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Target CDS Information

Gene Symbol (Gene ID) Uggt1 (ENSMUSG00000037470)
Cross Reference
CCDS CCDS48238.1
EMBL AC133102, BC062936, BC068283
GO GO:0003980, GO:0003980, GO:0005515, ...show all
goslim_goa GO:0003674, GO:0005575, GO:0005576, ...show all
MGI_trans_name Uggt1-001
OTTP OTTMUSP00000054599
OTTT OTTMUST00000097354
protein_id AAH62936.1, AAH68283.1
Reactome R-MMU-392499, R-MMU-446203, R-MMU-532668, ...show all
RefSeq_mRNA NM_198899.2
RefSeq_peptide NP_942602
RefSeq_peptide_predicted XP_006496125.1
UCSC uc007app.2
UniParc UPI0001A4718A
Uniprot/SWISSPROT Q6P5E4
Vega_transcript OTTMUST00000097354, Uggt1-001
Vega_translation 178940, OTTMUSP00000054599
Definition protein_id:ENSMUSP00000037930
translation:
MCSRGDANTADAAAARRVTGLRYNMRLLIALALPCLFSLAEANSKAITTSLTTKWFSAPL
LLEASEFLAEDSQEKFWSFVEATQNIGSSDHHDTDHSYYDAVLEAAFRFLSPLQQNLLKF
CLSLRSYSASIQAFQQIAVDEPPPEGCKSFLSVHGKQTCDLDTLESLLLTAADRPKPLLF
KGDHRYPSSNPESPVVILYSEIGHEEFSNIHHQLISKSNEGKINYVFRHYISNPSKEPVY
LSGYGVELAIKSTEYKAKDDTQVKGTEVNATVIGESDPIDEVQGFLFGKLRELYPALEGQ
LKEFRKHLVESTNEMAPLKVWQLQDLSFQTAARILAASGALSLVVMKDISQNFPTKARAI
TKTAVSAQLRAEVEENQKYFKGTIGLQPGDSALFINGLHIDLDTQDIFSLFDTLRNEARV
MEGLHRLGIEGLSLHNILKLNIQPSETDYAVDIRSPAISWVNNLEVDSRYNSWPSSLQEL
LRPTFPGVIRQIRKNLHNMVFIIDPVHETTAELISIAEMFLSNHIPLRIGFIFVVNDSED
VDGMQDAGVAVLRAYNYVAQEVDGYHAFQTLTQIYNKVRTGETVKVEHVVSVLEKKYPYV
EVNSILGIDSAYDQNRKEARGYYEQTGVGPLPVVLFNGMPFEKEQLDPDELETITMHKIL
ETTTFFQRAVYLGELSHDQDVVEYIMNQPNVVPRINSRILTAKREYLDLTASNNFYVDDF
ARFSALDSRGKTAAIANSMNYLTKKGMSSKEIYDDSFIRPVTFWIVGDFDSPSGRQLLYD
AIKHQKTSNNVRISMINNPSQEISDSSTPIFRAIWAALQTQASSSAKNFITKMAKEETAE
ALAAGVDIAEFSVGGMDVSLFKEVFESSRMDFILSHALYCRDVLKLKKGQRVVISNGRII
GPLEDNELFNQDDFHLLENIILKTSGQKIKSHIQQLRVEEDVASDLVMKVDALLSAQPKG
EARIEYQFFEDKHSAIKLKPKEGETYYDVVAVVDPVTREAQRLAPLLLVLTQLINMNLRV
FMNCQSKLSDMPLKSFYRYVLEPEISFTADSSFAKGPIAKFLDMPQSPLFTLNLNTPESW
MVESVRTPYDLDNIYLEEVDSIVAAEYELEYLLLEGHCYDITTGQPPRGLQFTLGTSANP
TIVDTIVMANLGYFQLKANPGAWILRLRKGRSDDIYRIYSHDGTDSPPDANDVVVILNNF
KSKIIKVKVQKKADMANEDLLSDGTNENESGFWDSFKWGFSGQKAEEVKQDKDDIINIFS
VASGHLYERFLRIMMLSVLKNTKTPVKFWFLKNYLSPTFKEFIPYMAKKYNFQYELVQYK
WPRWLHQQTEKQRIIWGYKILFLDVLFPLVVDKFLFVDADQIVRTDLKELRDFNLDGAPY
GYTPFCDSRREMDGYRFWKSGYWASHLAGRKYHISALYVVDLKKFRKIAAGDRLRGQYQG
LSQDPNSLSNLDQDLPNNMIHQVPIKSLPQEWLWCETWCDDASKKRAKTIDLCNNPMTKE
PKLEAAVRIVPEWQDYDQEIKQLQTLFQEEKELGTLHTEETQEGSQKHEEL

Chromosome 1
Length
Position(start - end)
99,900
36,144,226 - 36,244,127
Orient to Chromosome minus
Link Location : (1:36144226-36244127)
/

Detail Map


 

Report

Polymorphisms Report

Target Strain  MSMv4  JF1v3  KJRv1  SWNv1  CHDv1  NJLv1  BLG2v1  HMIv1  BFMv1  PGN2v1
Gene Symbol (Gene ID) Uggt1 (ENSMUSG00000037470)
Transcript ID ENSMUST00000046875
Reports
substitution
cSNPs21
Insertion98
Deletion110
SNPs
+1kb
5'UTR
CDS
3'UTR
INTRON
-1kb
Insertions
+1kb
5'UTR
CDS
3'UTR
INTRON
-1kb
Deletions
+1kb
5'UTR
CDS
3'UTR
INTRON
-1kb
coding sequence substitutions
premature termination by the nucleotide substitution0
synonymous num18
non-synonymous num3
synonymous substitutions 36146661 (p.Asp1480Asp), 36146688 (p.Glu1471Glu), 36155189 (p.Arg1323Arg), 36155190 (p.Pro1322Pro), 36162337 (p.Tyr1107Tyr), 36163401 (p.Arg1038Arg), 36174929 (p.Ala843Ala), 36175004 (p.Leu818Leu), 36184371 (p.Tyr612Tyr), 36184443 (p.His588His), 36185941 (p.Asp537Asp), 36192422 (p.Gly487Gly), 36195997 (p.Leu410Leu), 36208030 (p.Pro295Pro), 36210051 (p.Asn269Asn), 36216138 (p.Tyr230Tyr), 36227604 (p.His96His), 36234854 (p.Thr49Thr),
non-synonymous substitutions 36162358 (p.Asp1100Glu), 36174987 (p.Ser824Asn), 36174994 (p.Ala822Thr),
B6 transcript
(ENSMUST00000046875)
MCSRGDANTADAAAARRVTGLRYNMRLLIALALPCLFSLAEANSKAITTSLTTKWFSAPL
LLEASEFLAEDSQEKFWSFVEATQNIGSSDHHDTDHSYYDAVLEAAFRFLSPLQQNLLKF
CLSLRSYSASIQAFQQIAVDEPPPEGCKSFLSVHGKQTCDLDTLESLLLTAADRPKPLLF
KGDHRYPSSNPESPVVILYSEIGHEEFSNIHHQLISKSNEGKINYVFRHYISNPSKEPVY
LSGYGVELAIKSTEYKAKDDTQVKGTEVNATVIGESDPIDEVQGFLFGKLRELYPALEGQ
LKEFRKHLVESTNEMAPLKVWQLQDLSFQTAARILAASGALSLVVMKDISQNFPTKARAI
TKTAVSAQLRAEVEENQKYFKGTIGLQPGDSALFINGLHIDLDTQDIFSLFDTLRNEARV
MEGLHRLGIEGLSLHNILKLNIQPSETDYAVDIRSPAISWVNNLEVDSRYNSWPSSLQEL
LRPTFPGVIRQIRKNLHNMVFIIDPVHETTAELISIAEMFLSNHIPLRIGFIFVVNDSED
VDGMQDAGVAVLRAYNYVAQEVDGYHAFQTLTQIYNKVRTGETVKVEHVVSVLEKKYPYV
EVNSILGIDSAYDQNRKEARGYYEQTGVGPLPVVLFNGMPFEKEQLDPDELETITMHKIL
ETTTFFQRAVYLGELSHDQDVVEYIMNQPNVVPRINSRILTAKREYLDLTASNNFYVDDF
ARFSALDSRGKTAAIANSMNYLTKKGMSSKEIYDDSFIRPVTFWIVGDFDSPSGRQLLYD
AIKHQKTSNNVRISMINNPSQEISDSSTPIFRAIWAALQTQASSSAKNFITKMAKEETAE
ALAAGVDIAEFSVGGMDVSLFKEVFESSRMDFILSHALYCRDVLKLKKGQRVVISNGRII
GPLEDNELFNQDDFHLLENIILKTSGQKIKSHIQQLRVEEDVASDLVMKVDALLSAQPKG
EARIEYQFFEDKHSAIKLKPKEGETYYDVVAVVDPVTREAQRLAPLLLVLTQLINMNLRV
FMNCQSKLSDMPLKSFYRYVLEPEISFTADSSFAKGPIAKFLDMPQSPLFTLNLNTPESW
MVESVRTPYDLDNIYLEEVDSIVAAEYELEYLLLEGHCYDITTGQPPRGLQFTLGTSANP
TIVDTIVMANLGYFQLKANPGAWILRLRKGRSDDIYRIYSHDGTDSPPDANDVVVILNNF
KSKIIKVKVQKKADMANEDLLSDGTNENESGFWDSFKWGFSGQKAEEVKQDKDDIINIFS
VASGHLYERFLRIMMLSVLKNTKTPVKFWFLKNYLSPTFKEFIPYMAKKYNFQYELVQYK
WPRWLHQQTEKQRIIWGYKILFLDVLFPLVVDKFLFVDADQIVRTDLKELRDFNLDGAPY
GYTPFCDSRREMDGYRFWKSGYWASHLAGRKYHISALYVVDLKKFRKIAAGDRLRGQYQG
LSQDPNSLSNLDQDLPNNMIHQVPIKSLPQEWLWCETWCDDASKKRAKTIDLCNNPMTKE
PKLEAAVRIVPEWQDYDQEIKQLQTLFQEEKELGTLHTEETQEGSQKHEEL*
MSMv4 transcript
MCSRGDANTADAAAARRVTGLRYNMRLLIALALPCLFSLAEANSKAITTSLTTKWFSAPL
LLEASEFLAEDSQEKFWSFVEATQNIGSSDHHDTDHSYYDAVLEAAFRFLSPLQQNLLKF
CLSLRSYSASIQAFQQIAVDEPPPEGCKSFLSVHGKQTCDLDTLESLLLTAADRPKPLLF
KGDHRYPSSNPESPVVILYSEIGHEEFSNIHHQLISKSNEGKINYVFRHYISNPSKEPVY
LSGYGVELAIKSTEYKAKDDTQVKGTEVNATVIGESDPIDEVQGFLFGKLRELYPALEGQ
LKEFRKHLVESTNEMAPLKVWQLQDLSFQTAARILAASGALSLVVMKDISQNFPTKARAI
TKTAVSAQLRAEVEENQKYFKGTIGLQPGDSALFINGLHIDLDTQDIFSLFDTLRNEARV
MEGLHRLGIEGLSLHNILKLNIQPSETDYAVDIRSPAISWVNNLEVDSRYNSWPSSLQEL
LRPTFPGVIRQIRKNLHNMVFIIDPVHETTAELISIAEMFLSNHIPLRIGFIFVVNDSED
VDGMQDAGVAVLRAYNYVAQEVDGYHAFQTLTQIYNKVRTGETVKVEHVVSVLEKKYPYV
EVNSILGIDSAYDQNRKEARGYYEQTGVGPLPVVLFNGMPFEKEQLDPDELETITMHKIL
ETTTFFQRAVYLGELSHDQDVVEYIMNQPNVVPRINSRILTAKREYLDLTASNNFYVDDF
ARFSALDSRGKTAAIANSMNYLTKKGMSSKEIYDDSFIRPVTFWIVGDFDSPSGRQLLYD
AIKHQKTSNNVRISMINNPSQEISDSSTPIFRAIWAALQTQTSNSAKNFITKMAKEETAE
ALAAGVDIAEFSVGGMDVSLFKEVFESSRMDFILSHALYCRDVLKLKKGQRVVISNGRII
GPLEDNELFNQDDFHLLENIILKTSGQKIKSHIQQLRVEEDVASDLVMKVDALLSAQPKG
EARIEYQFFEDKHSAIKLKPKEGETYYDVVAVVDPVTREAQRLAPLLLVLTQLINMNLRV
FMNCQSKLSDMPLKSFYRYVLEPEISFTADSSFAKGPIAKFLDMPQSPLFTLNLNTPESW
MVESVRTPYDLDNIYLEEVESIVAAEYELEYLLLEGHCYDITTGQPPRGLQFTLGTSANP
TIVDTIVMANLGYFQLKANPGAWILRLRKGRSDDIYRIYSHDGTDSPPDANDVVVILNNF
KSKIIKVKVQKKADMANEDLLSDGTNENESGFWDSFKWGFSGQKAEEVKQDKDDIINIFS
VASGHLYERFLRIMMLSVLKNTKTPVKFWFLKNYLSPTFKEFIPYMAKKYNFQYELVQYK
WPRWLHQQTEKQRIIWGYKILFLDVLFPLVVDKFLFVDADQIVRTDLKELRDFNLDGAPY
GYTPFCDSRREMDGYRFWKSGYWASHLAGRKYHISALYVVDLKKFRKIAAGDRLRGQYQG
LSQDPNSLSNLDQDLPNNMIHQVPIKSLPQEWLWCETWCDDASKKRAKTIDLCNNPMTKE
PKLEAAVRIVPEWQDYDQEIKQLQTLFQEEKELGTLHTEETQEGSQKHEEL*
homology99.81 (1552 / 1552)

Exon Detail Report

Target Strain  MSMv4  JF1v3  KJRv1  SWNv1  CHDv1  NJLv1  BLG2v1  HMIv1  BFMv1  PGN2v1
Gene Symbol (Gene ID) Uggt1 (ENSMUSG00000037470)
Transcript ID ENSMUST00000046875
No. Exon / Intron Start End Start Phase End Phase Length Sequence
5' upstream sequence
..........TGTGTGTGTGTGTATGTATGAATATATGTGTGTGCCTGCACACAAGCTCA
ATTGACACTTCGTATTTTCCCCAGTCACTCGGTATTTATTGAGGTAGAATTCTTGAGCTC
AAGAATTCTGGCTAGTGTGGCTAGCCACTTTGCCAGAGGAATTGTCTCTGCCTCCTGAGA
ACTGGGATTACAGGTAGCTATTACTACAATTTCTACAAGGGTCCTGGAGATCTGAACTGT
AGTCTTCACATCTGGGCAGCAAATACTTTGTTTACTGAGTCATCTCCGCAGCCCGTGCCT
GGCGTTTGCGGTGTATTCTGGGAATTGAGCTTTGGTTTCCAGCTTAGCAGCAAGAACCTT
TGTCTTTTTTGCTTTCTTTTCCCCTGATGCTGCTTGGGTCTTGGAGGTGGTGATATAGGT
GTTTCAGTCAGAGCTGAGATCATTTAGTCTCAGTCAGTTTGACCAGTTATGGATCTCTGC
ATTAACCAACATCACATACTCTAAAACAAATTTATAACTTTTTCTTCCTTTTGAGATAGG
GCCTTGAACTCACAGAGATTCTTCTGCCTTTTTTTTTTTTTTTTTTTTTCTCGAGACAGG
GTTTCTCTGTATAGCCCTGGCTGCCCTCGAACTCACAAATCCGTTTGCCTCTGCCTCCCG
AGTGCTGGGATTAAAGGTGTGTGCCACCACGCCCAGCATGAGCTTCTTCTGCTTTTTGTG
TCTTGAGTTTGTGTACGTTTATTTAACTTGAGAGGAATAAATAATAAAAATAGAGAGAAA
ACGGTTGAAATAACTATCTGCCGGGGCGGTTGGACTGCGCCTTGAAGCTCACCTGCTTGA
ACTGGGTCTTCTAGGATCTTAAATTCAGGAGGCGAGCTGGCTCAACCAGGAGAGGGGAGG
GGCCGAGAGAAGGGGCGGGTCTTATGCCGGTTTCATGGCCGCTGCGGGACTCTCTGGCAA
ACCCCCGCCGCACTCGATAGCCGGAAGTCGTCCTGCCTTCGCCTCTAGGA
1 EXON 1 36,244,070 36,244,305 - 1 236
AGCGGAAGTGCAGGGGCAGCTGGCAACTGGGTTATTGCTTTGAGAAACCGGCTTGTGAGG
AGCGGCGGGAAAGGCGCGTGTCGGCTTCTCACTGGCGCAGCCTCCCCGGCGATCGCCGCT
GCTCCGCCCTGCCCAGGCGTCGTTGCAGACACCGGAGTGGACGAAGCGCGGCCCGGGCAT
GTGCAGCCGGGGGGATGCGAACACTGCGGATGCCGCGGCTGCGCGGCGGGTGACAG
INTRON 1 - 2 36,234,943 36,244,069 9,127
GTACCTCGGGTGGCGTGGGGAGGCC..........CCTTCTCTTCTTTTTCCCTGTGTAG
2 EXON 2 36,234,807 36,234,942 1 2 136
GGCTCCGTTACAACATGAGACTCCTGATTGCACTGGCCTTACCGTGCCTGTTTTCCTTAG
CAGAAGCCAATTCAAAAGCCATTACCACGTCTCTCACCACAAAGTGGTTTTCTGCCCCAC
TGCTGCTGGAAGCCAG
INTRON 2 - 3 36,230,741 36,234,806 4,066
GTAAGGAGGATTCTCTCCTCAGATG..........CTGACATGTCCCACTTTTCTTCCAG
3 EXON 3 36,230,658 36,230,740 2 1 83
TGAGTTCTTAGCAGAAGACAGTCAAGAGAAATTTTGGAGTTTTGTAGAAGCCACTCAAAA
CATTGGATCATCAGATCATCACG
INTRON 3 - 4 36,227,615 36,230,657 3,043
GTAAAATTGAAGCCAATACTTGTTT..........TCCGGTCGCTGTGCTTTTTCCACAG
4 EXON 4 36,227,484 36,227,614 1 0 131
ATACTGATCATTCCTATTACGATGCCGTATTGGAAGCTGCGTTTCGCTTCCTGTCCCCTC
TGCAGCAGAATTTGTTGAAGTTTTGTCTCTCTCTCCGTTCCTACTCAGCCTCAATTCAAG
CCTTCCAGCAG
INTRON 4 - 5 36,221,325 36,227,483 6,159
GTAAGAAGACCTCATGTGTCTAGGG..........GAATGTGTATTTGTCTTCCTGACAG
5 EXON 5 36,221,212 36,221,324 0 2 113
ATAGCAGTTGACGAGCCTCCACCAGAAGGGTGCAAGTCGTTTCTCTCAGTGCATGGAAAG
CAGACTTGTGATCTAGACACTCTGGAGAGCCTTCTGCTGACTGCCGCTGACAG
INTRON 5 - 6 36,216,307 36,221,211 4,905
GTCGGTTGTGTTCTTCACTCAATGT..........TTCTTAATTGAATATTTACTTCCAG
6 EXON 6 36,216,132 36,216,306 2 0 175
ACCGAAACCATTATTGTTCAAAGGAGATCACAGATATCCCTCATCAAATCCTGAGAGTCC
AGTGGTCATCCTTTATTCTGAGATTGGCCATGAAGAATTTTCTAATATTCACCACCAACT
TATATCAAAAAGCAACGAAGGCAAAATTAATTATGTATTCCGACATTACATATCT
INTRON 6 - 7 36,211,487 36,216,131 4,645
GTAAGTATTGACTTATTTTACAATT..........GGTGGAACTCTTGCTCTATTTGCAG
7 EXON 7 36,211,390 36,211,486 0 1 97
AATCCCAGCAAGGAGCCGGTTTACCTTTCTGGCTATGGAGTGGAACTGGCGATCAAGAGC
ACGGAGTACAAGGCCAAGGATGATACTCAGGTGAAAG
INTRON 7 - 8 36,210,065 36,211,389 1,325
GTGAATTTGTAAAAATAAGACCATG..........ACATGCCTCTACTATGTCTTTATAG
8 EXON 8 36,209,986 36,210,064 1 2 79
GAACTGAGGTAAACGCCACGGTCATCGGGGAGAGCGACCCTATTGATGAAGTGCAGGGAT
TCCTCTTTGGAAAATTAAG
INTRON 8 - 9 36,208,043 36,209,985 1,943
GTATGTTGATTCATGTTGCTGTGCA..........AGAAGAGTCGGTTCTGTTTCTGTAG
9 EXON 9 36,207,942 36,208,042 2 1 101
AGAACTGTACCCGGCCTTGGAAGGACAGCTGAAAGAGTTCCGGAAGCACCTTGTGGAGAG
CACCAACGAGATGGCCCCCCTGAAAGTCTGGCAGCTGCAAG
INTRON 9 - 10 36,202,879 36,207,941 5,063
GTAATGGGCGCTCAGCTCACTTGAG..........TAATGTCACATGTGCCGTTGTGCAG
10 EXON 10 36,202,779 36,202,878 1 2 100
ATCTCAGCTTCCAGACTGCTGCCCGAATCTTGGCTGCTTCTGGGGCATTATCTCTGGTGG
TGATGAAGGACATTAGTCAGAACTTTCCTACCAAGGCCAG
INTRON 10 - 11 36,201,766 36,202,778 1,013
GTATGTGCTAAGGTTTTGGTACATC..........TGATCACACTTTTATCCTTTTTTAG
11 EXON 11 36,201,705 36,201,765 2 0 61
AGCAATAACGAAAACGGCTGTGAGCGCGCAGCTTAGAGCGGAAGTGGAAGAGAACCAGAA
G
INTRON 11 - 12 36,197,636 36,201,704 4,069
GTATTGCTGACTGTTAGAAAGTACT..........TCCCTGCCTTTGTGTGTGCTTTCAG
12 EXON 12 36,197,544 36,197,635 0 2 92
TATTTCAAGGGAACTATAGGATTACAGCCTGGAGACTCAGCGCTCTTCATCAATGGACTT
CATATCGATTTAGACACCCAGGATATATTCAG
INTRON 12 - 13 36,196,001 36,197,543 1,543
GTATGGAAAATATTTCTATTCTCTC..........ACAAGTAACCTTGCTTTTCCTGCAG
13 EXON 13 36,195,850 36,196,000 2 0 151
TCTGTTTGATACATTGAGGAATGAAGCCCGTGTAATGGAGGGTCTGCACAGGCTGGGAAT
AGAAGGCCTTTCTCTACATAATATTTTGAAGCTGAACATCCAGCCCTCTGAGACTGACTA
CGCAGTAGACATCAGGAGTCCTGCTATTTCC
INTRON 13 - 14 36,192,506 36,195,849 3,344
GTGAGTATTCATTCTGAGTGGTCAT..........TTGTTTTTGTTTTTTATCATTCAAG
14 EXON 14 36,192,386 36,192,505 0 0 120
TGGGTCAACAACCTAGAGGTCGATAGCCGATATAACTCATGGCCTTCAAGCTTACAGGAG
TTACTCCGCCCCACGTTTCCTGGCGTCATACGGCAGATCAGAAAGAACCTGCATAACATG
INTRON 14 - 15 36,191,615 36,192,385 771
GTAAGTAGGGCGCTTGCTGCTGTCC..........GTTCTTTTTCCTTTTCCTCTGACAG
15 EXON 15 36,191,529 36,191,614 0 2 86
GTTTTCATTATCGATCCTGTACACGAGACCACAGCCGAGTTGATTAGCATCGCCGAGATG
TTCCTCAGCAATCACATACCGCTAAG
INTRON 15 - 16 36,185,969 36,191,528 5,560
GTAACACTGCGCTCATTAGCCGAGC..........CCCCTTTTTCTGCTCCCCTCTGCAG
16 EXON 16 36,185,833 36,185,968 2 0 136
GATTGGTTTTATCTTTGTGGTCAATGATTCTGAAGATGTTGATGGGATGCAAGATGCTGG
AGTCGCTGTTCTGAGAGCGTATAATTATGTGGCTCAGGAAGTGGATGGCTATCACGCCTT
CCAGACTCTCACACAG
INTRON 16 - 17 36,184,488 36,185,832 1,345
GTATGTTTTTACCCCAAATGGCAAA..........TGGTTCCCTGCTTTTCTTTCCTTAG
17 EXON 17 36,184,356 36,184,487 0 0 132
ATCTATAACAAGGTGAGGACTGGAGAGACAGTGAAAGTGGAGCATGTGGTCAGTGTCTTG
GAGAAGAAGTACCCGTACGTGGAAGTGAATAGCATTCTGGGAATTGATTCTGCTTATGAT
CAGAATCGGAAG
INTRON 17 - 18 36,182,635 36,184,355 1,721
GTAACACGTTCTTTGGAACTTCTTA..........CTTTTTCTTGTCCTTTGTTTTCTAG
18 EXON 18 36,182,470 36,182,634 0 0 165
GAAGCAAGAGGCTACTATGAGCAGACTGGAGTAGGCCCCCTGCCTGTTGTCCTGTTCAAT
GGAATGCCCTTTGAAAAGGAGCAGTTAGACCCGGATGAGCTGGAAACCATCACAATGCAC
AAGATCTTGGAGACAACCACCTTCTTCCAAAGAGCTGTGTACTTG
INTRON 18 - 19 36,179,680 36,182,469 2,790
GTGAGTGATATTCTCACACGAGCTT..........CTGCCCCTTTTCTTTTTTCATACAG
19 EXON 19 36,179,559 36,179,679 0 1 121
GGTGAGCTGTCCCATGATCAAGATGTGGTAGAGTACATCATGAATCAGCCAAATGTTGTT
CCAAGAATCAACTCTAGGATTCTGACAGCTAAGCGAGAGTATCTGGACCTAACAGCAAGC
A
INTRON 19 - 20 36,177,617 36,179,558 1,942
GTAAGGAACATTTCAGTAGCAACTC..........TCAGTTTTTCCTGTTTTTCCACCAG
20 EXON 20 36,177,518 36,177,616 1 1 99
ATAATTTTTATGTGGATGACTTTGCCAGATTTTCTGCCTTGGACTCTCGGGGCAAGACGG
CTGCTATTGCCAACAGTATGAACTATCTGACGAAAAAAG
INTRON 20 - 21 36,176,800 36,177,517 718
GTAACCCACTTGGGCTTGATTTGGT..........TTTTTTTTTTTTTGCCTTTGTCCAG
21 EXON 21 36,176,776 36,176,799 1 1 24
GAATGTCCTCCAAGGAAATCTATG
INTRON 21 - 22 36,176,328 36,176,775 448
GTAACTCACAACTCCAGAATGTTCC..........GTTTGTTGTCCTTGTTTCTCTACAG
22 EXON 22 36,176,233 36,176,327 1 0 95
ATGATTCTTTTATTAGACCAGTGACTTTTTGGATTGTTGGAGATTTTGATAGCCCTTCTG
GGCGGCAGCTACTATATGATGCCATTAAACATCAG
INTRON 22 - 23 36,175,103 36,176,232 1,130
GCAAGTGTCTCAGATTTCATTCTGG..........CTCTTATCTCCCCTGTTTTAAATAG
23 EXON 23 36,174,896 36,175,102 0 0 207
AAAACCAGTAACAATGTTAGGATAAGTATGATCAACAATCCCAGCCAAGAGATCAGTGAC
TCAAGCACCCCCATCTTCAGAGCCATCTGGGCAGCTCTCCAAACACAGACCTCCAACTCT
GCTAAGAACTTCATCACCAAGATGGCCAAAGAGGAGACGGCAGAGGCCCTGGCTGCAGGA
GTGGACATTGCGGAATTCTCTGTCGGG
INTRON 23 - 24 36,174,211 36,174,895 685
GTAAGGCTCGCAGGTTCCGAGGCTA..........TTCCTTAAAAATGATTACTTCCTAG
24 EXON 24 36,174,079 36,174,210 0 0 132
GGCATGGATGTCAGTCTTTTTAAAGAGGTCTTTGAGTCTTCCAGAATGGATTTCATTTTG
TCTCATGCCCTGTACTGCAGGGATGTTCTGAAGCTGAAGAAGGGACAGCGAGTGGTGATC
AGCAACGGAAGG
INTRON 24 - 25 36,173,566 36,174,078 513
GTGAGCACTTGCTGGGCTGTGAGCC..........TGCCCTCCCCCTCCTTACCTCACAG
25 EXON 25 36,173,435 36,173,565 0 2 131
ATCATTGGGCCTCTGGAGGACAATGAGCTCTTCAACCAAGATGATTTCCACCTCCTGGAA
AATATCATCCTGAAAACATCGGGACAGAAAATAAAGTCTCATATCCAACAGCTTCGAGTA
GAAGAAGACGT
INTRON 25 - 26 36,170,295 36,173,434 3,140
GTAAGTTTTATACCTAGTAACGAGT..........AAAATTTCATAACTTCATCTTTTAG
26 EXON 26 36,170,199 36,170,294 2 2 96
GGCCAGTGATTTGGTAATGAAGGTGGATGCTCTCCTGTCAGCACAACCCAAAGGAGAGGC
GAGGATCGAGTACCAGTTCTTTGAGGATAAACACAG
INTRON 26 - 27 36,165,612 36,170,198 4,587
GTACAGTTGTTGCTGCACTAACGCA..........TCTTTTGATTTTTTTTTTCTCTCAG
27 EXON 27 36,165,509 36,165,611 2 0 103
TGCAATTAAGCTGAAGCCCAAAGAAGGAGAGACATACTATGATGTGGTAGCCGTTGTTGA
CCCTGTCACACGAGAAGCACAGAGGCTCGCCCCCTTGCTCTTG
INTRON 27 - 28 36,164,524 36,165,508 985
GTAGGCCTGCTGTGGAGGTGTTCAC..........TTTGTCATCTGGTTTGCTTTTTTAG
28 EXON 28 36,164,444 36,164,523 0 2 80
GTTTTGACTCAGCTGATAAACATGAATCTAAGAGTATTTATGAATTGCCAATCCAAGCTT
TCCGACATGCCTTTAAAAAG
INTRON 28 - 29 36,163,411 36,164,443 1,033
GTAAAATGCCATTTAAGGAACACTG..........AACTAACACTTGCGTTTCTTTTCAG
29 EXON 29 36,163,221 36,163,410 2 0 190
CTTTTACCGCTACGTCTTAGAGCCGGAGATTTCTTTCACTGCAGACAGCAGCTTTGCTAA
GGGACCGATAGCAAAGTTTCTGGATATGCCACAGTCTCCGCTGTTTACTTTGAATCTGAA
CACACCTGAGAGTTGGATGGTAGAATCTGTCAGAACACCATATGATCTGGATAATATTTA
TCTAGAAGAG
INTRON 29 - 30 36,162,364 36,163,220 857
GTAGGGATGTAATTGTTCTCGACTA..........ATGTGCTTTAACTCTGGTCTTTCAG
30 EXON 30 36,162,205 36,162,363 0 0 159
GTGGAGAGTATAGTGGCTGCTGAGTACGAGCTGGAATATCTGTTACTAGAAGGTCATTGT
TACGACATCACCACAGGCCAGCCCCCTCGAGGACTACAGTTCACTTTAGGAACTTCAGCC
AACCCAACAATTGTGGACACAATTGTGATGGCCAATCTG
INTRON 30 - 31 36,161,762 36,162,204 443
GTAAGTAATCAGTTTATTGATAGTA..........AGCCTGTACTCTGTTTGTGTCCTAG
31 EXON 31 36,161,676 36,161,761 0 2 86
GGATATTTTCAGCTCAAAGCCAATCCGGGAGCCTGGATTCTGAGACTGAGGAAGGGGCGC
TCAGATGACATTTATAGGATCTACAG
INTRON 31 - 32 36,160,027 36,161,675 1,649
GTAGGACAAGGAGATGGCTTCATTG..........TTTCTCTGTCTTACTTGTCTCTAAG
32 EXON 32 36,159,942 36,160,026 2 0 85
CCATGATGGTACAGATTCCCCTCCTGATGCAAACGACGTTGTTGTCATCCTCAATAACTT
CAAGAGCAAGATCATCAAAGTGAAG
INTRON 32 - 33 36,158,197 36,159,941 1,745
GTGAGTCTGCTCGGCTTTGTCAGGG..........TCAGACCTGTCACATACAATTGCAG
33 EXON 33 36,158,108 36,158,196 0 2 89
GTTCAGAAGAAGGCAGACATGGCTAATGAAGACTTGCTGAGTGATGGGACAAATGAGAAC
GAGTCTGGATTCTGGGACTCATTCAAGTG
INTRON 33 - 34 36,157,502 36,158,107 606
GTAAGTCGGCATCATGGTGAACAGC..........GCTGTTTTTAATTATGTCATCACAG
34 EXON 34 36,157,400 36,157,501 2 2 102
GGGCTTCTCAGGACAGAAGGCTGAAGAAGTGAAGCAAGATAAAGATGACATAATCAATAT
TTTCTCTGTTGCATCTGGTCATCTCTACGAAAGATTTCTTCG
INTRON 34 - 35 36,156,312 36,157,399 1,088
GTTAGTTTTCACTATTTGTTATGTA..........AATAATTATTTGTTTTGTTTGGCAG
35 EXON 35 36,156,227 36,156,311 2 0 85
CATCATGATGCTCTCAGTCCTGAAGAATACCAAGACTCCTGTGAAGTTCTGGTTCTTGAA
GAACTACTTGTCCCCCACATTTAAG
INTRON 35 - 36 36,155,256 36,156,226 971
GTTTGTTCATAGGGAAAAGGAAAAC..........TTGTTGTTCCCTGTGTCTAAACTAG
36 EXON 36 36,155,073 36,155,255 0 0 183
GAGTTTATACCTTACATGGCCAAAAAATACAATTTCCAGTATGAGCTTGTTCAGTACAAA
TGGCCGCGGTGGCTTCACCAGCAGACGGAGAAGCAGCGAATCATCTGGGGCTACAAGATC
CTCTTCCTGGACGTGCTTTTCCCGCTGGTTGTTGACAAGTTCCTCTTTGTGGATGCTGAT
CAG
INTRON 36 - 37 36,151,795 36,155,072 3,278
GTGAGCTTGCTCGGGTGGGGGTAAC..........AAACCGTTTGTTTTCTTTACTGCAG
37 EXON 37 36,151,634 36,151,794 0 2 161
ATTGTACGGACAGATCTGAAGGAGTTAAGAGATTTCAATTTGGATGGTGCGCCTTACGGT
TACACTCCCTTCTGCGACAGCAGGAGAGAGATGGATGGCTACCGCTTCTGGAAGTCAGGG
TACTGGGCCAGTCATTTGGCTGGACGAAAGTATCACATCAG
INTRON 37 - 38 36,150,160 36,151,633 1,474
GTACTGAGAGGGTGCCCTGCTTATG..........TAACAAGTGTCTCCTCTCCACTCAG
38 EXON 38 36,150,045 36,150,159 2 0 115
TGCGCTGTATGTCGTGGATCTGAAGAAGTTTAGGAAAATAGCTGCTGGAGACAGACTCAG
GGGACAGTACCAAGGTCTGAGCCAGGATCCCAACAGTCTTTCAAATCTTGATCAA
INTRON 38 - 39 36,146,742 36,150,044 3,303
GTAAGTGACCGTTGACATTACACAT..........GTGTTTCATTTTCTTTACCAAACAG
39 EXON 39 36,146,625 36,146,741 0 0 117
GATTTGCCCAATAACATGATCCATCAGGTGCCAATCAAATCGCTCCCTCAGGAGTGGCTT
TGGTGTGAAACGTGGTGTGACGACGCCTCTAAGAAGCGGGCAAAGACCATCGACCTG
INTRON 39 - 40 36,146,186 36,146,624 439
GTGAGCTGCCCTCCCTGCCCTGGGA..........CTGAGGTGTGCTTGTGTGCTTGCAG
40 EXON 40 36,146,032 36,146,185 0 1 154
TGTAATAATCCCATGACTAAGGAGCCCAAACTGGAGGCTGCCGTGCGGATCGTCCCTGAG
TGGCAAGACTACGACCAGGAGATCAAGCAGCTGCAGACCCTCTTCCAAGAGGAGAAGGAG
CTGGGGACCCTGCATACAGAGGAGACGCAGGAAG
INTRON 40 - 41 36,144,252 36,146,031 1,780
GTCAGTGCGAGGCTGACTGAGGATA..........CTCACGGTCTGTGTTCTTTCCCCAG
41 EXON 41 36,140,027 36,144,251 1 - 4,225
GCTCTCAGAAGCATGAGGAATTATGATCTCTGGAGGAAGATGGGAAACCCACCTTGACAG
TTTGGACTAACTGCTGTTTTCTCTGATCTTTCGATACGACTGCTGATGAACGGATTGGGC
AGGTGTACCACACCTATTGATCTGAGCATTGATTTAGACTACTGCACCCTAGTGGGTGCT
AGATCCTTGGGGCTAAGGCTCTGTTGGATTTGTACCTCAGAGGAAGACAAGTGGCTGGTC
TTCTGGGACTCTTCTTCTCACCAGAGGGAGAAATGCCGGCAGCAACTGCAAGAAGCCCAG
TCCTTCGGTGCCCACAGCCCAGAGCACACACTGCTGTGCTGGCCCAGAAGCTGGGCAGAA
AGGTCACCATGTTCTTCCTTACCTCAGTTTACCTGCAGCCCTTGCTGCAGTGCAGATGCC
CACCCTGTACCAGGTCAGGCCGGCAGATGCTTCATCCATGCCTCAAGGTCTACGCCAACA
TGCTTCTCACGTCTCTTCCCCTCCCCGCCCCCTTCCCCAAGCACTAGGCTTGTTGTTTAA
TGGAGCCCAACCAATAATCATGTGTCTTCAGGGTTGGCTCAGTGCAGTTGCTAAGCAAAT
CAGTCTTCAGGAGAAACGGGGTGGTGTGGATAAGGCTGGAAGAAATGGCAGGTAGTGGAG
AGTGTTGGGGTGTTCGATGGAAGACAAAAACATGGACCGTTCTCTTCAGTCTAGTACCCA
GTGAACTGTCCAGGTAATTGTTTTGTAAACAATTTTTCTATTTATGAAAATGTGTGCTTT
TTCTTCTTACTTTCTAAAAAGCTGTTGGTTATCAGTTTCCTGGCTGGGCACAGGCGTCCT
GAGTCCCTCGGTGACCGCTCTCAGCGTGCTCAGCCTCCGTCTGGATGCACCATACTGTCT
GCCCTTTCCCTTGTAGAGTTTTCTCTCAGACCCAGGGGATAACTTTGGGTGTTTCTTCCC
CCAAATGCTCTCAGACCTGTGACCAGGAATGACTCTGTCTCTGGAACTCGGTTTCCTACA
CTCTGTCTTTCCCTTGTGCTTTGGCTCTGAGGGTCCCCTTTGGCTTTCGAGACTTGCCAA
GGTCTGGTCCAGTTCTAAGGTACTGCTGCTGTCTGAAGCAGCACCCTTCACTGCTTTGTG
TTCACAGCCACAGCCCAGCATCACCTCAGTAGCAGCCTGGGCTGAGGAGCCTTCCACGTG
TTGTTAACCTGGCTGGACAGGTGTGGGTGTGTGGTGTCATCTCTGCCCAGGACTCAGGGA
TCTACAGCAGAGTGTTAGTGTTGCTGGGCACAGGGTGTGGCTCAGTGGCAGACAGAGTGC
TTGTCTAGCAAGCCCAAGGCCTTCTGTCTGGTACTGTATCTCCCCACCCCCCCCATCCCC
CAAAAAAAGACTGAATATGAGGAATGAGTACTGTGGGTAACTAAGTTCTTGCCTGTCCAA
GCTAGGTAATATGTGTGTTACCATGGAAGAATGGCCTACAGGAGCCACAGTTGGGGATTT
GAGTGGGCAATTGTTAAGTAATAAGTAGAGACAGAAAACTGGATTGGGAATTCAGAGAAC
CAGCATTAACCCCCTTACCTCGTCAGCTGGAGCTCCCCCTGAGAGTCCTGGGCAGAGCAC
AAGTGTCCCCTCAGGTCAGGAGTCCACATAAGAGAACAAAGAGCAGCACTAAAAACAACA
TCATTTAGTTCGGTGCTCACGACACCCCAGAAACCAGCTGGGGGGCTGCTACCATCGGTC
GGTCAGCAGGGTTTTCTCCCTCTCCCTCTGCAGGCGCTTGGGTAGCAAGGACAGGCTGTA
GCAAGCCCTCTGACCTTGGAAAGGTGTCTGGGAATAAATTACTTCCCAGCTGTTTCAAGC
GATGTATTTTGACTCTTGGATTATCAAAGTGTTTTGTCATTTGTCATAAAGTCAGGGAAG
GGGCACACATCCCCAGACAAAGGGCCATGGAGGATACGTTTGAGACAAACATGTTCCATA
GCTTCTTAGCTTAACTAGCCCTTGACATTTATTGATACAGTGTATATTACAACATGAATT
TCAAAAAATAAAAAAATTACCACACATATATCAAGTAATATCTCCCCCCCCCCCATTTTC
AAATCTAAAAGTTAGCTTAAGAGCCAGACTTTGTTCAGGCTTCATGTCCACCCTGGATTA
AGCTCTCAGGGCTGCTGCGCCCGACTGTGAGCAGAAGCTGTCTTCCCAGTGTCCTGGGAG
CCTGGAGTGTTGAGCAGGAATAGTCAGTGCTCTGAGATGCTAGCCCGGTGGCCAGGGTCC
TTCTCTTACCAAATTATGTGTGCCTCCTCTGAGGAAGAGGAAGGCATGGGTCTCCTATGG
CCCTTTATTCCCTCGTGGGTCACTACACTGACATAAGTCATATTCAGAGCTGATGCTGGC
TAGGCCAGACCCTAAACTAAACCCTTCTAAAGCTGTCCAGGCCCCCCCTTTCCTGGTCCT
TCCTTGCTTCCTGTGGATTAAATCATCTCTACAAACTAAGCCACTGCCACAAATGGGCTG
CTGCCGGCAAGTGGCCCCGGAAGGGTGTCCCTGTCAGATTTCACCTGACATCCTCACCAC
GAAAAAGCATGTTGTAACTGAAAAGAGAGATGAGCTATTCTCCAAGAAGCAGGAAGTGAC
TGAGCAGACAGGATATTGAGGCTCCTGGAGAGCTCACCGCCATTCTTGGCCTGCGAATAA
ATGGTTCTTTGACCTCTTGTCATATAGCAGTAGAGTGTTTCCTTTCTGAATCACTAGGGT
AGTGTGACCTGTGACAAGTCAGACTGTGCCGATGTGAATCCATGAAAAGCGGCCCTTGAC
TGGACCTGGGGCTGTGGGGCACAGCTCTCCAGAGTCCTGGGTTAGAAGTATCCTGGATGC
ACCCATGTCGAGAGCGGTAATGTGCTGGTTTCATAAGATAGTTGGCGTTGTTACCCGGGC
AGAGGCTACATTTCTGGTTGAGCATGGTCGTCTCGGGGCGTGCATGCGTGCACTGTGCAG
GGCCTGTCTGGTCAGGAGCAGACTTCATGGCAGGTATGTTACCTGGCTCTCGTCTGAGTT
GCTGAAAGATGAGCTGAGAGCCCAGTGCTAAAGAAGGAAGAAAAGAACAAGCAAACAAAC
AAACAAAAAACAGGAAACAAACTTGACTGGCATAGTTTAGGACTGGTCAGATTTGGTCAC
CAGTATGAAGTCAACTCCTCTTGTCCGCGTGTCCTCCATTAAATTACCCTTCTAAAATTA
CCCTTCCTAGTTAGACCCGCATGCTTCAAGGAAATGATGCACCTGAGGCGTTGGGAAGGC
GCTCACTCCCATGCACTTTTCTGGGGAGAGTTCATGGAAGGCTGCCTAGAGGGACACGTG
CTGGCAGTACGGAGCACGACTTCTTAAGAGAGTTGTTGAGCCCGTGGCTTTATGGGATAT
TGTATGATGATCAGAGTCAATCAAACGGCTCCTCACGTTCTTGTTTACTAAGTAGGGGAG
CTGTTTTCTGTTGAAATTTCATGAACTCCCATTTTCTCTGCCTTAAGGTAATGAGGACTT
CTCAAATGCTGGATCAAGCTCAAGCACATTAAACATTGTCACTCAGGAAGTCACTAAAAT
TTCCAAGTGTCTGGAAGGGTCTCACCCCTCCCTCATTGCTGGTGTTTTGTGTCTCCGTGT
AATAACAGAAAGCTCTTCTGTGTTACATAGCCGTGGTGGGTTGGTGGATCCTTCTCGTGG
AGTCATTGCATGTTGACTGCCAAGAGCAGCTGAGCGTCGGTGCCAGGCATCAGCGTGGCA
CAGGGAAGTCCATCAGGTCGGGGACAGAAAGCGGGAGGCCTCTTCCTAGTCTCCCGGGTC
CTTAGCAGTGTGGAGGGTCCGTGACCGACCGTATGAGCAGGGCGTGGAGCCGTGGACTTT
CCCAGCCTGTGCTTTCTGCTTGCCTTACTTGACCCCGGTGGGCTCAACAAAGAAGTGGGC
ACCATTCCCTTAGCCAGATGCAAACTCTACTCACCCAAGGTCGGCAGTGCAACAGAGACT
ACCAAGCACTCTGTTTTCCTACCCAAAAAAAGGGGAAATGGAGAGAGAGCTTAGGGGTTT
TAAAGAAACTGTGTCCTACTCTGTCCATTCAAACCAACACCTCACTTGGCGATGAGGTTA
AACTCTGTGGATGTCTTAGTCCACGCGGGTTTCACCGTGAGAGTAAGATCTGTCCAACAC
AATAAAATTCCTCCTCTCTTCTTAC
3' upstream sequence
AGCTGTCTGCTTGTTCATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC
TCTCTCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGTGAAGG
GCAGACTGATAGAAGATAGTCTTACCCTTCACCTCTCAGAAGTCACGAAGCCTGAGAGGT
TGGGAGGTCCCAGGGTCTGGCCACAGTGAGTCCTACAGATCTTGGGCCAACAGCCAGGCC
CCCAACTCTGGGACCCGCCCCCAACTGAGCCTGGGTGACCAATGTGGTGATGACCTTGAG
AGGCAGCAGAGCAAAGCCTCCAAGTATGCTGCAGACCCCTCACGGGGTTCCTCCAGAGGC
CTGCAGGTTCTGCCCTCCCCTTGTCTGAGCTGCACGAGTGGAGCTGAACAGTTTGGCCGC
TCCAGGATCAGTGCACACTTGAGACTGATGTGCCCTTGCTGAGGTGGCAGTCAAGGCCTG
GTGCCTGTGGGGTGGAGGAGTTTAGTGGGCAGCAGAAGCTTCTACAGGGAAATGAAGCTT
AAATACAACCTGGCAAAGAAGCGGGAGCTCTGTGTCACTGTGTGTTTGGTTTTGCTTAGG
GGGGGGACTGGTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
TGTGCATGCACCTACTCTTCAAGAGTCCTCTCCTCTGTTTGAGACAAGTCTTCTCTGATA
GAACCCAGCAAATAAACTAACGAGCAGTCCCAGAGATCTCCCGTCTCTGACTCTTAAATT
TCGCTTGTTAATTCCTTATTGCTCTTAATGTGTCCTGCATTTATATCTTTATTCTCAAGT
TTTAATTATAAATGTATGAGTACTCAAGGCTCACAGCATAAAAGCTTGAAATATTAATCT
CTTGTTGATGATCACAATGAGTATACCATACCTGTCACCTTAGGCATCAGAGATGGTTTT
CTAGCTGGAAGGTCATCTGGGCGGTGTCCGCCATTACCCC..........

Sequence Detail Report

Gene Symbol (Gene ID) Uggt1 (ENSMUSG00000037470)
Transcript ID ENSMUST00000046875
SNP Information
Strain :
Sequence Retrieve :
Exon translate :
CDS Start ( 1 ) - End ( 1552 )
-
Strand : forward reverse
Show sequence : nucleotide amino acid
Color information