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Target CDS Information

Gene Symbol (Gene ID) Phf2 (ENSMUSG00000038025)
Cross Reference
CCDS CCDS26496.1
EMBL AC109249, AF043726, AK172995, ...show all
GO GO:0000777, GO:0003713, GO:0003713, ...show all
goslim_goa GO:0000988, GO:0003674, GO:0005575, ...show all
MGI_trans_name Phf2-201
protein_id AAD21792.1, AAH51633.1, BAD32273.1
Reactome R-MMU-3214842, R-MMU-3247509, R-MMU-4839726
RefSeq_mRNA NM_011078.3
RefSeq_peptide NP_035208
UCSC uc007qin.2
UniParc UPI0000191082
Uniprot/SWISSPROT Q9WTU0
Definition protein_id:ENSMUSP00000047308
translation:
MATVPVYCVCRLPYDVTRFMIECDACKDWFHGSCVGVEEEEAPDIDIYHCPNCEKTHGKS
TLKKKRTWHKHGPGPTPDVKPVQNGSQLFIKELRSRTFPSAEDVVSRVPGSQLTVGYMEE
HGFTEPILVPKKDGLGLAVPAPTFYVSDVENYVGPERSVDVTDVTKQKDCKMKLKEFVDY
YYSTNRKRVLNVTNLEFSDTRMSSFVEPPDIVKKLSWVENYWPDDALLAKPKVTKYCLIC
VKDSYTDFHIDSGGASAWYHVLKGEKIFYLIRPASANISLYERWRSASNHSEMFFADQVD
RCYKCTVKQGQTLFIPSGWIYATLTPVDCLAFAGHFLHSLSVEMQMRAYEVERRLKLGSL
TQFPNFETACWYMGKHLLEAFKGSHKSGKQLPPHLVQGAKILNGAFRSWTKKQALAEHED
ELPEHFRPSQLIKDLAKEIRLSENASKTVRPEVNAAASSDEVCDGDREKEEPPSPVETTP
PRSLLEKVSKKKTSKTVKMPKPSKIPKPPKSPKPPKTLKLKDGSKKKGKKCKESASPTIP
NLDLLEAHTKEALTKMEPPKKGKTPKSVLSVPNKDTVHTQNDMERLEIREQTKSKSEAKW
KYKNSKPDSLLKMEEEQRLEKSPLAGNKDKFSFSFSNRKLLGSKALRPPSSPGVFGALQS
FKEDKAKPVRDEYEYVSDDGELKIDEFPIRRKKSAPKRDLSFLLDKKEALLMPTSKPKLD
SAVYKSDDSSDEGSLHIDTDTKPGRNAKVKKESGSSAAGILDLLQASEEVGALEYNPNSQ
PPASPSTQEAIQGMLSMANLQASDSCLQTTWGTGQAKGGSLAAHGARKIGGGNKGTGKRL
LKRTAKNSVDLEDYEEQDHLDACFKDSDYVYPSLESDEDNPVFKSRSKKRKGSDDAPYSP
TARVGPSVPRQDRPVREGTRVASIETGLAAAAAKLSQQEEQKNRKKKNTKRKPAPNTASP
SISTSASASTGTTSASTTPASTTPASTTPASTTPASTSTASSQASQEGSSPEPPPESHSS
SLADHEYTAAGTFSGSQAGRASQPMAPGVFLTQRRPSASSPNNTAAKGKRTKKGMATAKQ
RLGKILKIHRNGKLLL

Chromosome 13
Length
Position(start - end)
67,165
48,803,599 - 48,870,765
Orient to Chromosome minus
Link Location : (13:48803599-48870765)
/

Detail Map


 

Report

Polymorphisms Report

Target Strain  MSMv4  JF1v3  KJRv1  SWNv1  CHDv1  NJLv1  BLG2v1  HMIv1  BFMv1  PGN2v1
Gene Symbol (Gene ID) Phf2 (ENSMUSG00000038025)
Transcript ID ENSMUST00000035540
Reports
substitution
cSNPs7
Insertion41
Deletion61
SNPs
+1kb
5'UTR
CDS
3'UTR
INTRON
-1kb
Insertions
+1kb
5'UTR
CDS
3'UTR
INTRON
-1kb
Deletions
+1kb
5'UTR
CDS
3'UTR
INTRON
-1kb
coding sequence substitutions
premature termination by the nucleotide substitution0
synonymous num5
non-synonymous num2
synonymous substitutions 48805859 (p.Arg890Arg), 48805874 (p.Ser885Ser), 48807771 (p.Gly814Gly), 48817794 (p.Arg467Arg), 48823093 (p.Leu215Leu),
non-synonymous substitutions 48807715 (p.Asn833Ser), 48817664 (p.Ser511Pro),
B6 transcript
(ENSMUST00000035540)
MATVPVYCVCRLPYDVTRFMIECDACKDWFHGSCVGVEEEEAPDIDIYHCPNCEKTHGKS
TLKKKRTWHKHGPGPTPDVKPVQNGSQLFIKELRSRTFPSAEDVVSRVPGSQLTVGYMEE
HGFTEPILVPKKDGLGLAVPAPTFYVSDVENYVGPERSVDVTDVTKQKDCKMKLKEFVDY
YYSTNRKRVLNVTNLEFSDTRMSSFVEPPDIVKKLSWVENYWPDDALLAKPKVTKYCLIC
VKDSYTDFHIDSGGASAWYHVLKGEKIFYLIRPASANISLYERWRSASNHSEMFFADQVD
RCYKCTVKQGQTLFIPSGWIYATLTPVDCLAFAGHFLHSLSVEMQMRAYEVERRLKLGSL
TQFPNFETACWYMGKHLLEAFKGSHKSGKQLPPHLVQGAKILNGAFRSWTKKQALAEHED
ELPEHFRPSQLIKDLAKEIRLSENASKTVRPEVNAAASSDEVCDGDREKEEPPSPVETTP
PRSLLEKVSKKKTSKTVKMPKPSKIPKPPKSPKPPKTLKLKDGSKKKGKKCKESASPTIP
NLDLLEAHTKEALTKMEPPKKGKTPKSVLSVPNKDTVHTQNDMERLEIREQTKSKSEAKW
KYKNSKPDSLLKMEEEQRLEKSPLAGNKDKFSFSFSNRKLLGSKALRPPSSPGVFGALQS
FKEDKAKPVRDEYEYVSDDGELKIDEFPIRRKKSAPKRDLSFLLDKKEALLMPTSKPKLD
SAVYKSDDSSDEGSLHIDTDTKPGRNAKVKKESGSSAAGILDLLQASEEVGALEYNPNSQ
PPASPSTQEAIQGMLSMANLQASDSCLQTTWGTGQAKGGSLAAHGARKIGGGNKGTGKRL
LKRTAKNSVDLEDYEEQDHLDACFKDSDYVYPSLESDEDNPVFKSRSKKRKGSDDAPYSP
TARVGPSVPRQDRPVREGTRVASIETGLAAAAAKLSQQEEQKNRKKKNTKRKPAPNTASP
SISTSASASTGTTSASTTPASTTPASTTPASTTPASTSTASSQASQEGSSPEPPPESHSS
SLADHEYTAAGTFSGSQAGRASQPMAPGVFLTQRRPSASSPNNTAAKGKRTKKGMATAKQ
RLGKILKIHRNGKLLL*
MSMv4 transcript
MATVPVYCVCRLPYDVTRFMIECDACKDWFHGSCVGVEEEEAPDIDIYHCPNCEKTHGKS
TLKKKRTWHKHGPGPTPDVKPVQNGSQLFIKELRSRTFPSAEDVVSRVPGSQLTVGYMEE
HGFTEPILVPKKDGLGLAVPAPTFYVSDVENYVGPERSVDVTDVTKQKDCKMKLKEFVDY
YYSTNRKRVLNVTNLEFSDTRMSSFVEPPDIVKKLSWVENYWPDDALLAKPKVTKYCLIC
VKDSYTDFHIDSGGASAWYHVLKGEKIFYLIRPASANISLYERWRSASNHSEMFFADQVD
RCYKCTVKQGQTLFIPSGWIYATLTPVDCLAFAGHFLHSLSVEMQMRAYEVERRLKLGSL
TQFPNFETACWYMGKHLLEAFKGSHKSGKQLPPHLVQGAKILNGAFRSWTKKQALAEHED
ELPEHFRPSQLIKDLAKEIRLSENASKTVRPEVNAAASSDEVCDGDREKEEPPSPVETTP
PRSLLEKVSKKKTSKTVKMPKPSKIPKPPKPPKPPKTLKLKDGSKKKGKKCKESASPTIP
NLDLLEAHTKEALTKMEPPKKGKTPKSVLSVPNKDTVHTQNDMERLEIREQTKSKSEAKW
KYKNSKPDSLLKMEEEQRLEKSPLAGNKDKFSFSFSNRKLLGSKALRPPSSPGVFGALQS
FKEDKAKPVRDEYEYVSDDGELKIDEFPIRRKKSAPKRDLSFLLDKKEALLMPTSKPKLD
SAVYKSDDSSDEGSLHIDTDTKPGRNAKVKKESGSSAAGILDLLQASEEVGALEYNPNSQ
PPASPSTQEAIQGMLSMANLQASDSCLQTTWGTGQAKGGSLAAHGARKIGGGSKGTGKRL
LKRTAKNSVDLEDYEEQDHLDACFKDSDYVYPSLESDEDNPVFKSRSKKRKGSDDAPYSP
TARVGPSVPRQDRPVREGTRVASIETGLAAAAAKLSQQEEQKNRKKKNTKRKPAPNTASP
SISTSASASTGTTSASTTPASTTPASTTPASTTPASTSTASSQASQEGSSPEPPPESHSS
SLADHEYTAAGTFSGSQAGRASQPMAPGVFLTQRRPSASSPNNTAAKGKRTKKGMATAKQ
RLGKILKIHRNGKLLL*
homology99.82 (1097 / 1097)

Exon Detail Report

Target Strain  MSMv4  JF1v3  KJRv1  SWNv1  CHDv1  NJLv1  BLG2v1  HMIv1  BFMv1  PGN2v1
Gene Symbol (Gene ID) Phf2 (ENSMUSG00000038025)
Transcript ID ENSMUST00000035540
No. Exon / Intron Start End Start Phase End Phase Length Sequence
5' upstream sequence
..........CAGGGTCGACCTGGGTAGGGGACAGAGAAGGACCCTCATTCATATCTCAC
CAACCAACCAAACAACCAACCAACCAACCAACAAAAAAGCTCTAAGCAGGACAGGTGAGA
CCAGGGAGCCAGTTCAGGGCAAGACTGCAGGGGCGAGAGCGACAACATAACCTCTTGTCT
TCCCCAGCAGTCCTGTGGCTCAGTTGCGACTCACTGGTCTGTCCTCCGCTCCTAAGGTCT
GTGGGTCTATGGGTTGTAATAAGGGGTCCTGGGCGGCACCAATCCCAGGTAAGCTGTGTC
CTACAACAAACAGTTCACTCTCGGGTCCCCTGACTTTTGCCGGAGCATCGGGAAAGTTCA
CCGGGTCGTACGAGGAAGCAAGGCAGCCCCCAGCTAGAAAGAAGGGGAAGGGGAGGTTAT
TCAAAAGCCAGCAACTCAGTCGCAGTTCGGGATGGGAGGGAGGCTGCCGGGCCCAGGAAG
AGGAGGAAGATCCCCCTGTCCATCCCACTTCGGGGTCAGAAGAAAGTTAAGGCCAAGGAG
TTGCTTCTGGCTAAGGCAGGGCTGTGCGAACTGTGTTCACGTAGTCGGGGGCAGGGGGCT
CCGCGGCTCGTCTCCCTGGGAGTCCCGGGGCCACCCTCTCCCGCGGGGTGCCCCCGAGCC
CGGCTGCTGGCTCCCCCAGGCCCGCGGCCCACCTTCTACCGCGGCCCGCCTTCCCGGCGG
CGGGAGCGGGGCCCAGGCCGGCGGGCGGAGGCGGCGCCACCCGGGGCGCTGACGTAGCGG
CCGCTCGGCGGCCGGGGGTCCCTTCGGTGGGGCCGCGGCTCCCCGCCCGCCGCCCCCGCG
CGTCCATTCGCTTTGTGTCCCGCGCGCGGCCGGGCCCCCCGCGCACTCTCAGCCCTGCGC
CCCGCGGCCCGGCGGGCGGCTCCCGGCGCGGCCCCAGCAGCCCGCGCCGGCATTGTGTGG
ACGCGCCCGGCCGCGAGCGCGCGCGCGGGCCCTGCCGAGCGCCCCCGGCC
1 EXON 1 48,870,668 48,870,885 - 2 218
CCGTCCGCTCCGGCCGCGGCGCCCGCGCCCGCCGCCCCCGCCGCCCTCGCCGCGCGGCCC
CCGGCCCGGCCCGGCCCGACCCGGGCAGCGCAGCGGCGGGGCGAGCGGCGGCGCGGCAAC
ATGGCGACGGTGCCCGTGTACTGCGTCTGCCGGCTGCCCTACGACGTTACCCGCTTTATG
ATCGAGTGCGATGCCTGCAAGGACTGGTTCCACGGCAG
INTRON 1 - 2 48,835,296 48,870,667 35,372
GTGAGCGCGCCGCGGCCCGCCCGGC..........AAAGGTCTGTCTCCTCCCGTTCCAG
2 EXON 2 48,835,210 48,835,295 2 1 86
CTGTGTTGGGGTGGAAGAGGAAGAGGCACCAGACATCGACATTTACCACTGCCCGAACTG
CGAGAAAACCCATGGCAAGTCCACAC
INTRON 2 - 3 48,832,119 48,835,209 3,091
GTGAGTACCTCAGCCCACGGGGAGC..........CGCTCATCTTCTGTCTCCTCCACAG
3 EXON 3 48,832,004 48,832,118 1 2 115
TCAAGAAAAAGCGGACTTGGCACAAACACGGCCCTGGGCCAACACCGGACGTGAAACCAG
TGCAGAATGGCAGTCAGCTGTTCATCAAGGAGCTGCGGAGCCGAACCTTCCCCAG
INTRON 3 - 4 48,828,947 48,832,003 3,057
GTGGGCAGACCTTCCAAGGTGGGCG..........CCTCCCACCCTCCCTCTCTCCATAG
4 EXON 4 48,828,786 48,828,946 2 1 161
TGCTGAAGACGTGGTGTCCCGTGTGCCAGGTAGCCAGCTCACCGTGGGCTACATGGAGGA
GCATGGCTTCACTGAGCCCATCCTTGTCCCCAAGAAAGATGGCCTGGGCTTAGCTGTCCC
TGCCCCAACATTCTACGTGAGTGATGTGGAGAACTATGTGG
INTRON 4 - 5 48,826,194 48,828,785 2,592
GTGAGTACTGCCCTTTGCATCCCTT..........TGTTCATGTCCTGCTTCCTCCCCAG
5 EXON 5 48,826,052 48,826,193 1 2 142
GGCCGGAGAGGAGTGTGGATGTGACAGACGTTACCAAACAGAAAGACTGCAAAATGAAGC
TGAAAGAATTCGTGGACTATTACTATAGCACGAACCGCAAGCGTGTTCTCAACGTGACCA
ACCTCGAGTTCTCAGACACCAG
INTRON 5 - 6 48,823,136 48,826,051 2,916
GTGACAGGCTACTCTGGGTTGGTTG..........ACTGCCCTTCCTTTTATGGCTCTAG
6 EXON 6 48,822,949 48,823,135 2 0 187
AATGTCCAGCTTTGTGGAGCCACCTGACATTGTGAAGAAACTGTCGTGGGTGGAAAACTA
CTGGCCCGATGACGCGCTGCTGGCCAAGCCCAAGGTGACCAAGTACTGCCTGATCTGTGT
GAAGGACAGCTACACCGACTTCCACATTGACTCTGGAGGTGCCTCAGCGTGGTACCATGT
CCTCAAG
INTRON 6 - 7 48,821,694 48,822,948 1,255
GTGAGCCACACCCCTAGACACATCC..........CTCTGCCAGTGAGTTCTTTTGGCAG
7 EXON 7 48,821,531 48,821,693 0 1 163
GGGGAGAAGATCTTCTATCTCATCCGGCCAGCCTCAGCCAACATCTCCCTATATGAGCGC
TGGCGGTCAGCCTCCAACCACAGCGAGATGTTCTTCGCCGACCAGGTGGACAGGTGCTAT
AAATGCACTGTCAAGCAGGGCCAGACCCTCTTCATCCCCTCAG
INTRON 7 - 8 48,820,614 48,821,530 917
GTGAGTGTGCTGCACAGGTACAGGG..........TCACAGCTTTACATGTCTCTCTCAG
8 EXON 8 48,820,526 48,820,613 1 2 88
GCTGGATCTATGCCACACTCACCCCCGTGGACTGCCTGGCCTTCGCTGGACATTTCCTCC
ACAGCCTCAGTGTGGAGATGCAGATGAG
INTRON 8 - 9 48,820,148 48,820,525 378
GTAGGTCGCTCCTACAGTGCTGTCC..........ACTAGTTCTTTCCTGTGGCTTCCAG
9 EXON 9 48,820,041 48,820,147 2 1 107
GGCATACGAGGTGGAAAGGAGGTTAAAACTTGGCAGCCTGACTCAGTTTCCCAACTTTGA
AACTGCCTGCTGGTACATGGGAAAGCACCTATTGGAAGCGTTCAAAG
INTRON 9 - 10 48,819,632 48,820,040 409
GTACCTGTCACTCCAGGTTGGGTGA..........AACTAATTTATTGTGTCCTTCCCAG
10 EXON 10 48,819,540 48,819,631 1 0 92
GTTCTCACAAGTCTGGGAAACAGCTGCCCCCACACTTAGTTCAAGGAGCTAAAATTCTCA
ATGGTGCTTTTAGGTCATGGACGAAGAAGCAG
INTRON 10 - 11 48,818,392 48,819,539 1,148
GTAAGAAGCAGCTCACAGAGTGTGT..........TGACACTGACCCCACGGTTCCACAG
11 EXON 11 48,818,302 48,818,391 0 0 90
GCTTTGGCAGAGCATGAGGACGAACTCCCAGAGCACTTCAGGCCCTCACAGCTCATCAAG
GACCTGGCCAAAGAGATCAGGCTCAGTGAG
INTRON 11 - 12 48,817,866 48,818,301 436
GTAAGGCCATGCCAGGGACCCTAGG..........TGACCCTCTCCTTTTCCCATCCCAG
12 EXON 12 48,817,506 48,817,865 0 0 360
AATGCCTCCAAAACTGTCCGACCTGAAGTAAACGCTGCCGCCTCCTCAGATGAGGTCTGT
GATGGAGACCGAGAGAAGGAAGAACCGCCATCTCCTGTTGAGACTACCCCACCTCGATCC
CTCCTGGAGAAAGTGTCCAAAAAAAAGACTTCCAAGACTGTGAAGATGCCCAAGCCATCC
AAAATTCCCAAGCCCCCCAAACCCCCCAAGCCCCCCAAAACTCTGAAGCTCAAAGATGGG
AGCAAGAAGAAAGGGAAGAAGTGCAAGGAGTCAGCCTCACCCACCATCCCCAACCTAGAC
CTGCTTGAGGCTCACACAAAGGAGGCGCTGACCAAGATGGAGCCACCGAAGAAAGGGAAG
INTRON 12 - 13 48,816,555 48,817,505 951
GTAGGCTCCTGAGCCCCTCCCTCAT..........GGGTCACGGCTACCTCTGTTTGCAG
13 EXON 13 48,816,435 48,816,554 0 0 120
ACCCCAAAGAGCGTCCTGAGTGTTCCCAATAAGGACACAGTCCACACGCAGAATGACATG
GAAAGGCTGGAAATTCGAGAGCAAACAAAGAGCAAGTCAGAAGCCAAGTGGAAATACAAG
INTRON 13 - 14 48,816,071 48,816,434 364
GTGAGGGTGGGTGTGGGCCTGTGCC..........GGGACAACCTTGGCCTTGCTTTCAG
14 EXON 14 48,815,955 48,816,070 0 2 116
AACAGCAAACCTGACTCGTTACTGAAGATGGAGGAGGAGCAGAGGCTGGAGAAGTCGCCC
CTGGCTGGGAACAAGGACAAGTTTTCCTTTTCTTTCTCCAACAGAAAACTCCTGGG
INTRON 14 - 15 48,814,045 48,815,954 1,910
GTACGTGAGAGCCTGGGCAGGGATG..........CACTGACCTATTCCTACTACTCTAG
15 EXON 15 48,813,866 48,814,044 2 1 179
CTCCAAGGCCCTCAGGCCCCCGAGCAGCCCTGGTGTGTTCGGCGCCTTGCAGAGCTTCAA
GGAGGACAAGGCCAAGCCCGTGCGCGATGAGTATGAGTACGTATCAGATGATGGGGAGCT
GAAGATAGACGAGTTTCCCATCAGGAGGAAGAAGAGCGCCCCCAAAAGGGACTTGTCCT
INTRON 15 - 16 48,813,774 48,813,865 92
GTGAGTCTGGTGGGTGTGGGCAGGG..........TGACAGTTATCCACTGTGCTTTCAG
16 EXON 16 48,813,703 48,813,773 1 0 71
TCTTGTTAGACAAGAAGGAGGCTCTCCTCATGCCCACCTCGAAGCCAAAGCTGGATTCTG
CGGTGTACAAG
INTRON 16 - 17 48,813,070 48,813,702 633
GTGAGCCTCCCAGCCCCTTCCCACA..........TGCTGCTCTGTCCCTGGCTCCGCAG
17 EXON 17 48,812,909 48,813,069 0 2 161
AGCGATGACTCCTCTGACGAGGGCTCTCTGCACATCGACACGGACACCAAGCCAGGCAGA
AATGCCAAAGTGAAGAAGGAGAGTGGGAGCTCCGCGGCCGGCATCCTGGACCTGCTGCAG
GCCAGCGAGGAGGTTGGCGCACTCGAGTACAACCCCAACAG
INTRON 17 - 18 48,807,877 48,812,908 5,032
GTGGGCCCTGGCTGTGTCCCTCAGC..........GCTTGTTGTTTCTCTCTGTCCCCAG
18 EXON 18 48,807,605 48,807,876 2 1 272
CCAGCCCCCTGCCTCCCCCAGCACACAGGAAGCCATTCAGGGAATGCTCTCCATGGCCAA
TCTGCAGGCCTCTGACTCTTGCCTGCAGACCACATGGGGCACGGGACAGGCCAAGGGTGG
CTCACTGGCAGCCCATGGTGCCCGGAAGATTGGTGGTGGCAGCAAAGGCACAGGCAAGCG
CCTGCTGAAGAGGACTGCCAAGAACAGTGTGGATCTGGAGGACTACGAGGAGCAGGATCA
CCTGGATGCCTGCTTCAAGGACTCAGACTATG
INTRON 18 - 19 48,805,921 48,807,604 1,684
GTGAGTGTGGCTGCAGGGCAGGGCT..........GATCTCCTATTGCTGATCTCCTCAG
19 EXON 19 48,805,825 48,805,920 1 1 96
TTTACCCCTCACTGGAGTCTGACGAAGATAACCCCGTCTTCAAGTCTCGGTCAAAGAAGA
GAAAAGGCTCAGACGATGCTCCGTACAGCCCCACAG
INTRON 19 - 20 48,805,341 48,805,824 484
GTAGAGCGGGGCTGGGGGCCTGATA..........GGCCTTTTCCTGGTCTCTTCCACAG
20 EXON 20 48,805,231 48,805,340 1 0 110
CCAGGGTCGGTCCATCGGTGCCAAGACAAGACAGGCCTGTGCGTGAGGGGACCAGAGTGG
CCTCCATTGAGACGGGGCTGGCAGCTGCTGCAGCCAAGCTGTCCCAGCAG
INTRON 20 - 21 48,804,723 48,805,230 508
GTGAGGAGAAGGAAGGGTTCGTGCA..........GCACCCCTCCATACTTTGTTCTTAG
21 EXON 21 48,804,335 48,804,722 0 1 388
GAGGAGCAGAAAAACAGGAAGAAGAAGAACACCAAAAGGAAGCCGGCTCCTAACACTGCC
TCCCCCTCCATCTCCACCTCTGCCTCCGCCTCCACGGGTACCACCTCGGCCTCCACCACC
CCAGCATCCACCACCCCGGCCTCCACCACCCCAGCATCCACCACCCCGGCCTCCACCAGC
ACAGCCAGCAGCCAGGCCTCACAGGAGGGCAGCTCACCTGAGCCCCCACCTGAATCACAC
AGCAGTAGCCTGGCTGACCACGAATATACAGCAGCCGGCACATTCTCGGGGTCCCAGGCT
GGCCGTGCCTCCCAGCCCATGGCCCCTGGAGTCTTTCTCACACAGAGGCGGCCTTCTGCA
TCATCCCCCAACAACACTGCTGCCAAAG
INTRON 21 - 22 48,803,688 48,804,334 647
GTACCGCTTTTGCCCCGTTTGCCCC..........AAATAATTTCTCCCCACCTCTGTAG
22 EXON 22 48,801,750 48,803,687 1 - 1,938
GAAAACGTACAAAAAAGGGCATGGCCACCGCCAAGCAAAGGCTTGGAAAGATCTTGAAGA
TCCATCGGAACGGGAAACTGCTCCTCTAAGGCTTGGGAAGCCAGGATCCTTCTGCTCTGC
TCAGGACCCCCGGAGCCCCGCTACATCCACCCCTCCCAGGACGGTGGCTGTGCCGCCTGG
CCCAGGGAGGGCCTCGCCTCCTCCCAGCCACCTCTCCCCAATGCGAGCATCTGTCCCTTG
AGCAGGTGGAGCGAGCGAGCGAGCGGAGCATGGCCGTCCCTTGTTGTGAACACGGACATC
CTTTCTCGAGTTGCTCAGAGTGACCTGAAAGTGGCCCCGCCGACTTAAGGATCATTCTGG
TTTCAGAACAGCCTCCAGGCTCCCCACTGGAGCGGCTCTGCTTAGGAGCATGAGGCCTTC
AAGGAAGGTGCAGTGAGCCACGCTCACCAGCCCGAGTCCGAGCTGGCCCCAGGCTGGCAG
CCTCCAAAGGCGTAAAACAAGGCAAAGGACACAGAAAGGAGCTGTAGGGTATTGAATGTC
CCCACCCACCTCTTCCTGAGCGAGGCTTATATCACTTGACCAGTGAGGAAGAGGTTACCC
CAGCTCCCTGGCTGGCAGGTAGCAGGCTAGGTAATGGGTGTCACACACATCCCAAATGCC
TAGGGACATTTGGGCTTGTCAGGACCCACAGTTAGGTTGGTGTGTTAGTGGGTTGGAGGA
GCCACTGTGGGGGTCACAGGGGAAGGGTGACAGCTCAGCCACGTCTTCGGGTCCGGGGGA
CCCAGGCTAAGCCACGTGGAGGGGCCCCACTCTGAAACAGCACTTCTAGGCCAAGGCACC
CTGCCCTGAGTGGGCAGACAGGTGAGCAGGGCCACAGGGCTGGAGCCAGCACGGCAGCGC
TTGTCTGAGCCCCTGGGTGGCGTCATGAGTGTGGGCCATCTCAGGTGGCGGTGTCCACCC
ATCGACACGGAGGGGCTGGGTTTGTTTCTCAGGCAATCCTGTATTTTCATTTTAGATGTA
TTTCCGGAAGCATATTTTTCATAGAATGTAGCGTGTAAATAGCTTTTTAAATGACTTCTT
TTTTACAAGAGCAAAAGTATCTCTAGGAATTTCTTTCTATAGAGTCCTTCATTAACCTTT
ATACGAGTTTTTGCTCCCCCACCCCCTTCTCTGATGGATGGTCGGGTTCTGGCCCCCCAC
CCCCTTTTCTTTCCTTTCCTTTTGTTACTCCTTCTTATTTTCCTCTTAGGAACTAAGGTA
TTGCCTGAAAAACAACGGCGCCTGCGCGGCCTTACACTCCGCCTCTCAGAGCGGACAGTA
CAGAGGCCCCTCCCACTCGCCCCGAAAGCCGCGTCTCCAGTCTCACACCAGCTCTTCGGT
CCTCTTCCTTGTATGGCGAGGGTCGGGGATGCAGTTACTTTGCTAGCACCTTGTGAAGTA
TTTGTGTTTCGTGATGCTGTAATTTATTAATGTTTGTAGCTTTTTATATTTGTACATTTC
TTATGAGGTTTGTTTCTACACCCGTTACCCGGATGTGTTGTCCACGAGGAGATGCAGCTT
GGCGGAGGCCTTATCCACTCCCACTTGACCTGTTTGGAGGGACGCCATCCCCAGGGCCCG
GGGCTGGGAGAGGGGCATCGTGCAGGCCCCAGGCTTACTCAGAACTGGTGTTTTTAAAAG
TTTTCCTTGACCCTGTCCTTGTGAACATTTCTATAATCTTAACCCGGGCATCAAGCTGTT
CTCTCTCTCTCTCTCTCTCTCTTTCTCTTTTTAATTTTATTATTATTTTGGCGACATGTA
CATTTCTAACAAAGTTTATCGTGGCTATTAAAGTGTTCTATTTCCCAGTTCATATTACTC
TTGTATCGAGTCCATGAGGTCTAAGGCAACTTAGACCAAAGTTTTAAAAAAGTAAAAATA
TTTCAGGTTTTGTACAGA
3' upstream sequence
GCCATGTGTCTGTCGTGCTTGCCGCCCCTTCCATCCTCCTGTCACCCGTGGGGCACGTGA
CAATGGGGCCAGCTGACTCCAGCAGTCTCTGACCAGGTGCATCCTTGGGTAGGGGACATT
TCTTAGCCCCCATTGATGTCTGTAGCAAGCCGACAGAAGCCGCCCTGCCTGAGACAACTC
ACTGGAGTGACAGGCGTCCGCTATGGAGATGGTGGGACAATGCCGTAGGCAAGGCTGAAG
ATGCATCAGCCCTGTCTGGGGAAGAAGCTGATGACACCCTATGGACAACTACAAGAAGTG
GCCCTGCCCACTGGCCACAACCTGCTGAGCAGGTCCCTCTGCTCTCCCAGCCCCATAAGC
ACCCTGGTGTCACTCGCCCTGGAGGTGGGCGTGGCCTTCCTGTTTCTAGATAAAGAGCTG
GAGATGTGTGTGGCTGAGGTCATGCAGATACAAGGAGTCAGCAACGAGCCCTCTCTGCCA
ACCCCCTAAGCAAGCCTTGAAGCAGACCCCTAGGGATGGATATGAACTGGTTGGTGTGAT
TCCATGTGCCTATTGACATGTAACATCACATGGCCTTGGGTTGAGCCCCGTTAAGCCTTA
TGTTTTCTGGGGCCTGCTGGATACTCAGAAGAGACACTCCAACACATGCTGTGTGGCTGA
GTCCCTTGTGAGGGTAGGGGGACCAGCTACACCTCTTCCATGAGGGCGGGTCCCAGTGTT
GCCACTAGGTGGCGCCTTGGGCCCATGCTGAGCCGCAGGCTTCAGGCACCTGGGTGTGTA
TACCCCCTTCATGCCCTCAACCCTAATGAGCCACAGGATGATCTGATGTCCGTCCCCCCC
CCACACACACACACACACACGAGATCGCTCTGGCTGTCCCCACCCCAGCCCTGAAGCATA
AGCATCAACACCTAGCCCTGGTTACCTCCATGCCATGGCATCCCAGGTCTGACATCTGGG
GTCTCTCACTACCAGCTGGTTGGCAGGTTTGGAGCCCAGG..........

Sequence Detail Report

Gene Symbol (Gene ID) Phf2 (ENSMUSG00000038025)
Transcript ID ENSMUST00000035540
SNP Information
Strain :
Sequence Retrieve :
Exon translate :
CDS Start ( 1 ) - End ( 1097 )
-
Strand : forward reverse
Show sequence : nucleotide amino acid
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