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Target CDS Information

Gene Symbol (Gene ID) Igsf3 (ENSMUSG00000042035)
Cross Reference
CCDS CCDS17682.1
EMBL AK052454, AK129151, BC052892
Fantom D430026G15
GO GO:0003674, GO:0009986, GO:0009986, ...show all
goslim_goa GO:0003674, GO:0005575, GO:0005623, ...show all
MGI_trans_name Igsf3-001
OTTP OTTMUSP00000070200
OTTT OTTMUST00000131171
protein_id AAH52892.1, BAC35000.1, BAC97961.1
RefSeq_mRNA NM_207205.2
RefSeq_peptide NP_997088
UCSC uc008qrg.2
UniParc UPI00001C2D24
Uniprot/SWISSPROT Q6ZQA6
Vega_transcript Igsf3-001, OTTMUST00000131171
Vega_translation 188309, OTTMUSP00000070200
Definition protein_id:ENSMUSP00000048900
translation:
MKCFFPVLSCLAVLGVVSAQRQVTVQEGPLYRTESSHITIWCNVSGYQGPSEQNFQWSIY
LPSAPEREVQIVSTVDSSFPYAIYTQRVRGGKIYVERIQGNSALLHITDLQARDAGEYEC
HTPNTDERYFGSYSAKMNLVVIPDSLQTTAVPQTLHKVEQDPLELSCEVATETVQHTHLS
VSWLRQKGGENPVEVISLSRDFILHSSSEYAQRQSLGEVRLDKLGRSTFRLTIFHLQPSD
QGEFYCEAAEWIQDPDGSWYAMTRKRSEGAVVNVQPTDKEFTVRLETDKRLHTVGEPVEF
RCILEAQNIPDRYFAVSWAFNSSLIATMGPNAVPVLNSDFAHREAKGQLKVAKESDGVFV
LKIYHLRQEDSGKYNCRVTEREKTVTGEFIDKESKRPKNIPIVVLPLKSSISVEVASNAS
VVLEGEDLHFSCTVRTVGRLQARFSVIWQLVDRQNRRSNVMWLDRDGTLQPGSAYWERSS
YGGIQMEQVQPNSFSLGIFNSRKEDEGQYECHVTEWVRAVDGEWQIVGERRASTLVSITA
LETGFAVTAISRTPGVTYSDSFDLQCIIKPHYPARVPVSVTWRFQPVGTVEFHDLVTFTR
DGGVQWGDKSSTFRTRTAIEKAESSNNVRLSISRASDTEAGKYQCVAELWRRNYNNTWTR
LAERTSNLLEIRVLQPVTKLQVSKSKRTLTLVENRAIQLNCSVKSQTSPNSHFAVLWYVH
KPSDADGKLILKTTHSSAFEYGTYAEEEGLRGRLQFERHVSGGLFSLTVQRAEVSDSGSY
YCHVEEWLLSPNYAWYKLAEEVSGRTEVTVKQPDSRLKLSQVQGSLSVLETRQIQLECVV
LNRTSVASQLLVEWFVWKPNHPEREVVAHLSRDATFHYGEQAAKNNLKGRLHAESPSSGV
YRLFIQNVAVQDSGTYSCRVEEWLPSPSGVWYKRAEDTAGQTAVTVMRPDAALQVDTVVP
NATVTEKAAFQLDCSILSRSSQDSRFAVAWYSLRTKGGGKRGSLGIDEQEEEEEEEDISQ
EEDSEDPTERTVLLSVGPDAVFGPEGSPWEGRLRFQRLSPLLYRLTVLEASPQDTGNYSC
HVEEWLPSPQKEWYRLTEEESAPIGIRVLDTSSTLQSLICSNDALFYFVFFYPFPIFGIL
IITILLVRFKSRNSSKNSEGKNGVPLLWIKEPHLNYSPTCLEPPVLSIHPGAID

Chromosome 3
Length
Position(start - end)
81,586
101,378,450 - 101,460,037
Orient to Chromosome plus
Link Location : (3:101378450-101460037)
/

Detail Map


 

Report

Polymorphisms Report

Target Strain  MSMv4  JF1v3  KJRv1  SWNv1  CHDv1  NJLv1  BLG2v1  HMIv1  BFMv1  PGN2v1
Gene Symbol (Gene ID) Igsf3 (ENSMUSG00000042035)
Transcript ID ENSMUST00000043983
Reports
substitution
cSNPs16
Insertion51
Deletion67
SNPs
-1kb
5'UTR
CDS
3'UTR
INTRON
+1kb
Insertions
-1kb
5'UTR
CDS
3'UTR
INTRON
+1kb
Deletions
-1kb
5'UTR
CDS
3'UTR
INTRON
+1kb
coding sequence substitutions
premature termination by the nucleotide substitution0
synonymous num15
non-synonymous num1
synonymous substitutions 101425455 (p.Val16Val), 101425515 (p.Ser36Ser), 101425602 (p.Pro65Pro), 101425689 (p.Tyr94Tyr), 101425752 (p.Ala115Ala), 101425791 (p.Arg128Arg), 101427295 (p.Phe229Phe), 101431586 (p.Leu405Leu), 101439388 (p.Ala546Ala), 101439721 (p.Thr657Thr), 101450918 (p.Thr688Thr), 101455208 (p.Ser848Ser), 101458059 (p.Arg1095Arg), 101459968 (p.Pro1172Pro), 101460031 (p.Ile1193Ile),
non-synonymous substitutions 101457916 (p.Pro1048Ser),
B6 transcript
(ENSMUST00000043983)
MKCFFPVLSCLAVLGVVSAQRQVTVQEGPLYRTESSHITIWCNVSGYQGPSEQNFQWSIY
LPSAPEREVQIVSTVDSSFPYAIYTQRVRGGKIYVERIQGNSALLHITDLQARDAGEYEC
HTPNTDERYFGSYSAKMNLVVIPDSLQTTAVPQTLHKVEQDPLELSCEVATETVQHTHLS
VSWLRQKGGENPVEVISLSRDFILHSSSEYAQRQSLGEVRLDKLGRSTFRLTIFHLQPSD
QGEFYCEAAEWIQDPDGSWYAMTRKRSEGAVVNVQPTDKEFTVRLETDKRLHTVGEPVEF
RCILEAQNIPDRYFAVSWAFNSSLIATMGPNAVPVLNSDFAHREAKGQLKVAKESDGVFV
LKIYHLRQEDSGKYNCRVTEREKTVTGEFIDKESKRPKNIPIVVLPLKSSISVEVASNAS
VVLEGEDLHFSCTVRTVGRLQARFSVIWQLVDRQNRRSNVMWLDRDGTLQPGSAYWERSS
YGGIQMEQVQPNSFSLGIFNSRKEDEGQYECHVTEWVRAVDGEWQIVGERRASTLVSITA
LETGFAVTAISRTPGVTYSDSFDLQCIIKPHYPARVPVSVTWRFQPVGTVEFHDLVTFTR
DGGVQWGDKSSTFRTRTAIEKAESSNNVRLSISRASDTEAGKYQCVAELWRRNYNNTWTR
LAERTSNLLEIRVLQPVTKLQVSKSKRTLTLVENRAIQLNCSVKSQTSPNSHFAVLWYVH
KPSDADGKLILKTTHSSAFEYGTYAEEEGLRGRLQFERHVSGGLFSLTVQRAEVSDSGSY
YCHVEEWLLSPNYAWYKLAEEVSGRTEVTVKQPDSRLKLSQVQGSLSVLETRQIQLECVV
LNRTSVASQLLVEWFVWKPNHPEREVVAHLSRDATFHYGEQAAKNNLKGRLHAESPSSGV
YRLFIQNVAVQDSGTYSCRVEEWLPSPSGVWYKRAEDTAGQTAVTVMRPDAALQVDTVVP
NATVTEKAAFQLDCSILSRSSQDSRFAVAWYSLRTKGGGKRGSLGIDEQEEEEEEEDISQ
EEDSEDPTERTVLLSVGPDAVFGPEGSPWEGRLRFQRLSPLLYRLTVLEASPQDTGNYSC
HVEEWLPSPQKEWYRLTEEESAPIGIRVLDTSSTLQSLICSNDALFYFVFFYPFPIFGIL
IITILLVRFKSRNSSKNSEGKNGVPLLWIKEPHLNYSPTCLEPPVLSIHPGAID*
MSMv4 transcript
MKCFFPVLSCLAVLGVVSAQRQVTVQEGPLYRTESSHITIWCNVSGYQGPSEQNFQWSIY
LPSAPEREVQIVSTVDSSFPYAIYTQRVRGGKIYVERIQGNSALLHITDLQARDAGEYEC
HTPNTDERYFGSYSAKMNLVVIPDSLQTTAVPQTLHKVEQDPLELSCEVATETVQHTHLS
VSWLRQKGGENPVEVISLSRDFILHSSSEYAQRQSLGEVRLDKLGRSTFRLTIFHLQPSD
QGEFYCEAAEWIQDPDGSWYAMTRKRSEGAVVNVQPTDKEFTVRLETDKRLHTVGEPVEF
RCILEAQNIPDRYFAVSWAFNSSLIATMGPNAVPVLNSDFAHREAKGQLKVAKESDGVFV
LKIYHLRQEDSGKYNCRVTEREKTVTGEFIDKESKRPKNIPIVVLPLKSSISVEVASNAS
VVLEGEDLHFSCTVRTVGRLQARFSVIWQLVDRQNRRSNVMWLDRDGTLQPGSAYWERSS
YGGIQMEQVQPNSFSLGIFNSRKEDEGQYECHVTEWVRAVDGEWQIVGERRASTLVSITA
LETGFAVTAISRTPGVTYSDSFDLQCIIKPHYPARVPVSVTWRFQPVGTVEFHDLVTFTR
DGGVQWGDKSSTFRTRTAIEKAESSNNVRLSISRASDTEAGKYQCVAELWRRNYNNTWTR
LAERTSNLLEIRVLQPVTKLQVSKSKRTLTLVENRAIQLNCSVKSQTSPNSHFAVLWYVH
KPSDADGKLILKTTHSSAFEYGTYAEEEGLRGRLQFERHVSGGLFSLTVQRAEVSDSGSY
YCHVEEWLLSPNYAWYKLAEEVSGRTEVTVKQPDSRLKLSQVQGSLSVLETRQIQLECVV
LNRTSVASQLLVEWFVWKPNHPEREVVAHLSRDATFHYGEQAAKNNLKGRLHAESPSSGV
YRLFIQNVAVQDSGTYSCRVEEWLPSPSGVWYKRAEDTAGQTAVTVMRPDAALQVDTVVP
NATVTEKAAFQLDCSILSRSSQDSRFAVAWYSLRTKGGGKRGSLGIDEQEEEEEEEDISQ
EEDSEDPTERTVLLSVGPDAVFGPEGSSWEGRLRFQRLSPLLYRLTVLEASPQDTGNYSC
HVEEWLPSPQKEWYRLTEEESAPIGIRVLDTSSTLQSLICSNDALFYFVFFYPFPIFGIL
IITILLVRFKSRNSSKNSEGKNGVPLLWIKEPHLNYSPTCLEPPVLSIHPGAID*
homology99.92 (1195 / 1195)

Exon Detail Report

Target Strain  MSMv4  JF1v3  KJRv1  SWNv1  CHDv1  NJLv1  BLG2v1  HMIv1  BFMv1  PGN2v1
Gene Symbol (Gene ID) Igsf3 (ENSMUSG00000042035)
Transcript ID ENSMUST00000043983
No. Exon / Intron Start End Start Phase End Phase Length Sequence
5' upstream sequence
..........CTTTCTCCTGGGCGTAAGCTTAAAGCCCAGCCCTCCCCCCCCCTTCCGAT
TTTTTGTTATAACTCTTCCTGTCAGTCTTTCCTCCAGTCTAGTTAGGGTCCCACAGGGCT
TTTTCTCATAGGTACTGAGTCTTTCTTCTCTGGGCATATAAAGTTATGTTTCCAGGGCCT
ATCATTGTCCTCTGTACCCCTCCTCCCTTGTTCCGTGGTTTTATACTCCGTTTTCTCTAG
GACAAGGCTTCCTGGGCCTTACCCAGCCCAGCACTTCACCCCAGGAACACAGTGTTGGAA
TGGGTTCATTCCACACCATTTATGTATGGCCTACTGTTAGTGTTCCCAAGTAGATCACAA
GTCTGCAAGGGCAGTACGATCCAACCTGCTCCTGTAACGAGTCGTTTTTAGCTCCTTGTG
TTTGGTAATATTGAGTAAGTATGGTGCCACTTGCATAGATAGCACTGTTAAGAAACTAAT
GACAGTTCATTTGTAACTGAGTGCTTTTGACATATGAGGCATTCCGCTAAGTGCTTTACA
AGAATGACGTGGACACCTCACACAACCCTATTAAGCAGAGCTTATTTACTCTTTGTGACA
GATGAGCAGACTGAGGCACAGAGAGGTTAAGCAACACAGAAGCTAAGGCTATGAACCTAG
GCTGTCTCTGGGGTCCAGATTATGCTAGAGTGAAGCACAATGTGGAGGTTTGTTATAGAA
ATAGACTCAAGTCTCCAGCGAAGCGTTTTGCTATTGTTTACCGGGCGAAAGACGCGTCCC
CGGGAGCCTGGGCTTTGGGAGGGGCCCTTGGGGCGCGAACCCCAGGTTAACTTTCCATCA
GCTCATCCCAGGTGGTCCGCAGCTGCGTGCGGGTGCAGCCAGAGAGCGCCGGGGCGGTGG
GCGGGGCGTTCCGGGGGCGTGTCCCCGTGAGGCCACCGCCTTCGCCCTTGCTCGCCTCGC
GGGGAGCTGCGGGCCAGGCCGGAGCTGGAGGGCGGGGCCTGGGGCGGGGC
1 EXON 1 101,377,083 101,377,202 - - 120
GGGAGCAGGACGGCCTGAGCCGCTGCGGGAGGCGAGGAGGAAGCCGTGCGTCTTGGGAGG
CGTGCGGGACACAGGACCGGCGAGCGTTCGGTTGCTGGGAGCTGCGGGGCCCCGGGCGAG
INTRON 1 - 2 101,377,203 101,377,805 603
GTGAGCGCGGGCGGGCGGGCGCGGA..........TAAATGTCTGTTGTGTTTGTTTTAG
2 EXON 2 101,377,806 101,378,492 - 1 687
GAATCTGCGGGCTTTTGTGGGACCACTCTCGAGCTATCAAATGCCAGCTTACTTCGTGTG
CCCTGGGAGGTTCTGGGGCAGGTGACGGTACCGTGACCTCTCACTATGGATGGAGATGGA
CTTTTTGATGAAGAAATCCGAAGTGTCTTTACCAATCCGGGTGTTTTGGCTGTCTTGGGT
TTTGAAAAAACCTGCCTGGTTCCCTTTGGGGGATCCGAATGAGCGATCTCAGACACCTTC
ACTGCGAAGCCAAGGACATTTCTGTATAATCAGCGCATGAAAGGATTTTCTCAGACTCTT
TCCTCCCGTTTTCCTCGAGGATTAATCCACCAGAATCCATAGTTCCGGTGGAGTCTGCAA
GGCATATACAATGTGGCAGAAACCTTGAGCGCCTTCGGAATTGCTCTGGCCCCTGCCTTA
GGCATAGAGGACTCTATTGCACACGCCACGCCACTCCCCTCCCCTGCCCCCAACTCCCTC
CTTCTGACTACTCTGTCTTTGACTGGCTCTCATTTTCCCTGTGAAGTTCTGTTTCCAAAC
TGTTCCCTGGAGCTATAAGTGGATTGGCAGTAATGAGAGATTAGGCGGTGGGAAAAGCAC
GGTGCCCTGTGCAGTGTCCTTTTCCTGCTGCCGCTGCCGCCGACATGAAGTGCTTTTTCC
CAGTGTTGAGCTGTCTGGCTGTGCTGG
INTRON 2 - 3 101,378,493 101,425,450 46,958
GTAAGTGACTGCTTATCAGTTCTAT..........GGTTGCTGTGTCTGTCTCCCCTTAG
3 EXON 3 101,425,451 101,425,828 1 1 378
GTGTTGTGTCAGCGCAGCGACAGGTCACCGTCCAGGAAGGGCCCTTGTACCGCACAGAGA
GCTCTCACATCACCATCTGGTGCAACGTGAGTGGCTACCAGGGTCCCTCTGAGCAGAACT
TCCAGTGGTCCATTTACCTGCCCTCTGCTCCAGAGCGTGAAGTACAGATCGTTAGCACGG
TGGACTCTTCCTTCCCGTACGCCATCTACACCCAGCGAGTCCGCGGTGGGAAGATCTATG
TGGAGAGGATCCAGGGCAACTCAGCCTTACTTCACATCACAGACCTGCAAGCCCGGGATG
CTGGCGAGTATGAATGTCACACCCCCAACACCGATGAGCGATACTTTGGGAGTTACAGTG
CCAAGATGAACCTAGTGG
INTRON 3 - 4 101,425,829 101,427,029 1,201
GTAAGTGACTCTGCCTCCGCATGGC..........TCCATGGGAACATTCTATGTTACAG
4 EXON 4 101,427,030 101,427,440 1 1 411
TGATCCCAGATTCTCTGCAGACCACGGCTGTCCCCCAGACACTGCACAAAGTGGAACAGG
ATCCCCTGGAGCTCAGCTGCGAAGTGGCCACCGAGACCGTCCAGCACACCCACCTCTCGG
TATCCTGGCTGCGGCAGAAGGGTGGCGAGAACCCTGTGGAGGTCATTTCCCTGAGCCGAG
ACTTCATCCTGCACTCCAGCAGCGAATATGCCCAGAGGCAGAGCCTGGGCGAGGTGCGGC
TGGACAAGCTGGGGAGAAGCACCTTCCGTCTCACCATCTTCCACCTGCAGCCTTCCGACC
AGGGCGAGTTCTACTGCGAGGCTGCGGAGTGGATCCAGGATCCAGATGGCTCTTGGTACG
CCATGACCAGGAAGCGCTCCGAGGGTGCCGTGGTCAACGTCCAGCCCACTG
INTRON 4 - 5 101,427,441 101,431,203 3,763
GTCAGTGTCCCTCAGCTTTTTGTCC..........GCATCCAGTTTGTTTGTGTTCCCAG
5 EXON 5 101,431,204 101,431,593 1 1 390
ACAAAGAGTTCACCGTGCGTCTGGAAACAGATAAGAGGCTGCACACGGTGGGTGAGCCGG
TGGAGTTCAGATGTATCCTAGAGGCTCAGAACATTCCCGACCGGTACTTTGCCGTCTCCT
GGGCCTTCAACAGCTCACTCATTGCCACCATGGGGCCTAATGCCGTGCCAGTCCTCAACA
GCGATTTTGCCCACCGCGAAGCCAAGGGACAGCTTAAGGTGGCCAAAGAGAGTGATGGTG
TCTTTGTGCTGAAGATATACCACCTCCGCCAGGAAGACAGTGGCAAATACAACTGCCGGG
TGACTGAGCGAGAGAAGACTGTCACTGGCGAGTTCATAGACAAGGAGAGCAAGCGGCCCA
AGAACATCCCCATCGTCGTGCTCCCCCTCA
INTRON 5 - 6 101,431,594 101,435,330 3,737
GTAAGTAGAAGTGCGCCACTTACTC..........GTGTGGCCCTCTCTCTTCTCCCCAG
6 EXON 6 101,435,331 101,435,732 1 1 402
AAAGCAGCATCTCCGTGGAGGTGGCCAGCAATGCCAGTGTCGTCCTTGAGGGAGAGGACC
TGCACTTCTCCTGCACTGTCCGCACAGTGGGCAGGCTGCAGGCCCGCTTCTCGGTCATCT
GGCAGCTCGTGGATAGGCAGAACCGCCGCAGCAATGTCATGTGGCTAGACCGGGACGGCA
CCTTGCAGCCGGGCTCAGCGTACTGGGAGCGCAGCAGCTATGGAGGCATCCAGATGGAGC
AGGTGCAGCCCAACTCCTTCAGCCTGGGCATCTTCAACAGCAGGAAGGAAGATGAGGGCC
AGTATGAGTGCCACGTGACGGAGTGGGTTCGGGCCGTAGATGGAGAGTGGCAGATTGTGG
GAGAGCGCCGCGCCAGTACCCTGGTCTCTATCACAGCCCTTG
INTRON 6 - 7 101,435,733 101,439,374 3,642
GTGAGTGAGCAGTAGGACTGTGGCA..........GTTCATGTCTCTGCTCTCCCTACAG
7 EXON 7 101,439,375 101,439,779 1 1 405
AAACGGGCTTTGCGGTCACAGCTATCTCCCGGACACCAGGGGTCACCTACAGCGACTCCT
TTGACTTGCAGTGCATCATCAAACCCCACTACCCGGCCAGAGTCCCCGTGTCTGTGACAT
GGAGGTTCCAGCCAGTGGGCACAGTGGAGTTCCATGACCTGGTGACCTTCACACGAGATG
GAGGGGTTCAGTGGGGGGACAAGTCATCCACTTTCCGAACTCGGACTGCCATTGAGAAGG
CTGAGTCCAGCAACAATGTCCGCCTGAGCATCAGCCGGGCCAGTGACACAGAGGCAGGCA
AGTACCAGTGCGTGGCAGAGCTGTGGCGAAGGAATTACAACAATACGTGGACAAGGCTGG
CGGAGAGGACGTCCAACCTGCTGGAGATTCGGGTGCTGCAGCCAG
INTRON 7 - 8 101,439,780 101,450,883 11,104
GTGGGTGCTCAGCTCAGGCTCCAGG..........CTTATGTCACTCCTTCCCTTCACAG
8 EXON 8 101,450,884 101,451,294 1 1 411
TGACAAAGCTCCAGGTGAGCAAGTCGAAGAGAACCCTCACCCTGGTGGAAAACCGGGCAA
TTCAGCTGAACTGCTCAGTCAAGTCCCAGACCAGCCCGAACTCGCACTTCGCCGTGCTGT
GGTATGTTCACAAACCCTCGGACGCGGACGGCAAGCTCATCCTCAAAACCACGCACAGCT
CGGCCTTCGAGTACGGGACCTACGCCGAGGAGGAGGGCCTGCGAGGCCGGCTGCAGTTCG
AGAGGCATGTGTCGGGGGGCCTGTTCAGCCTCACTGTGCAGCGAGCCGAGGTCAGCGACA
GCGGTAGCTACTACTGCCACGTGGAGGAGTGGCTGCTGAGTCCCAACTATGCCTGGTACA
AGCTGGCCGAGGAGGTTTCAGGGCGCACAGAGGTCACTGTGAAGCAGCCAG
INTRON 8 - 9 101,451,295 101,455,104 3,810
GTGAGAATGGAAGGTGTGGCCGTCG..........AGTGTCTTTTTTCCTCCCTGTTCAG
9 EXON 9 101,455,105 101,455,512 1 1 408
ACAGCCGCCTGAAGCTCAGCCAAGTCCAGGGGAGCCTGTCTGTTCTGGAGACCCGGCAGA
TACAGCTGGAGTGTGTGGTCCTGAACCGCACCAGCGTGGCCTCCCAGCTCCTGGTGGAGT
GGTTTGTATGGAAGCCCAACCACCCAGAGCGAGAAGTGGTGGCCCACCTGAGCCGAGATG
CTACCTTCCACTATGGCGAACAGGCTGCCAAAAACAACCTGAAGGGGCGGCTGCACGCGG
AGAGCCCGTCCTCCGGCGTGTACAGGCTCTTCATCCAGAATGTGGCGGTACAGGACAGCG
GGACCTACAGCTGCCGAGTAGAGGAGTGGCTGCCCAGCCCCAGTGGTGTGTGGTATAAAA
GGGCTGAGGACACGGCCGGACAGACAGCCGTCACAGTCATGCGACCCG
INTRON 9 - 10 101,455,513 101,457,622 2,110
GTAAGGCCCTAGCCTTCGGTGTTTC..........TTCTCTGTTCCTTATCCCTCCCCAG
10 EXON 10 101,457,623 101,458,108 1 1 486
ACGCTGCCCTCCAGGTGGACACAGTGGTCCCCAATGCCACCGTAACTGAGAAGGCAGCTT
TCCAACTGGACTGCAGCATCCTGTCTCGATCGAGCCAGGACTCCCGCTTTGCTGTGGCCT
GGTATTCCCTAAGGACTAAAGGTGGAGGGAAAAGAGGCAGCCTTGGCATTGACGAGCAGG
AGGAAGAGGAGGAGGAGGAGGACATATCGCAAGAAGAAGACTCTGAAGATCCGACAGAGA
GGACAGTCCTGCTGAGCGTGGGACCTGATGCTGTCTTTGGTCCCGAAGGCAGTTCTTGGG
AGGGCAGGCTGCGCTTCCAGAGGCTCTCACCTCTGCTGTACCGGCTCACTGTGCTCGAGG
CGAGCCCCCAGGACACAGGCAACTACTCCTGCCATGTGGAGGAGTGGCTACCAAGCCCTC
AGAAGGAATGGTACCGGCTGACAGAGGAGGAGTCTGCCCCCATTGGCATCCGGGTTCTAG
ACACAA
INTRON 10 - 11 101,458,109 101,459,786 1,678
GTGAGTTTCCCCAGTTACAGAGGAG..........CTCATGGTTCCTTGCTGCCTTCCAG
11 EXON 11 101,459,787 101,463,059 1 - 3,273
GTTCAACCCTGCAGTCGCTCATCTGCTCCAACGATGCCCTCTTCTACTTTGTCTTCTTCT
ACCCTTTCCCCATCTTTGGCATCCTCATCATCACCATTCTGCTGGTGCGCTTCAAAAGCC
GGAACTCCAGCAAGAACTCAGAGGGGAAGAACGGGGTGCCCCTGTTGTGGATCAAGGAGC
CGCACCTGAACTACTCCCCGACTTGCCTGGAGCCTCCGGTGCTCAGCATCCACCCGGGAG
CCATAGACTAAAGAGGCTGCCCACCCCCAGCAGACGTTGCCCATGGCAGGGTCGGGTCAG
GGGAGCCCTCTGGGCTTTTCCTCATTGCTTCGTGCTCTGTGATTGGACAGGCGACAGCAC
CTGAACTCTGCAGTTTCTCTGCAGGAGCCAGTCAGACCTGGAACTTGTTGGAAGCTTCCG
GTCGAGGTGATGGTTGCCTCTGGGCGGCAGCCCTGGTTAGCTGATCACACCCAGGTGTCA
TGATGCCAACGTCCTAGGTTCCTAGTTTTTGGTTTTGGTAACTTAGTGCGTAGCTCCAGG
TGCCGCATCTACTCGCCAGTCTAACTCACGTTCTCAGATCGGTGCTATGGGGTTTCCTGT
GCTGTGTAATGTACTCTTTTAAGCCCCTTGGGTCCTCTCCTTTTGGATCCCATAATGTTG
TGGAAGAGTTTCTCTCACAACTGATAAGCAAGAGGAAGACGCCTTCATAGTAACAAGGAT
TCTCTTCCAAGACATTTTTGTTTTTGCACATTTGAAAATGCCACCCGTGGATCAAAATAT
ACCCAAACATTTTTTTCTTTTTTTTCTTTTTTTTTTTTTTTTTTTTTTTACTTTCTTAGC
AAGACTTGAAAAATATGTGTAGCGTGGGCCCAATTTGTATCTTATCTCTTCCCTCAGCCG
GAGTTGTTGGAACCACTTTATAGTCAAGATGAAAGCATTGAATTTCGCTTCAAAGGACTG
ACTGCACATGTGCAGAAGAAACCCTGCAGGACCCTATTAGGAGCAGATGGTGGCCAGCCA
ACCAGTCCGTCAGGGAGGCAAAAAGGCTCAGTCCCATCATTGCCAAAAAAGAAAAAAAAA
AAAATAATAATAAACGAGCCAACCTGAAGGAAGGGTCAAGGGCTCCAGGCGGCACCCAGT
TTCTGAGGGTTGCCCTGATGAAAGGCAATGACTGGGGATGAGGGGGGGACGGGTGGTTGT
TGGCTTGGCTTTGGCAAGCTTGGTCTCTTGACTTACCCCTGGGCAGGTAGCTTTCTTCTG
TAGGTGCTTTGCCAAATTTTCAAGGGGACATGTCTAGTGAAGCCTGAAGGGGCTGCCCTG
AGTGGAGGGAGCATTATGGCCAAAGTGGCCCCTGTGCACAGGCCCAGTGGAGTGTGCTGA
GCTGCTACACTGAGCTTAGCAGAGTGGAGCGTGGGAGGGCGTCTTAGAGCCTGGTTGAGA
GGTTGGAGGAGTGCTTCCCTCTGTCTTCCTTCCAGTGAGCCTTTCCTCGGAAACGGTGAG
GGCATCCTTATCCATCGCAGCTCTTCCCGAATCTCAGTGCCATGGAGATATTGTCCTCGG
ATAGGACCAGGCACAGCCCTTTGCCATTCTTGTTGTCCCCCTGCTTTCAGCAGACAACTC
AGAACAGGAGCTGTCACTTTCCTTTGTTAGAGTGTGTGTGTGTGTGTGTGTGCGTGCGCG
CGTGTATGTTTATGTTGTTTGGTTGTACTGGTGGCTTTTAATTTTCAGCCCCCAAATCCG
AACTCCACTGCCTCCACTCTGTTAAGCCAGATGCTTAGCTGCCCTGGAGCCTCATCAATT
GTAAATCCTCCCTTTTGTCACTCTGAGGATCTTGTGACCCCTCTCTTCCCCATCCTTCAG
TGGCCACATCTTCTCTGGGGAATTTGCATCCTGAGTCCCAAGAGAGAGCCCCTTGGAAAA
AGGTACCCAGGATTGTGGAAGTAAATTTAAGGAGTGATTTCTGCAAAGCCTCATCCTGAG
AATAAACAGACAACACAAAGGCTGCAGGACTTCCAGGTCATTGGGCCAGGCTGTTATGGA
TCCTTCCGAGGGGTCTGCTAGGTGTGGGCCGTGTGCTGAGCAGAGAGGGCAGGAGGCAAG
ATGCAGCCTGACAATCCTTCCTGGCCCTCTTGTTCTCTGAGAAGTGTCCAGGCAGCGCCA
CCTTAATCCTCCTGTGCCTGCCCTGCTGATTCTCATTTTTGCTGCACGAACACATCAGAG
GGACCAAATTGGCTCAGTCACGAAGAAAGAATGTCTTTTGTTCTGTTCCTTCGATTCATG
GGTGTGGGCTCTTGGTGGGTAGTTGCTGACTCCTGAGTTTTAGGCTGAGTCAATGAGGGA
AGATTGACGCCAGAGGGCTGGCCTGGATTAAGATTTCAGATCAGCTCTGTAGCAGCAGAA
GACTCAAGTAAATATGCAAAGCAACCGCAGGACGTTTGCAAGGAGCAAAGAAATCTATGT
CAGTATTTTAACAACCGTTTTTTGCGTGTATTTTCTGCAGGGCTGGGGTATGCAATCAAA
GTTTAAACTCTGAGCTTTCTATGAAAACAAAACAAAACAAAACAAAAACAAAAAAACAGA
AAAGAAAAAGAAAAATCCAAAACCCTCAGGACCTCTCTGTGGCTGGGTCTATGGACATGT
GTTGTCGGATAAATGGTGATGGCGCCCTCAAGTGGCTAGAAGGCTTCACTGCATATTGTC
TGTTGAGGCTTTTGTCCTCCGAGATCAGAGTACTCAAGAGAGACTCCTGACATCTGTCCT
CTCCAGTGTCACATTTATGAGCATCTCCACTGTGCTAGGCCTGTCCCAGGACACTATATG
ACCACACCCTCTCTCATCGTGGTGTTTCTGTAGCAAGTCTTCATATTTTTTTCCAACAAT
GGTGTCTCTGCGTTCATGTTGAAGACAGAAATGGGGTAAGAAGACTATCCGTGCATGAAG
TAGAGAACTGTTGGTTTGTTTCTTTTTTTTTTTTTAAAGGAGAAGCTATTTGTAAGCCAC
TGCACAAAGATGTTTTATATACACTGCAGAGACCTGTAGTAAATTATGTTGACAATACGC
TGTTTACATTTTCTGGAGTCTGATGGCCTCCTACCCCTCACTGAAGCAGCCACCTCCTGC
TGTGGGACTGTGCTCGGTGGGTGGCCTGGAGTTTTGCTCTTGGCACTGATGTACCAGATT
CAAGTTTTACACGCTGTAGCTTTTCTATGCATGCCCTCACCCAACCTAAATTATGTTTTT
TTGTATAAATGATAAAAAAAAACTTTCTCAAGA
3' upstream sequence
CACTTTTGCCACATGCTGAAATGTATCACAACTCTACACCTACCAGTTAAGAGTGCAGCC
CTGGAGCTGTGACACAGGTGCCCCCCGGGCCTGCTAGGCAGACTGGGAAGCTGGCTTTGC
TATGGGTTATGTGACTAGTTTTCCTTTGGTGGGAAATTTGGGGTAAGAAGACGCCAGTGA
GAATAGCCTTCCAGCTCACAGGGCCTCTGCTGCCGAGACCCAACTGCCCTTCCCAAGCCC
CGCTAATGCTCATGAATGGAAGTGGACAACAGGCATGAGAATAGGAGCTGGACAGTCCAG
GTGGTGAGACTTGGACACCAGTTACTACTGTGGGTGATTGACAGATGCCAACTGAGAAAC
ATTGGAATATTGCAAGCCCTAGAGGTGACCACACTTAGTTGGGTCTTTGAAGTTCATAGG
ACAAGCAGAGGAGGGGGGACAGAAGGCAGAAAGCAGAGGAGGTCCTCCCTCTTCCTTCCC
TCCCTTCCTTTCCCCTCCCTACCCCTCCCTCCCTTCCACCTCCCTTTTCCATCCCGCATC
CCCAAGGCTCAGCCCTATGCTGTCCTCTGCACCCAGCCCTATTTGCTGCGTTCTTCTTAT
CACCTACCTTCAGCTGCTTGCTTGCTTAGCCACAAGTTAAAACTGCAACTGCTTATCCCT
CAGGTGCCCACAAGGGTTCCATGTTAAATCTTAAATGTGTTATTTTTGCTTATGAGGTGA
AAACATGGCTGTTTATTTCTTGGGTACCCACAAAATGGTTCCCTGTTATGCATGATTCCC
TCCACCCAGAATGCCCTATTTCTACCAGGAGCTAAATTTTAAAAAGGGAAGTAGAGTATT
GTATAGTAAGATTACCCCTATTAAGCCCTTGGTTAAGTGAACATGTACCTGCCTGTGAGG
CGTATGATGAAAATGACCGTCTGTGTGTGGGGCCTTAAAGGGCTGTGTCTGTCACTATGT
CCCACATCCCTATACTTTATAGTTCCAAGTGTTTGGTAAA..........

Sequence Detail Report

Gene Symbol (Gene ID) Igsf3 (ENSMUSG00000042035)
Transcript ID ENSMUST00000043983
SNP Information
Strain :
Sequence Retrieve :
Exon translate :
CDS Start ( 1 ) - End ( 1195 )
-
Strand : forward reverse
Show sequence : nucleotide amino acid
Color information