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Target CDS Information

Gene Symbol (Gene ID) Kank1 (ENSMUSG00000032702)
Cross Reference
CCDS CCDS37944.1
EMBL AC126944, AC132319
GO GO:0005634, GO:0005737, GO:0008013, ...show all
goslim_goa GO:0003674, GO:0005575, GO:0005622, ...show all
MGI_trans_name Kank1-001
OTTP OTTMUSP00000045223
OTTT OTTMUST00000084032
RefSeq_mRNA NM_181404.5
RefSeq_mRNA_predicted XM_006526585, XM_011247113.1
RefSeq_peptide NP_852069
RefSeq_peptide_predicted XP_006526647.1, XP_006526648.1, XP_011245415.1
UCSC uc008hbf.1
UniParc UPI00005B2F0E
Uniprot/SPTREMBL E9Q238
Vega_transcript Kank1-001, OTTMUST00000084032
Vega_translation 222473, OTTMUSP00000045223
Definition protein_id:ENSMUSP00000042177
translation:
MAYTTKVNGCAAEKADGVLNGDHNKEKKDPYFVETPYGFQLDLDFVKYVDDIQKGNTIKK
LNIQKRRKPSVPCPEVRAIPGHQGVWTSTESLSSSNSDDSKQCPSFLLARSHVTSTPIPR
PPAPLETSPTFAVSENRQLLPPPSPQLPRHNLHVTKTLMETRRRLEQERVTMQMAPGDFR
RPRLASFGGMGSTSSLPSFVGSANHSSAIHQLQNGYQGNGDYNSYVPAAPTTSSMGSSVR
HSPLSSGISTPVTNVSPMHLQHIREQMAIALKRLKELEEQVRTIPVLQVKISVLQEEKRQ
LASQLKSQRASSQNEACGVRKRSYSAGNASQLELLARARRGGGELYIDYEEEEMESVEQS
TQRIQEFRQLTADMQALERKIQDSSCEVASELRENGQCPSRECKSVAVGSDENMNDVVVY
HRDLRPCKDTAVGTVTETRNVGISVTEAMLGVITEADKEIELQQQTIEALKEKIYRLEVQ
LKETTHDREMTKLKQELQAAGSRKKVDKATMAQPLVFSKLVEALVPTRDQMVGSHVDTRE
SCVGTSVQTSSVGTSCHPDCKNQVVGSELPMNWWVVKERVAMHDQCVGRSVETCDRSVGV
EVSVCETGSNTEASGSDLTLLKTNLNLKDVRSIGCGDCSVDVIVCFPKECTSRSMNTEAV
GQEEAAVMAVPHTTDQHTSTNLERVDQCTNTEAATLVESCTNTLLSTMDKQTSTQTVEMR
TVAIGEGRVRDINPSTKTRSVGVGTVLSGNSEFDRPCAVKTKESGVGQINIQDNYLVGLK
MRTIACGPPQLTVGLMGSRRSVGVGNEPVGELPEESPQPRVASGMVTGLDHYIERVQRLL
AEQQTLLAENYSELAEAFGEPHSQIGSLNSQLISTLSSINSVMKSASTEELRNSDFQKAS
LGKTTGNHLEYTCKCGGLRSGGLLNVQPSQPEVEAETAEGKHSRGHEQFPMQGSTLPPVN
LTDDQIATGLYVCPNNENTLKSIMKKSDGNKDSNGAKKNLQFIGINGGYETTSSDESSSD
GSSSSESDDECDTIGYPPEEEEEEEEKDHDTRGMAEGHHAVNIEGFKSARVEDEVQVPEC
EPEKEEIRERYELSEKMLSACNLLKYNIKDPKALASKDMRICLNTLQHDWFRVSSQKSAV
PAMVGDYIAAFEAVSPDVLRYIINMADGNGNTALHYSVSHSNFQIVKLLLDADVCNVDHQ
NKAGYTPIMLAALAAVEAEKDMQVVEELFSCGDVNAKASQAGQTALMLAVSHGRIDMVKG
LLACGADVNIQDDEGSTALMCASEHGHVEIVKLLLAQPGCNGHLEDNDGSTALSIALEAG
HKDIAVLLYAHLNFSKAQSPSTPRLGRKTSPGPTHRGSFD

Chromosome 19
Length
Position(start - end)
55,088
25,378,494 - 25,433,583
Orient to Chromosome plus
Link Location : (19:25378494-25433583)
/

Detail Map


 

Report

Polymorphisms Report

Target Strain  MSMv4  JF1v3  KJRv1  SWNv1  CHDv1  NJLv1  BLG2v1  HMIv1  BFMv1  PGN2v1
Gene Symbol (Gene ID) Kank1 (ENSMUSG00000032702)
Transcript ID ENSMUST00000049400
Reports
substitution
cSNPs13
Insertion174
Deletion197
SNPs
-1kb
5'UTR
CDS
3'UTR
INTRON
+1kb
Insertions
-1kb
5'UTR
CDS
3'UTR
INTRON
+1kb
Deletions
-1kb
5'UTR
CDS
3'UTR
INTRON
+1kb
coding sequence substitutions
premature termination by the nucleotide substitution0
synonymous num10
non-synonymous num3
synonymous substitutions 25409318 (p.Glu90Glu), 25409729 (p.Pro227Pro), 25409990 (p.Asn314Asn), 25410164 (p.Ala372Ala), 25410281 (p.Asp411Asp), 25411643 (p.Ile865Ile), 25424228 (p.Pro1038Pro), 25428135 (p.Thr1172Thr), 25430980 (p.Glu1274Glu), 25432960 (p.Ser1339Ser),
non-synonymous substitutions 25410184 (p.Arg379Gln), 25411056 (p.Val670Met), 25411728 (p.Ser894Pro),
B6 transcript
(ENSMUST00000049400)
MAYTTKVNGCAAEKADGVLNGDHNKEKKDPYFVETPYGFQLDLDFVKYVDDIQKGNTIKK
LNIQKRRKPSVPCPEVRAIPGHQGVWTSTESLSSSNSDDSKQCPSFLLARSHVTSTPIPR
PPAPLETSPTFAVSENRQLLPPPSPQLPRHNLHVTKTLMETRRRLEQERVTMQMAPGDFR
RPRLASFGGMGSTSSLPSFVGSANHSSAIHQLQNGYQGNGDYNSYVPAAPTTSSMGSSVR
HSPLSSGISTPVTNVSPMHLQHIREQMAIALKRLKELEEQVRTIPVLQVKISVLQEEKRQ
LASQLKSQRASSQNEACGVRKRSYSAGNASQLELLARARRGGGELYIDYEEEEMESVEQS
TQRIQEFRQLTADMQALERKIQDSSCEVASELRENGQCPSRECKSVAVGSDENMNDVVVY
HRDLRPCKDTAVGTVTETRNVGISVTEAMLGVITEADKEIELQQQTIEALKEKIYRLEVQ
LKETTHDREMTKLKQELQAAGSRKKVDKATMAQPLVFSKLVEALVPTRDQMVGSHVDTRE
SCVGTSVQTSSVGTSCHPDCKNQVVGSELPMNWWVVKERVAMHDQCVGRSVETCDRSVGV
EVSVCETGSNTEASGSDLTLLKTNLNLKDVRSIGCGDCSVDVIVCFPKECTSRSMNTEAV
GQEEAAVMAVPHTTDQHTSTNLERVDQCTNTEAATLVESCTNTLLSTMDKQTSTQTVEMR
TVAIGEGRVRDINPSTKTRSVGVGTVLSGNSEFDRPCAVKTKESGVGQINIQDNYLVGLK
MRTIACGPPQLTVGLMGSRRSVGVGNEPVGELPEESPQPRVASGMVTGLDHYIERVQRLL
AEQQTLLAENYSELAEAFGEPHSQIGSLNSQLISTLSSINSVMKSASTEELRNSDFQKAS
LGKTTGNHLEYTCKCGGLRSGGLLNVQPSQPEVEAETAEGKHSRGHEQFPMQGSTLPPVN
LTDDQIATGLYVCPNNENTLKSIMKKSDGNKDSNGAKKNLQFIGINGGYETTSSDESSSD
GSSSSESDDECDTIGYPPEEEEEEEEKDHDTRGMAEGHHAVNIEGFKSARVEDEVQVPEC
EPEKEEIRERYELSEKMLSACNLLKYNIKDPKALASKDMRICLNTLQHDWFRVSSQKSAV
PAMVGDYIAAFEAVSPDVLRYIINMADGNGNTALHYSVSHSNFQIVKLLLDADVCNVDHQ
NKAGYTPIMLAALAAVEAEKDMQVVEELFSCGDVNAKASQAGQTALMLAVSHGRIDMVKG
LLACGADVNIQDDEGSTALMCASEHGHVEIVKLLLAQPGCNGHLEDNDGSTALSIALEAG
HKDIAVLLYAHLNFSKAQSPSTPRLGRKTSPGPTHRGSFD*
MSMv4 transcript
MAYTTKVNGCAAEKADGVLNGDHNKEKKDPYFVETPYGFQLDLDFVKYVDDIQKGNTIKK
LNIQKRRKPSVPCPEVRAIPGHQGVWTSTESLSSSNSDDSKQCPSFLLARSHVTSTPIPR
PPAPLETSPTFAVSENRQLLPPPSPQLPRHNLHVTKTLMETRRRLEQERVTMQMAPGDFR
RPRLASFGGMGSTSSLPSFVGSANHSSAIHQLQNGYQGNGDYNSYVPAAPTTSSMGSSVR
HSPLSSGISTPVTNVSPMHLQHIREQMAIALKRLKELEEQVRTIPVLQVKISVLQEEKRQ
LASQLKSQRASSQNEACGVRKRSYSAGNASQLELLARARRGGGELYIDYEEEEMESVEQS
TQRIQEFRQLTADMQALEQKIQDSSCEVASELRENGQCPSRECKSVAVGSDENMNDVVVY
HRDLRPCKDTAVGTVTETRNVGISVTEAMLGVITEADKEIELQQQTIEALKEKIYRLEVQ
LKETTHDREMTKLKQELQAAGSRKKVDKATMAQPLVFSKLVEALVPTRDQMVGSHVDTRE
SCVGTSVQTSSVGTSCHPDCKNQVVGSELPMNWWVVKERVAMHDQCVGRSVETCDRSVGV
EVSVCETGSNTEASGSDLTLLKTNLNLKDVRSIGCGDCSVDVIVCFPKECTSRSMNTEAV
GQEEAAVMAMPHTTDQHTSTNLERVDQCTNTEAATLVESCTNTLLSTMDKQTSTQTVEMR
TVAIGEGRVRDINPSTKTRSVGVGTVLSGNSEFDRPCAVKTKESGVGQINIQDNYLVGLK
MRTIACGPPQLTVGLMGSRRSVGVGNEPVGELPEESPQPRVASGMVTGLDHYIERVQRLL
AEQQTLLAENYSELAEAFGEPHSQIGSLNSQLISTLSSINSVMKSASTEELRNPDFQKAS
LGKTTGNHLEYTCKCGGLRSGGLLNVQPSQPEVEAETAEGKHSRGHEQFPMQGSTLPPVN
LTDDQIATGLYVCPNNENTLKSIMKKSDGNKDSNGAKKNLQFIGINGGYETTSSDESSSD
GSSSSESDDECDTIGYPPEEEEEEEEKDHDTRGMAEGHHAVNIEGFKSARVEDEVQVPEC
EPEKEEIRERYELSEKMLSACNLLKYNIKDPKALASKDMRICLNTLQHDWFRVSSQKSAV
PAMVGDYIAAFEAVSPDVLRYIINMADGNGNTALHYSVSHSNFQIVKLLLDADVCNVDHQ
NKAGYTPIMLAALAAVEAEKDMQVVEELFSCGDVNAKASQAGQTALMLAVSHGRIDMVKG
LLACGADVNIQDDEGSTALMCASEHGHVEIVKLLLAQPGCNGHLEDNDGSTALSIALEAG
HKDIAVLLYAHLNFSKAQSPSTPRLGRKTSPGPTHRGSFD*
homology99.78 (1361 / 1361)

Exon Detail Report

Target Strain  MSMv4  JF1v3  KJRv1  SWNv1  CHDv1  NJLv1  BLG2v1  HMIv1  BFMv1  PGN2v1
Gene Symbol (Gene ID) Kank1 (ENSMUSG00000032702)
Transcript ID ENSMUST00000049400
No. Exon / Intron Start End Start Phase End Phase Length Sequence
5' upstream sequence
..........TCTTCTTCTTCTTCTTCTTCTTCCTCCTCCTCCTCCTCCTCCTCCTCTTC
CTCCTCCTCTTCTCCCCACCCCCTTTCTTCTCTTTTTGGTTTTCTGTGTAGCCCTGGCTG
TCTGGAACTCACTCTGTAAACCAGGCTGGCCTGGAACTCAGAGATCCGCCTGCCTCTGCC
TCTCAAGTGCTGGGACCAAAGGCATGCAGCATCACTGCCCGGCTTCCAGGCTTCTGTTAT
GTTCCCCAGCAGTTATGTTGTTTTTGATCACTGGACTCTCTGTCTTTGGCCATCTTCTTG
AAAGAGGACTTGTGCCTCAGTTCCCAACTCATCTCTTGTGGATCTACTGCCCTTTCTTCT
GATGAAGCTTTTAGGGACAAGTGACTTCTTTCTTGTGCTCCACACCCTGTAGCCAGGCCT
TGTCAGTTTGGACTCCAGACTCCTCACTCTGCTAGGAGTGCTGGAAGGAATGAATCTAGG
TCCCTGCGGCTTGCTAGTTGGCTGGAACTTTCCATCGGCTCCAGAGCGGACTTGAAACCT
CGAGTCTCCTACTCCATTCAGGTTCCCAAGCCAACGTCTTAACGGCGCCCGGTAACAGGC
GCTATTAGGGTGCTACTCTGCTCCTGGCGCGCCCAGCTCCCAAGGTCGAAAACTTGCTCG
CACCGAACCCCCTCCAGGGCGAATGGGAGGGTCGCACGGGCGGGTAGGAACCAGTGGTGT
GGAGGTGCGCCTAGGAGAGTCGCGGCGGCGCGCAGGCGCACTGGGCTCTCCACGGCCGGC
TCTCGGGTACAAAGAGCGCGCGGTGCCTTGCGGACTTCTCGGTTAGAGCTGCAGCCGGTT
TGTGTCCCTGCACTCGGTGGCTCCCGGCAGCCGCAAGTTACTCTTGCACGGCCACTGCAG
GATTCTGCTCCGCGATCTAGTGTAACTGGGGTTTGAGTCTGGCGCTGCCCGAGGCCCCGC
CCAGCGCTTCTCGGTCCCTCCCCGCGAGCCGCCCGCCCTGTGCCAGCTCC
1 EXON 1 25,236,975 25,237,317 - - 343
AGATTCGCGGCGCTGGAGGTGAGTAGTGGCAACGCTGCGCTCCTGTCCCCTGCAGGGACG
ATCTGGGGCGCCTGAACTCCGACTCTACCCTGAGCCAACAGGGTGCCCAGCCTCACACTC
TTGGCGCGTGCTGGAGCGCACGGCGACACTGGCCCTGAGATTGCCCTGGGAAGGTCCGTG
GGGTTGCCTTGGCTAGCAGTCGCCTGGGATCACCGCTGGCGCTCGAGGGGGCGGCGCCTC
CCGACCTGGAGTGGGGCGCGCTGGTCCTTTGATACTAAGCCGTCCTTTCGGAGCCCGAGT
GCAGTGCAGTGCAGTGCAGCGCCCTTTTCCGAGGCGTCCCAGG
INTRON 1 - 2 25,237,318 25,274,747 37,430
GTAAGATTGGTGTACCCTCTGGCAG..........AACATATCTCATGGTGTCTTTACAG
2 EXON 2 25,274,748 25,274,834 - - 87
CCTGGAATGCTTCCGTGTGACGTTATTCCTTGAGAGGCAAGAACAAACATCTGCTTATCC
CAGCTAGGGAACTACTGACAGTCCAAG
INTRON 2 - 3 25,274,835 25,318,304 43,470
GTAAGGAGTCCAGCTGGGTGAGCCA..........CTCAATGAGATCTCTTTCCTCTCAG
3 EXON 3 25,318,305 25,318,432 - - 128
AATGATTGTGGTCATCCTGGACGGACTGCCGAGCCACTGAATTACACCCATCTTCTGGCC
ACACTACAGAAGTTGTCTATGGAGTTGAAATGTTTATTGCAGTAACCTCTGACCTTACGT
GATTTAAG
INTRON 3 - 4 25,318,433 25,378,410 59,978
GTAAGGTTATACTTTCTTCTCTTAT..........GATGGGGCTCTCTTTACCGTTTCAG
4 EXON 4 25,378,411 25,378,530 - 1 120
GTGGAGAGCCTTTGGGAACTTGCTGCATGACATTCGCACAAGTCGTCACTGTTTGCTGTG
TCCCTCCTTGGATTTGAGCCAGCATGGCTTATACCACAAAAGTTAATGGCTGTGCTGCAG
INTRON 4 - 5 25,378,531 25,409,085 30,555
GTAAGTGTGCTCAGAGGGAGAAAGA..........TGCCGTGTCTTCTTCTGTCTCTTAG
5 EXON 5 25,409,086 25,411,764 1 1 2,679
AAAAAGCAGACGGAGTTCTGAATGGAGACCATAACAAGGAAAAGAAAGACCCGTATTTTG
TGGAAACCCCTTACGGTTTTCAGCTAGACTTAGATTTCGTCAAATACGTGGATGACATAC
AAAAGGGAAATACTATCAAGAAACTGAACATCCAGAAGAGGCGAAAGCCATCTGTGCCAT
GTCCAGAAGTCAGGGCCATACCTGGTCATCAAGGTGTGTGGACTTCCACTGAATCTCTGT
CATCCTCCAACAGTGATGACAGCAAGCAGTGTCCCAGCTTCCTGCTAGCCAGAAGCCACG
TTACTTCAACCCCAATCCCACGGCCACCTGCCCCGCTAGAGACCTCACCCACTTTTGCTG
TGTCAGAAAACCGACAGCTGCTGCCCCCTCCCTCACCACAACTCCCCAGGCACAACCTCC
ATGTCACCAAGACGTTGATGGAGACCCGGAGAAGACTGGAACAGGAGCGAGTCACCATGC
AGATGGCACCGGGTGACTTCAGGAGGCCCAGGCTGGCCAGTTTTGGAGGCATGGGCTCCA
CAAGCTCCCTCCCGTCCTTTGTGGGGTCTGCTAACCACAGTTCTGCAATACACCAGCTTC
AGAATGGCTACCAAGGCAATGGGGATTATAACAGCTACGTCCCGGCAGCTCCTACCACGT
CTTCCATGGGAAGCTCCGTCCGGCACAGCCCATTGAGTTCAGGGATCTCCACCCCAGTGA
CCAACGTGAGCCCCATGCACCTGCAGCACATCCGAGAGCAGATGGCCATCGCCTTAAAAC
GCCTGAAGGAGCTTGAGGAGCAGGTGAGGACCATCCCTGTGCTCCAGGTCAAGATCTCCG
TCTTGCAAGAAGAGAAAAGGCAGTTGGCCTCGCAGCTGAAAAGCCAGAGGGCCTCGTCCC
AGAATGAAGCGTGCGGTGTGAGGAAACGCTCCTACAGTGCGGGCAACGCCTCCCAGCTGG
AACTGCTTGCCCGAGCCCGAAGAGGCGGCGGGGAATTGTACATCGACTACGAGGAGGAAG
AGATGGAGAGCGTAGAGCAGAGCACGCAGCGGATCCAGGAGTTCCGACAGCTCACGGCTG
ACATGCAGGCGCTGGAGCAGAAGATTCAGGATAGCAGCTGCGAGGTGGCATCAGAGCTCA
GGGAGAATGGGCAGTGCCCGTCTCGGGAGTGCAAGTCTGTGGCCGTGGGTAGTGACGAGA
ACATGAACGATGTCGTTGTATACCACAGAGACTTAAGGCCCTGCAAGGATACGGCTGTGG
GGACGGTCACCGAGACGAGGAATGTTGGCATCAGCGTGACAGAAGCTATGCTTGGGGTTA
TCACTGAAGCTGACAAAGAGATTGAGCTGCAGCAGCAGACCATAGAGGCCTTGAAGGAGA
AGATTTACCGCCTAGAAGTACAGCTTAAAGAAACCACCCATGACCGCGAGATGACTAAGC
TCAAGCAAGAACTACAGGCTGCCGGATCCAGGAAGAAAGTTGACAAGGCCACAATGGCCC
AGCCACTTGTCTTCAGCAAGTTGGTGGAGGCACTGGTGCCAACCAGAGATCAAATGGTTG
GCAGTCATGTGGACACAAGGGAGTCATGTGTTGGGACCTCTGTGCAAACTAGTAGCGTAG
GCACCTCCTGCCATCCTGACTGCAAGAACCAAGTCGTGGGATCCGAGCTGCCCATGAATT
GGTGGGTCGTGAAGGAGAGGGTGGCAATGCATGACCAATGCGTAGGGAGGTCTGTTGAGA
CTTGTGACCGGAGTGTGGGTGTGGAAGTCAGTGTCTGTGAAACAGGCAGCAACACAGAGG
CTTCTGGGAGCGACCTGACACTCCTTAAGACAAACTTGAACCTCAAAGACGTGCGGTCCA
TCGGCTGTGGAGATTGTTCCGTGGATGTGATTGTCTGCTTCCCCAAGGAGTGCACCTCCC
GAAGCATGAACACGGAGGCTGTAGGCCAGGAGGAAGCAGCTGTCATGGCGATGCCCCATA
CCACAGACCAGCACACCAGCACGAATCTGGAGCGGGTGGACCAGTGCACTAACACAGAGG
CAGCCACCCTGGTGGAGTCCTGCACCAACACTCTCCTCAGCACTATGGACAAGCAGACCA
GCACCCAGACTGTGGAGATGCGAACGGTGGCCATCGGAGAAGGCCGCGTCAGAGACATCA
ACCCCTCCACTAAGACTCGGTCCGTTGGTGTCGGGACAGTGCTGTCTGGCAATTCTGAGT
TTGACAGGCCATGTGCTGTGAAGACCAAAGAGTCGGGTGTGGGACAGATAAATATTCAGG
ACAACTATCTAGTTGGTCTCAAAATGCGGACCATAGCGTGCGGGCCTCCACAGTTGACTG
TGGGGCTGATGGGCAGCAGGAGGAGCGTGGGTGTTGGGAACGAGCCCGTAGGAGAGCTCC
CGGAGGAGTCTCCTCAGCCTCGGGTGGCGTCTGGAATGGTGACTGGCTTGGATCACTACA
TTGAGCGCGTGCAGAGGCTGCTGGCAGAGCAACAGACGTTGCTGGCTGAGAACTACAGTG
AGCTGGCGGAGGCTTTTGGGGAGCCTCATTCACAGATCGGCTCCCTCAACTCGCAGCTCA
TCAGCACCCTGTCGTCCATCAATTCCGTCATGAAGTCTGCAAGCACCGAGGAGCTCAGGA
ACCCTGACTTCCAGAAAGCCAGTCTGGGTAAAACTACAG
INTRON 5 - 6 25,411,765 25,422,143 10,379
GTAAGCGGTACCCTCACCCCACACC..........CCTGCACTCTTTTCCTTCTGAACAG
6 EXON 6 25,422,144 25,422,341 1 1 198
GAAATCACTTGGAATATACCTGCAAGTGTGGAGGCCTTCGGTCAGGAGGACTGTTAAATG
TACAACCATCCCAGCCTGAGGTGGAGGCGGAGACTGCAGAAGGCAAGCACAGCCGGGGCC
ATGAGCAGTTCCCCATGCAAGGAAGTACCCTGCCCCCGGTGAACCTGACAGATGACCAGA
TAGCCACTGGCCTCTACG
INTRON 6 - 7 25,422,342 25,422,918 577
GTAAGTCTTGCAGTTTGTGGCAACA..........ACTTGGATTTACTTTTTTTTTTCAG
7 EXON 7 25,422,919 25,423,027 1 2 109
TATGTCCAAATAATGAAAACACACTGAAGTCCATCATGAAGAAAAGTGATGGGAATAAAG
ATTCAAATGGAGCCAAAAAGAATCTTCAGTTCATTGGCATTAACGGCGG
INTRON 7 - 8 25,423,028 25,424,137 1,110
GTAAGGCACGCTGGTGGCGTTGGGG..........TCCTGAACTCCCAATTGCCACCTAG
8 EXON 8 25,424,138 25,424,383 2 2 246
GTATGAGACAACTTCAAGTGACGAATCCAGCTCGGATGGAAGCTCTTCTTCCGAGTCAGA
TGACGAGTGTGACACCATTGGGTACCCTCCTGAGGAAGAGGAGGAGGAGGAAGAGAAGGA
CCACGACACTCGGGGAATGGCGGAAGGGCACCACGCAGTTAATATTGAAGGTTTCAAGTC
TGCCAGGGTGGAAGATGAAGTGCAGGTTCCAGAATGTGAGCCTGAGAAGGAGGAAATCAG
AGAGAG
INTRON 8 - 9 25,424,384 25,425,896 1,513
GTGTGGTACATTTCCCCTCCCCTCC..........TTTTTCTCTTCTTTCTCCTCTTTAG
9 EXON 9 25,425,897 25,425,984 2 0 88
GTATGAACTAAGTGAAAAGATGTTGTCAGCCTGCAACTTACTGAAATACAACATAAAGGA
TCCCAAAGCTTTGGCCAGCAAAGATATG
INTRON 9 - 10 25,425,985 25,427,976 1,992
GTAAGTCTGTGTGGTAGGAACAATG..........TAACAGCAAGTTGGTGTTTTGGCAG
10 EXON 10 25,427,977 25,428,196 0 1 220
AGGATCTGTCTGAACACCCTCCAGCACGATTGGTTCCGAGTGTCCAGTCAGAAGTCCGCC
GTGCCAGCCATGGTGGGCGACTACATCGCCGCGTTCGAGGCTGTCTCCCCGGACGTGCTC
CGGTACATCATCAACATGGCGGACGGCAATGGCAACACCGCCCTCCACTACAGCGTGTCC
CACTCCAACTTCCAGATCGTCAAGCTGCTTCTGGATGCAG
INTRON 10 - 11 25,428,197 25,430,220 2,024
GTACAGAGGACCCTGTTGTCCCCCT..........CCCTAAAGAGATTTCTTTCTTGTAG
11 EXON 11 25,430,221 25,430,363 1 0 143
ACGTGTGCAATGTGGATCACCAGAACAAGGCAGGGTACACACCCATCATGCTGGCAGCCC
TCGCGGCCGTGGAGGCAGAGAAGGACATGCAGGTCGTAGAAGAACTCTTCAGCTGTGGAG
ACGTGAACGCCAAGGCCAGTCAG
INTRON 11 - 12 25,430,364 25,430,878 515
GTTAGTGCCTCACTCACCACACTGA..........GCTCTAACCATCATTTCTCTCCTAG
12 EXON 12 25,430,879 25,431,079 0 0 201
GCGGGACAGACGGCCCTCATGCTAGCTGTCAGTCACGGGCGGATAGACATGGTGAAGGGC
CTGCTGGCCTGTGGAGCTGATGTCAATATCCAGGACGACGAAGGCTCCACCGCCCTGATG
TGTGCCAGTGAACACGGGCATGTGGAGATTGTGAAGCTGCTGCTGGCCCAGCCAGGCTGC
AATGGCCACCTGGAAGACAAT
INTRON 12 - 13 25,431,080 25,432,864 1,785
GTGAGTGCCACTGGACCTCCAGCCA..........CCTGTTGTTTTCGTTTCCTCTTTAG
13 EXON 13 25,432,865 25,432,963 0 0 99
GATGGCAGCACCGCTCTCTCCATAGCCCTGGAAGCTGGACACAAGGACATTGCCGTTCTT
CTGTACGCCCACCTCAACTTCTCGAAAGCCCAGTCTCCG
INTRON 13 - 14 25,432,964 25,433,520 557
GTCAGTAGCAGGCATTTGGCATTTA..........TTTTCCCCCCTTTCCTGGTCTCTAG
14 EXON 14 25,433,521 25,434,496 0 - 976
AGCACCCCGAGGCTTGGCAGAAAGACATCTCCTGGTCCCACTCACCGAGGTTCTTTTGAC
TGATTATGTAAGCATGGCCCTTGTGTGTACCACCACGAAGCTGCTAGTTATTCCTGTTGG
GTTGACAGATACTGAATGTAAATGGACCACACCAAGCTGACCAGCAGACAGAAGAGTCAA
GGAGCGGCTGAAGGCTGATGCTTCTGCAGGGAAAGCCGAGCTGTTGGGAAATGGCCTCCT
CTCTGGCCCTCTGCTCTAGTAGAGCTTGGATCCCGCTCCGTGGCTGCTGAACCGGCTCTG
TTATTTGCAGTGGTAGGAAATGGTAGACTGGCCTGATCAGGCCATTTCTACCATATAAGC
AAATGTCAGGTTCTCTATGACATTGTAGTTTTGACCTTTTCCACAAGTGCTTAGTAACTT
ATGAAATGTGGAGCCGTTGGGAAGTCCTTCCAGTATTCCATTCCAGGGTGCTTCTTGCTT
CTGTTCACTTTTCTTTTGTCTTTTAAAATAAGAACCTTGGGGGAGAGGACTTTGATCGTC
AGCAACTTGCCCCCCCCCCACGCTGATAATTTCCCGCTTAAAAATAGAAGATGGAACTCT
CAAACCATATGTATAAACTTACAAGAAATATTTCATTTGGTTTATCGAGGTGGATGTATT
ATATGGCTTTTTATATAAAAGACTTCTATATGAAATTGACAACAGTATTTTCAACTTTTA
TATTCCACAGTACAGTCATAAAGAGCTACATGTAATGTTACGTTTTGAGCATCTGCCCAA
CCATGTCTATATCTGGTGATAAAGGTTTGAATTAGGTTAGAGGACTGGGTGCCAGATTTG
GGTCTATGGAGGCAGAGTGTAGTTCTCTGTGTATTTCTATCATACGCCACGTTTACTTTG
GTCCTGTATATGTATTTAAATGTTTGAAGTGCCTTAGACTCTTGCCATATTTTCAAAATA
AAATTTCATTAAGCTC
3' upstream sequence
TGTTGCTTGCCCCTGCTTCATCACTGACAGCTGTCTGCCTGGCTCGGATGACTAACAGCA
GTGGCCACAAGCTCTGATGGATGGTTTGAGCTTCAAGAACAAGAGCATGGTCTATTGGCC
TCAGGCTCCAACCAGGGCAGCCTTCTGAGTGTGCTTGAGTCTGTGACACAGGTTCCATAC
CCCCAGGCTGCATGTCACAACGTTGAAACTTAAAACCTTATACACTAATACCAGGCAGGT
AACCTCTAGGGAGCCCCCAGAGTTGTTTCTTCCCAGATGCATGGATGTTAGCTAGTCCTG
AACTAATTTGGGGGTGTAGCTATCTGTGGTTGGCTAAATGGGGAGAGGAAGCCAGACAGA
CTTTTTGAAAGTTTTGTGTCTTCCAGAGAAACGTTAGAGGGTCATGAGAAAAGTAGTAGG
GATGGACTCGAGTCGGCCTGGGCCAGCTGAACACTCTGCAGGAGGCCGGGAGCTCCTAGG
ACAGAAATCTGTTCTCATGTGTGAACTGTAAAAATGAGGTTACAGAGACTGGGACTTCCA
AATTGCTCTCTCCCTCCCCAGACAGATCTGCGAGCTCTGGGATTCAGGCTAAATTTTGGC
TCAGGAAGTTATTAAAGCCAAAGTCCCATGGACCGGAAATAGGTAAAATAAATTAGTGGG
GGTGAGGGGGGTCTATGAAGGGAAGTGGTTTGGGGCCTTGTATCTCCCTTAATGGCCCTA
AGCGCCTGTTGAGCAAAGAGCTCTTTCTCAGGAGGTTTATGGTCCTGGGGATTTTGTTTT
TCTGAGAAGAAAAAGCATTAATGCTGTGATTGTGGGCCGGGATAGAGTCTTCTGGTGGTG
TTTACCTAACACACACACACATACACACGCGCGCGGCCCTGAGTTCAATCCCCAGCGCTA
ACCAAAAAAAAAAGCTTAAAAAAATATTATAGATGAATGAGAAAAACGAAAGGAGCCCTT
GTGCTCTGATAAAACAAGTGCTTATTTTATCTCTGAGTAA..........

Sequence Detail Report

Gene Symbol (Gene ID) Kank1 (ENSMUSG00000032702)
Transcript ID ENSMUST00000049400
SNP Information
Strain :
Sequence Retrieve :
Exon translate :
CDS Start ( 1 ) - End ( 1361 )
-
Strand : forward reverse
Show sequence : nucleotide amino acid
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