|
|
5' upstream sequence
|
|
|
|
|
|
..........GGTGCTCACTGATCATTTTTTGAGAAAAAAAAAAATTCTAAAAACAATAA
AGGTGCAAAGTACAAGGTTGAGAAAAGACAGATCCGCAATAACTCCCACTAACAAACGTT
TACGTCCAATATGCCTACCTAAAAAACATCTTTTTCTGCCTAGGATTTTTTTTTTTCATT
TTTAACAGAGGGTCTATCTAGAACTCACTATGTAGTACAGGCTGACCTCTAGCTCGCCCT
GATCCTCCTGCCTCAGCTTCCTCGTACACAACAATGCTTGGGTTCTGCTTTAGTTTTATT
TTTGAATTTCATTAAACTGAAAAGCTAACTTCACTGAAGTCCACAAATCTCCAGGATGGC
TCAGTATTTTACACGTGGACATTGTTATCTGAAACACACCACTAAGCAAGGGGCTACTTA
ATACATCGGACTCAAAGCATTTCTAGTCTGATCATTTATTCCCAGTTTTTGCTGCGGTTA
TCGGAACCCCTTTTCGGGACTCAAGTAGCTGGGTCATCCATGCTTTTCGGGAGCCCCATT
CTGAAAAAACGCTGTAACAGGCTCACACAGTCTTAGCAGATGACCGCCTTTACTACCGGT
TGAGAACTTACTTACCTTGGCTGCAGCTAGCTGCTTACCTCTCAGACACTAGCCCGCCTT
TGTAAGCCGGGAGCTGTGCAAGGACTCACAGGCCCCGCCCCAGGGGCGAAGGCCCCGCCC
AATGTGGTCTGATCCCACCCCGGAAAAGATTATCCAGGCTCCGGTCCTATAGGCCCTGCC
CGGGGCGTGAGAACTCTGCCCAGGACACGCAGGCTCCGCCCAGCGTGCAGACCACGCCCA
GGGCGCGCAGGCCCCTCCCAGGACCCTGTGACCCCACCCAGGCCGCCCAGGCCCCACCTT
CAAACCTAAGCCCCGCCCCGAAGCAAGGACTCCGCCCAGAACGCGTAGGGCCCCGCCCTT
AGCAGCTGCCGAGATTGCGCAGTGGCGGAAATCATCGGGGCGGGGCGAGC
|
|
1
|
EXON 1
|
47,043,499
|
47,043,670
|
- |
- |
172
|
GCCGGGACCCTCCTGCTCCCTGGGCCTGTGCGCTCCTCCCACTCCGGGTCACGGCGTGAT AGGGGCGGAAGCGGCGGCGGCCGAGCTGCTGCAGCTGGCAGTGCGGATCAGGCCGTCCGG TGCAGCCCGGTGCAGCCCAGGGCAGCATTCGCCCCCTGGCCAGCGCTCTGAG
|
|
|
INTRON 1 - 2
|
47,043,671
|
47,047,902
|
|
|
4,232
|
GTAGGGACTCGAGCCTCACGCGGGC..........CCCCTCTCCTCCCCTCCTTCCCCAG |
|
2
|
EXON 2
|
47,047,903
|
47,048,002
|
- |
0 |
100
|
GTTTTCCAAAGCAATGGCCGCATCTCGAGGGAGGTCAAAGAAGAGAAGCAATTTGGAGCT TTCTCCTGATAACCTGCCTTTGAGGAGCTCTGGGCGGCAG
|
|
|
INTRON 2 - 3
|
47,048,003
|
47,049,177
|
|
|
1,175
|
GTATTCTCTGTTCACTCCTAGTTAC..........GTGACGTTAGTGGCTTCTTCCGTAG |
|
3
|
EXON 3
|
47,049,178
|
47,049,305
|
0 |
2 |
128
|
GCAAAGAAGAAAGCAGTAGAGATCCCGGATGAGGGTGAAGATGGTTCGTCGGAGAAGAAG TACCGGAAATGTGAAAAGGCAGGCTGTACGGCGGCGTACCCTGTGTGCTTTGCAAGCGCT TCTGAAAG
|
|
|
INTRON 3 - 4
|
47,049,306
|
47,050,609
|
|
|
1,304
|
GTCTGTGGCAGGGCTACCTTGGCCG..........CCAGCTCTGTTTCTGCTCTTTTCAG |
|
4
|
EXON 4
|
47,050,610
|
47,050,699
|
2 |
2 |
90
|
ATGTGCCAAAAATGGCTACACCTCCCGATGGTATCACCTTTCCTGTGGGGAACACTTCTG CAATGAATGCTTTGACCACTACTACAGAAG
|
|
|
INTRON 4 - 5
|
47,050,700
|
47,051,788
|
|
|
1,089
|
GTTTGTTTCTTGACTGGGAACTGGT..........TTTCTTTTTTTCTGATGGTTTTCAG |
|
5
|
EXON 5
|
47,051,789
|
47,051,900
|
2 |
0 |
112
|
CCACAAAGATGGGTATGACAAATACAGTGCATGGAAAAGAGTGTGGACCAGCAACGGCAA GACGGAGCCAAGCCCCAAGGCGTTCATGGCAGACCAGCAGCTGCCCTACTGG
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|
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INTRON 5 - 6
|
47,051,901
|
47,053,618
|
|
|
1,718
|
GTAAGGAGGCCCACTGCTGCCCCGA..........TGTCTTGCCTTTGCTTCTCATGTAG |
|
6
|
EXON 6
|
47,053,619
|
47,053,735
|
0 |
0 |
117
|
GTGCAGTGCACAAAACCCGAGTGTGGAAAGTGGAGGCAGCTAACCAAGGAGATCCAGCTT ACTCCACACATGGCGAGGACTTACCGCTGTGGCATGAAGCCAAATACTATTACCAAG
|
|
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INTRON 6 - 7
|
47,053,736
|
47,058,775
|
|
|
5,040
|
GTATGGTTTCTGTAGTGGCCTTTTG..........ATTCAGACTTGGTTTTCTCTTGTAG |
|
7
|
EXON 7
|
47,058,776
|
47,058,814
|
0 |
0 |
39
|
CCTGACACCCCCGATCATTGTTCTTTCCCCGAGGATCTG
|
|
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INTRON 7 - 8
|
47,058,815
|
47,060,752
|
|
|
1,938
|
GTGAGTACCTGTGTTCTGCATCAGA..........TTTTCCTCCCACTCATCCATCACAG |
|
8
|
EXON 8
|
47,060,753
|
47,060,981
|
0 |
1 |
229
|
AGAGTGCTGGAAGTTTCCAACCACTGGTGGTACCCCATGCTCATCCAGCCTCCGTTGCTG AAGGACAGTGTGGCAGCACCGCTGCTTTCTGCCTACTACCCCGACTGCGTTGGCATGAGC CCCTCCTGCACCAGCACACATCGTGCCACCGTCACAGCTGCTACCACAACCACCGGCAGT GCCAGCCCGGGGGAGATGGAGCCCTCCAAGGCAGCCCCCTCTTCACTTG
|
|
|
INTRON 8 - 9
|
47,060,982
|
47,062,957
|
|
|
1,976
|
GTGAGAGATGCTCTGGTACCCTTTT..........GAGCTGCTTGCCTGTGTGCCGTCAG |
|
9
|
EXON 9
|
47,062,958
|
47,063,142
|
1 |
0 |
185
|
TCCTAGGCATGAACCGGTACTTCCAGCCGTTCTACCAGCCCAACGAGTGTGGGAAAGCGC TGTGTGTGAGGCCAGACGTGATGGAGCTGGATGAGCTCTACGAGTTCCCAGAGTATTCGC GGGACCCCACCATGTACCTGGCTTTGAGAAACCTCATCCTCGCGCTGTGGTACACAAACT GCAAA
|
|
|
INTRON 9 - 10
|
47,063,143
|
47,064,053
|
|
|
911
|
GTAAGTAAGAACGTAGCAGCAGCAG..........GGTTTTGGTTTTGTTGTAAACACAG |
|
10
|
EXON 10
|
47,064,054
|
47,064,230
|
0 |
0 |
177
|
GAAGCTCTCACCCCTCAGAAGTGCATTCCCCACATCATTGTCCGGGGCCTTGTCCGCATC AGATGCGTTCAGGAAGTGGAGAGGATTCTTTACTTCATGACGAGGAAAGGCCTCATCAAC ACAGGCGTTCTCACGGTGGCAGCCGGCCAGCATCTTCTTCCTAAACACTACCACAAT
|
|
|
INTRON 10 - 11
|
47,064,231
|
47,064,570
|
|
|
340
|
GTAAGCGGCTGGATGTGCGGTAGGC..........ACTGGTGTTTTGTTTCTTTTTGAAG |
|
11
|
EXON 11
|
47,064,571
|
47,064,645
|
0 |
0 |
75
|
AAATCTGTTCTGGTTGTTGGGGCTGGTCCAGCAGGCTTAGCAGCTGCTAGGCAACTACAT AACTTTGGGATGAAG
|
|
|
INTRON 11 - 12
|
47,064,646
|
47,067,444
|
|
|
2,799
|
GTGAGACTCTGCCGGGGGGAGCGGT..........TACATTCCCCAATTACCTTTTTTAG |
|
12
|
EXON 12
|
47,067,445
|
47,067,582
|
0 |
0 |
138
|
GTGACTGTCCTGGAAGCCAAAGACCGGATTGGAGGCCGAGTATGGGATGACAAGTCCTTT AAAGGCGTGGTAGTAGGAAGAGGACCCCAGATTGTCAATGGCTGTATTAATAACCCAGTA GCACTAATGTGTGAGCAA
|
|
|
INTRON 12 - 13
|
47,067,583
|
47,068,463
|
|
|
881
|
GTGAGTGTCTTGAAAACTTGTAGAC..........CCCTGTTCTTCTTGTTATTTTGAAG |
|
13
|
EXON 13
|
47,068,464
|
47,068,635
|
0 |
1 |
172
|
CTTGGCATCAGCATGCGTAAGTTGGGAGAGAGATGTGACTTAATTCAGGAAGGTGGACGG ATAACTGACCCCACTGTTGACAAACGCATGGACTTTCATTTTAATGCTCTCTTGGATGTT GTCTCTGAGTGGAGGAAGGATAAGACTCTGCTCCAAGATGTCCCTTTAGGAG
|
|
|
INTRON 13 - 14
|
47,068,636
|
47,071,891
|
|
|
3,256
|
GTATGAGGAGTACGGTGGTGTGATG..........GTGCTCTGCTCTGTTCCCACCGCAG |
|
14
|
EXON 14
|
47,071,892
|
47,072,019
|
1 |
0 |
128
|
AGAAGATAGAGGAGATCTACCGAGCTTTTGTGAAGGAGTCTGGCATCCAGTTCAGCGAGC TGGAGGGACAGGTGCTGCAGTTCCACCTGAGTAACCTGGAGTATGCTTGTGGCAGCAGCC TGCACCAG
|
|
|
INTRON 14 - 15
|
47,072,020
|
47,073,710
|
|
|
1,691
|
GTGAGCCAGTGGGCCTGAAGTGGGC..........CCTAACACCTTGTGTTGTTTCCCAG |
|
15
|
EXON 15
|
47,073,711
|
47,073,842
|
0 |
0 |
132
|
GTGTCTGCTCGCTCCTGGGATCACAATGAATTCTTTGCCCAGTTTGCTGGTGACCATACC CTCCTCACACCAGGCTACTCCACTATCATTGAGAAACTGGCTGAAGGACTAGACATTCGA CTCAAATCTCCA
|
|
|
INTRON 15 - 16
|
47,073,843
|
47,074,353
|
|
|
511
|
GTGAGTATGGATGGGAAGGAGGCTC..........GTTTCAAAACGTTTTTCTCGGACAG |
|
16
|
EXON 16
|
47,074,354
|
47,074,428
|
0 |
0 |
75
|
GTGCAAAGTATAGATTATACTGGAGATGAAGTGCAGGTTACCACGACAGATGGTATGGGG CATTCTGCACAAAAG
|
|
|
INTRON 16 - 17
|
47,074,429
|
47,077,382
|
|
|
2,954
|
GTAGGTGCTGAGAACCTCCTGTGGT..........GTTACCTGTTCATTGTTTCCCACAG |
|
17
|
EXON 17
|
47,077,383
|
47,077,499
|
0 |
0 |
117
|
GTGTTAGTCACTGTGCCATTGGCCATACTACAGAGAGGTGCCATCCAGTTTAATCCACCA TTGTCAGAAAAGAAGATGAAAGCCATCAACAGCTTGGGTGCAGGCATCATTGAAAAG
|
|
|
INTRON 17 - 18
|
47,077,500
|
47,078,267
|
|
|
768
|
GTGACCTAAGTTTCCCCTTAGCCTC..........AGCCATTTCTCTGCTCACTTTCCAG |
|
18
|
EXON 18
|
47,078,268
|
47,078,393
|
0 |
0 |
126
|
ATTGCCTTGCAGTTTCCATATAGATTTTGGGACAGTAAAGTTCAAGGAGCTGACTTTTTT GGCCATGTTCCTCCCAGTGCCAGCCAACGAGGCCTCTTCGCTGTATTCTATGACATGGAC TCTCAG
|
|
|
INTRON 18 - 19
|
47,078,394
|
47,079,182
|
|
|
789
|
GTAAAATTCTGTGGTGTGGTTTGAG..........TTTCCCTGTGTGCTTGCAAAAGCAG |
|
19
|
EXON 19
|
47,079,183
|
47,079,299
|
0 |
0 |
117
|
CAGAGTGTGCTGATGTCGGTGATCACAGGGGAGGCAGTGGCGTCCCTCAGGACCATGGAT GACAAGCAGGTGCTACAGCAGTGCATGGGCATCCTTCGGGAGCTGTTCAAGGAGCAG
|
|
|
INTRON 19 - 20
|
47,079,300
|
47,080,435
|
|
|
1,136
|
GTGAGGCTGGAAGCCATCTGCATTG..........AATTTGTTGTTTGTTTGCACATAAG |
|
20
|
EXON 20
|
47,080,436
|
47,080,588
|
0 |
0 |
153
|
GAGATCCCAGAACCCACAAAGTATTTTGTCACACGGTGGAGCACAGAGCCATGGATCCAG ATGGCATATAGTTTCGTGAAGACCTTTGGAAGTGGCGAGGCCTATGATATTATTGCTGAA GAAATACAAGGAACGGTCTTTTTTGCTGGTGAG
|
|
|
INTRON 20 - 21
|
47,080,589
|
47,082,874
|
|
|
2,286
|
GTACATATCTTGACACCAAGCCCAA..........AGGATTCTTCTTTTCCTTCCCACAG |
|
21
|
EXON 21
|
47,082,875
|
47,084,600
|
0 |
- |
1,726
|
GCAACAAACAGGCATTTCCCACAAACTGTTACTGGGGCATATTTAAGTGGTGTACGAGAA GCAAGCAAGATTGCAGCCTTTTAAAAAGAACTTGTATGGACCTAACGTTCTGTATCCCAA ATGGAAGTTTGAAGCCAAGTTAAACTTCAGTTCTGCAAGAGAGGGGACTCTGTGACTCTA TAGTAAAATTGAAATGTTTCTGGTGATAGGAAAATGTAAACCCATTTCACTCTTCTGCAA CCACTGACCCTCAAAACCCTTCCAGGCACTTATCTTTTATTGCATTTTTCCATCTGTCCT GTGGGTTTCAGAAGGTGGCACCGTAGATCATGGAGGCCTTGGTTCTGGATGGGATGCCCC TCAGATTGGACATTCTGGTTGGCAGATTACTTTTCATATAATGTGAAACCAGGTAATCCA GCAGGCGTCACTAGCAAACTTGAGAAAGCCGTGTGCTTTTCTGTGACAATTTATCAGTAC CTTTACCAATGAGCCTTAATATTTTTACACAGTTCCAATTTTGGGCTTTCCTTAAAATTT ACAATTCTTTTTTGATACGGATTTTGACGTGATGCTTCTAGGCTATTTTATACTACCTAA ATTTCTTTTCATTTTCAAAACTTAGATTCGGGCATATTTTGATATTTTAGACCTGTACAA CACTCATCAGCAACACAAGACTCAACCTCTTAACAGTGAATACATATGTGTGCAAACATC TCAATGGATACAGGATGTTTTCAAACTACAAAACCATTTTTGAGTGGGCAGCACACTTGA AATTTAGCAAAAATCTTGTTAAACTTGAAAGCCCCTCTTTATTTTTAAAGTTGAATTTTA CAGTGTCTAATATTTTACATAGTTGTGAGTTTCCCATAGGCAGGTCCACTGGAAAACTGC ACGAAGTCTCAATCATCTTAGTACATACACAGGATATTACTTTATAAGCCATATGTTAAA AGTCTGAACGTGGCAAAACTTACTCTTCCACTGAAAAGACTGTTTAATAAGCATGGGTTT TCAGGGTCTTTGGGATGCCTATTCTGCCAAGAAACTTCAGTTGATAGACTAGAAATATAC TTTTGTTTTAAAAAGTCTTTAAACAATTCTTCTTTGAATTATATTGGTCTGCTTTTAAAA GGGAGCTACAAAGGACTTTACAGACACTTTTTGAAATATTAGGTATTTCTGAAATTCAAA TTTAGCTTAAGAAAAGATCTTATACAAAGAATGTACAGTGAAGTGTACTTTAGACAGTCT AGATACACTCTTCTCCCCTGTCAAAGTACAATATAAAGCCAATGGCAACATATTTAAAAG TTCATTATTCACTGTACTTAGAGGTTATTTGTTGAGACTCATTGGTACTGATAAGGGAAG TATTCTGCTTTCAAGTGTAAGTAATTAAAATGTTTAGCATGTGTGAAACGGTAAGTGCAC AATGTTAAATGGCCCTTCTAAGTCAGTTAGTTTCTAGGCACTTGAGCTTTGTGTGCTATT TCAAGTATAAGTGAGTAATTTTCTCCCACTGAGTGACATACTTAGTTTCATATTTGTTCT AAAGGAACTATGGTACTTTGAGTTATGTTCTCCAATCTCTGAGACTTTTGTTAATGAGCA CAAGTATACTTTGATTTAATAACTACATATCATGAATAATTGGTTATGTAAAACTGCTTA ATAAGTAGACTTTTGCAAATACCCGTAATAAATGGTCATAGCATCA
|
|
|
3' upstream sequence
|
|
|
|
|
|
CTGTGTCAACCTCCTTTCCAGTCCTTTAAGCTTCTTGGTCATAAGCATTTGCTACCCTAT
TTCCTTAATAGTAAGTGGTCAGCATACAAAACTAATTCTGTGTCAAAATGGTCATTTATT
GTCATAGGATAGAGTAGGAGAGAAATAACACTTAAGCAGACAAAGATTAAATACAAGACA
CTTAAAACATTGATTTATTCTTTATTGTGAAGATTTATGACAAATTGCTTAAAGGCCAAT
ATTTTTAGTCCCCACTTAATTGCTTGTTCCTCACTTTAAGCATATTGAAGTCAAGTATGT
GAAAATACCTGTTAATGCTCAAATCTGATCTGTGATGGGAAGATTAAACACTCAGCTGGT
ACATCTAGTGTCACTTTATCAGGCAGCATATTATAAATCAGAAATAGGTTTTTAGGACAG
TCAAAATTTAAGGGGCAGTCCATGTTTCATCACTTTAAAAATCAAACAGCCTTGATTCTG
TAATACTTCAATATTAATGTATGGTTTTTGATAAATACTTTCAGAGATACCTATGTTGTC
CACACCAACTCTGGTTACACTTGATGCTTTTAATCATAATTATGAAGGTAACCAGGTTTC
CTGTATCTAATATATTTATATGGTCAACAGTTTACTACTGTCAGTTCACTTATATATAAA
TCCATGTGTGCTCACGCCTTCCCAGTTTTTGAAGCTGTGATGTGTTTATCCTCATTATAA
AATTTCTATGACACTTAAAGTTAACACAACCACATTGATGACACTTTGAGGGCAAAGCAG
AACTAGACAGTCCTCAGTGCCATCACCACTGAACTCTGCGCTGTCACTGCTGCCTGGATG
AACACTGACATTTAGTTACAAGTTTAAAGACACAAGAGTTTAAAAAATTGATTTGCACAA
AAGAAATAAAAAAATTATATACAACAAATTGGTTTTTAAAAATACAAAAATAACATCTGT
CACTTCTGTCATGCCAACAACTTGACATATATACACATGC..........
|