MoG+ -Mouse Genome database with high added value-

Target CDS Information

Gene Symbol (Gene ID)

Car14 (ENSMUSG00000038526)

Cross Reference

CCDS	CCDS17625.1
EMBL	AB005450, BC046995
GO	GO:0004089, GO:0006885, GO:0008152, ...show all
goslim_goa	GO:0003674, GO:0005575, GO:0006810, ...show all
MGI_trans_name	Car14-001
OTTP	OTTMUSP00000025013
OTTT	OTTMUST00000052679
PDB	1RJ5, 1RJ6
protein_id	AAH46995.1, BAA78709.1
Reactome	R-MMU-1430728, R-MMU-1475029

RefSeq_mRNA	NM_011797.2
RefSeq_peptide	NP_035927
UCSC	uc008qls.1
UniParc	UPI000000BB59
Uniprot/SWISSPROT	Q9WVT6
Vega_transcript	Car14-001, OTTMUST00000052679
Vega_translation	188145, OTTMUSP00000025013

Definition

protein_id:ENSMUSP00000036983
translation:

MLFFALLLKVTWILAADGGHHWTYEGPHGQDHWPTSYPECGGDAQSPINIQTDSVIFDPD
LPAVQPHGYDQLGTEPLDLHNNGHTVQLSLPPTLHLGGLPRKYTAAQLHLHWGQRGSLEG
SEHQINSEATAAELHVVHYDSQSYSSLSEAAQKPQGLAVLGILIEVGETENPAYDHILSR
LHEIRYKDQKTSVPPFSVRELFPQQLEQFFRYNGSLTTPPCYQSVLWTVFNRRAQISMGQ
LEKLQETLSSTEEDPSEPLVQNYRVPQPLNQRTIFASFIQAGPLYTTGEMLGLGVGILAG
CLCLLLAVYFIAQKIRKKRLGNRKSVVFTSARATTEA

Chromosome

Length
Position(start - end)

6,227
95,898,146 - 95,904,374

Orient to Chromosome

minus

Link

Location : (3:95898146-95904374)
/

Detail Map

name	Aph1a (ENSMUSG00000015750)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : Aph1a note : anterior pharynx defective 1a homolog (C. elegans) [Source:MGI Symbol;Acc:MGI:2385110]

name	Car14 (ENSMUSG00000038526)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : Car14 note : carbonic anhydrase 14 [Source:MGI Symbol;Acc:MGI:1344341]

name	Aph1a (ENSMUSG00000015750)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000015894

name	Aph1a (ENSMUSG00000015750)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000056710

name	Car14 (ENSMUSG00000038526)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000036181

name	Car14 (ENSMUSG00000038526)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000147962

name	Aph1a (ENSMUSG00000015750) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS17624.1 RefSeq_peptide:NP_666216 RefSeq_mRNA:NM_146104.3 Vega_transcript:Aph1a-001 Vega_transcript:OTTMUST00000132681 Uniprot/SPTREMBL:Q6GTF1 UCSC:uc008qlr.2 Fantom:G370132I22 EMBL:AK148400 EMBL:BC057865 EMBL:CH466520 EMBL:CH466620 MGI_trans_name:Aph1a-001 Vega_translation:188142 Vega_translation:OTTMUSP00000070711 protein_id:AAH57865.1 protein_id:BAE28531.1 protein_id:EDL38853.1 protein_id:EDL39312.1 OTTP:OTTMUSP00000070711 OTTT:OTTMUST00000132681 UniParc:UPI0000021416
definition	note : transcript_id=ENSMUST00000015894 protein_id : ENSMUSP00000015894 translation : MGAAVFFGCTFVAFGPAFSLFLITVAGDPLRVIILVAGAFFWLVSLLLASVVWFILVHVTDRSDARLQYGLLIFGAAVSVLLQEVFRFAYYKLLKKADEGLASLSEDGRSPISIRQMAYVSGLSFGIISGVFSVINILADALGPGVVGIHGDSPYYFLTSAFLTAAIILLHTFWGVVFFDACERRRYWALGLVVGSHLLTSGLTFLNPWYEASLLPIYAVTVSMGLWAFITAGGSLRSIQRSLSCKD

name	Aph1a (ENSMUSG00000015750) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS50999.1 Uniprot/SWISSPROT:Q8BVF7 RefSeq_peptide:NP_666246 RefSeq_mRNA:NM_146134.2 Vega_transcript:Aph1a-002 Vega_transcript:OTTMUST00000132694 UCSC:uc008qlq.2 Fantom:6530402N02 EMBL:AK078343 EMBL:BC012406 EMBL:BC024111 GO:GO:0001656 GO:GO:0004175 GO:GO:0005515 GO:GO:0005515 GO:GO:0005783 GO:GO:0005783 GO:GO:0005789 GO:GO:0005794 GO:GO:0005794 GO:GO:0005886 GO:GO:0005887 GO:GO:0005887 GO:GO:0006509 GO:GO:0006509 GO:GO:0007219 GO:GO:0007220 GO:GO:0007220 GO:GO:0008233 GO:GO:0016020 GO:GO:0016020 GO:GO:0016021 GO:GO:0016485 GO:GO:0031293 GO:GO:0031293 GO:GO:0042987 GO:GO:0042987 GO:GO:0043085 MGI_trans_name:Aph1a-002 Vega_translation:188144 Vega_translation:OTTMUSP00000070720 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005737 goslim_goa:GO:0005783 goslim_goa:GO:0005794 goslim_goa:GO:0005886 goslim_goa:GO:0007165 goslim_goa:GO:0008150 goslim_goa:GO:0008233 goslim_goa:GO:0043226 goslim_goa:GO:0048856 goslim_goa:GO:0051604 protein_id:AAH12406.1 protein_id:AAH24111.1 protein_id:BAC37228.1 OTTP:OTTMUSP00000070720 OTTT:OTTMUST00000132694 Reactome:R-MMU-1236394 Reactome:R-MMU-1251985 Reactome:R-MMU-1266738 Reactome:R-MMU-157118 Reactome:R-MMU-162582 Reactome:R-MMU-166520 Reactome:R-MMU-193692 Reactome:R-MMU-193704 Reactome:R-MMU-1980143 Reactome:R-MMU-1980145 Reactome:R-MMU-1980148 Reactome:R-MMU-1980150 Reactome:R-MMU-204998 Reactome:R-MMU-205043 Reactome:R-MMU-2122948 Reactome:R-MMU-2682334 Reactome:R-MMU-2979096 Reactome:R-MMU-3928665 Reactome:R-MMU-422475 UniParc:UPI00000E594A
definition	note : transcript_id=ENSMUST00000056710 protein_id : ENSMUSP00000058846 translation : MGAAVFFGCTFVAFGPAFSLFLITVAGDPLRVIILVAGAFFWLVSLLLASVVWFILVHVTDRSDARLQYGLLIFGAAVSVLLQEVFRFAYYKLLKKADEGLASLSEDGRSPISIRQMAYVSGLSFGIISGVFSVINILADALGPGVVGIHGDSPYYFLTSAFLTAAIILLHTFWGVVFFDACERRRYWALGLVVGSHLLTSGLTFLNPWYEASLLPIYAVTVSMGLWAFITAGGSLRSIQRSLSCRRQEDSRVMVYSALRIPPED

name	Car14 (ENSMUSG00000038526) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS17625.1 Uniprot/SWISSPROT:Q9WVT6 RefSeq_peptide:NP_035927 RefSeq_mRNA:NM_011797.2 Vega_transcript:Car14-001 Vega_transcript:OTTMUST00000052679 UCSC:uc008qls.1 EMBL:AB005450 EMBL:BC046995 GO:GO:0004089 GO:GO:0006885 GO:GO:0008152 GO:GO:0015670 GO:GO:0016021 GO:GO:0046872 MGI_trans_name:Car14-001 PDB:1RJ5 PDB:1RJ6 Vega_translation:188145 Vega_translation:OTTMUSP00000025013 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0006810 goslim_goa:GO:0008150 goslim_goa:GO:0016829 goslim_goa:GO:0042592 goslim_goa:GO:0043167 protein_id:AAH46995.1 protein_id:BAA78709.1 OTTP:OTTMUSP00000025013 OTTT:OTTMUST00000052679 Reactome:R-MMU-1430728 Reactome:R-MMU-1475029 UniParc:UPI000000BB59
definition	note : transcript_id=ENSMUST00000036181 protein_id : ENSMUSP00000036983 translation : MLFFALLLKVTWILAADGGHHWTYEGPHGQDHWPTSYPECGGDAQSPINIQTDSVIFDPDLPAVQPHGYDQLGTEPLDLHNNGHTVQLSLPPTLHLGGLPRKYTAAQLHLHWGQRGSLEGSEHQINSEATAAELHVVHYDSQSYSSLSEAAQKPQGLAVLGILIEVGETENPAYDHILSRLHEIRYKDQKTSVPPFSVRELFPQQLEQFFRYNGSLTTPPCYQSVLWTVFNRRAQISMGQLEKLQETLSSTEEDPSEPLVQNYRVPQPLNQRTIFASFIQAGPLYTTGEMLGLGVGILAGCLCLLLAVYFIAQKIRKKRLGNRKSVVFTSARATTEA

name	Car14 (ENSMUSG00000038526) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:Car14-003 Vega_transcript:OTTMUST00000052681 Uniprot/SPTREMBL:D3Z4J8 EMBL:AC092855 GO:GO:0004089 GO:GO:0006885 GO:GO:0015670 MGI_trans_name:Car14-003 Vega_translation:188146 Vega_translation:OTTMUSP00000041814 goslim_goa:GO:0003674 goslim_goa:GO:0006810 goslim_goa:GO:0008150 goslim_goa:GO:0016829 goslim_goa:GO:0042592 OTTP:OTTMUSP00000041814 OTTT:OTTMUST00000052681 UniParc:UPI000173A7FD
definition	note : transcript_id=ENSMUST00000147962 protein_id : ENSMUSP00000117464 translation : MKLHCSETTGPHGQDHWPTSYPECGGDAQSPINIQTDSVIFDPDLPAVQPHGYDQLGTEPLDLHNNGHTVQLSLPPTLHLGGLPRKYTAAQLHLHWGQRGSLEGSEHQINSEATAAELHVVHYDSQSYSSLSEAAQKPQGLAVLGILIEVGETENPAYDHILSRLHEIRYK

name
type	STS
link
xref	UniSTS_NUM:163316 UniSTS:AB005450 UniSTS:AW536446 WI_MRC-RH:953038
definition	note : map_weight=1 standard_name : AB005450

name
type	STS
link
xref	UniSTS_NUM:207536 UniSTS:AI173904 WI_MRC-RH:384298
definition	note : map_weight=1 standard_name : AI173904

name
type	misc_feature
link
xref
definition	note : contig AC092855.39 48387..249205(1)

name	Aph1a (ENSMUSG00000015750)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000132695 Vega_transcript:OTTMUST00000132695 MGI_trans_name:Aph1a-003 OTTT:OTTMUST00000132695
definition	note : retained_intron note : transcript_id=ENSMUST00000197232

name	Car14 (ENSMUSG00000038526)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000052680 Vega_transcript:OTTMUST00000052680 MGI_trans_name:Car14-002 OTTT:OTTMUST00000052680
definition	note : retained_intron note : transcript_id=ENSMUST00000149202

name	Car14 (ENSMUSG00000038526)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000052682 Vega_transcript:OTTMUST00000052682 MGI_trans_name:Car14-004 OTTT:OTTMUST00000052682
definition	note : retained_intron note : transcript_id=ENSMUST00000126722

Polymorphisms Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Car14 (ENSMUSG00000038526)
Transcript ID	ENSMUST00000036181

Reports
substitution
cSNPs	1
Insertion	9
Deletion	13
SNPs	+1kb 95904764(c.-390T>A), 95904862(c.-488C>T), 95904941(c.-567C>A), 95904954(c.-580A>T), 95905184(c.-810C>T), 95905802(c.-1428A>T), 95905895(c.-1521G>A), 95905973(c.-1599A>T), 95906189(c.-1815A>G), 95906279(c.-1905G>A), 95906337(c.-1963A>G), 95906943(c.-2569T>C), 95907381(c.-3007T>C), 95907716(c.-3342A>G), 95908104(c.-3730T>C), 95908105(c.-3731G>A), 95908215(c.-3841A>G), 95909010(c.-4636C>T), 95909011(c.-4637C>T), 95909120(c.-4746C>T), 95909195(c.-4821C>T), 95909212(c.-4838T>G), 95909275(c.-4901T>C), 95909338(c.-4964G>A), 95909392(c.-5018A>G), 5'UTR 95904442(c.-68C>T), CDS 95898191(c.969G>A), 3'UTR 95898007(c.139C>T), 95898034(c.112A>C), INTRON 95898289(c.948-77T>A), 95898703(c.947+98T>C), 95898722(c.947+79C>T), 95898780(c.947+21C>T), 95899087(c.842-90G>A), 95899825(c.496-19T>C), 95900876(c.256+217A>C), 95900932(c.256+161G>A), 95902062(c.76+49T>C), 95902103(c.76+8T>C), 95902208(c.56-77T>C), 95902253(c.56-122T>G), 95902292(c.56-161T>C), 95902359(c.56-228C>T), 95903512(c.55+808A>G), 95903768(c.55+552A>G), 95904144(c.55+176G>A), 95904149(c.55+171A>G), -1kb 95892953(c.5193T>G), 95893202(c.4944T>G), 95893794(c.4352T>A), 95893814(c.4332T>A), 95893922(c.4224T>C), 95895021(c.3125C>A), 95895699(c.2447G>A), 95895892(c.2254A>G), 95896980(c.1166T>A), 95897517(c.629C>T), 95897526(c.*620G>A),
Insertions	+1kb 95905951 (c.-1578_-1577insT), 95906066 (c.-1693_-1692insT), 95906696 (c.-2323_-2322insTT), 95906818 (c.-2445_-2444insGTCTCCC), 95908458 (c.-4085_-4084insAAAA), 95908700 (c.-4327_-4326insAAA), 5'UTR CDS 3'UTR INTRON 95898304 (c.948-93_948-92insGG), 95902940 (c.56-810_56-809insC), 95903490 (c.55+829_55+830insGGAGGA), -1kb
Deletions	+1kb 95906441 (c.-2068delT), 95906673 (c.-2300delT), 95908625 (c.-4252delA), 95909246 (c.-4876_-4873delAGCA), 5'UTR CDS 3'UTR INTRON 95899038 (c.842-42delA), 95899411 (c.720+18_720+19delAG), 95900628 (c.257-245_257-244delCA), 95902219 (c.56-89delA), 95903057 (c.56-930_56-927delAAAA), 95903713 (c.55+606delT), 95904218 (c.55+99_55+101delTAG), -1kb 95895434 (c.2711delG), 95897750 (c.395delT),
coding sequence substitutions
premature termination by the nucleotide substitution	0
synonymous num	1
non-synonymous num	0
synonymous substitutions	95898191 (p.Arg323Arg),
non-synonymous substitutions
B6 transcript (ENSMUST00000036181)	MLFFALLLKVTWILAADGGHHWTYEGPHGQDHWPTSYPECGGDAQSPINIQTDSVIFDPD LPAVQPHGYDQLGTEPLDLHNNGHTVQLSLPPTLHLGGLPRKYTAAQLHLHWGQRGSLEG SEHQINSEATAAELHVVHYDSQSYSSLSEAAQKPQGLAVLGILIEVGETENPAYDHILSR LHEIRYKDQKTSVPPFSVRELFPQQLEQFFRYNGSLTTPPCYQSVLWTVFNRRAQISMGQ LEKLQETLSSTEEDPSEPLVQNYRVPQPLNQRTIFASFIQAGPLYTTGEMLGLGVGILAG CLCLLLAVYFIAQKIRKKRLGNRKSVVFTSARATTEA*
MSMv4 transcript	MLFFALLLKVTWILAADGGHHWTYEGPHGQDHWPTSYPECGGDAQSPINIQTDSVIFDPD LPAVQPHGYDQLGTEPLDLHNNGHTVQLSLPPTLHLGGLPRKYTAAQLHLHWGQRGSLEG SEHQINSEATAAELHVVHYDSQSYSSLSEAAQKPQGLAVLGILIEVGETENPAYDHILSR LHEIRYKDQKTSVPPFSVRELFPQQLEQFFRYNGSLTTPPCYQSVLWTVFNRRAQISMGQ LEKLQETLSSTEEDPSEPLVQNYRVPQPLNQRTIFASFIQAGPLYTTGEMLGLGVGILAG CLCLLLAVYFIAQKIRKKRLGNRKSVVFTSARATTEA*
homology	100.00 (338 / 338)

Exon Detail Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Car14 (ENSMUSG00000038526)
Transcript ID	ENSMUST00000036181


..........TACATTCCGATCGGGATTTCTAGTCCCGTGGGGGAGCGCACACCAGCCAC
ATTCCTGAGACGCCACGCAGCCTCCATGCTCCACTAGCAAACTCAGTTCCACCACAGCAA
GTTTCACTTGATCCCACAGGACCTGCCTGGACCCTTTGTTGGGTGGGCGGGAAGCCCCTG
GACCCCTCACCCACCTGGTCACATGGCCTTTCTATGGCCCCTCCCCTCTCTTTCTTTGGA
GTCCGCCTTTTTCTCATGGTGACAGTAATTGTTTCTACAGTCACCCATCACTCCTCCTGC
CCGGCCTCTCTGCTAGGGGTCAGTGTCCTCTTCAGTGACAAAAGGCGCCCTAGATCTGGG
CTCCCTGGGGAGGGAGGTGGCTGGATCTGGTAGTTAGAATGCTGTCTCTCCCTGGTGCTG
CGACAACCCCTCCCCCGCTGTGCACACAAATGGGCTTTATCCGGCAAACAAAACCGCACC
CCCACCCCAGGCTACACAGGCACGTGGACCTAAGCCTTACCAAGGGAAGGGGGTGGTGAC
AGGCGCCAGAGAAAGACGAGGCAGAAGACAAATATTCTCCTCGCCCCACTTCTTGCTCTC
CACAATCCAGATTTTAAAGTTTGACTTTCCACTCCCCACCTGCTCCCTGAGCCTCCAACT
TCTGTTCTCCTATCTCCCGAATCTGAATTCTTTCTGGTTCCAACCAGCTCAACTTCTCTT
GGTTTCAGAAACAGGTTCCCCACCAGCTGTCCCATACCACACAGGGATGTGCTCCTCAGG
CAGGGGAATGAGAACACGGTGTCCTGGGAGGGAGAGGTGCGAAACCCCCCTTCCCTGACT
GAGAGTTCCAGGGGACACCCGTACGAGCGGCAGTGTAAATAGCAAAGGAAGAGCTCACTC
CAGGGTCCTGAGCCAAGGCCAGGGCGCTGGGCTCTGCAGGGCCATCCTGCATGCCTAATC
CGCTATTTAAGGAGCTGCTCGGCTGCAGCCCAGGCACCACCCCCCTCCTC
ACGTACACCGGTTTCGAGCCACCTTAAAAGCGGGAGGCAACTGTGAAGTTGCTGGCCAGTAAGTGGTGTGGAGATTACGAAGGGACATACGGAGAGGGCAGAGAGAGGAAGAGAGAGAAAGTGAGAGAGGAAGAAATTTATCCTGGGATCCAGAAGTTCGTGTTAACCTGTGGAAAATCAAGTCCCTGGAAGTCTGCAGAGACAGAGACAAGAAGAAAAGAGATAGAACGCCAGAAACTCCTCTCTCTCTCTCCCTCTCCACCTCTCTCTTCTAAACCCCAAATTCCTGGTCCCTTGTACCCCATTGTGGGGATAATATGTTGTTCTTCGCTCTCCTGTTAAAGGTGACTTGGATCCTGGCTGCAGATGGGG
GTAGGTACAACTGGGTCTGTGCTAA..........CACAGCCCAAATCCCTCTCTTACAG
GTCACCACTGGACATATGAAG
GTGAGATCGGAACTGCACATGGATT..........CTATAGTAACTTACCCCTCCACCAG
GCCCACACGGTCAGGACCATTGGCCAACCTCTTATCCTGAGTGTGGAGGCGATGCCCAGTCCCCCATCAATATCCAGACAGACAGTGTGATATTTGACCCCGATCTGCCTGCTGTACAGCCCCATGGATATGACCAGCTTGGGACTGAGCCTTTGGATCTACACAATAATGGCCATACAG
GTAAAAGAGCCAGCTTCAAATAACT..........ATCCTAGCCTGCTCTTTCCCCACAG
TGCAGCTTTCCCTGCCCCCAACCCTGCACCTGGGTGGACTGCCCCGAAAATACACAGCAGCCCAGCTCCACCTGCACTGGGGTCAGAGAGGATCCCTCGAGGGATCAGAGCACCAGATCAACAGTGAAGCCACGGCTGCGGAG
GTACCGGGGAACTCGGGCTAGGACA..........TTTGTTTCCTTCTGTCCCCCTGCAG
CTCCACGTGGTTCACTATGACTCCCAGTCCTACAGCAGCTTGAGTGAGGCAGCTCAGAAGCCACAGGGCCTGGCTGTCCTAGGCATCCTCATTGAG
GTCAGCATCCCCCAGCCCCTCTCAG..........GTCTATCGGCACATTGCCTTTGCAG
GTGGGCGAGACTGAGAATCCAGCTTATGATCACATTCTGAGTCGTCTACATGAAATAAGATACAAAG
GTGAGCCCTAAAAACCTACAGTAAG..........CTGACCCTCGCTCCGTCCTCCCCAG
ATCAGAAGACCTCTGTGCCTCCCTTCAGCGTGAGAGAGCTGTTCCCCCAACAGCTGGAGCAATTCTTCCGCTACAACGGCTCACTCACAACTCCCCCCTGCTACCAGAGTGTGCTCTGGACAGTCTTCAACAGAAGGGCCCAGATTTCAATGGGACAG
GTGTGTGAGTAGTGGAGAGGGAATA..........TGATTTCTCCATGTCTGCTCCCCAG
TTAGAGAAGCTCCAGGAGACATTGTCCTCTACAGAAGAGGACCCCTCTGAGCCCCTTGTACAGAACTACAGAGTCCCCCAGCCTCTCAACCAGAGGACCATCTTTGCTTCTTTCATCCAAG
GTGACTTGCAGGGCTCAGAAGAGAT..........TAACCCAAGTTCCCTTCCTCTGCAG
CAGGACCACTGTATACCACAG
GTAAGAGGGTCCTATGTGGCAGCAC..........GAGCTGACATCCTTATTTCCCCCAG
GAGAGATGCTGGGTCTAGGTGTGGGAATCTTGGCTGGATGTCTTTGCCTTCTGCTGGCTGTTTATTTCATCGCTCAAAAAATTAG
GTGAGATCCTACTTTCTATTTCTGC..........CATGAACCATTGCTCCCCTTTCCAG
GAAGAAGCGGCTGGGAAACAGAAAAAGTGTGGTTTTCACCTCTGCTCGGGCTACCACAGAGGCGTGAACTCTGTCTCAAGATGCTGCAGATGCCTCCCTCTCCTCCTGCCAGGGAGCCTCTCTGAGGGCTGCAGGCACTGGACGACCAGTTGTAGGCAGGCACGTGTCCTGCTAGGTACCCCTCTCTATACACCAGGGACCCCAGTTCTTCAGGAAGGGCTGAGCCTTTGGCCTTCAAAGCTGTGGATGAGGAGATTCCCTGTCCTCATGCTTGGTTGGAAGAAGCTGAGGATAAACTGCCATCTTTCACCTCACACCGCCATGTTCTCTCCCTTAGATATACGTTGTAGTTTTTTTTTTTCCTCTAGGAAAAAAGGGCTGCTGCTGGGATTTTAATTATTTTTTGCTCAATATATGTTTGGAAATTAAAAGTTTTTGATCTTAA
TTCTTGAATGTTTTTTTGTGGCTTTCAAGAGTGGGAGAGTTCCTCTGTCTGTTGAGTGGC
AGAGATAGACATAGAGAAAGAGAAGGGGCAGGGGTATGATTAATTAACTCCTTGTATCCT
GTTCCTGGACAAGGGAGACCTACTTCTAGGAAGTTAACTTCCACAAGTTACACCACTAAT
GATGCTTCTCTCATCACACCAATGGTGAACATCACAGGCACTTGGCTAGGGAGGATGGAC
CAGAGCCACCTGGAGCTAGAAATCTCAATCCATTACCCCTCTTAAAGCCAAGTCCCCCCA
CAATTATAAAGTCCTTTTTATTAGTCAAAATCACAATCACCTTGATTAAAAGGACAGAAT
ATTCCACCCTCAGCAGAAAAACAACACAGTGATAGAAAACCTCCCCAAACCCTCCCACAC
CCCAATTAAAAACTAGAAAAAATGTCTGCCCTCTGGGCCTGCGATGCCATGGTAGTCTGA
CTCCTTCAGGGCACTGCCATGGAGTGGGCAGGCCCCCACAGCACCCTCCATTTCACCTTG
GGGAAAGGAGGGGTGCTGACGGCCATGGACGTTAGGATAGAGATCCAGTGGGACCAGTCC
CCAAGCATGCACTTCCTTCCTTTCCCCCAGGGCCTGGGACCAAAGGGAAAACAGGATAGA
AATGAGCCACCATCAGCAGATTTGGGAGCAAACACAGCCTATGGAGGTTAAAGAGGCTCC
CGGCGTACCTCCTCCCTCTCCCCACTTTAAAAAAAAGGCATTTTGGGGTCTTTATCATAC
CAAAAAAAGGTTCCTTTCAGACCTGAGAAAAAGACCAAGATGTCCAGTCTGGGCAGGAGA
CACTGAACTGAACCCATCTACCCTCAGCCTCAGTAACTTCATCTCCAGGGCCATGGCTAA
GCTAGGTCCCTTTTCTTGGCAACCTGCACTGTCCAGAACTGGAGATGGAGAAATACGGGA
CGAGGAGATCGGGAGGGCACCCCAGGCCCAGGGGCCCCCC..........

No.	Exon / Intron	Start	End	Start Phase	End Phase	Length	Sequence
	5' upstream sequence						..........TACATTCCGATCGGGATTTCTAGTCCCGTGGGGGAGCGCACACCAGCCAC ATTCCTGAGACGCCACGCAGCCTCCATGCTCCACTAGCAAACTCAGTTCCACCACAGCAA GTTTCACTTGATCCCACAGGACCTGCCTGGACCCTTTGTTGGGTGGGCGGGAAGCCCCTG GACCCCTCACCCACCTGGTCACATGGCCTTTCTATGGCCCCTCCCCTCTCTTTCTTTGGA GTCCGCCTTTTTCTCATGGTGACAGTAATTGTTTCTACAGTCACCCATCACTCCTCCTGC CCGGCCTCTCTGCTAGGGGTCAGTGTCCTCTTCAGTGACAAAAGGCGCCCTAGATCTGGG CTCCCTGGGGAGGGAGGTGGCTGGATCTGGTAGTTAGAATGCTGTCTCTCCCTGGTGCTG CGACAACCCCTCCCCCGCTGTGCACACAAATGGGCTTTATCCGGCAAACAAAACCGCACC CCCACCCCAGGCTACACAGGCACGTGGACCTAAGCCTTACCAAGGGAAGGGGGTGGTGAC AGGCGCCAGAGAAAGACGAGGCAGAAGACAAATATTCTCCTCGCCCCACTTCTTGCTCTC CACAATCCAGATTTTAAAGTTTGACTTTCCACTCCCCACCTGCTCCCTGAGCCTCCAACT TCTGTTCTCCTATCTCCCGAATCTGAATTCTTTCTGGTTCCAACCAGCTCAACTTCTCTT GGTTTCAGAAACAGGTTCCCCACCAGCTGTCCCATACCACACAGGGATGTGCTCCTCAGG CAGGGGAATGAGAACACGGTGTCCTGGGAGGGAGAGGTGCGAAACCCCCCTTCCCTGACT GAGAGTTCCAGGGGACACCCGTACGAGCGGCAGTGTAAATAGCAAAGGAAGAGCTCACTC CAGGGTCCTGAGCCAAGGCCAGGGCGCTGGGCTCTGCAGGGCCATCCTGCATGCCTAATC CGCTATTTAAGGAGCTGCTCGGCTGCAGCCCAGGCACCACCCCCCTCCTC
1	EXON 1	95,904,320	95,904,691	-	1	372	ACGTACACCGGTTTCGAGCCACCTTAAAAGCGGGAGGCAACTGTGAAGTTGCTGGCCAGT AAGTGGTGTGGAGATTACGAAGGGACATACGGAGAGGGCAGAGAGAGGAAGAGAGAGAAA GTGAGAGAGGAAGAAATTTATCCTGGGATCCAGAAGTTCGTGTTAACCTGTGGAAAATCA AGTCCCTGGAAGTCTGCAGAGACAGAGACAAGAAGAAAAGAGATAGAACGCCAGAAACTC CTCTCTCTCTCTCCCTCTCCACCTCTCTCTTCTAAACCCCAAATTCCTGGTCCCTTGTAC CCCATTGTGGGGATAATATGTTGTTCTTCGCTCTCCTGTTAAAGGTGACTTGGATCCTGG CTGCAGATGGGG
	INTRON 1 - 2	95,902,132	95,904,319			2,188	GTAGGTACAACTGGGTCTGTGCTAA..........CACAGCCCAAATCCCTCTCTTACAG
2	EXON 2	95,902,111	95,902,131	1	1	21	GTCACCACTGGACATATGAAG
	INTRON 2 - 3	95,901,273	95,902,110			838	GTGAGATCGGAACTGCACATGGATT..........CTATAGTAACTTACCCCTCCACCAG
3	EXON 3	95,901,093	95,901,272	1	1	180	GCCCACACGGTCAGGACCATTGGCCAACCTCTTATCCTGAGTGTGGAGGCGATGCCCAGT CCCCCATCAATATCCAGACAGACAGTGTGATATTTGACCCCGATCTGCCTGCTGTACAGC CCCATGGATATGACCAGCTTGGGACTGAGCCTTTGGATCTACACAATAATGGCCATACAG
	INTRON 3 - 4	95,900,386	95,901,092			707	GTAAAAGAGCCAGCTTCAAATAACT..........ATCCTAGCCTGCTCTTTCCCCACAG
4	EXON 4	95,900,243	95,900,385	1	0	143	TGCAGCTTTCCCTGCCCCCAACCCTGCACCTGGGTGGACTGCCCCGAAAATACACAGCAG CCCAGCTCCACCTGCACTGGGGTCAGAGAGGATCCCTCGAGGGATCAGAGCACCAGATCA ACAGTGAAGCCACGGCTGCGGAG
	INTRON 4 - 5	95,900,027	95,900,242			216	GTACCGGGGAACTCGGGCTAGGACA..........TTTGTTTCCTTCTGTCCCCCTGCAG
5	EXON 5	95,899,931	95,900,026	0	0	96	CTCCACGTGGTTCACTATGACTCCCAGTCCTACAGCAGCTTGAGTGAGGCAGCTCAGAAG CCACAGGGCCTGGCTGTCCTAGGCATCCTCATTGAG
	INTRON 5 - 6	95,899,807	95,899,930			124	GTCAGCATCCCCCAGCCCCTCTCAG..........GTCTATCGGCACATTGCCTTTGCAG
6	EXON 6	95,899,740	95,899,806	0	1	67	GTGGGCGAGACTGAGAATCCAGCTTATGATCACATTCTGAGTCGTCTACATGAAATAAGA TACAAAG
	INTRON 6 - 7	95,899,589	95,899,739			151	GTGAGCCCTAAAAACCTACAGTAAG..........CTGACCCTCGCTCCGTCCTCCCCAG
7	EXON 7	95,899,431	95,899,588	1	0	158	ATCAGAAGACCTCTGTGCCTCCCTTCAGCGTGAGAGAGCTGTTCCCCCAACAGCTGGAGC AATTCTTCCGCTACAACGGCTCACTCACAACTCCCCCCTGCTACCAGAGTGTGCTCTGGA CAGTCTTCAACAGAAGGGCCCAGATTTCAATGGGACAG
	INTRON 7 - 8	95,899,345	95,899,430			86	GTGTGTGAGTAGTGGAGAGGGAATA..........TGATTTCTCCATGTCTGCTCCCCAG
8	EXON 8	95,899,224	95,899,344	0	1	121	TTAGAGAAGCTCCAGGAGACATTGTCCTCTACAGAAGAGGACCCCTCTGAGCCCCTTGTA CAGAACTACAGAGTCCCCCAGCCTCTCAACCAGAGGACCATCTTTGCTTCTTTCATCCAA G
	INTRON 8 - 9	95,898,998	95,899,223			226	GTGACTTGCAGGGCTCAGAAGAGAT..........TAACCCAAGTTCCCTTCCTCTGCAG
9	EXON 9	95,898,977	95,898,997	1	1	21	CAGGACCACTGTATACCACAG
	INTRON 9 - 10	95,898,886	95,898,976			91	GTAAGAGGGTCCTATGTGGCAGCAC..........GAGCTGACATCCTTATTTCCCCCAG
10	EXON 10	95,898,801	95,898,885	1	2	85	GAGAGATGCTGGGTCTAGGTGTGGGAATCTTGGCTGGATGTCTTTGCCTTCTGCTGGCTG TTTATTTCATCGCTCAAAAAATTAG
	INTRON 10 - 11	95,898,213	95,898,800			588	GTGAGATCCTACTTTCTATTTCTGC..........CATGAACCATTGCTCCCCTTTCCAG
11	EXON 11	95,897,768	95,898,212	2	-	445	GAAGAAGCGGCTGGGAAACAGAAAAAGTGTGGTTTTCACCTCTGCTCGGGCTACCACAGA GGCGTGAACTCTGTCTCAAGATGCTGCAGATGCCTCCCTCTCCTCCTGCCAGGGAGCCTC TCTGAGGGCTGCAGGCACTGGACGACCAGTTGTAGGCAGGCACGTGTCCTGCTAGGTACC CCTCTCTATACACCAGGGACCCCAGTTCTTCAGGAAGGGCTGAGCCTTTGGCCTTCAAAG CTGTGGATGAGGAGATTCCCTGTCCTCATGCTTGGTTGGAAGAAGCTGAGGATAAACTGC CATCTTTCACCTCACACCGCCATGTTCTCTCCCTTAGATATACGTTGTAGTTTTTTTTTT TCCTCTAGGAAAAAAGGGCTGCTGCTGGGATTTTAATTATTTTTTGCTCAATATATGTTT GGAAATTAAAAGTTTTTGATCTTAA
	3' upstream sequence						TTCTTGAATGTTTTTTTGTGGCTTTCAAGAGTGGGAGAGTTCCTCTGTCTGTTGAGTGGC AGAGATAGACATAGAGAAAGAGAAGGGGCAGGGGTATGATTAATTAACTCCTTGTATCCT GTTCCTGGACAAGGGAGACCTACTTCTAGGAAGTTAACTTCCACAAGTTACACCACTAAT GATGCTTCTCTCATCACACCAATGGTGAACATCACAGGCACTTGGCTAGGGAGGATGGAC CAGAGCCACCTGGAGCTAGAAATCTCAATCCATTACCCCTCTTAAAGCCAAGTCCCCCCA CAATTATAAAGTCCTTTTTATTAGTCAAAATCACAATCACCTTGATTAAAAGGACAGAAT ATTCCACCCTCAGCAGAAAAACAACACAGTGATAGAAAACCTCCCCAAACCCTCCCACAC CCCAATTAAAAACTAGAAAAAATGTCTGCCCTCTGGGCCTGCGATGCCATGGTAGTCTGA CTCCTTCAGGGCACTGCCATGGAGTGGGCAGGCCCCCACAGCACCCTCCATTTCACCTTG GGGAAAGGAGGGGTGCTGACGGCCATGGACGTTAGGATAGAGATCCAGTGGGACCAGTCC CCAAGCATGCACTTCCTTCCTTTCCCCCAGGGCCTGGGACCAAAGGGAAAACAGGATAGA AATGAGCCACCATCAGCAGATTTGGGAGCAAACACAGCCTATGGAGGTTAAAGAGGCTCC CGGCGTACCTCCTCCCTCTCCCCACTTTAAAAAAAAGGCATTTTGGGGTCTTTATCATAC CAAAAAAAGGTTCCTTTCAGACCTGAGAAAAAGACCAAGATGTCCAGTCTGGGCAGGAGA CACTGAACTGAACCCATCTACCCTCAGCCTCAGTAACTTCATCTCCAGGGCCATGGCTAA GCTAGGTCCCTTTTCTTGGCAACCTGCACTGTCCAGAACTGGAGATGGAGAAATACGGGA CGAGGAGATCGGGAGGGCACCCCAGGCCCAGGGGCCCCCC..........

Sequence Detail Report

Gene Symbol (Gene ID)	Car14 (ENSMUSG00000038526)
Transcript ID	ENSMUST00000036181

		SNP Information
Strain :
Sequence Retrieve :
Exon translate : CDS Start ( 1 ) - End ( 338 ) -
Strand :	forward reverse
Show sequence :	nucleotide amino acid
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