MoG+ -Mouse Genome database with high added value-

Target CDS Information

Gene Symbol (Gene ID)

Sncb (ENSMUSG00000034891)

Cross Reference

CCDS	CCDS36670.1
EMBL	AF348162, AF348163, AF348164, ...show all
GO	GO:0005509, GO:0005509, GO:0005654, ...show all
goslim_goa	GO:0003674, GO:0005575, GO:0005622, ...show all
MGI_trans_name	Sncb-001
OTTP	OTTMUSP00000043434
OTTT	OTTMUST00000081255
protein_id	AAH19409.1, AAK83238.1
RefSeq_mRNA	NM_033610.2
RefSeq_peptide	NP_291088

RefSeq_peptide_predicted	XP_006517078.1, XP_006517079.1
UCSC	uc007qpc.1
UniParc	UPI00000298C2
Uniprot/SWISSPROT	Q91ZZ3
Vega_transcript	OTTMUST00000081255, Sncb-001
Vega_translation	214522, OTTMUSP00000043434

Definition

protein_id:ENSMUSP00000043074
translation:

MDVFMKGLSMAKEGVVAAAEKTKQGVTEAAEKTKEGVLYVGSKTSGVVQGVASVAEKTKE
QASHLGGAVFSGAGNIAAATGLVKKEEFPTDLKPEEVAQEAAEEPLIEPLMEPEGESYED
SPQEEYQEYEPEA

Chromosome

Length
Position(start - end)

6,173
54,759,509 - 54,765,683

Orient to Chromosome

minus

Link

Location : (13:54759509-54765683)
/

Detail Map

name	Sncb (ENSMUSG00000034891)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : Sncb note : synuclein, beta [Source:MGI Symbol;Acc:MGI:1889011]

name	Sncb (ENSMUSG00000034891)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000036825

name	Sncb (ENSMUSG00000034891)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000134110

name	Sncb (ENSMUSG00000034891) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS36670.1 Uniprot/SWISSPROT:Q91ZZ3 RefSeq_peptide:NP_291088 RefSeq_mRNA:NM_033610.2 RefSeq_peptide_predicted:XP_006517078.1 RefSeq_peptide_predicted:XP_006517079.1 Vega_transcript:OTTMUST00000081255 Vega_transcript:Sncb-001 UCSC:uc007qpc.1 EMBL:AF348162 EMBL:AF348163 EMBL:AF348164 EMBL:BC019409 GO:GO:0005509 GO:GO:0005509 GO:GO:0005654 GO:GO:0005654 GO:GO:0005737 GO:GO:0005737 GO:GO:0005739 GO:GO:0005794 GO:GO:0005794 GO:GO:0007268 GO:GO:0016234 GO:GO:0016234 GO:GO:0042417 GO:GO:0043524 GO:GO:0045202 GO:GO:0050808 MGI_trans_name:Sncb-001 Vega_translation:214522 Vega_translation:OTTMUSP00000043434 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0005737 goslim_goa:GO:0005739 goslim_goa:GO:0005794 goslim_goa:GO:0007267 goslim_goa:GO:0008150 goslim_goa:GO:0043167 goslim_goa:GO:0043226 protein_id:AAH19409.1 protein_id:AAK83238.1 OTTP:OTTMUSP00000043434 OTTT:OTTMUST00000081255 UniParc:UPI00000298C2
definition	note : transcript_id=ENSMUST00000036825 protein_id : ENSMUSP00000043074 translation : MDVFMKGLSMAKEGVVAAAEKTKQGVTEAAEKTKEGVLYVGSKTSGVVQGVASVAEKTKEQASHLGGAVFSGAGNIAAATGLVKKEEFPTDLKPEEVAQEAAEEPLIEPLMEPEGESYEDSPQEEYQEYEPEA

name	Sncb (ENSMUSG00000034891) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS36670.1 Uniprot/SWISSPROT:Q91ZZ3 RefSeq_peptide_predicted:XP_006517078.1 RefSeq_peptide_predicted:XP_006517079.1 Vega_transcript:OTTMUST00000081258 Vega_transcript:Sncb-004 UCSC:uc007qpc.1 EMBL:AF348162 EMBL:AF348163 EMBL:AF348164 EMBL:BC019409 GO:GO:0005509 GO:GO:0005654 GO:GO:0005737 GO:GO:0005739 GO:GO:0005794 GO:GO:0007268 GO:GO:0016234 GO:GO:0042417 GO:GO:0043524 GO:GO:0045202 GO:GO:0050808 MGI_trans_name:Sncb-004 Vega_translation:214523 Vega_translation:OTTMUSP00000043435 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0005737 goslim_goa:GO:0005739 goslim_goa:GO:0005794 goslim_goa:GO:0007267 goslim_goa:GO:0008150 goslim_goa:GO:0043167 goslim_goa:GO:0043226 protein_id:AAH19409.1 protein_id:AAK83238.1 OTTP:OTTMUSP00000043435 OTTT:OTTMUST00000081258 UniParc:UPI00000298C2
definition	note : transcript_id=ENSMUST00000134110 protein_id : ENSMUSP00000116296 translation : MDVFMKGLSMAKEGVVAAAEKTKQGVTEAAEKTKEGVLYVGSKTSGVVQGVASVAEKTKEQASHLGGAVFSGAGNIAAATGLVKKEEFPTDLKPEEVAQEAAEEPLIEPLMEPEGESYEDSPQEEYQEYEPEA

name
type	STS
link
xref	UniSTS_NUM:164115 UniSTS:AI838531 WI_MRC-RH:659473
definition	note : map_weight=1 standard_name : AI838531

name
type	STS
link
xref	UniSTS_NUM:231355 UniSTS:Sncb
definition	note : map_weight=1 standard_name : Sncb

name
type	misc_feature
link
xref
definition	note : contig AC162526.3 61529..219418(1)

name	Sncb (ENSMUSG00000034891)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000081256 Vega_transcript:OTTMUST00000081256 MGI_trans_name:Sncb-002 OTTT:OTTMUST00000081256
definition	note : retained_intron note : transcript_id=ENSMUST00000153829

name	Sncb (ENSMUSG00000034891)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000081257 Vega_transcript:OTTMUST00000081257 MGI_trans_name:Sncb-003 OTTT:OTTMUST00000081257
definition	note : retained_intron note : transcript_id=ENSMUST00000138067

Polymorphisms
Exon
Sequence

Polymorphisms Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Sncb (ENSMUSG00000034891)
Transcript ID	ENSMUST00000036825

Reports
substitution
cSNPs	0
Insertion	5
Deletion	5
SNPs	+1kb 54766695(c.-1012G>A), 54766823(c.-1140A>G), 54766860(c.-1177T>G), 54767075(c.-1392T>A), 54767168(c.-1485G>C), 54767213(c.-1530T>G), 54767355(c.-1672G>A), 54767361(c.-1678G>T), 54767392(c.-1709T>G), 54767466(c.-1783G>A), 54767467(c.-1784T>C), 54767728(c.-2045C>A), 54767862(c.-2179T>C), 54768184(c.-2501G>T), 54768398(c.-2715T>G), 54768561(c.-2878T>A), 54768735(c.-3052G>A), 54769296(c.-3613C>T), 54769614(c.-3931A>G), 54769707(c.-4024C>T), 54769764(c.-4081C>A), 54769778(c.-4095G>T), 54770169(c.-4486A>G), 54770206(c.-4523A>G), 54770264(c.-4581A>G), 54770265(c.-4582A>G), 54770462(c.-4779C>T), 54770631(c.-4948T>C), 54770681(c.-4998G>A), 54770722(c.-5039G>A), 54770726(c.-5043C>T), 5'UTR 54766419(c.-124A>C), 54766465(c.-170A>G), 54766515(c.-220C>T), CDS 3'UTR 54759204(c.305A>G), INTRON 54759580(c.370-39C>T), 54760297(c.280-340A>C), 54760749(c.280-792G>C), 54761016(c.280-1059T>A), 54761068(c.280-1111A>G), 54761098(c.280-1141C>T), 54761153(c.280-1196G>A), 54761445(c.279+1198T>C), 54761450(c.279+1193T>C), 54761916(c.279+727T>C), 54762023(c.279+620C>T), 54762025(c.279+618T>C), 54762047(c.279+596T>A), 54762323(c.279+320C>T), 54762338(c.279+305T>C), 54762390(c.279+253C>T), 54762835(c.161-74A>G), 54763311(c.122-351T>C), 54763591(c.122-631G>A), 54763823(c.122-863A>G), 54763884(c.122-924T>C), 54763998(c.122-1038T>C), 54764348(c.121+1215A>G), 54764400(c.121+1163T>C), 54764414(c.121+1149C>T), 54764475(c.121+1088A>G), 54764686(c.121+877C>T), 54764736(c.121+827T>C), 54764747(c.121+816A>G), 54766150(c.-10+155T>G), 54766229(c.-10+76C>T), -1kb 54754182(c.5327T>C), 54754489(c.5020A>G), 54754800(c.4709G>A), 54754912(c.4597C>T), 54755116(c.4393A>G), 54755149(c.4360T>C), 54755425(c.4084T>C), 54755839(c.3670T>C), 54755941(c.3568C>G), 54756042(c.3467T>A), 54756087(c.3422T>C), 54756528(c.2981A>G), 54756573(c.2936A>C), 54756972(c.2537T>C), 54757058(c.2451A>G), 54757181(c.2328T>G), 54757520(c.1989C>G), 54757616(c.1893G>A), 54757620(c.1889G>A), 54757787(c.1722C>T), 54758089(c.1420G>C), 54758389(c.1120G>A), 54758772(c.737C>G),
Insertions	+1kb 54767642 (c.-1960_-1959insTTTT), 54768509 (c.-2827_-2826insAG), 5'UTR CDS 3'UTR 54759097 (c.411_412insTCC), INTRON 54762887 (c.160+34dupG), -1kb 54757748 (c.1760_1761insAATTTTG),
Deletions	+1kb 5'UTR CDS 3'UTR INTRON 54762192 (c.279+449_279+450delGG), 54763838 (c.122-880_122-879delAG), -1kb 54754200 (c.5308delT), 54757075 (c.2431_2433delTTC), 54757201 (c.2307delT),
coding sequence substitutions
premature termination by the nucleotide substitution	0
synonymous num	0
non-synonymous num	0
synonymous substitutions
non-synonymous substitutions
B6 transcript (ENSMUST00000036825)	MDVFMKGLSMAKEGVVAAAEKTKQGVTEAAEKTKEGVLYVGSKTSGVVQGVASVAEKTKE QASHLGGAVFSGAGNIAAATGLVKKEEFPTDLKPEEVAQEAAEEPLIEPLMEPEGESYED SPQEEYQEYEPEA*
MSMv4 transcript	MDVFMKGLSMAKEGVVAAAEKTKQGVTEAAEKTKEGVLYVGSKTSGVVQGVASVAEKTKE QASHLGGAVFSGAGNIAAATGLVKKEEFPTDLKPEEVAQEAAEEPLIEPLMEPEGESYED SPQEEYQEYEPEA*
homology	100.00 (134 / 134)

Exon Detail Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Sncb (ENSMUSG00000034891)
Transcript ID	ENSMUST00000036825


..........CTCAAACGCCCAGACCAGCACTTCTGCCACCACTGCCCTCATCTGTGTTA
TATATCGTTAGCTTAAAACGCTCTTCTGATCTTGTTCCCGAGGGAAAACCTTACCCACCC
CACGAGCCCCAAACTAAGCACCACTTCCTTTTTACTTCTTTCCCTGACTCCCTGAGCTCA
CAGGGTCCCTTTCATCTGGGATGCCACACCTGCGTGGGTATAATTCTTTTATAGAACTGA
CTGATGTCCTACCGTGCATCTGGAATGCCCTCCCATAACCATAAACCATATGCTCTTGTC
TGGGTCTTGAGCAGGTTGCACTGCATCCTGACTGCCCGTCAGCATGGTGGTGCCTCCCAG
CCTTTGCCCTTGAGGGTCTGGTTCTGTGGATCGCACCCCCACCTGTCTAGGCCTACCTTG
TTGCTTCTCCCGGATCTCTCTATTCCAAGTCGTTTCTTGGAAGAGGCCTTTGCTGTCTAC
CTACTTTGCCTCAAGTCCATTTCTTACATCAGCATTTCTCTGTCTTCCTAACTACTCTCA
CAGGCTGAAGTAACCCTGTATGATTCAAGTGTGGATACATTGATTTTGTTTCCTGCCTCT
TGTCTCTGCACAGCCATGAGCGCGTCTTCCTGAGATACGAACCCTGCTTTTCTTTAGCAC
TGTTTCCACCCAACCTGCACCACCCATCCAAGCGGTGCCTAGAAGGGCATTGACTCCCTC
CATTGGTTCTACAGAAGAGGAACCTGGCGTTTCAAAAGGTGAGGTAGGTAGTTCAAGATC
CCGCAGCTACTAACAAACGCAGCTAGGATTGGAATCGCTCTGAACTTCCAAGCCAACCGC
ATAATTTCTACACCAGTCCTCTCTCGCCGCATTGCCACCTCCCACCATCCTCAAAGACTA
CTCTTCTCCAACACTAGGGTCCCCGGCTGCACGTCAGAGGCCCTCCCCTGGAGGCTCGCC
TGCTCTGGGGAGATGTCACCCTCCCCGCCCCCTGTCAGTCAGGCGGAGGG
GGCGGCGCGGCCACCAGGGGGGAGTGCTGAGCTCAGAGCTGCCGCAGCGCCGGAGCAGGAGCCGGAGCGGAGCCGGAGCGTGCGAGTAGCATCCTTGGTGGCAGAGCACCCAAGGCCAGAGCACTGCTGCGCTCCAGCTCAGGAAAGGTGACTCAAGAGCCTGACCACGGCAGGACCCCACTGGCCCCGAGTCCATCCATACCCAGCGTAGCCCAGCCCCGCGCATCTGCTCGCAGTAGCAGCCGCTGCCGCCACCACAGCTCCATCCCCCAGCCCGGCCCCGAAACCCAG
GTGAGGCTCCGGAAAGAGCACCGAA..........GCACTTGTGTGTTCGCCCTCCCCAG
GCCGCCAGGATGGACGTGTTCATGAAGGGCCTGTCCATGGCCAAGGAGGGCGTTGTGGCTGCAGCTGAGAAAACCAAGCAGGGGGTCACCGAGGCAGCAGAGAAGACCAAGGAAGGCGTCCTCTATGTCG
GTGGGCAAGGGGCTGCAGGGCTGGG..........ATATGTTCTTCTTTCTTCTCCATAG
GAAGCAAGACCAGTGGAGTGGTACAAGGTGTAGCCTCAG
GTACCAGACCAGTACTAATGCTTTA..........TTCCTCAAACTCCTCCCTGCTCCAG
TGGCTGAGAAAACCAAGGAGCAGGCATCGCATCTGGGAGGAGCTGTGTTCTCTGGGGCTGGGAACATTGCAGCAGCCACGGGCCTGGTGAAAAAGGAAGAGTTCCCCACAGACCTGAAG
GCAAGTGCCTACCCCCACCCCCATG..........CAGCCCTGCCTTTCTCTGTTCACAG
CCAGAGGAGGTGGCCCAAGAAGCCGCTGAGGAGCCCCTGATTGAGCCTCTGATGGAACCAGAAGGGGAAAGTTATGAGGACTCACCCCAG
GTGAGGGGGCTGCAGGGCTGGGGTA..........GTCTCCAACCCTTCCTTTGATGCAG
GAGGAATACCAGGAATACGAGCCAGAGGCGTAAGGGGTCCAGGAGGGCCTCGCACCAGCAGCACAATTCCTTCTGTCCCTGTCCCTGTCCCTGCCCCATCCCTCTCCCTCCCAACCCCCCACCCCCACCCCCCAGAGCCAGGGCTGTCCTTCTACCTTTTCCCCCAAACACGAGATCTTCCTTCGGCTCTGAGGCACTTCCTCAGGGCCTGTGTTAGTGTCTGCCCTGCCCTTCCGTCTGTCCTACTTGCCCGCGTTCATCCCTGAGGCGTGGACTGGAGTCGGGCAGAGAGGTCCGGCTGGGAGCCCCGCCCTACCAGTGTTGCCCCTCACCCTCCGTTTGGTCCAGTGTCTGCTCGGATGTAGCATGTTCTATGTATTTTTAAACCAAGATGGGAAAACTATGGCTCCTTCCCCATCCTAACAGAGGTTCTTCAATGGGCTCCCCCCCCCCCGCAGCCCCAATTCGACCCCTAAAATGTTTTGTTTTGTTTTGTTTTTTAACCCAAACCAGGAGCCAGGTCGTGCCATGCCCCCTCCCTCAGCCCGCTCGGTCCGAGCGCGGGCGTCGTTTGTTGTGATTGTGGCATGGAGAGTCCCCCCACCCACCGTGTGAGCGTGTCCCGGGGTGGGCGGCCAAGCCGCTCCCCAGTGTGTCCATGAATAAAGCCAATCTGTCTGTA
GCTGGCGCCGCCTAGGCAGGACTGGGCTTCTGGGCCCCAGACTGCCCCTTCGTTCCTTGA
ACTCTGACACACTAAACCCAGGTACAAGGCTAGCTACCTGGGATCTCAGCTTCTCCATCT
CCACACTGGCCCAGGACCCAGAGGGTGACAGCCCCCACCACCACCCACACTGAGATTGAA
GTTGACTGGGAGGTGGGAAGTTAGCATCAGGCGCCACCTCCTGGCAGGAAAGGGAGTGCA
GGACCAGAAGAAGAAACGACAGCACCGACATCACGAATACGCATGCACGCGCGAGAACCG
GCGCCAGTCTCTACGCGCGAGCTCGCATGTCAGCACCAAGGCCAGAGCGCACTTGCAGAC
CTGCGCACTTTGGCCCGCTTGCAGACGCGCCGCAGAAAAACGTCCTAAACCGTTGTCAGA
CCCCTCCCACTCCAGTCCTGTCCACACTCATTTACTCACACCCGCCCAACACAAACAAAA
CCGATGGCGGCAGGCCCAGGAGAGGGCAGAGCTCCCGGTAGGCGGTACTCTCCTCTCACT
GAAAGTTTGAGATTTCAGCTGGAGTAGGAGAGGGTCTGCAGAATACTAGGAAGCCCGCCA
GACACCGGGAGCACACCACGATCAGCACTAGGGGGCTCCCGCTGACTCAGAGTAAGATGG
GGAACCTCGATAAGATCCGCAATGCGTGGAGGCTCCGCCTCTGCAAGTAGGAAAACGCCT
TTATTGGCACAGGCTCCGCCCCAATCTGTGCAGCGTTTCCAATTGCAGTACAAACCCGGT
GGTCAGGTCTGCGTTCCCCGCGCAAGAGCCATATTCTGGTTTCCTGCAGAGAAGACCCCT
CAACATCGTCTTGAATCAGCTTACTCCATTCAGTAATCCTCTTTCCCGAGAGTCGTTGGC
GGAACAATGGCAAGTCTGGGAAAGCCATTAACAACCCTACAAGAGACCAATGTGTTCTGG
TCACCTGGGCTTTCACGTCTGGTAGCAGAAAGCAGCTAAC..........

No.	Exon / Intron	Start	End	Start Phase	End Phase	Length	Sequence
	5' upstream sequence						..........CTCAAACGCCCAGACCAGCACTTCTGCCACCACTGCCCTCATCTGTGTTA TATATCGTTAGCTTAAAACGCTCTTCTGATCTTGTTCCCGAGGGAAAACCTTACCCACCC CACGAGCCCCAAACTAAGCACCACTTCCTTTTTACTTCTTTCCCTGACTCCCTGAGCTCA CAGGGTCCCTTTCATCTGGGATGCCACACCTGCGTGGGTATAATTCTTTTATAGAACTGA CTGATGTCCTACCGTGCATCTGGAATGCCCTCCCATAACCATAAACCATATGCTCTTGTC TGGGTCTTGAGCAGGTTGCACTGCATCCTGACTGCCCGTCAGCATGGTGGTGCCTCCCAG CCTTTGCCCTTGAGGGTCTGGTTCTGTGGATCGCACCCCCACCTGTCTAGGCCTACCTTG TTGCTTCTCCCGGATCTCTCTATTCCAAGTCGTTTCTTGGAAGAGGCCTTTGCTGTCTAC CTACTTTGCCTCAAGTCCATTTCTTACATCAGCATTTCTCTGTCTTCCTAACTACTCTCA CAGGCTGAAGTAACCCTGTATGATTCAAGTGTGGATACATTGATTTTGTTTCCTGCCTCT TGTCTCTGCACAGCCATGAGCGCGTCTTCCTGAGATACGAACCCTGCTTTTCTTTAGCAC TGTTTCCACCCAACCTGCACCACCCATCCAAGCGGTGCCTAGAAGGGCATTGACTCCCTC CATTGGTTCTACAGAAGAGGAACCTGGCGTTTCAAAAGGTGAGGTAGGTAGTTCAAGATC CCGCAGCTACTAACAAACGCAGCTAGGATTGGAATCGCTCTGAACTTCCAAGCCAACCGC ATAATTTCTACACCAGTCCTCTCTCGCCGCATTGCCACCTCCCACCATCCTCAAAGACTA CTCTTCTCCAACACTAGGGTCCCCGGCTGCACGTCAGAGGCCCTCCCCTGGAGGCTCGCC TGCTCTGGGGAGATGTCACCCTCCCCGCCCCCTGTCAGTCAGGCGGAGGG
1	EXON 1	54,766,305	54,766,595	-	-	291	GGCGGCGCGGCCACCAGGGGGGAGTGCTGAGCTCAGAGCTGCCGCAGCGCCGGAGCAGGA GCCGGAGCGGAGCCGGAGCGTGCGAGTAGCATCCTTGGTGGCAGAGCACCCAAGGCCAGA GCACTGCTGCGCTCCAGCTCAGGAAAGGTGACTCAAGAGCCTGACCACGGCAGGACCCCA CTGGCCCCGAGTCCATCCATACCCAGCGTAGCCCAGCCCCGCGCATCTGCTCGCAGTAGC AGCCGCTGCCGCCACCACAGCTCCATCCCCCAGCCCGGCCCCGAAACCCAG
	INTRON 1 - 2	54,765,693	54,766,304			612	GTGAGGCTCCGGAAAGAGCACCGAA..........GCACTTGTGTGTTCGCCCTCCCCAG
2	EXON 2	54,765,563	54,765,692	-	1	130	GCCGCCAGGATGGACGTGTTCATGAAGGGCCTGTCCATGGCCAAGGAGGGCGTTGTGGCT GCAGCTGAGAAAACCAAGCAGGGGGTCACCGAGGCAGCAGAGAAGACCAAGGAAGGCGTC CTCTATGTCG
	INTRON 2 - 3	54,762,961	54,765,562			2,602	GTGGGCAAGGGGCTGCAGGGCTGGG..........ATATGTTCTTCTTTCTTCTCCATAG
3	EXON 3	54,762,922	54,762,960	1	1	39	GAAGCAAGACCAGTGGAGTGGTACAAGGTGTAGCCTCAG
	INTRON 3 - 4	54,762,762	54,762,921			160	GTACCAGACCAGTACTAATGCTTTA..........TTCCTCAAACTCCTCCCTGCTCCAG
4	EXON 4	54,762,643	54,762,761	1	0	119	TGGCTGAGAAAACCAAGGAGCAGGCATCGCATCTGGGAGGAGCTGTGTTCTCTGGGGCTG GGAACATTGCAGCAGCCACGGGCCTGGTGAAAAAGGAAGAGTTCCCCACAGACCTGAAG
	INTRON 4 - 5	54,759,958	54,762,642			2,685	GCAAGTGCCTACCCCCACCCCCATG..........CAGCCCTGCCTTTCTCTGTTCACAG
5	EXON 5	54,759,868	54,759,957	0	0	90	CCAGAGGAGGTGGCCCAAGAAGCCGCTGAGGAGCCCCTGATTGAGCCTCTGATGGAACCA GAAGGGGAAAGTTATGAGGACTCACCCCAG
	INTRON 5 - 6	54,759,542	54,759,867			326	GTGAGGGGGCTGCAGGGCTGGGGTA..........GTCTCCAACCCTTCCTTTGATGCAG
6	EXON 6	54,758,860	54,759,541	0	-	682	GAGGAATACCAGGAATACGAGCCAGAGGCGTAAGGGGTCCAGGAGGGCCTCGCACCAGCA GCACAATTCCTTCTGTCCCTGTCCCTGTCCCTGCCCCATCCCTCTCCCTCCCAACCCCCC ACCCCCACCCCCCAGAGCCAGGGCTGTCCTTCTACCTTTTCCCCCAAACACGAGATCTTC CTTCGGCTCTGAGGCACTTCCTCAGGGCCTGTGTTAGTGTCTGCCCTGCCCTTCCGTCTG TCCTACTTGCCCGCGTTCATCCCTGAGGCGTGGACTGGAGTCGGGCAGAGAGGTCCGGCT GGGAGCCCCGCCCTACCAGTGTTGCCCCTCACCCTCCGTTTGGTCCAGTGTCTGCTCGGA TGTAGCATGTTCTATGTATTTTTAAACCAAGATGGGAAAACTATGGCTCCTTCCCCATCC TAACAGAGGTTCTTCAATGGGCTCCCCCCCCCCCGCAGCCCCAATTCGACCCCTAAAATG TTTTGTTTTGTTTTGTTTTTTAACCCAAACCAGGAGCCAGGTCGTGCCATGCCCCCTCCC TCAGCCCGCTCGGTCCGAGCGCGGGCGTCGTTTGTTGTGATTGTGGCATGGAGAGTCCCC CCACCCACCGTGTGAGCGTGTCCCGGGGTGGGCGGCCAAGCCGCTCCCCAGTGTGTCCAT GAATAAAGCCAATCTGTCTGTA
	3' upstream sequence						GCTGGCGCCGCCTAGGCAGGACTGGGCTTCTGGGCCCCAGACTGCCCCTTCGTTCCTTGA ACTCTGACACACTAAACCCAGGTACAAGGCTAGCTACCTGGGATCTCAGCTTCTCCATCT CCACACTGGCCCAGGACCCAGAGGGTGACAGCCCCCACCACCACCCACACTGAGATTGAA GTTGACTGGGAGGTGGGAAGTTAGCATCAGGCGCCACCTCCTGGCAGGAAAGGGAGTGCA GGACCAGAAGAAGAAACGACAGCACCGACATCACGAATACGCATGCACGCGCGAGAACCG GCGCCAGTCTCTACGCGCGAGCTCGCATGTCAGCACCAAGGCCAGAGCGCACTTGCAGAC CTGCGCACTTTGGCCCGCTTGCAGACGCGCCGCAGAAAAACGTCCTAAACCGTTGTCAGA CCCCTCCCACTCCAGTCCTGTCCACACTCATTTACTCACACCCGCCCAACACAAACAAAA CCGATGGCGGCAGGCCCAGGAGAGGGCAGAGCTCCCGGTAGGCGGTACTCTCCTCTCACT GAAAGTTTGAGATTTCAGCTGGAGTAGGAGAGGGTCTGCAGAATACTAGGAAGCCCGCCA GACACCGGGAGCACACCACGATCAGCACTAGGGGGCTCCCGCTGACTCAGAGTAAGATGG GGAACCTCGATAAGATCCGCAATGCGTGGAGGCTCCGCCTCTGCAAGTAGGAAAACGCCT TTATTGGCACAGGCTCCGCCCCAATCTGTGCAGCGTTTCCAATTGCAGTACAAACCCGGT GGTCAGGTCTGCGTTCCCCGCGCAAGAGCCATATTCTGGTTTCCTGCAGAGAAGACCCCT CAACATCGTCTTGAATCAGCTTACTCCATTCAGTAATCCTCTTTCCCGAGAGTCGTTGGC GGAACAATGGCAAGTCTGGGAAAGCCATTAACAACCCTACAAGAGACCAATGTGTTCTGG TCACCTGGGCTTTCACGTCTGGTAGCAGAAAGCAGCTAAC..........

Sequence Detail Report

Gene Symbol (Gene ID)	Sncb (ENSMUSG00000034891)
Transcript ID	ENSMUST00000036825

		SNP Information
Strain :
Sequence Retrieve :
Exon translate : CDS Start ( 1 ) - End ( 134 ) -
Strand :	forward reverse
Show sequence :	nucleotide amino acid
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