQSLHTTVKEVSSTF
SWSIALAPLSLIILVVGAIWMRRRCKRRAGKTYGLTKLRTDNQNFPSSPN*
|
| homology | 99.27 (411 / 411) |
|