MoG+ -Mouse Genome database with high added value-

Target CDS Information

Gene Symbol (Gene ID)

Il6ra (ENSMUSG00000027947)

Cross Reference

CCDS	CCDS38496.1
EMBL	X51975, X53802
GO	GO:0004897, GO:0004897, GO:0004915, ...show all
goslim_goa	GO:0003674, GO:0004871, GO:0005575, ...show all
MGI_trans_name	Il6ra-201
protein_id	CAA36237.1, CAA37810.1
Reactome	R-MMU-1059683, R-MMU-110056, R-MMU-112409, ...show all
RefSeq_mRNA	NM_010559.2
RefSeq_peptide	NP_034689
UCSC	uc008qaf.1

UniParc	UPI0000022D4B
Uniprot/SWISSPROT	P22272

Definition

protein_id:ENSMUSP00000029559
translation:

MLTVGCTLLVALLAAPAVALVLGSCRALEVANGTVTSLPGATVTLICPGKEAAGNVTIHW
VYSGSQNREWTTTGNTLVLRDVQLSDTGDYLCSLNDHLVGTVPLLVDVPPEEPKLSCFRK
NPLVNAICEWRPSSTPSPTTKAVLFAKKINTTNGKSDFQVPCQYSQQLKSFSCQVEILEG
DKVYHIVSLCVANSVGSKSSHNEAFHSLKMVQPDPPANLVVSAIPGRPRWLKVSWQHPET
WDPSYYLLQFQLRYRPVWSKEFTVLLLPVAQYQCVIHDALRGVKHVVQVRGKEELDLGQW
SEWSPEVTGTPWIAEPRTTPAGILWNPTQVSVEDSANHEDQYESSTEATSVLAPVQESSS
MSLPTFLVAGGSLAFGLLLCVFIILRLKQKWKSEAEKESKTTSPPPPPYSLGPLKPTFLL
VPLLTPHSSGSDNTVNHSCLGVRDAQSPYDNSNRDYLFPR

Chromosome

Length
Position(start - end)

41,877
89,871,161 - 89,913,039

Orient to Chromosome

minus

Link

Location : (3:89871161-89913039)
/

Detail Map

name	Il6ra (ENSMUSG00000027947)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : Il6ra note : interleukin 6 receptor, alpha [Source:MGI Symbol;Acc:MGI:105304]

name	RP24-122I22.6 (ENSMUSG00000105941)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : RP24-122I22.6

name	Il6ra (ENSMUSG00000027947)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000197679

name	Il6ra (ENSMUSG00000027947)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000029559

name	Il6ra (ENSMUSG00000027947) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	RefSeq_peptide:NP_001297605.1 Vega_transcript:Il6ra-001 Vega_transcript:OTTMUST00000132340 Uniprot/SPTREMBL:A0A0G2JGF1 UCSC:uc008qag.1 EMBL:AC102392 GO:GO:0004896 GO:GO:0016020 GO:GO:0019221 MGI_trans_name:Il6ra-001 Vega_translation:187748 Vega_translation:OTTMUSP00000070563 goslim_goa:GO:0003674 goslim_goa:GO:0004871 goslim_goa:GO:0005575 goslim_goa:GO:0007165 goslim_goa:GO:0008150 OTTP:OTTMUSP00000070563 OTTT:OTTMUST00000132340 UniParc:UPI0000F4DE1D
definition	note : transcript_id=ENSMUST00000197679 protein_id : ENSMUSP00000143541 translation : MLTVGCTLLVALLAAPAVALVLGSCRALEVANGTVTSLPGATVTLICPGKEAAGNVTIHWVYSGSQNREWTTTGNTLVLRDVQLSDTGDYLCSLNDHLVGTVPLLVDVPPEEPKLSCFRKNPLVNAICEWRPSSTPSPTTKAVLFAKKINTTNGKSDFQVPCQYSQQLKSFSCQVEILEGDKVYHIVSLCVANSVGSKSSHNEAFHSLKMVQPDPPANLVVSAIPGRPRWLKVSWQHPETWDPSYYLLQFQLRYRPVWSKEFTVLLLPVAQYQCVIHDALRGVKHVVQVRGKEELDLGQWSEWSPEVTGTPWIEPRTTPAGILWNPTQVSVEDSANHEDQYESSTEATSVLAPVQESSSMSLPTFLVAGGSLAFGLLLCVFIILRLKQKWKSEAEKESKTTSPPPPPYSLGPLKPTFLLVPLLTPHSSGSDNTVNHSCLGVRDAQSPYDNSNRDYLFPR

name	Il6ra (ENSMUSG00000027947) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS38496.1 Uniprot/SWISSPROT:P22272 RefSeq_peptide:NP_034689 RefSeq_mRNA:NM_010559.2 UCSC:uc008qaf.1 EMBL:X51975 EMBL:X53802 GO:GO:0004897 GO:GO:0004897 GO:GO:0004915 GO:GO:0004915 GO:GO:0004915 GO:GO:0005138 GO:GO:0005138 GO:GO:0005576 GO:GO:0005576 GO:GO:0005615 GO:GO:0005615 GO:GO:0005615 GO:GO:0005896 GO:GO:0005896 GO:GO:0008284 GO:GO:0008284 GO:GO:0008284 GO:GO:0009986 GO:GO:0010332 GO:GO:0010536 GO:GO:0010536 GO:GO:0016049 GO:GO:0016324 GO:GO:0016324 GO:GO:0019221 GO:GO:0019221 GO:GO:0019899 GO:GO:0019899 GO:GO:0019981 GO:GO:0019981 GO:GO:0031018 GO:GO:0032496 GO:GO:0032722 GO:GO:0032722 GO:GO:0032755 GO:GO:0032755 GO:GO:0032809 GO:GO:0032966 GO:GO:0032966 GO:GO:0034097 GO:GO:0034097 GO:GO:0042517 GO:GO:0042517 GO:GO:0042517 GO:GO:0042803 GO:GO:0042803 GO:GO:0043410 GO:GO:0043410 GO:GO:0043434 GO:GO:0045471 GO:GO:0046427 GO:GO:0048661 GO:GO:0048661 GO:GO:0050731 GO:GO:0050731 GO:GO:0051384 GO:GO:0051591 GO:GO:0070102 GO:GO:0070102 GO:GO:0070110 GO:GO:0070110 GO:GO:0070119 GO:GO:0070119 GO:GO:0070120 GO:GO:0070120 MGI_trans_name:Il6ra-201 goslim_goa:GO:0003674 goslim_goa:GO:0004871 goslim_goa:GO:0005575 goslim_goa:GO:0005576 goslim_goa:GO:0005615 goslim_goa:GO:0005623 goslim_goa:GO:0005886 goslim_goa:GO:0007165 goslim_goa:GO:0008150 goslim_goa:GO:0019899 goslim_goa:GO:0043234 goslim_goa:GO:0048856 protein_id:CAA36237.1 protein_id:CAA37810.1 Reactome:R-MMU-1059683 Reactome:R-MMU-110056 Reactome:R-MMU-112409 Reactome:R-MMU-112411 Reactome:R-MMU-1280215 Reactome:R-MMU-162582 Reactome:R-MMU-168256 Reactome:R-MMU-449147 Reactome:R-MMU-5683057 Reactome:R-MMU-5684996 UniParc:UPI0000022D4B
definition	note : transcript_id=ENSMUST00000029559 protein_id : ENSMUSP00000029559 translation : MLTVGCTLLVALLAAPAVALVLGSCRALEVANGTVTSLPGATVTLICPGKEAAGNVTIHWVYSGSQNREWTTTGNTLVLRDVQLSDTGDYLCSLNDHLVGTVPLLVDVPPEEPKLSCFRKNPLVNAICEWRPSSTPSPTTKAVLFAKKINTTNGKSDFQVPCQYSQQLKSFSCQVEILEGDKVYHIVSLCVANSVGSKSSHNEAFHSLKMVQPDPPANLVVSAIPGRPRWLKVSWQHPETWDPSYYLLQFQLRYRPVWSKEFTVLLLPVAQYQCVIHDALRGVKHVVQVRGKEELDLGQWSEWSPEVTGTPWIAEPRTTPAGILWNPTQVSVEDSANHEDQYESSTEATSVLAPVQESSSMSLPTFLVAGGSLAFGLLLCVFIILRLKQKWKSEAEKESKTTSPPPPPYSLGPLKPTFLLVPLLTPHSSGSDNTVNHSCLGVRDAQSPYDNSNRDYLFPR

name
type	STS
link
xref	UniSTS_NUM:178862 UniSTS:X51975
definition	note : map_weight=1 standard_name : X51975

name
type	misc_feature
link
xref
definition	note : contig AC102392.8 1..179806(-1)

name	RP24-122I22.6 (ENSMUSG00000105941)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000132341 Vega_transcript:OTTMUST00000132341 Clone_based_vega_transcript:RP24-122I22.6-001 OTTT:OTTMUST00000132341 RNACentral:URS0000811E4F
definition	note : antisense note : transcript_id=ENSMUST00000198429

Polymorphisms Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Il6ra (ENSMUSG00000027947)
Transcript ID	ENSMUST00000029559

Reports
substitution
cSNPs	6
Insertion	48
Deletion	47
SNPs	+1kb 89913251(c.-212A>G), 89913300(c.-261G>A), 89913468(c.-429T>G), 89913511(c.-472C>G), 89913712(c.-673T>C), 89913891(c.-852C>T), 89913946(c.-907T>G), 89914035(c.-996T>C), 89914345(c.-1306T>G), 89914500(c.-1461T>C), 89914506(c.-1467C>T), 89914536(c.-1497A>G), 89914626(c.-1587A>G), 89914648(c.-1609C>A), 89914662(c.-1623T>C), 89914674(c.-1635T>C), 89914942(c.-1903G>A), 89915028(c.-1989C>G), 89915048(c.-2009G>C), 89915234(c.-2195G>A), 89915294(c.-2255G>C), 89915320(c.-2281T>C), 89915393(c.-2354A>G), 89915440(c.-2401T>C), 89915457(c.-2418G>A), 89915641(c.-2602A>C), 89915826(c.-2787A>G), 89916033(c.-2994G>A), 89916148(c.-3109G>A), 89916174(c.-3135C>T), 89916201(c.-3162G>A), 89916292(c.-3253G>A), 89916336(c.-3297C>G), 89916366(c.-3327A>G), 89916374(c.-3335G>T), 89916438(c.-3399C>T), 89916547(c.-3508A>G), 89916557(c.-3518G>A), 89916587(c.-3548T>C), 89917093(c.-4054G>C), 89917189(c.-4150A>G), 89917195(c.-4156A>G), 89917218(c.-4179C>A), 89917412(c.-4373T>G), 89917459(c.-4420C>T), 89917550(c.-4511T>G), 89917659(c.-4620C>T), 89917706(c.-4667G>T), 89917717(c.-4678A>T), 89917725(c.-4686G>T), 89917735(c.-4696G>A), 89917746(c.-4707C>T), 89917757(c.-4718A>G), 89917881(c.-4842A>G), 89918097(c.-5058A>C), 5'UTR 89913074(c.-35C>T), CDS 89885977(c.865G>A), 89887047(c.606C>T), 89887167(c.486T>C), 89887194(c.459C>T), 89890354(c.205G>A), 89890394(c.165T>C), 3'UTR 89869441(c.1720A>G), 89869568(c.1593C>G), 89869621(c.1540C>A), 89869825(c.1336T>C), 89870048(c.1113C>A), 89870050(c.1111A>C), 89870055(c.1106C>A), 89870057(c.1104A>C), 89870061(c.1100C>A), 89870062(c.1099A>C), 89870080(c.1081T>C), INTRON 89871573(c.1158-187G>A), 89872338(c.1158-952T>C), 89872514(c.1158-1128T>C), 89872597(c.1158-1211A>G), 89872637(c.1158-1251G>A), 89872641(c.1158-1255A>G), 89872648(c.1158-1262C>T), 89872669(c.1158-1283G>A), 89872674(c.1158-1288A>G), 89872850(c.1158-1464G>T), 89872858(c.1158-1472G>A), 89872910(c.1158-1524C>A), 89872932(c.1158-1546T>C), 89873034(c.1158-1648C>T), 89873559(c.1158-2173A>G), 89873636(c.1158-2250C>T), 89873664(c.1158-2278G>A), 89874240(c.1157+2569T>C), 89874279(c.1157+2530C>G), 89874343(c.1157+2466T>C), 89874410(c.1157+2399T>C), 89874430(c.1157+2379C>T), 89874431(c.1157+2378A>G), 89874634(c.1157+2175C>T), 89874668(c.1157+2141T>C), 89874684(c.1157+2125G>A), 89874844(c.1157+1965A>C), 89874875(c.1157+1934G>C), 89874876(c.1157+1933T>C), 89874880(c.1157+1929C>T), 89874885(c.1157+1924G>A), 89874945(c.1157+1864C>T), 89874951(c.1157+1858A>G), 89875058(c.1157+1751A>G), 89875059(c.1157+1750C>T), 89875105(c.1157+1704T>C), 89875392(c.1157+1417T>A), 89875471(c.1157+1338T>C), 89875539(c.1157+1270G>A), 89875915(c.1157+894T>C), 89875923(c.1157+886A>G), 89875925(c.1157+884G>A), 89875928(c.1157+881C>T), 89876707(c.1157+102T>C), 89876773(c.1157+36C>T), 89877017(c.1058-109A>G), 89877103(c.1058-195T>C), 89877425(c.1057+419T>C), 89877457(c.1057+387C>T), 89877583(c.1057+261G>A), 89877604(c.1057+240G>A), 89877750(c.1057+94T>G), 89878091(c.988-178G>A), 89878108(c.988-195T>C), 89878125(c.988-212C>T), 89878189(c.988-276G>A), 89878383(c.987+466T>G), 89878530(c.987+319C>T), 89878532(c.987+317T>C), 89878623(c.987+226T>C), 89878760(c.987+89A>G), 89879077(c.941-182G>A), 89879269(c.941-374A>G), 89879402(c.941-507A>G), 89879762(c.941-867A>G), 89879914(c.941-1019T>A), 89880235(c.941-1340A>G), 89880270(c.941-1375C>T), 89880338(c.941-1443T>C), 89880461(c.941-1566T>C), 89880535(c.941-1640G>T), 89880549(c.941-1654C>T), 89880556(c.941-1661G>T), 89880598(c.941-1703A>G), 89880632(c.941-1737A>C), 89880749(c.941-1854T>C), 89880755(c.941-1860A>T), 89880767(c.941-1872C>T), 89880836(c.941-1941A>T), 89880870(c.941-1975A>G), 89881070(c.941-2175T>C), 89881127(c.941-2232C>A), 89881290(c.941-2395A>G), 89881698(c.941-2803T>C), 89881741(c.941-2846C>G), 89881807(c.941-2912A>C), 89882580(c.940+3322A>C), 89882721(c.940+3181C>G), 89882828(c.940+3074T>C), 89883004(c.940+2898T>C), 89883012(c.940+2890G>T), 89883085(c.940+2817T>G), 89883632(c.940+2270C>T), 89883651(c.940+2251T>C), 89883759(c.940+2143G>A), 89884258(c.940+1644A>G), 89884326(c.940+1576T>C), 89884406(c.940+1496C>T), 89884410(c.940+1492A>G), 89884426(c.940+1476A>G), 89884977(c.940+925T>G), 89885090(c.940+812C>T), 89885227(c.940+675G>A), 89885276(c.940+626T>C), 89885383(c.940+519A>G), 89885384(c.940+518C>T), 89885432(c.940+470T>C), 89885481(c.940+421A>G), 89885522(c.940+380G>A), 89885547(c.940+355C>A), 89885743(c.940+159C>T), 89885754(c.940+148C>T), 89885802(c.940+100T>C), 89885813(c.940+89A>C), 89885843(c.940+59C>T), 89886068(c.799-25A>G), 89886127(c.799-84G>A), 89886152(c.799-109T>C), 89886322(c.798+220C>T), 89886332(c.798+210G>C), 89886425(c.798+117C>T), 89886516(c.798+26A>T), 89886836(c.632-128A>C), 89886917(c.631+105A>G), 89886967(c.631+55A>G), 89886998(c.631+24A>G), 89887368(c.447-162C>T), 89887893(c.447-687A>G), 89887917(c.447-711A>C), 89887918(c.447-712C>T), 89888147(c.447-941T>A), 89888248(c.446+939A>G), 89888250(c.446+937G>C), 89888280(c.446+907G>T), 89888474(c.446+713G>C), 89888911(c.446+276C>G), 89890159(c.322+78T>C), 89891672(c.86-1199G>A), 89891829(c.86-1356A>G), 89893165(c.86-2692G>T), 89893181(c.86-2708G>T), 89893893(c.86-3420G>T), 89894061(c.86-3588A>C), 89894547(c.86-4074G>T), 89894627(c.86-4154A>T), 89894629(c.86-4156A>T), 89894911(c.86-4438C>T), 89894918(c.86-4445G>A), 89894971(c.86-4498G>A), 89895272(c.86-4799C>G), 89895342(c.86-4869T>C), 89895360(c.86-4887T>G), 89895367(c.86-4894C>T), 89895397(c.86-4924G>A), 89895549(c.86-5076C>G), 89895597(c.86-5124C>A), 89895702(c.86-5229G>A), 89895708(c.86-5235C>G), 89895721(c.86-5248T>A), 89895724(c.86-5251A>T), 89895737(c.86-5264T>A), 89895786(c.86-5313T>A), 89895799(c.86-5326C>T), 89895913(c.86-5440A>C), 89896008(c.86-5535C>T), 89896152(c.86-5679T>C), 89896194(c.86-5721A>C), 89896292(c.86-5819C>T), 89896301(c.86-5828G>A), 89896314(c.86-5841T>C), 89896476(c.86-6003A>C), 89896584(c.86-6111A>G), 89896630(c.86-6157T>C), 89896730(c.86-6257G>A), 89896839(c.86-6366G>A), 89896913(c.86-6440A>C), 89896914(c.86-6441T>G), 89896952(c.86-6479A>T), 89897074(c.86-6601T>A), 89897088(c.86-6615T>A), 89897113(c.86-6640G>A), 89897130(c.86-6657T>C), 89897451(c.86-6978C>A), 89897652(c.86-7179T>C), 89897658(c.86-7185A>G), 89897711(c.86-7238G>A), 89897819(c.86-7346A>G), 89897861(c.86-7388T>C), 89897874(c.86-7401T>A), 89897893(c.86-7420A>C), 89898065(c.86-7592C>A), 89898066(c.86-7593A>G), 89898165(c.86-7692T>C), 89898174(c.86-7701C>A), 89898246(c.86-7773G>A), 89898370(c.86-7897C>T), 89898442(c.86-7969C>A), 89898550(c.86-8077A>G), 89898881(c.86-8408T>C), 89898986(c.86-8513C>T), 89899001(c.86-8528C>A), 89899092(c.86-8619A>G), 89899124(c.86-8651A>G), 89899518(c.86-9045T>G), 89899808(c.86-9335T>C), 89899816(c.86-9343G>A), 89899881(c.86-9408G>T), 89899912(c.86-9439C>T), 89900005(c.86-9532T>A), 89900084(c.86-9611A>C), 89900086(c.86-9613G>A), 89900092(c.86-9619A>T), 89900265(c.86-9792A>G), 89900325(c.86-9852G>T), 89900331(c.86-9858T>A), 89900678(c.86-10205C>T), 89900695(c.86-10222T>C), 89900718(c.86-10245C>G), 89900929(c.86-10456G>A), 89900939(c.86-10466T>C), 89900952(c.86-10479G>C), 89901055(c.86-10582T>C), 89901129(c.86-10656A>G), 89901237(c.86-10764T>C), 89901238(c.86-10765A>G), 89901242(c.86-10769G>A), 89901329(c.86-10856G>T), 89901416(c.86-10943G>A), 89901519(c.86-11046C>G), 89901690(c.86-11217T>G), 89901710(c.86-11237G>A), 89902013(c.85+10942C>A), 89902063(c.85+10892T>C), 89903236(c.85+9719G>A), 89903436(c.85+9519G>A), 89903448(c.85+9507A>G), 89903532(c.85+9423T>C), 89903641(c.85+9314A>G), 89903778(c.85+9177T>C), 89904038(c.85+8917C>A), 89904778(c.85+8177A>T), 89904808(c.85+8147A>G), 89904939(c.85+8016C>T), 89904989(c.85+7966A>G), 89905286(c.85+7669C>A), 89905288(c.85+7667C>G), 89905371(c.85+7584C>G), 89905408(c.85+7547C>T), 89905421(c.85+7534C>T), 89905456(c.85+7499C>T), 89905525(c.85+7430A>C), 89905538(c.85+7417G>A), 89905638(c.85+7317G>C), 89905816(c.85+7139C>G), 89905941(c.85+7014C>A), 89905944(c.85+7011G>C), 89905955(c.85+7000C>T), 89906017(c.85+6938G>C), 89906068(c.85+6887T>A), 89906475(c.85+6480T>A), 89906560(c.85+6395A>G), 89908025(c.85+4930T>C), 89908070(c.85+4885T>C), 89908229(c.85+4726C>T), 89908286(c.85+4669C>A), 89908414(c.85+4541T>G), 89908463(c.85+4492A>G), 89908603(c.85+4352G>A), 89908655(c.85+4300T>A), 89909024(c.85+3931C>T), 89909026(c.85+3929A>G), 89909159(c.85+3796C>T), 89909685(c.85+3270A>G), 89909948(c.85+3007C>G), 89910494(c.85+2461T>G), 89910498(c.85+2457T>G), 89910700(c.85+2255T>C), 89911228(c.85+1727G>A), 89911341(c.85+1614C>T), 89911939(c.85+1016G>A), 89912013(c.85+942A>G), 89912137(c.85+818A>G), 89912252(c.85+703A>G), 89912268(c.85+687T>C), -1kb 89864541(c.6620C>T), 89864621(c.6540A>C), 89864705(c.6456G>A), 89864776(c.6385T>C), 89865068(c.6093C>G), 89865070(c.6091T>C), 89865178(c.5983A>G), 89865215(c.5946C>G), 89865337(c.5824T>C), 89865422(c.5739G>A), 89865429(c.5732A>G), 89865432(c.5729G>A), 89865457(c.5704A>G), 89865503(c.5658T>C), 89865512(c.5649T>C), 89865515(c.5646G>C), 89865534(c.5627C>G), 89865654(c.5507C>T), 89865680(c.5481G>A), 89865950(c.5211C>T), 89865965(c.5196G>A), 89865967(c.5194T>C), 89866440(c.4721A>G), 89866454(c.4707G>A), 89866458(c.4703T>G), 89866600(c.4561C>T), 89866601(c.4560C>A), 89866680(c.4481A>G), 89866725(c.4436A>G), 89866777(c.4384T>C), 89867238(c.3923C>G), 89867380(c.3781G>A), 89867500(c.3661G>C), 89868789(c.2372T>C), 89869005(c.2156A>T), 89869151(c.2010G>C), 89869278(c.1883C>T), 89869307(c.*1854C>T),
Insertions	+1kb 89913790 (c.-752dupG), 89914241 (c.-1203_-1202insC), 89914244 (c.-1206_-1205insTT), 89914254 (c.-1216_-1215insT), 89914259 (c.-1221_-1220insT), 89915001 (c.-1963_-1962insACA), 89916392 (c.-3354_-3353insT), 89916405 (c.-3367_-3366insT), 89916568 (c.-3530_-3529insA), 89917233 (c.-4195_-4194insAAC), 89917510 (c.-4472_-4471insAAGT), 89917717 (c.-4679_-4678insCC), 5'UTR CDS 3'UTR 89869426 (c.1734_1735insTT), INTRON 89872752 (c.1158-1367dupA), 89875683 (c.1157+1125dupT), 89878460 (c.987+388_987+389insG), 89879083 (c.941-189_941-188insAA), 89879108 (c.941-214_941-213insA), 89879110 (c.941-216_941-215insA), 89879195 (c.941-301dupT), 89879204 (c.941-310dupT), 89879633 (c.941-741_941-739dupTTT), 89879928 (c.941-1034_941-1033insA), 89882880 (c.940+3021_940+3022insCA), 89883862 (c.940+2039_940+2040insC), 89886746 (c.632-39_632-38insGTACCGT), 89886804 (c.632-97dupG), 89887276 (c.447-71_447-70insGAGCCAA), 89890854 (c.86-382dupT), 89893011 (c.86-2542_86-2539dupGAGA), 89895514 (c.86-5042dupG), 89897144 (c.86-6672dupC), 89899716 (c.86-9244_86-9243insTCAG), 89899749 (c.86-9277_86-9276insGCGT), 89899758 (c.86-9286_86-9285insTG), 89900675 (c.86-10203dupC), 89903835 (c.85+9118_85+9119dupTG), 89905333 (c.85+7621dupT), 89910513 (c.85+2441_85+2442insTTTG), 89911146 (c.85+1808_85+1809insCACACA), 89911874 (c.85+1080_85+1081insCAC), 89911966 (c.85+988_85+989insTTT), -1kb 89866185 (c.4975_4976insA), 89866619 (c.4541_4542insTATA), 89867576 (c.3583_3584dupTT), 89867708 (c.3451_3452dupTT), 89868353 (c.2807_2808insG), 89868407 (c.2753_2754insCCGG),
Deletions	+1kb 89913600 (c.-565_-562delCGAA), 89914623 (c.-1585delA), 89915346 (c.-2308delG), 89916455 (c.-3419_-3417delTTA), 89916766 (c.-3734_-3728delTCAGAGC), 89917257 (c.-4219delA), 5'UTR CDS 3'UTR 89869442 (c.1717_1718delCC), INTRON 89872482 (c.1158-1099_1158-1097delACT), 89872562 (c.1158-1177delG), 89873859 (c.1158-2479_1158-2474delGTGTGT), 89873893 (c.1158-2513_1158-2508delACTCGC), 89874372 (c.1157+2436delC), 89876373 (c.1157+434_1157+435delTG), 89879995 (c.941-1105_941-1101delGTGTG), 89880427 (c.941-1535_941-1533delTCT), 89880815 (c.941-1921delT), 89881658 (c.941-2766_941-2764delCTT), 89881934 (c.941-3041_941-3040delGG), 89881986 (c.941-3094_941-3092delGGG), 89882184 (c.941-3291_941-3290delGG), 89887252 (c.447-47delA), 89888769 (c.446+417delA), 89893796 (c.86-3324delT), 89896588 (c.86-6118_86-6116delTTT), 89896914 (c.86-6442delC), 89897828 (c.86-7357_86-7356delAT), 89898281 (c.86-7809delT), 89899511 (c.86-9044_86-9039delGGAGAT), 89901079 (c.86-10610_86-10607delTGCA), 89901139 (c.86-10669_86-10667delGCG), 89902919 (c.85+10035delT), 89906673 (c.85+6276_85+6281delTCCGCC), 89907727 (c.85+5227delT), 89909026 (c.85+3928delC), 89909213 (c.85+3741delA), 89909550 (c.85+3396_85+3404delGGGGGGTGC), 89910194 (c.85+2758_85+2760delTTC), 89910547 (c.85+2407delA), 89910556 (c.85+2398delA), 89911966 (c.85+988delA), -1kb 89864592 (c.6568delA), 89864649 (c.6511delG), 89864654 (c.6506delG), 89866505 (c.4654_4655delAA), 89866514 (c.4645_4646delAA), 89867249 (c.3906_3911delGCAGAC), 89869153 (c.2005_*2007delTGT),
coding sequence substitutions
premature termination by the nucleotide substitution	0
synonymous num	4
non-synonymous num	2
synonymous substitutions	89887047 (p.Asn202Asn), 89887167 (p.Cys162Cys), 89887194 (p.Asn153Asn), 89890394 (p.Asn55Asn),
non-synonymous substitutions	89885977 (p.Val289Ile), 89890354 (p.Glu69Lys),
B6 transcript (ENSMUST00000029559)	MLTVGCTLLVALLAAPAVALVLGSCRALEVANGTVTSLPGATVTLICPGKEAAGNVTIHW VYSGSQNREWTTTGNTLVLRDVQLSDTGDYLCSLNDHLVGTVPLLVDVPPEEPKLSCFRK NPLVNAICEWRPSSTPSPTTKAVLFAKKINTTNGKSDFQVPCQYSQQLKSFSCQVEILEG DKVYHIVSLCVANSVGSKSSHNEAFHSLKMVQPDPPANLVVSAIPGRPRWLKVSWQHPET WDPSYYLLQFQLRYRPVWSKEFTVLLLPVAQYQCVIHDALRGVKHVVQVRGKEELDLGQW SEWSPEVTGTPWIAEPRTTPAGILWNPTQVSVEDSANHEDQYESSTEATSVLAPVQESSS MSLPTFLVAGGSLAFGLLLCVFIILRLKQKWKSEAEKESKTTSPPPPPYSLGPLKPTFLL VPLLTPHSSGSDNTVNHSCLGVRDAQSPYDNSNRDYLFPR*
MSMv4 transcript	MLTVGCTLLVALLAAPAVALVLGSCRALEVANGTVTSLPGATVTLICPGKEAAGNVTIHW VYSGSQNRKWTTTGNTLVLRDVQLSDTGDYLCSLNDHLVGTVPLLVDVPPEEPKLSCFRK NPLVNAICEWRPSSTPSPTTKAVLFAKKINTTNGKSDFQVPCQYSQQLKSFSCQVEILEG DKVYHIVSLCVANSVGSKSSHNEAFHSLKMVQPDPPANLVVSAIPGRPRWLKVSWQHPET WDPSYYLLQFQLRYRPVWSKEFTVLLLPVAQYQCVIHDALRGVKHVVQIRGKEELDLGQW SEWSPEVTGTPWIAEPRTTPAGILWNPTQVSVEDSANHEDQYESSTEATSVLAPVQESSS MSLPTFLVAGGSLAFGLLLCVFIILRLKQKWKSEAEKESKTTSPPPPPYSLGPLKPTFLL VPLLTPHSSGSDNTVNHSCLGVRDAQSPYDNSNRDYLFPR*
homology	99.57 (461 / 461)

Exon Detail Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Il6ra (ENSMUSG00000027947)
Transcript ID	ENSMUST00000029559


..........ACAGATGGTTGTGAGCTACCATGTTGCTGGGATTTGAACTCATGATCTCC
GGAAGTCAGTCAGTGCGTTTAACCGCTGAGCCATCTCACCAGCCCTAAATTTTCTTTTCA
GTGTGTTTCTTTCCCTCCGCATTTGCATGGGAAGCTGCCCTGTAGCTTCAAGCTCTGTAG
CTTGGAAGGGAACCTTGGTGGAGTCTGGTAAATAGCAAACGCCGGTGCCTTTGTGTCCAG
TCAAGTCATGATGGGTAATCAAAGCCCTACTCCTTGTTGAGTAGTTAGGCTCCAGGTACA
TCGACAGTGTTTCCAGGAATCTTTATCATGGGCTTAAAAATACATCTCTAATAGGTGAGA
AAACTGAGACTTCCGGATCGGGATAGCAATCTTGAGGAGGGTAACACATGTGTCTCTGGG
CCAGACTCAAAAGCGCACACTGGTTTCGTTGCCTCTGCAGCAGCCTTCAAAGAGCTGCTC
CTCCACTGGAAGATGAGAGGAAATCTTTTTCTCAGGTTATGGACGCCTAAGTTTTCCTTC
AGACCAATTAAATCACAATCTCTGGGCTCGAAGCAGACATCGGTGTCTTTTCGGATTCCC
TGTTTGATTCCCGTAAGCACCCAGGACACTGACCTGCCTTCTACTTTAACAGCCAGAGCC
AGTGGCTGGCGCTCATGAAAGCAAAACTCAAGCGGAGGCGCGGAGGGAAGGAAGGAGGGG
GATATTTCTCCTTATCTCAGCGTCAAAACCTGGGGAGGGGCCCTGGTGGGGGTCCCTGGG
GGCTCAGGTGTGGCGCGGCTGCAGGAAGTAACCCCCTCCGGTGGCCCGGAGCGCTGGCCG
ATTGCGCCATCCTACTGGGCTTTCGTAACCGCAAGCCGGGGCTGCCAAGAGGAGCTTCAG
CACCGGTTCCTCAAATGTTTCGCTGTTGCCAGGACGGCCGGCTGCTGTGTGTCACGTGCA
TGTGGGAAGTCGCGCCCACACCGATCTGAGCCACGCCGGGGCGAGCGCTC
GCAGTGCGAGCTGAGTGTGGAGCCCGAGGCCGAGGGCGACTGCTCTCGCTGCCCCAGTCTGCCGGCCGCCCGGCCCCGGCTGCGGAGCTGCTCTGCCGCCCGCCGTCCCGCGTAGAAGGAAGCATGCTGACCGTCGGCTGCACGCTGTTGGTCGCCCTGCTGGCCGCGCCCGCGGTCGCGCTGGTCCTCGGGAGCTGCCGCGCGCTGG
GTAAGAGGAACCCGGAGCGGGCGTG..........CTTACTTTGTGTTTTTCTTCCCCAG
AGGTGGCAAATGGCACAGTGACAAGCCTGCCAGGGGCCACCGTTACCCTGATTTGCCCCGGGAAGGAAGCAGCAGGCAACGTTACCATTCACTGGGTGTACTCTGGCTCACAAAACAGAAAATGGACTACCACAGGAAACACACTGGTTCTGAGGGACGTGCAGCTCAGCGACACTGGGGACTATTTATGCTCCCTGAATGATCACCTGGTGGGGACTGTGCCCTTGCTGGTGGATG
GTGAGTTGTGCTGTCAGTGTCCTTG..........CCTCATCCTGCTGAGTCTCTTGCAG
TTCCCCCAGAGGAGCCCAAGCTCTCCTGCTTCCGGAAGAACCCCCTTGTCAACGCCATCTGTGAGTGGCGTCCGAGCAGCACCCCCTCTCCAACCACGAAGGCTGTGCTGTTTGCAAAGAAAAT
GTAAGTGTCAGGTGGGGCTGTGCAC..........TGCCCTTCTCTGTTGTGTCCCACAG
CAACACCACCAATGGGAAGAGTGACTTCCAGGTGCCCTGCCAGTATTCTCAGCAGCTGAAAAGCTTCTCCTGCCAGGTGGAGATCCTGGAGGGTGACAAAGTATACCACATAGTGTCACTGTGCGTTGCAAACAGTGTGGGAAGCAAGTCCAGCCACAATGAAGCGTTTCACAGCTTAAAAATGG
GTAAGGGAGCTCCCGCTGCAGCTGC..........TAGAAGCCCTATTCCCTCTCCACAG
TGCAGCCGGATCCACCTGCCAACCTTGTGGTATCAGCCATACCTGGAAGGCCGCGCTGGCTCAAAGTCAGCTGGCAGCACCCTGAGACCTGGGACCCGAGTTACTACTTGCTGCAGTTCCAGCTTCGATACCGACCTGTATGGTCAAAGGAGTTCACGGTGTTGCTG
GTAATTCATTTCCTTTGTTTGGAGA..........GGACTCACCATGTCTCCATCCTCAG
CTCCCGGTGGCCCAGTACCAATGCGTCATCCATGATGCCTTGCGAGGAGTGAAGCACGTGGTCCAGATCCGTGGGAAGGAGGAGCTTGACCTTGGCCAGTGGAGCGAATGGTCCCCAGAGGTCACGGGCACTCCTTGGATAG
GTACCTGGGTCTATGTGGAGGGAGG..........AGTCACTAACCCTTCCTTCTACCAG
CAGAGCCCAGGACCACCCCGGCAGGAATCCTCTGGAACCCCACACAG
GTGAGCTTGCCCCCAGAAAGGGCCA..........TGATGGTGAGGGTCATCTCTCCTAG
GTCTCTGTTGAAGACTCTGCCAACCACGAGGATCAGTACGAAAGTTCTACAGAAGCAACGAGTGTCCTCG
GTAAGCGCTAGTGTCTTGCTATTCC..........TATCATTCCCTTCCCCTGCCCACAG
CCCCAGTGCAAGAATCCTCGTCCATGTCCCTGCCCACATTCCTGGTAGCTGGAGGAAGCTTGGCGTTTGGGTTGCTTCTCTGTGTCTTCATCATCCTGAG
GTGAGACGGGTCCTGTACTGTATTG..........TTTGTTTCTCTGTGTTTGTATAAAG
ACTCAAGCAGAAATGGAAGTCAGAGGCTGAGAAGGAAAGCAAGACGACCTCTCCTCCACCCCCACCGTATTCCTTGGGCCCACTGAAGCCGACCTTCCTTCTGGTTCCTCTCCTCACCCCACACAGCTCTGGGTCTGACAATACCGTAAACCACAGCTGCCTGGGTGTCAGGGACGCACAGAGCCCTTATGACAACAGCAACAGAGACTACTTATTCCCCAGATAATCATCTGGATGGTACCTGGCAGCTGGCAGGGCACCACGAGATCAGCACACAAGTTTCTCATGCGGGTCCCATCCACCTGGGGTGGGGTGGGGCGGGCGGGGCTGCAGCTTCACTAACCCACAAGAGCTCTGCACAGGTTCTGAGTAGGTGCAGCTGGTGCTGCATAGGCTCTGAAGGAAGGAAGGGGCTGTGAGGAACACAGGCCATTGTGAAGACAGCTTGTGATGACTGAATAGAGATGCCCGTCAGCTCCACATCTGATAGTGGCTCACAAGCTGCACCCTCAGGAGGCCTCAGAAAGGGGCTCCAAAGGCTGCCCCAGCTGCCTCGCTCTGCCTCACTGCCCCAAGCCACCTTTTAGCTCTCGAACTCCTAAAGTCCAAGCACTTTGCCATTCTCTTTCCGAGGCCACTGAGGCCGGGTGGAAGCTTGGTTCCGATTTCCTTCTCAACATCTGGAAAGCAGCTGGGCCCGGTGGTGGTGACTAATATCTCAGGGCCTGATGGTTTACGCGAGTGACAATTTCTCACAAGCAGTTTTTAAATGTGAATGATGACCCCAGGCACTGCTGGCTGCGGAGGCTTCATTTTCCTCTTCGATCTCAGGACTTCAGGCGAAAAGCGGAGTGGAAGTAGAGAGCGGATGGGTGTCCACCGTCCTCATGGTACTTGCGGGAGGTACAGCCTGGAAAACACGTTTCCTGTCCCCCTACTCTCCCAGGAGAGGGATGATGGTAGGGGGTGCCTCTTCCAGGGCGGAGAGAACTACTTTACCCCAGCCTTGCCCATTCTGATTTCAACTGGACTGGAGCTACTAGGAAAGTCGACATTCATGCAAAAAGAAAAAACGTTAACTAGCAAGAATGCACTTTCATTTTGGTTTTTAGAGAACTGTTGCCTGTTTCTCTCAAGAGTCTGGAAGAGGCCGCTCACTGCACACTACTGTATGAACCCTCACTGCCCACCCTGGAGGACCAAGTGCAGTAACGGTAGCCCAAACACCAAGTCAAGTGAAAATCGAGGGAAAAAAAAAACAAACAAGCAACAAAAAAAAAAAACCAAAACTAAACTAAAAAACAAACCACCCCCCCAAAAAAAACAAAACCAAAAACCAAAAAAAAACAAAAAAACAAAACAACAACAACAAAAAAAACCCAAACCAACCCGCTGTTTCCTATAACAGAAAAGCCTTTGGTTTCATTTTTTATTTTGATTTTTTTGTCTTAAAAAGTATAAAAATAGCCTGTCCATGCTCTGCTTCAGGGAATGAGCCTGTGAACACTCCCAGGCGCAGGCAGGAAGGGTGTCTGCTTCCTGCTACACCTCACTGCCACCTCGGCCTTCCTTGCTTTACGTTTGACTGAGTGGCCTCAGATGCTTTCCCCTGGGGCTTTGAGGAATCCAGTGATGTTAGTGGTCACCGAGGAGACCACAGAGCCACAGTGTGGTGCTTAGATTAAAGTGACTTCTGCAACCACAGCACCCCACACCTGCCGTCTTACTGAACTATGCCAGTAACTTGCCTTTTCTGCCACCACCAAGAGACGAGACGGGCAGAGCTCGGAAGCTGTCACCCCATGCCCTCTGCTTGTCGGCTCTAGGGGCCACTGACCTAAGCATTAGTTATTTTATTTTATTTTATTTTTTTGTGGGTTTTGTACATTTTAGGTCCTGTTGCTGTCTTAGAAAAGGCTCTGTAGGTTGACAGAAAATCAGGCCAAGTATTCATGTTTTGTTTTTTTTTTTTTTCCTTCTTTCCTCCTTTGCTAAGTTTTTGGGACTCAAGGGTAGCAAAACTGCTGTGAAAGGGAAATTTATTAAAAATGTTACAGATCGTG
ATCTTCAGGGGATCGGTGACTGTGCTCACTCACAGTTCTTCAGTCTCTCACAGGGCTCTG
CTGTTACCCAAGCCAGGCAGAGCAGGCAGACGGAAGACTGAAATCCAGATAGCTCATTAT
CTCTGTGAGTTAAATGGCTTTGATCTCCAAGTTGTTTTCACTATTGTTGTAAGGGGATAG
CCTCCCCCCAACCCGTATCAAAAGGATGCTTTTTCCTTTTGACTTTTTATAAGCTAAGTC
AACAAAGTCTGTTTCGTCCGGTTTCGTTCACTTCACACAGGTGTATGCCCTCAGCTGCTT
CTGGTCTCAATTCTGTGCTAGCTGAATAGGTGTTCCATCCTCGGGTCATTCTTACTGGAG
TTTCTGCAGCCCACAGGCTGCCTTGTCAACAGTACCACTTAACACCAGCATTCAGCGACC
AGGCAGCCAAATGCCTGGTCTAGACAGAGATGATTTAAACATGATCTTTGTTGCATGGTA
GAAAGAGGGAACACATACTGGTTCTAGTTCTAAGGTTCTTAGATGTTTGGTCCTCCTGGC
ATTAGTGAAATAGCTTTAAACTATTTCAAGGGAGAAGCCTTGGCCACACCCACGACATTT
GGCCGACAGTCCTTTCTCTCCATGAGCCTTGCCTTCCCACCTGGCTGAAAGCTCACACTG
AATCTTTCCTGTGTCCTTGGTGTCTTGGGAGAAAGGGAACCCCGGTGTGGGCTTTACTGC
CGGCATTGGCTTGGAGCCAGCGTGGAGCAGAGCCCAACAGGGTGGGCCAGGCTTAGTTAT
GGTGTGCCGGTTTAAGGAATGCCTGGTTTGCCTGGTTGCCTGGGCTCCGAGCTAGAGTTT
CCTAGTAGTTCTTTATGGCTGACCTAGTTGGGAAAGACTCCCATACTCAGCTTCAGGTAG
AGGTGGTGAGAAACCTTTTCCTTTGTAGAGGCAGCATCATCCCAAGAGCCTACAGTGAGG
TGAGGTGGGAGGGGCAGGCGCTGGGGAGGGTCTGCCAAAG..........

No.	Exon / Intron	Start	End	Start Phase	End Phase	Length	Sequence
	5' upstream sequence						..........ACAGATGGTTGTGAGCTACCATGTTGCTGGGATTTGAACTCATGATCTCC GGAAGTCAGTCAGTGCGTTTAACCGCTGAGCCATCTCACCAGCCCTAAATTTTCTTTTCA GTGTGTTTCTTTCCCTCCGCATTTGCATGGGAAGCTGCCCTGTAGCTTCAAGCTCTGTAG CTTGGAAGGGAACCTTGGTGGAGTCTGGTAAATAGCAAACGCCGGTGCCTTTGTGTCCAG TCAAGTCATGATGGGTAATCAAAGCCCTACTCCTTGTTGAGTAGTTAGGCTCCAGGTACA TCGACAGTGTTTCCAGGAATCTTTATCATGGGCTTAAAAATACATCTCTAATAGGTGAGA AAACTGAGACTTCCGGATCGGGATAGCAATCTTGAGGAGGGTAACACATGTGTCTCTGGG CCAGACTCAAAAGCGCACACTGGTTTCGTTGCCTCTGCAGCAGCCTTCAAAGAGCTGCTC CTCCACTGGAAGATGAGAGGAAATCTTTTTCTCAGGTTATGGACGCCTAAGTTTTCCTTC AGACCAATTAAATCACAATCTCTGGGCTCGAAGCAGACATCGGTGTCTTTTCGGATTCCC TGTTTGATTCCCGTAAGCACCCAGGACACTGACCTGCCTTCTACTTTAACAGCCAGAGCC AGTGGCTGGCGCTCATGAAAGCAAAACTCAAGCGGAGGCGCGGAGGGAAGGAAGGAGGGG GATATTTCTCCTTATCTCAGCGTCAAAACCTGGGGAGGGGCCCTGGTGGGGGTCCCTGGG GGCTCAGGTGTGGCGCGGCTGCAGGAAGTAACCCCCTCCGGTGGCCCGGAGCGCTGGCCG ATTGCGCCATCCTACTGGGCTTTCGTAACCGCAAGCCGGGGCTGCCAAGAGGAGCTTCAG CACCGGTTCCTCAAATGTTTCGCTGTTGCCAGGACGGCCGGCTGCTGTGTGTCACGTGCA TGTGGGAAGTCGCGCCCACACCGATCTGAGCCACGCCGGGGCGAGCGCTC
1	EXON 1	89,912,955	89,913,162	-	1	208	GCAGTGCGAGCTGAGTGTGGAGCCCGAGGCCGAGGGCGACTGCTCTCGCTGCCCCAGTCT GCCGGCCGCCCGGCCCCGGCTGCGGAGCTGCTCTGCCGCCCGCCGTCCCGCGTAGAAGGA AGCATGCTGACCGTCGGCTGCACGCTGTTGGTCGCCCTGCTGGCCGCGCCCGCGGTCGCG CTGGTCCTCGGGAGCTGCCGCGCGCTGG
	INTRON 1 - 2	89,890,474	89,912,954			22,481	GTAAGAGGAACCCGGAGCGGGCGTG..........CTTACTTTGTGTTTTTCTTCCCCAG
2	EXON 2	89,890,237	89,890,473	1	1	237	AGGTGGCAAATGGCACAGTGACAAGCCTGCCAGGGGCCACCGTTACCCTGATTTGCCCCG GGAAGGAAGCAGCAGGCAACGTTACCATTCACTGGGTGTACTCTGGCTCACAAAACAGAA AATGGACTACCACAGGAAACACACTGGTTCTGAGGGACGTGCAGCTCAGCGACACTGGGG ACTATTTATGCTCCCTGAATGATCACCTGGTGGGGACTGTGCCCTTGCTGGTGGATG
	INTRON 2 - 3	89,889,311	89,890,236			926	GTGAGTTGTGCTGTCAGTGTCCTTG..........CCTCATCCTGCTGAGTCTCTTGCAG
3	EXON 3	89,889,187	89,889,310	1	2	124	TTCCCCCAGAGGAGCCCAAGCTCTCCTGCTTCCGGAAGAACCCCCTTGTCAACGCCATCT GTGAGTGGCGTCCGAGCAGCACCCCCTCTCCAACCACGAAGGCTGTGCTGTTTGCAAAGA AAAT
	INTRON 3 - 4	89,887,207	89,889,186			1,980	GTAAGTGTCAGGTGGGGCTGTGCAC..........TGCCCTTCTCTGTTGTGTCCCACAG
4	EXON 4	89,887,022	89,887,206	2	1	185	CAACACCACCAATGGGAAGAGTGACTTCCAGGTGCCCTGCCAGTATTCTCAGCAGCTGAA AAGCTTCTCCTGCCAGGTGGAGATCCTGGAGGGTGACAAAGTATACCACATAGTGTCACT GTGCGTTGCAAACAGTGTGGGAAGCAAGTCCAGCCACAATGAAGCGTTTCACAGCTTAAA AATGG
	INTRON 4 - 5	89,886,709	89,887,021			313	GTAAGGGAGCTCCCGCTGCAGCTGC..........TAGAAGCCCTATTCCCTCTCCACAG
5	EXON 5	89,886,542	89,886,708	1	0	167	TGCAGCCGGATCCACCTGCCAACCTTGTGGTATCAGCCATACCTGGAAGGCCGCGCTGGC TCAAAGTCAGCTGGCAGCACCCTGAGACCTGGGACCCGAGTTACTACTTGCTGCAGTTCC AGCTTCGATACCGACCTGTATGGTCAAAGGAGTTCACGGTGTTGCTG
	INTRON 5 - 6	89,886,044	89,886,541			498	GTAATTCATTTCCTTTGTTTGGAGA..........GGACTCACCATGTCTCCATCCTCAG
6	EXON 6	89,885,902	89,886,043	0	1	142	CTCCCGGTGGCCCAGTACCAATGCGTCATCCATGATGCCTTGCGAGGAGTGAAGCACGTG GTCCAGATCCGTGGGAAGGAGGAGCTTGACCTTGGCCAGTGGAGCGAATGGTCCCCAGAG GTCACGGGCACTCCTTGGATAG
	INTRON 6 - 7	89,878,896	89,885,901			7,006	GTACCTGGGTCTATGTGGAGGGAGG..........AGTCACTAACCCTTCCTTCTACCAG
7	EXON 7	89,878,849	89,878,895	1	0	47	CAGAGCCCAGGACCACCCCGGCAGGAATCCTCTGGAACCCCACACAG
	INTRON 7 - 8	89,877,914	89,878,848			935	GTGAGCTTGCCCCCAGAAAGGGCCA..........TGATGGTGAGGGTCATCTCTCCTAG
8	EXON 8	89,877,844	89,877,913	0	1	70	GTCTCTGTTGAAGACTCTGCCAACCACGAGGATCAGTACGAAAGTTCTACAGAAGCAACG AGTGTCCTCG
	INTRON 8 - 9	89,876,909	89,877,843			935	GTAAGCGCTAGTGTCTTGCTATTCC..........TATCATTCCCTTCCCCTGCCCACAG
9	EXON 9	89,876,809	89,876,908	1	2	100	CCCCAGTGCAAGAATCCTCGTCCATGTCCCTGCCCACATTCCTGGTAGCTGGAGGAAGCT TGGCGTTTGGGTTGCTTCTCTGTGTCTTCATCATCCTGAG
	INTRON 9 - 10	89,871,387	89,876,808			5,422	GTGAGACGGGTCCTGTACTGTATTG..........TTTGTTTCTCTGTGTTTGTATAAAG
10	EXON 10	89,869,324	89,871,386	2	-	2,063	ACTCAAGCAGAAATGGAAGTCAGAGGCTGAGAAGGAAAGCAAGACGACCTCTCCTCCACC CCCACCGTATTCCTTGGGCCCACTGAAGCCGACCTTCCTTCTGGTTCCTCTCCTCACCCC ACACAGCTCTGGGTCTGACAATACCGTAAACCACAGCTGCCTGGGTGTCAGGGACGCACA GAGCCCTTATGACAACAGCAACAGAGACTACTTATTCCCCAGATAATCATCTGGATGGTA CCTGGCAGCTGGCAGGGCACCACGAGATCAGCACACAAGTTTCTCATGCGGGTCCCATCC ACCTGGGGTGGGGTGGGGCGGGCGGGGCTGCAGCTTCACTAACCCACAAGAGCTCTGCAC AGGTTCTGAGTAGGTGCAGCTGGTGCTGCATAGGCTCTGAAGGAAGGAAGGGGCTGTGAG GAACACAGGCCATTGTGAAGACAGCTTGTGATGACTGAATAGAGATGCCCGTCAGCTCCA CATCTGATAGTGGCTCACAAGCTGCACCCTCAGGAGGCCTCAGAAAGGGGCTCCAAAGGC TGCCCCAGCTGCCTCGCTCTGCCTCACTGCCCCAAGCCACCTTTTAGCTCTCGAACTCCT AAAGTCCAAGCACTTTGCCATTCTCTTTCCGAGGCCACTGAGGCCGGGTGGAAGCTTGGT TCCGATTTCCTTCTCAACATCTGGAAAGCAGCTGGGCCCGGTGGTGGTGACTAATATCTC AGGGCCTGATGGTTTACGCGAGTGACAATTTCTCACAAGCAGTTTTTAAATGTGAATGAT GACCCCAGGCACTGCTGGCTGCGGAGGCTTCATTTTCCTCTTCGATCTCAGGACTTCAGG CGAAAAGCGGAGTGGAAGTAGAGAGCGGATGGGTGTCCACCGTCCTCATGGTACTTGCGG GAGGTACAGCCTGGAAAACACGTTTCCTGTCCCCCTACTCTCCCAGGAGAGGGATGATGG TAGGGGGTGCCTCTTCCAGGGCGGAGAGAACTACTTTACCCCAGCCTTGCCCATTCTGAT TTCAACTGGACTGGAGCTACTAGGAAAGTCGACATTCATGCAAAAAGAAAAAACGTTAAC TAGCAAGAATGCACTTTCATTTTGGTTTTTAGAGAACTGTTGCCTGTTTCTCTCAAGAGT CTGGAAGAGGCCGCTCACTGCACACTACTGTATGAACCCTCACTGCCCACCCTGGAGGAC CAAGTGCAGTAACGGTAGCCCAAACACCAAGTCAAGTGAAAATCGAGGGAAAAAAAAAAC AAACAAGCAACAAAAAAAAAAAACCAAAACTAAACTAAAAAACAAACCACCCCCCCAAAA AAAACAAAACCAAAAACCAAAAAAAAACAAAAAAACAAAACAACAACAACAAAAAAAACC CAAACCAACCCGCTGTTTCCTATAACAGAAAAGCCTTTGGTTTCATTTTTTATTTTGATT TTTTTGTCTTAAAAAGTATAAAAATAGCCTGTCCATGCTCTGCTTCAGGGAATGAGCCTG TGAACACTCCCAGGCGCAGGCAGGAAGGGTGTCTGCTTCCTGCTACACCTCACTGCCACC TCGGCCTTCCTTGCTTTACGTTTGACTGAGTGGCCTCAGATGCTTTCCCCTGGGGCTTTG AGGAATCCAGTGATGTTAGTGGTCACCGAGGAGACCACAGAGCCACAGTGTGGTGCTTAG ATTAAAGTGACTTCTGCAACCACAGCACCCCACACCTGCCGTCTTACTGAACTATGCCAG TAACTTGCCTTTTCTGCCACCACCAAGAGACGAGACGGGCAGAGCTCGGAAGCTGTCACC CCATGCCCTCTGCTTGTCGGCTCTAGGGGCCACTGACCTAAGCATTAGTTATTTTATTTT ATTTTATTTTTTTGTGGGTTTTGTACATTTTAGGTCCTGTTGCTGTCTTAGAAAAGGCTC TGTAGGTTGACAGAAAATCAGGCCAAGTATTCATGTTTTGTTTTTTTTTTTTTTCCTTCT TTCCTCCTTTGCTAAGTTTTTGGGACTCAAGGGTAGCAAAACTGCTGTGAAAGGGAAATT TATTAAAAATGTTACAGATCGTG
	3' upstream sequence						ATCTTCAGGGGATCGGTGACTGTGCTCACTCACAGTTCTTCAGTCTCTCACAGGGCTCTG CTGTTACCCAAGCCAGGCAGAGCAGGCAGACGGAAGACTGAAATCCAGATAGCTCATTAT CTCTGTGAGTTAAATGGCTTTGATCTCCAAGTTGTTTTCACTATTGTTGTAAGGGGATAG CCTCCCCCCAACCCGTATCAAAAGGATGCTTTTTCCTTTTGACTTTTTATAAGCTAAGTC AACAAAGTCTGTTTCGTCCGGTTTCGTTCACTTCACACAGGTGTATGCCCTCAGCTGCTT CTGGTCTCAATTCTGTGCTAGCTGAATAGGTGTTCCATCCTCGGGTCATTCTTACTGGAG TTTCTGCAGCCCACAGGCTGCCTTGTCAACAGTACCACTTAACACCAGCATTCAGCGACC AGGCAGCCAAATGCCTGGTCTAGACAGAGATGATTTAAACATGATCTTTGTTGCATGGTA GAAAGAGGGAACACATACTGGTTCTAGTTCTAAGGTTCTTAGATGTTTGGTCCTCCTGGC ATTAGTGAAATAGCTTTAAACTATTTCAAGGGAGAAGCCTTGGCCACACCCACGACATTT GGCCGACAGTCCTTTCTCTCCATGAGCCTTGCCTTCCCACCTGGCTGAAAGCTCACACTG AATCTTTCCTGTGTCCTTGGTGTCTTGGGAGAAAGGGAACCCCGGTGTGGGCTTTACTGC CGGCATTGGCTTGGAGCCAGCGTGGAGCAGAGCCCAACAGGGTGGGCCAGGCTTAGTTAT GGTGTGCCGGTTTAAGGAATGCCTGGTTTGCCTGGTTGCCTGGGCTCCGAGCTAGAGTTT CCTAGTAGTTCTTTATGGCTGACCTAGTTGGGAAAGACTCCCATACTCAGCTTCAGGTAG AGGTGGTGAGAAACCTTTTCCTTTGTAGAGGCAGCATCATCCCAAGAGCCTACAGTGAGG TGAGGTGGGAGGGGCAGGCGCTGGGGAGGGTCTGCCAAAG..........

Sequence Detail Report

Gene Symbol (Gene ID)	Il6ra (ENSMUSG00000027947)
Transcript ID	ENSMUST00000029559

		SNP Information
Strain :
Sequence Retrieve :
Exon translate : CDS Start ( 1 ) - End ( 461 ) -
Strand :	forward reverse
Show sequence :	nucleotide amino acid
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