MoG+ -Mouse Genome database with high added value-

Target CDS Information

Gene Symbol (Gene ID)

Il1rl1 (ENSMUSG00000026069)

Cross Reference

CCDS	CCDS35548.1
EMBL	D13695, M24843, X60184, ...show all
GO	GO:0002113, GO:0002114, GO:0002826, ...show all
goslim_goa	GO:0003674, GO:0004871, GO:0005575, ...show all
MGI_trans_name	Il1rl1-201
protein_id	AAA40160.1, BAA02854.1, CAA42742.1, ...show all
UCSC	uc007aub.3
UniParc	UPI0000029617
Uniprot/SWISSPROT	P14719

Definition

protein_id:ENSMUSP00000054914
translation:

MIDRQRMGLWALAILTLPMYLTVTEGSKSSWGLENEALIVRCPQRGRSTYPVEWYYSDTN
ESIPTQKRNRIFVSRDRLKFLPARVEDSGIYACVIRSPNLNKTGYLNVTIHKKPPSCNIP
DYLMYSTVRGSDKNFKITCPTIDLYNWTAPVQWFKNCKALQEPRFRAHRSYLFIDNVTHD
DEGDYTCQFTHAENGTNYIVTATRSFTVEEKGFSMFPVITNPPYNHTMEVEIGKPASIAC
SACFGKGSHFLADVLWQINKTVVGNFGEARIQEEEGRNESSSNDMDCLTSVLRITGVTEK
DLSLEYDCLALNLHGMIRHTIRLRRKQPIDHRSIYYIVAGCSLLLMFINVLVIVLKVFWI
EVALFWRDIVTPYKTRNDGKLYDAYIIYPRVFRGSAAGTHSVEYFVHHTLPDVLENKCGY
KLCIYGRDLLPGQDAATVVESSIQNSRRQVFVLAPHMMHSKEFAYEQEIALHSALIQNNS
KVILIEMEPLGEASRLQVGDLQDSLQHLVKIQGTIKWREDHVADKQSLSSKFWKHVRYQM
PVPERASKTASVAAPLSGKACLDLKHF

Chromosome

Length
Position(start - end)

21,418
40,440,750 - 40,462,169

Orient to Chromosome

plus

Link

Location : (1:40440750-40462169)
/

Detail Map

name	Il1rl1 (ENSMUSG00000026069)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : Il1rl1 note : interleukin 1 receptor-like 1 [Source:MGI Symbol;Acc:MGI:98427]

name	Il18r1 (ENSMUSG00000026070)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : Il18r1 note : interleukin 18 receptor 1 [Source:MGI Symbol;Acc:MGI:105383]

name	Il1rl1 (ENSMUSG00000026069)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000174335

name	Il1rl1 (ENSMUSG00000026069)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000173881

name	Il1rl1 (ENSMUSG00000026069)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000097772

name	Il1rl1 (ENSMUSG00000026069)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000173514

name	Il1rl1 (ENSMUSG00000026069)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000053043

name	Il18r1 (ENSMUSG00000026070)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000167723

name	Il18r1 (ENSMUSG00000026070)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000193391

name	Il18r1 (ENSMUSG00000026070)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000193793

name	Il18r1 (ENSMUSG00000026070)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000195684

name	Il18r1 (ENSMUSG00000026070)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000087983

name	Il18r1 (ENSMUSG00000026070)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000108044

name	Il1rl1 (ENSMUSG00000026069) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS56626.1 RefSeq_peptide:NP_001281100 RefSeq_mRNA:NM_001294171.1 Vega_transcript:Il1rl1-003 Vega_transcript:OTTMUST00000097565 Uniprot/SPTREMBL:Q5D095 UCSC:uc007atz.4 Fantom:9030010H19 EMBL:AK033417 EMBL:BC051445 MGI_trans_name:Il1rl1-003 Vega_translation:179124 Vega_translation:OTTMUSP00000054734 protein_id:AAH51445.1 protein_id:BAC28277.1 OTTP:OTTMUSP00000054734 OTTT:OTTMUST00000097565 UniParc:UPI0000003FD2
definition	note : transcript_id=ENSMUST00000174335 protein_id : ENSMUSP00000134351 translation : MIDRQRMGLWALAILTLPMYLTVTEGSKSSWGLENEALIVRCPQRGRSTYPVEWYYSDTNESIPTQKRNRIFVSRDRLKFLPARVEDSGIYACVIRSPNLNKTGYLNVTIHKKPPSCNIPDYLMYSTVRGSDKNFKITCPTIDLYNWTAPVQWFKNCKALQEPRFRAHRSYLFIDNVTHDDEGDYTCQFTHAENGTNYIVTATRSFTVEEKGFSMFPVITNPPYNHTMEVEIGKPASIACSACFGKGSHFLADVLWQINKTVVGNFGEARIQEEEGRNESSSNDMDCLTSVLRITGVTEKDLSLEYDCLALNLHGMIRHTIRLRRKQPSKECPSHIA

name	Il1rl1 (ENSMUSG00000026069) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:Il1rl1-004 Vega_transcript:OTTMUST00000097571 Uniprot/SPTREMBL:G3UYU3 EMBL:AC167126 EMBL:AC167168 GO:GO:0002113 GO:GO:0002114 GO:GO:0005578 GO:GO:0009897 GO:GO:0016020 GO:GO:0038172 GO:GO:0043124 MGI_trans_name:Il1rl1-004 Vega_translation:179125 Vega_translation:OTTMUSP00000054738 goslim_goa:GO:0003674 goslim_goa:GO:0004871 goslim_goa:GO:0005575 goslim_goa:GO:0005576 goslim_goa:GO:0005578 goslim_goa:GO:0005623 goslim_goa:GO:0005886 goslim_goa:GO:0007165 goslim_goa:GO:0008150 OTTP:OTTMUSP00000054738 OTTT:OTTMUST00000097571 UniParc:UPI00021CF75E
definition	note : transcript_id=ENSMUST00000173881 protein_id : ENSMUSP00000134225 translation : MIDRQRMGLWALAILTLPMYLTVTEGSKSSWGLENEALIVRCPQRGRSTYPVEWYYSDTNESIPT

name	Il1rl1 (ENSMUSG00000026069) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS35548.1 Uniprot/SWISSPROT:P14719 RefSeq_peptide:NP_001020773 RefSeq_mRNA:NM_001025602.3 RefSeq_mRNA_predicted:XM_006495741.1 RefSeq_mRNA_predicted:XM_006495743.2 RefSeq_mRNA_predicted:XM_006495744.2 RefSeq_peptide_predicted:XP_006495804.1 RefSeq_peptide_predicted:XP_006495806.1 RefSeq_peptide_predicted:XP_006495807.1 Vega_transcript:Il1rl1-001 Vega_transcript:OTTMUST00000097562 UCSC:uc007aub.3 EMBL:D13695 EMBL:M24843 EMBL:X60184 EMBL:Y07519 GO:GO:0002113 GO:GO:0002114 GO:GO:0002826 GO:GO:0004908 GO:GO:0005515 GO:GO:0005578 GO:GO:0005615 GO:GO:0008285 GO:GO:0009897 GO:GO:0009986 GO:GO:0016020 GO:GO:0016021 GO:GO:0032689 GO:GO:0032754 GO:GO:0038172 GO:GO:0043032 GO:GO:0043124 GO:GO:0050729 GO:GO:0090197 GO:GO:1901653 MGI_trans_name:Il1rl1-001 Vega_translation:179126 Vega_translation:OTTMUSP00000054731 goslim_goa:GO:0003674 goslim_goa:GO:0004871 goslim_goa:GO:0005575 goslim_goa:GO:0005576 goslim_goa:GO:0005578 goslim_goa:GO:0005623 goslim_goa:GO:0005886 goslim_goa:GO:0007165 goslim_goa:GO:0008150 protein_id:AAA40160.1 protein_id:BAA02854.1 protein_id:CAA42742.1 protein_id:CAA68812.1 OTTP:OTTMUSP00000054731 OTTT:OTTMUST00000097562 UniParc:UPI0000029617
definition	note : transcript_id=ENSMUST00000097772 protein_id : ENSMUSP00000095379 translation : MIDRQRMGLWALAILTLPMYLTVTEGSKSSWGLENEALIVRCPQRGRSTYPVEWYYSDTNESIPTQKRNRIFVSRDRLKFLPARVEDSGIYACVIRSPNLNKTGYLNVTIHKKPPSCNIPDYLMYSTVRGSDKNFKITCPTIDLYNWTAPVQWFKNCKALQEPRFRAHRSYLFIDNVTHDDEGDYTCQFTHAENGTNYIVTATRSFTVEEKGFSMFPVITNPPYNHTMEVEIGKPASIACSACFGKGSHFLADVLWQINKTVVGNFGEARIQEEEGRNESSSNDMDCLTSVLRITGVTEKDLSLEYDCLALNLHGMIRHTIRLRRKQPIDHRSIYYIVAGCSLLLMFINVLVIVLKVFWIEVALFWRDIVTPYKTRNDGKLYDAYIIYPRVFRGSAAGTHSVEYFVHHTLPDVLENKCGYKLCIYGRDLLPGQDAATVVESSIQNSRRQVFVLAPHMMHSKEFAYEQEIALHSALIQNNSKVILIEMEPLGEASRLQVGDLQDSLQHLVKIQGTIKWREDHVADKQSLSSKFWKHVRYQMPVPERASKTASVAAPLSGKACLDLKHF

name	Il1rl1 (ENSMUSG00000026069) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS56626.1 RefSeq_peptide:NP_034873 RefSeq_mRNA:NM_010743.3 Vega_transcript:Il1rl1-002 Vega_transcript:OTTMUST00000097566 Uniprot/SPTREMBL:Q5D095 UCSC:uc007aua.3 Fantom:9030010H19 EMBL:AK033417 EMBL:BC051445 MGI_trans_name:Il1rl1-002 Vega_translation:179127 Vega_translation:OTTMUSP00000054735 protein_id:AAH51445.1 protein_id:BAC28277.1 OTTP:OTTMUSP00000054735 OTTT:OTTMUST00000097566 UniParc:UPI0000003FD2
definition	note : transcript_id=ENSMUST00000173514 protein_id : ENSMUSP00000133784 translation : MIDRQRMGLWALAILTLPMYLTVTEGSKSSWGLENEALIVRCPQRGRSTYPVEWYYSDTNESIPTQKRNRIFVSRDRLKFLPARVEDSGIYACVIRSPNLNKTGYLNVTIHKKPPSCNIPDYLMYSTVRGSDKNFKITCPTIDLYNWTAPVQWFKNCKALQEPRFRAHRSYLFIDNVTHDDEGDYTCQFTHAENGTNYIVTATRSFTVEEKGFSMFPVITNPPYNHTMEVEIGKPASIACSACFGKGSHFLADVLWQINKTVVGNFGEARIQEEEGRNESSSNDMDCLTSVLRITGVTEKDLSLEYDCLALNLHGMIRHTIRLRRKQPSKECPSHIA

name	Il1rl1 (ENSMUSG00000026069) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS35548.1 Uniprot/SWISSPROT:P14719 UCSC:uc007aub.3 EMBL:D13695 EMBL:M24843 EMBL:X60184 EMBL:Y07519 GO:GO:0002113 GO:GO:0002114 GO:GO:0002826 GO:GO:0004908 GO:GO:0005515 GO:GO:0005578 GO:GO:0009897 GO:GO:0016020 GO:GO:0016021 GO:GO:0032689 GO:GO:0032754 GO:GO:0038172 GO:GO:0043032 GO:GO:0043124 GO:GO:0050729 GO:GO:0090197 MGI_trans_name:Il1rl1-201 goslim_goa:GO:0003674 goslim_goa:GO:0004871 goslim_goa:GO:0005575 goslim_goa:GO:0005576 goslim_goa:GO:0005578 goslim_goa:GO:0005623 goslim_goa:GO:0005886 goslim_goa:GO:0007165 goslim_goa:GO:0008150 protein_id:AAA40160.1 protein_id:BAA02854.1 protein_id:CAA42742.1 protein_id:CAA68812.1 UniParc:UPI0000029617
definition	note : transcript_id=ENSMUST00000053043 protein_id : ENSMUSP00000054914 translation : MIDRQRMGLWALAILTLPMYLTVTEGSKSSWGLENEALIVRCPQRGRSTYPVEWYYSDTNESIPTQKRNRIFVSRDRLKFLPARVEDSGIYACVIRSPNLNKTGYLNVTIHKKPPSCNIPDYLMYSTVRGSDKNFKITCPTIDLYNWTAPVQWFKNCKALQEPRFRAHRSYLFIDNVTHDDEGDYTCQFTHAENGTNYIVTATRSFTVEEKGFSMFPVITNPPYNHTMEVEIGKPASIACSACFGKGSHFLADVLWQINKTVVGNFGEARIQEEEGRNESSSNDMDCLTSVLRITGVTEKDLSLEYDCLALNLHGMIRHTIRLRRKQPIDHRSIYYIVAGCSLLLMFINVLVIVLKVFWIEVALFWRDIVTPYKTRNDGKLYDAYIIYPRVFRGSAAGTHSVEYFVHHTLPDVLENKCGYKLCIYGRDLLPGQDAATVVESSIQNSRRQVFVLAPHMMHSKEFAYEQEIALHSALIQNNSKVILIEMEPLGEASRLQVGDLQDSLQHLVKIQGTIKWREDHVADKQSLSSKFWKHVRYQMPVPERASKTASVAAPLSGKACLDLKHF

name
type	STS
link
xref	UniSTS_NUM:128456 UniSTS:D1Mit122.1
definition	note : map_weight=1 standard_name : D1Mit122.1

name
type	STS
link
xref	UniSTS_NUM:128455 UniSTS:D866 WI_GEN:D1Mit122
definition	note : map_weight=1 standard_name : D866

name
type	STS
link
xref	UniSTS_NUM:124946 UniSTS:M24843
definition	note : map_weight=1 standard_name : M24843

name
type	STS
link
xref	UniSTS_NUM:178380 UniSTS:D13695
definition	note : map_weight=1 standard_name : D13695

name
type	misc_feature
link
xref
definition	note : contig AC167168.5 1..133528(-1)

name
type	misc_feature
link
xref
definition	note : contig AC167126.6 50370..156900(1)

Polymorphisms Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Il1rl1 (ENSMUSG00000026069)
Transcript ID	ENSMUST00000053043

Reports
substitution
cSNPs	16
Insertion	18
Deletion	17
SNPs	-1kb 40436214(c.-4536C>T), 40436268(c.-4482A>G), 40436274(c.-4476A>G), 40436552(c.-4198A>G), 40436659(c.-4091C>T), 40436671(c.-4079C>T), 40436699(c.-4051A>G), 40436704(c.-4046G>T), 40436706(c.-4044T>G), 40436731(c.-4019G>A), 40436773(c.-3977C>T), 40436952(c.-3798G>A), 40437060(c.-3690T>C), 40437218(c.-3532T>C), 40437299(c.-3451T>C), 40437327(c.-3423A>C), 40437403(c.-3347G>A), 40437502(c.-3248T>A), 40437588(c.-3162A>G), 40437656(c.-3094A>G), 40437852(c.-2898G>A), 40437898(c.-2852G>A), 40437972(c.-2778A>G), 40438541(c.-2209C>T), 40438558(c.-2192C>T), 40438578(c.-2172A>T), 40438800(c.-1950G>C), 40438923(c.-1827C>A), 40439030(c.-1720C>G), 40439205(c.-1545A>C), 40439384(c.-1366A>G), 40439402(c.-1348C>G), 40439537(c.-1213T>C), 40439541(c.-1209T>C), 40439945(c.-805A>T), 40440452(c.-298G>C), 40440563(c.-187A>G), 40440573(c.-177A>G), 40440590(c.-160C>T), 5'UTR 40440634(c.-116C>T), 40440672(c.-78T>C), 40440673(c.-77G>A), 40440678(c.-72C>A), 40440724(c.-26A>G), 40440747(c.-3C>A), CDS 40440763(c.14A>G), 40440795(c.46A>G), 40440804(c.55A>G), 40441293(c.81T>C), 40441356(c.144G>A), 40446588(c.898A>C), 40446626(c.936C>T), 40450192(c.1103A>G), 40450193(c.1104T>C), 40450215(c.1126C>T), 40450220(c.1131C>T), 40451751(c.1191G>A), 40451757(c.1197C>T), 40451823(c.1263A>G), 40451848(c.1288T>C), 40462111(c.1646C>T), 3'UTR 40462217(c.48C>A), 40462231(c.62C>T), 40462244(c.75C>T), 40462705(c.536T>C), 40462851(c.682C>T), 40462975(c.806C>T), 40462985(c.816A>T), 40463051(c.882C>A), 40463063(c.894A>G), 40463164(c.995G>T), 40463184(c.1015C>T), 40463281(c.1112G>A), 40463308(c.1139G>A), 40463524(c.1355C>T), 40463669(c.1500A>T), 40463772(c.1603C>T), 40463781(c.1612C>T), 40463974(c.1805G>A), 40464173(c.2004G>A), 40464185(c.2016T>C), 40464284(c.2115A>G), 40464395(c.2226T>G), 40464533(c.2364C>T), 40464534(c.2365A>G), 40464716(c.2547C>T), 40464717(c.2548A>G), 40465128(c.2959T>C), 40465149(c.2980C>T), 40465173(c.3004T>C), 40465196(c.3027G>C), 40465226(c.3057C>G), 40465309(c.3140A>G), INTRON 40440863(c.79+35G>T), 40441204(c.80-88T>C), 40441256(c.80-36A>G), 40441512(c.290+10A>G), 40441558(c.290+56T>C), 40441561(c.290+59T>A), 40441752(c.290+250A>C), 40441798(c.290+296A>C), 40441803(c.290+301T>G), 40441810(c.290+308T>C), 40441917(c.291-389T>A), 40441960(c.291-346C>T), 40442101(c.291-205T>G), 40442120(c.291-186T>C), 40442191(c.291-115C>A), 40443380(c.628+619T>G), 40443429(c.628+668A>G), 40443826(c.629-508A>G), 40444043(c.629-291T>C), 40444046(c.629-288T>C), 40444115(c.629-219G>A), 40444526(c.697+124A>G), 40444960(c.697+558G>A), 40444970(c.697+568G>A), 40445029(c.697+627G>A), 40445290(c.698-797C>T), 40445404(c.698-683A>G), 40445506(c.698-581A>G), 40445562(c.698-525T>G), 40445570(c.698-517C>A), 40445634(c.698-453T>G), 40445716(c.698-371T>C), 40445854(c.698-233A>G), 40445924(c.698-163A>C), 40446014(c.698-73T>C), 40446472(c.840-58G>C), 40446489(c.840-41G>A), 40446514(c.840-16T>C), 40446793(c.985+118A>T), 40446883(c.985+208C>T), 40447011(c.985+336A>G), 40447313(c.985+638A>G), 40447586(c.985+911T>C), 40447640(c.985+965G>A), 40447737(c.985+1062G>A), 40448065(c.985+1390T>C), 40448199(c.985+1524T>A), 40448213(c.985+1538G>C), 40448229(c.985+1554C>T), 40448556(c.986-1519G>A), 40448653(c.986-1422A>C), 40448713(c.986-1362T>C), 40448729(c.986-1346G>C), 40448905(c.986-1170G>A), 40448914(c.986-1161G>A), 40448935(c.986-1140G>A), 40448968(c.986-1107T>C), 40448984(c.986-1091G>A), 40449011(c.986-1064A>G), 40449267(c.986-808C>T), 40449272(c.986-803A>T), 40449287(c.986-788C>T), 40449302(c.986-773C>A), 40449351(c.986-724C>T), 40449366(c.986-709A>C), 40449401(c.986-674C>T), 40449403(c.986-672C>T), 40449486(c.986-589A>G), 40449488(c.986-587T>C), 40449573(c.986-502G>A), 40449685(c.986-390C>T), 40449696(c.986-379C>T), 40449862(c.986-213C>T), 40449926(c.986-149A>T), 40449952(c.986-123G>A), 40449996(c.986-79G>A), 40450059(c.986-16C>T), 40450272(c.1132+51C>A), 40450390(c.1132+169A>G), 40450438(c.1132+217T>C), 40450480(c.1132+259A>G), 40450508(c.1132+287T>G), 40450719(c.1132+498A>G), 40450740(c.1132+519A>T), 40450799(c.1132+578C>T), 40451283(c.1133-410T>A), 40451300(c.1133-393A>T), 40451561(c.1133-132G>A), 40451587(c.1133-106G>T), 40451617(c.1133-76A>C), 40451645(c.1133-48A>G), 40451965(c.1300+105A>C), 40451993(c.1300+133T>C), 40452209(c.1300+349G>C), 40458884(c.1301-2882T>C), 40459008(c.1301-2758T>C), 40459016(c.1301-2750C>T), 40459040(c.1301-2726A>G), 40459270(c.1301-2496T>A), 40459271(c.1301-2495G>T), 40459272(c.1301-2494A>G), 40459276(c.1301-2490C>T), 40459302(c.1301-2464G>A), 40459304(c.1301-2462C>T), 40459394(c.1301-2372A>T), 40459701(c.1301-2065C>T), 40460474(c.1301-1292G>A), 40460509(c.1301-1257G>T), 40460517(c.1301-1249A>G), 40460927(c.1301-839A>G), 40460945(c.1301-821T>A), 40460989(c.1301-777A>G), 40461147(c.1301-619A>G), 40461235(c.1301-531C>T), 40461275(c.1301-491C>T), 40461302(c.1301-464T>C), 40461308(c.1301-458T>C), 40461375(c.1301-391A>G), 40461517(c.1301-249T>C), 40461676(c.1301-90A>G), +1kb 40465564(c.3395C>G), 40465671(c.3502G>C), 40465687(c.3518T>C), 40465775(c.3606T>G), 40465797(c.3628T>C), 40465902(c.3733G>A), 40466096(c.3927A>C), 40466133(c.3964T>C), 40466252(c.4083T>A), 40467088(c.4919C>T), 40467098(c.4929T>C), 40467179(c.5010C>T), 40467343(c.5174G>A), 40467405(c.5236C>T), 40467440(c.5271G>A), 40467582(c.5413A>T), 40467814(c.5645C>T), 40467952(c.5783T>A), 40468219(c.6050T>C), 40468276(c.6107T>C), 40468375(c.6206T>C), 40468376(c.6207T>C), 40468561(c.6392A>G), 40468568(c.6399G>C), 40468678(c.6509T>C), 40468778(c.6609A>C), 40468831(c.6662A>T), 40468837(c.6668A>G), 40468844(c.6675A>G), 40469084(c.6915T>C), 40469085(c.6916G>A), 40469157(c.6988T>C), 40469190(c.7021G>T), 40469671(c.7502G>A), 40469683(c.7514C>T), 40469723(c.7554G>A), 40470026(c.7857T>C), 40470222(c.8053A>T),
Insertions	-1kb 40436225 (c.-4525_-4524insCT), 40437171 (c.-3579_-3578insC), 40438115 (c.-2635_-2634insT), 40438124 (c.-2627_-2626dupTT), 5'UTR CDS 3'UTR 40462665 (c.502dupT), 40463295 (c.1128_1129insATGTGT), 40463321 (c.1158dupA), 40463329 (c.1161dupA), 40463685 (c.1519dupT), INTRON 40442984 (c.628+226dupG), 40442987 (c.628+226dupG), 40443591 (c.629-737dupT), 40445328 (c.698-753dupC), 40451899 (c.1300+46_1300+47dupAA), 40459749 (c.1301-2011_1301-2010dupTT), 40461091 (c.1301-677_1301-675dupCCC), +1kb 40465925 (c.3756_3757insCTTAATTTA), 40468930 (c.6761_6762insC),
Deletions	-1kb 40437610 (c.-3139delA), 40438081 (c.-2668_-2666delTTA), 40440342 (c.-407_-400delTTTGTTTG), 5'UTR CDS 3'UTR 40462369 (c.202delC), 40462764 (c.599delC), 40465396 (c.3228delA), INTRON 40441174 (c.80-110_80-108delTTC), 40441561 (c.290+60_290+66delAGCCCAG), 40442887 (c.628+127_628+132delTATTAT), 40443262 (c.628+504delC), 40444132 (c.629-196delA), 40448507 (c.986-1564delA), 40448801 (c.986-1267delT), 40452105 (c.1300+246_1300+248delTTA), 40460978 (c.1301-785delG), +1kb 40468385 (c.6217_6220delACCT), 40469479 (c.7311_*7313delTTT),
coding sequence substitutions
premature termination by the nucleotide substitution	0
synonymous num	9
non-synonymous num	7
synonymous substitutions	40441293 (p.Ser27Ser), 40441356 (p.Ser48Ser), 40446626 (p.Asn312Asn), 40450193 (p.Asp368Asp), 40450220 (p.Asn377Asn), 40451751 (p.Ala397Ala), 40451757 (p.Thr399Thr), 40451823 (p.Lys421Lys), 40451848 (p.Leu430Leu),
non-synonymous substitutions	40440763 (p.Gln5Arg), 40440795 (p.Thr16Ala), 40440804 (p.Met19Val), 40446588 (p.Lys300Gln), 40450192 (p.Asp368Gly), 40450215 (p.Arg376Trp), 40462111 (p.Thr549Met),
B6 transcript (ENSMUST00000053043)	MIDRQRMGLWALAILTLPMYLTVTEGSKSSWGLENEALIVRCPQRGRSTYPVEWYYSDTN ESIPTQKRNRIFVSRDRLKFLPARVEDSGIYACVIRSPNLNKTGYLNVTIHKKPPSCNIP DYLMYSTVRGSDKNFKITCPTIDLYNWTAPVQWFKNCKALQEPRFRAHRSYLFIDNVTHD DEGDYTCQFTHAENGTNYIVTATRSFTVEEKGFSMFPVITNPPYNHTMEVEIGKPASIAC SACFGKGSHFLADVLWQINKTVVGNFGEARIQEEEGRNESSSNDMDCLTSVLRITGVTEK DLSLEYDCLALNLHGMIRHTIRLRRKQPIDHRSIYYIVAGCSLLLMFINVLVIVLKVFWI EVALFWRDIVTPYKTRNDGKLYDAYIIYPRVFRGSAAGTHSVEYFVHHTLPDVLENKCGY KLCIYGRDLLPGQDAATVVESSIQNSRRQVFVLAPHMMHSKEFAYEQEIALHSALIQNNS KVILIEMEPLGEASRLQVGDLQDSLQHLVKIQGTIKWREDHVADKQSLSSKFWKHVRYQM PVPERASKTASVAAPLSGKACLDLKHF*
MSMv4 transcript	MIDRRRMGLWALAILALPVYLTVTEGSKSSWGLENEALIVRCPQRGRSTYPVEWYYSDTN ESIPTQKRNRIFVSRDRLKFLPARVEDSGIYACVIRSPNLNKTGYLNVTIHKKPPSCNIP DYLMYSTVRGSDKNFKITCPTIDLYNWTAPVQWFKNCKALQEPRFRAHRSYLFIDNVTHD DEGDYTCQFTHAENGTNYIVTATRSFTVEEKGFSMFPVITNPPYNHTMEVEIGKPASIAC SACFGKGSHFLADVLWQINKTVVGNFGEARIQEEEGRNESSSNDMDCLTSVLRITGVTEQ DLSLEYDCLALNLHGMIRHTIRLRRKQPIDHRSIYYIVAGCSLLLMFINVLVIVLKVFWI EVALFWRGIVTPYKTWNDGKLYDAYIIYPRVFRGSAAGTHSVEYFVHHTLPDVLENKCGY KLCIYGRDLLPGQDAATVVESSIQNSRRQVFVLAPHMMHSKEFAYEQEIALHSALIQNNS KVILIEMEPLGEASRLQVGDLQDSLQHLVKIQGTIKWREDHVADKQSLSSKFWKHVRYQM PVPERASKMASVAAPLSGKACLDLKHF*
homology	98.77 (568 / 568)

Exon Detail Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Il1rl1 (ENSMUSG00000026069)
Transcript ID	ENSMUST00000053043


..........TAAGTTTAGGAATTTCCAGTAAGTGAGACAGCAGCATTTTTGAACAAGTC
ATGGATTTTGGCTAAAACTAAAATTCTATGATGGGCGGGTTAAAAAAAAATGCCAAGACA
TCTGTGTATTTAAAAAGAAAGAGGGAGCATGCCCACGTGGGTCGTCTGCAGAAATGAGAC
GAAGGAGCGCCAAGTAGCCTCACGGCTCTGAGCTTATTCTCTCCAGCCCTTCATCTGGGG
TAAGAATCAATGACTGTCTGAAGCTTGTAAAAGAAAAAAGTGCCTGCAAATCAAAGAAAC
GTGCACTCTTGAAACTACTAAGGAGTTTAATATTTATTCCTAGCTTTGGGGATGTCTGTA
TCCCTCCTCTGACTGGTGAAGGGGAAAGCCACAGTAATAGATTCTTTAAAAGAAAAAGGA
TTATTTATTGTGCACAGACCTCTGGCAAGCCTCCGTGGCTTTTGAGAACAAGCCTAGGCA
GTTACTATTCTTTGAAAGTTTGGGGGAACAGTCTTGGATGGCCTCCTGGCTAATGTTTTA
GTTCAAATTTTTCCTTCCTTAGTTTTTTATAATGATGCCTATCTGTGAGTACTGGCATGT
TGCTCTAGCCTGCTACACGGCTGTGGCTTTGATTGACACTGTGCTTTCTAGTATCTACTC
AATTTTATGGTTCTAAGTTTTACAAATGCAAAAATTTGTTTCCTTTCCTCTTAATTTAGT
TTTTTTTTGTTTGTTTTTTGTTTTTTGTTTTTTATTTTTTTTGAGGAAATGTTCAAGAGA
CTGGTAAGGTATAATCAATCATGGAAAAAAAATCTAGTCATTGTAAGGACTGCTCTCTGG
TTTCACGTTCAGTAGGGATGGATGCAATATTGTATACCTGAAACCTACTATTATCCATAT
GTGAATTTAATAAATACGTGTCAACCGACTGTCCTGTATGGTAAGGACAAATCAAGACAA
GTAAGTAAAAAGTGATACAAATTAATTATTTTACATGGTTTATTTTTCAG
TATCTATAGTGATTTCTCTTCTGGACCCTACCTCAGAGAGCACTCATCAAACGCCTAGTGAACACACCATTACTATCCTGTGCCATTGCCATAGAGGGACCTCAGCCATCAATCACTAGAACATGATTGACAGACGGAGAATGGGACTTTGGGCTTTGGCAATTCTGGCACTTCCCGTGTATTTGACAGTTACGGAGGGCA
GTAAGTACCGATTCTCAGATGAGTG..........TCATGTTCATACCTTTGACTTGTAG
GCAAATCGTCCTGGGGTCTGGAAAATGAGGCTTTAATTGTGAGATGCCCCCAAAGAGGACGCTCAACTTATCCTGTGGAATGGTATTACTCAGATACAAATGAAAGTATTCCTACTCAAAAAAGAAATCGGATCTTTGTCTCAAGAGATCGTCTGAAGTTTCTACCAGCCAGAGTGGAAGACTCTGGGATTTATGCTTGTGTTATCAGAAG
GTACTGTTCGGGAAACCATTGTAAG..........TTAAATCTTTGGCTTCTTTTAATAG
CCCCAACTTGAATAAGACTGGATACTTGAATGTCACCATACATAAAAAGCCGCCAAGCTGCAATATCCCTGATTATTTGATGTACTCGACAGTACGTGGATCAGATAAAAATTTCAAGATAACGTGTCCAACAATTGACCTGTATAATTGGACAGCACCTGTTCAGTGGTTTAAG
GTAAACGTTTGAAATCTGGGGAGAA..........CTTGTTGTTGTTGTTGTTGCTTCAG
AACTGCAAAGCTCTCCAAGAGCCAAGGTTCAGGGCACACAGGTCCTACTTGTTCATTGACAACGTGACTCATGATGATGAAGGTGACTACACTTGTCAATTCACACACGCGGAGAATGGAACCAACTACATCGTGACGGCCACCAGATCATTCACAGTTGAAG
GTAAGCTCTTGGCTTCAACAAGGGA..........TCTATTTCTGTTTTTAATTTTTAAG
AAAAAGGCTTTTCTATGTTTCCAGTAATTACAAATCCTCCATACAACCACACAATGGAAGTGGAAATAG
GTAAGAAAATTTAAACTACTCTCTG..........TGAATCTCTTCACTTTTTTATCTAG
GAAAACCAGCAAGTATTGCCTGTTCAGCTTGCTTTGGCAAAGGCTCTCACTTCTTGGCTGATGTCCTGTGGCAGATTAACAAAACAGTAGTTGGAAATTTTGGTGAAGCAAGAATTCAAGAAGAGGAAGGTCGAAATGAAAG
GCATGTCATCTATCATATCTATCTA..........CATTAGTAACATGTTGCTTTCTCAG
TTCCAGCAATGACATGGATTGTTTAACCTCAGTGTTAAGGATAACTGGTGTGACAGAACAGGACCTGTCCCTGGAATATGACTGTCTGGCCCTGAATCTTCATGGCATGATAAGGCACACCATAAGGCTGAGAAGGAAACAACCAA
GTAAGGAGTGTCCCTCACACATTGC..........CCCCCATCTTCCCATCTCTTGATAG
TTGATCACCGAAGCATCTACTACATAGTTGCTGGATGTAGTTTATTGCTAATGTTTATCAATGTCTTGGTGATAGTCTTAAAAGTGTTCTGGATTGAGGTTGCTCTGTTCTGGAGAGGCATAGTGACACCTTACAAAACCTGGAATG
GTGAGTATCTGTTTTCAAGATTCTC..........CGGTACTTCTTGATTTCCTTCTCAG
ATGGCAAGCTCTACGATGCGTACATCATTTACCCTCGGGTCTTCCGGGGCAGCGCGGCAGGAACTCACTCTGTGGAGTACTTTGTTCACCACACTCTGCCCGACGTTCTTGAAAATAAATGTGGCTACAAGTTGTGCATTTATGGGAGAGACCTGCTACCTGGGCAAG
GTAAACCGACTGAGACACATCAGGG..........GTCTCCATCCATCTCTTGACTGTAG
ATGCAGCCACCGTGGTGGAAAGCAGTATCCAGAATAGCAGAAGACAGGTGTTTGTTCTGGCCCCTCACATGATGCACAGCAAGGAATTTGCCTACGAGCAGGAGATTGCTCTGCACAGCGCCCTCATCCAGAACAACTCCAAGGTGATTCTTATTGAAATGGAGCCTCTGGGTGAGGCAAGCCGACTACAGGTTGGGGACCTGCAAGATTCTCTCCAGCATCTTGTGAAAATTCAGGGGACCATCAAGTGGAGGGAAGATCATGTGGCCGACAAGCAGTCTCTAAGTTCCAAATTCTGGAAGCATGTGAGGTACCAAATGCCAGTGCCAGAAAGAGCCTCCAAGATGGCATCTGTTGCGGCTCCGTTGAGTGGCAAGGCATGCTTAGACCTGAAACACTTTTGAGTTGAGAGCTGCGGAGTCCCAGCAGTAGGCACCGGAGTGCAGGTGTGAAGACTTGAAATGCTAAGGGTGGGGGCTCCAAGTCTCAGCTAAAGAGCAACTCTAGTTTATTTTCCTGGTTATGGTAGGAGCCACCCATCGTTTGTTTCCGGTTTCCTTTTCCTACTTCACTCTTGTGGCACAAGATCAACCCTGAGCTTTTTCCTTTTCTTTTATTTCTCTTTTTGTTCCTTCTTTTAAAAGCTTTTTAAAATTGATTATCTTATTTATCTACCTTTCAAAGGTTATCCCCCTTCCCGGTGCCCCCTCTACAAATCCCCATCCTGCTTCCCTCCTCCCTGCTTCTATGAGGGTGCCCCCCCACCTGCCCATCCACTCCAGCCTTACAGGCCTTGTGTTCCCCTATGCTGGGGCATCGAGCCTCCATAAGACCTCCCCTCTCATTCATCAATTATCTACATTCTGAATATCAAGCCGACACTTTTGTTTTTGTTTTTGATTTTTTGAGACAGGGTTTCTCTGTGTAGCCCTGGCTGTCCTGAAACTCACATTGTAGACCAGGCTGGCCTCGAACTCAGAAATCAGCCTGCCTCTGCCTCCCCGAGTGCTGGGATTAAAGGCGTGCGCCACCACGCCGGGCTAAGCCTACACTTTCAGAATAAAGTTCTGATTCACCTCAAAGAGTAGTCTCATTCCCAGAGGCAGAGAGCCGGAAAGAGCCTCCAATGTGCTTGTCCAGGCAGAGCTGACCTTATTTGCTTACCAGTCACAGGTAAACAAAGCGTTTCTCCGTGTTGCCTCTTGTAGATATCCCTGTATTAGATTAGGAAGGGAATGAGCCGTCCTACTGACCAGTTTGTGAATTGTGGTAGAAAAAGCGTTGAAGTTTGTTAAATGCTTGTTAGCAATGTAAACCTCATTCCTAACACACCAGAATTTCTTACTTTTTATTCGTCAATTACCGAGTTTTGTCAAGTCAGTATTAACAGATTTGGTCTAATACCTTACCCAAATTGCTATTACAGTCGAGCATGTTTTCAGTTCTAAATGCCTTTTATATATTTTTTATTCTTCTTAGAAATACTTCCTCACTTTAAAAGTAATGTAAAGATGTATTAGAAAACATAAGGTGTAAGAGAAAGTATGATAAAATATAAAAAATAATAGAAAGGAAAGGAAATATAATGAAAATCATAACTCTTAAGATTAATTTTGGTAGGTCTGTATTTTAAAATATAATTAAATTTTATACCGATAACTTTTATAGCTGAGATTGTACACTACAGACTAGGCAGCTTTTCCTATTTACCACCATAATGAAAACTGGTGGCTGATTTCTTTAACATTCACAGAAGTTTCAAATGTCTCATTTTAGACTGTGCTGCAGACTATGGCTGAAGCAGCCAGAATGAGAAACAGGTCTGCCATGTCACATCGGGACATTTTCCTACTTACTGAAATGTATCTGTCACTGTGCGACAGCTAACTTTTGTGATACTCCTTTGAAATGTGTAGGGAATTTGGACAGAACAGAATCAATCTATAGTCAGAGGTCCTCTGGACAGTCTTTTCCAGGAGCACACACAGACCGTGAGGTCCTAGGCATCCAGGAAATGGATCCAGAGCCCAGGCAAGTGTCTTACAGGTACCTTGAATTTTGCCAATAGATATGAGCCCTGCCTTAGCTGAGTTGCTCAGTCGGTGATGGGACTCCAGGCTGAGGTGACAATGAACACAGAATTTGGGAGACTCTTGAAAGGAGGGGAATGTTGAACTCACGGTCAACATATGAGGCTGCAGAGAAGCCATATGCAGAAGTGTGTGTAGAGGATCTAGAGTAGCCCGTTTCTCTGGGGACAGTGTGCTCTTAGTCTGTACCCTTAGGCTGGGTTGCCAGGTAAACATTTGCTAGTGTTCAGTTCAAAGGCTGAAGCTTGAGCTGAGGGTGATGAGGAATTCAAACTTCCCCTCGCATGCATCCACCCTGTGGTTGCCTGGTTTGCTAAATCCACCTGCTCCGCTGTAGTAGAAGGTTTTGATCTTCTGCAGCTTCATCTACTTCTTAGTGAGTTGCCAAAACTGACCACTGAAAAGCATGCTGTGTACATAACTGTCTCGTGTCCCAGAACGTGCAATCAGGAGGAAGTCCTCACTCCCGATAACGGAATCCTTGCTCTGTGGCTGTGAGGACGTCCCTTAGCAACCTCAGATAGTAATTTTTCTTAGGTGGGATGGAACATAGTAACGTGCTGGATTCTTTGCTAACTGAAAATAGAAGTATTCGGATTTCAGAAAGAACTGGATAAATATTAATGTTGGTGATTATGAAATCTCATTGTGAGCCGTGTGAGTTTGAGTGTGTATTCTGTGATTGTGCTGAATGAAGACCTCTAAAAATGAAATTCTCTCCAATCTCATCCCTGGGAATAGTTGCTTCCTCATGCCTGCTGCTCCATCCATGGAAAATGACTAAAGAGAATTATTATTTGTTCCCGAGATTCTTCTGATAAGTCTAAACTATTTGCATGTAATTGAGCTGGGCAGCATGGTGCACTTGGGAGGCAGAGGCAGGTGGATCTCTGTGAGTTTGAGGCCAGCCTGCTCTACAGAGTTAGTTCCAGGACACCAGAGCTACAAAAAGAAAACCTGTCCTAACAACAACAGCAACAGCTGCAGCAGCAACAACAACAACAAAGAAAAAGAAGAGGAGGAGGAGGAAAGGAAAGAAGGAAGAAGGAAGAAGAAAGGGAAGAAATAATAGATTTTTCTGTAATGAACACACATATGCTTTGATGCTTTTGCTAAACTCAAAATATTAGTTTTATTTTACTGTTTTGAAAGGTTCAAAGCATGATCCATGTAAAAATGTCTTCTGTGGGGCTTTCTCCCATTTCTACTTTTGTTCCCCTCATTTCTTCAAAGTGCTTGTCCAGGCAGAGCTGACCTTATTTGCTTACCAGTCACAGGTAAACAAAGCGTTTCTTCGTGTTGCCTCTTGTAGCCATCCCTGTATTAGATTAGGAAGGGAACGAGCCGTCCTACTGTCCAGTTTGTGAGTTGTGGTAGAAAGAGTGTTGAAGTTTGTTAAATGCTTGTTTTCCATGTATCAAAATGTTATGCCTTTCCTATTTATTATTGTATGGCAAATTATTTTTCACTGGGCAAAAATAATTGTGCCATTGACTCCTTGTGTGTTTTCTTCATGTGTGTTTGAAGAGTTCTAGCTTATT
AAAAAAAAAAATCTAGAAATACTGTTTGGCCTTCGTTTCTTTTGAACAGTTTAAAATCTC
ACTATAACTTCCCAATTGTGGCTTTCCACCCATCCAGGAGGCTGGGCATCCTGCGCTGGC
TGGCACTATGTTGGCTCTGCGAGCCTGGCAGTCTCAAGGACTCTCCTGCCGCAGTGCAGG
AGTCCTGGGTTCTCAGCGCCCTCTGCCTGAAGGGTGTGGCGCGCACAGGGCACACAGGTG
GTTCTTGTGGTTGAGTAGACAGGCTGCAGGTTCCCGGAAGCCAAAGGCGGCGGCTGTGCC
TCCCTGGAGGTCTGGCGGAGGAGTCAGCTGAGATCCAGGCAGGAGAACTCCAGGGGCTCT
ATCGCCTCAGCGGTGGGGGGTCGGGGTTAGTTCTGGGAACCGTGGAGCTCTTAGGTGAGC
AGGGACATGCAGAGAAACCCTGCCAGGAGTACAGGTCTTCCCAGAACTGAAAGCTTGAGC
GCTCCTGGGTGGAGCAGCCTGTAGCACCCTAGGCTTCAGTCCCCCAGCTCTTAGGAGCTC
CTCCCATCCCAGGCGGTGCCCACCTGAAACCTTAGCTTTTCCTTTCTTCTTCTTATTCTG
ATCTTCCTCTCCCAGCCCTCCACCTCCCTACCCCCGGTCGTTGGCTTCTTCTTCTTCTTC
TTCTTTTTTTTTTTTCCTGCGATAATTCTCTGGTTTGCCCAATCTCTCTAATCAAGCTCC
TGGCCTTGCCTCACTGCGCCTTCCCTCCCTGTCTGTTGTCACAGTTGTGGACCAGGAGGT
ATTTAGTCTCACTTGCTGGGCGAATCCTGCTTCACAGATGTAAGTGAAGGAGAAGCCACT
GCCCAGGCCTGTGTGAGGGCCACCTCTCTGAAGGTAAGGGCAGACTCTGATGTCCAGTCC
TCACTGTCTTCTGCTGTCTGGAGCAAGGAGAGGAACCACCCACAACGATCCTGAAAACAA
GGTCAATTGTGAGTGGTGTGTATGTGTGTGTGTGTGTGTG..........

No.	Exon / Intron	Start	End	Start Phase	End Phase	Length	Sequence
	5' upstream sequence						..........TAAGTTTAGGAATTTCCAGTAAGTGAGACAGCAGCATTTTTGAACAAGTC ATGGATTTTGGCTAAAACTAAAATTCTATGATGGGCGGGTTAAAAAAAAATGCCAAGACA TCTGTGTATTTAAAAAGAAAGAGGGAGCATGCCCACGTGGGTCGTCTGCAGAAATGAGAC GAAGGAGCGCCAAGTAGCCTCACGGCTCTGAGCTTATTCTCTCCAGCCCTTCATCTGGGG TAAGAATCAATGACTGTCTGAAGCTTGTAAAAGAAAAAAGTGCCTGCAAATCAAAGAAAC GTGCACTCTTGAAACTACTAAGGAGTTTAATATTTATTCCTAGCTTTGGGGATGTCTGTA TCCCTCCTCTGACTGGTGAAGGGGAAAGCCACAGTAATAGATTCTTTAAAAGAAAAAGGA TTATTTATTGTGCACAGACCTCTGGCAAGCCTCCGTGGCTTTTGAGAACAAGCCTAGGCA GTTACTATTCTTTGAAAGTTTGGGGGAACAGTCTTGGATGGCCTCCTGGCTAATGTTTTA GTTCAAATTTTTCCTTCCTTAGTTTTTTATAATGATGCCTATCTGTGAGTACTGGCATGT TGCTCTAGCCTGCTACACGGCTGTGGCTTTGATTGACACTGTGCTTTCTAGTATCTACTC AATTTTATGGTTCTAAGTTTTACAAATGCAAAAATTTGTTTCCTTTCCTCTTAATTTAGT TTTTTTTTGTTTGTTTTTTGTTTTTTGTTTTTTATTTTTTTTGAGGAAATGTTCAAGAGA CTGGTAAGGTATAATCAATCATGGAAAAAAAATCTAGTCATTGTAAGGACTGCTCTCTGG TTTCACGTTCAGTAGGGATGGATGCAATATTGTATACCTGAAACCTACTATTATCCATAT GTGAATTTAATAAATACGTGTCAACCGACTGTCCTGTATGGTAAGGACAAATCAAGACAA GTAAGTAAAAAGTGATACAAATTAATTATTTTACATGGTTTATTTTTCAG
1	EXON 1	40,440,628	40,440,828	-	1	201	TATCTATAGTGATTTCTCTTCTGGACCCTACCTCAGAGAGCACTCATCAAACGCCTAGTG AACACACCATTACTATCCTGTGCCATTGCCATAGAGGGACCTCAGCCATCAATCACTAGA ACATGATTGACAGACGGAGAATGGGACTTTGGGCTTTGGCAATTCTGGCACTTCCCGTGT ATTTGACAGTTACGGAGGGCA
	INTRON 1 - 2	40,440,829	40,441,291			463	GTAAGTACCGATTCTCAGATGAGTG..........TCATGTTCATACCTTTGACTTGTAG
2	EXON 2	40,441,292	40,441,502	1	2	211	GCAAATCGTCCTGGGGTCTGGAAAATGAGGCTTTAATTGTGAGATGCCCCCAAAGAGGAC GCTCAACTTATCCTGTGGAATGGTATTACTCAGATACAAATGAAAGTATTCCTACTCAAA AAAGAAATCGGATCTTTGTCTCAAGAGATCGTCTGAAGTTTCTACCAGCCAGAGTGGAAG ACTCTGGGATTTATGCTTGTGTTATCAGAAG
	INTRON 2 - 3	40,441,503	40,442,305			803	GTACTGTTCGGGAAACCATTGTAAG..........TTAAATCTTTGGCTTCTTTTAATAG
3	EXON 3	40,442,306	40,442,480	2	0	175	CCCCAACTTGAATAAGACTGGATACTTGAATGTCACCATACATAAAAAGCCGCCAAGCTG CAATATCCCTGATTATTTGATGTACTCGACAGTACGTGGATCAGATAAAAATTTCAAGAT AACGTGTCCAACAATTGACCTGTATAATTGGACAGCACCTGTTCAGTGGTTTAAG
	INTRON 3 - 4	40,442,481	40,442,598			118	GTAAACGTTTGAAATCTGGGGAGAA..........CTTGTTGTTGTTGTTGTTGCTTCAG
4	EXON 4	40,442,599	40,442,761	0	1	163	AACTGCAAAGCTCTCCAAGAGCCAAGGTTCAGGGCACACAGGTCCTACTTGTTCATTGAC AACGTGACTCATGATGATGAAGGTGACTACACTTGTCAATTCACACACGCGGAGAATGGA ACCAACTACATCGTGACGGCCACCAGATCATTCACAGTTGAAG
	INTRON 4 - 5	40,442,762	40,444,333			1,572	GTAAGCTCTTGGCTTCAACAAGGGA..........TCTATTTCTGTTTTTAATTTTTAAG
5	EXON 5	40,444,334	40,444,402	1	1	69	AAAAAGGCTTTTCTATGTTTCCAGTAATTACAAATCCTCCATACAACCACACAATGGAAG TGGAAATAG
	INTRON 5 - 6	40,444,403	40,446,086			1,684	GTAAGAAAATTTAAACTACTCTCTG..........TGAATCTCTTCACTTTTTTATCTAG
6	EXON 6	40,446,087	40,446,228	1	2	142	GAAAACCAGCAAGTATTGCCTGTTCAGCTTGCTTTGGCAAAGGCTCTCACTTCTTGGCTG ATGTCCTGTGGCAGATTAACAAAACAGTAGTTGGAAATTTTGGTGAAGCAAGAATTCAAG AAGAGGAAGGTCGAAATGAAAG
	INTRON 6 - 7	40,446,229	40,446,529			301	GCATGTCATCTATCATATCTATCTA..........CATTAGTAACATGTTGCTTTCTCAG
7	EXON 7	40,446,530	40,446,675	2	1	146	TTCCAGCAATGACATGGATTGTTTAACCTCAGTGTTAAGGATAACTGGTGTGACAGAACA GGACCTGTCCCTGGAATATGACTGTCTGGCCCTGAATCTTCATGGCATGATAAGGCACAC CATAAGGCTGAGAAGGAAACAACCAA
	INTRON 7 - 8	40,446,676	40,450,074			3,399	GTAAGGAGTGTCCCTCACACATTGC..........CCCCCATCTTCCCATCTCTTGATAG
8	EXON 8	40,450,075	40,450,221	1	1	147	TTGATCACCGAAGCATCTACTACATAGTTGCTGGATGTAGTTTATTGCTAATGTTTATCA ATGTCTTGGTGATAGTCTTAAAAGTGTTCTGGATTGAGGTTGCTCTGTTCTGGAGAGGCA TAGTGACACCTTACAAAACCTGGAATG
	INTRON 8 - 9	40,450,222	40,451,692			1,471	GTGAGTATCTGTTTTCAAGATTCTC..........CGGTACTTCTTGATTTCCTTCTCAG
9	EXON 9	40,451,693	40,451,860	1	1	168	ATGGCAAGCTCTACGATGCGTACATCATTTACCCTCGGGTCTTCCGGGGCAGCGCGGCAG GAACTCACTCTGTGGAGTACTTTGTTCACCACACTCTGCCCGACGTTCTTGAAAATAAAT GTGGCTACAAGTTGTGCATTTATGGGAGAGACCTGCTACCTGGGCAAG
	INTRON 9 - 10	40,451,861	40,461,765			9,905	GTAAACCGACTGAGACACATCAGGG..........GTCTCCATCCATCTCTTGACTGTAG
10	EXON 10	40,461,766	40,465,396	1	-	3,631	ATGCAGCCACCGTGGTGGAAAGCAGTATCCAGAATAGCAGAAGACAGGTGTTTGTTCTGG CCCCTCACATGATGCACAGCAAGGAATTTGCCTACGAGCAGGAGATTGCTCTGCACAGCG CCCTCATCCAGAACAACTCCAAGGTGATTCTTATTGAAATGGAGCCTCTGGGTGAGGCAA GCCGACTACAGGTTGGGGACCTGCAAGATTCTCTCCAGCATCTTGTGAAAATTCAGGGGA CCATCAAGTGGAGGGAAGATCATGTGGCCGACAAGCAGTCTCTAAGTTCCAAATTCTGGA AGCATGTGAGGTACCAAATGCCAGTGCCAGAAAGAGCCTCCAAGATGGCATCTGTTGCGG CTCCGTTGAGTGGCAAGGCATGCTTAGACCTGAAACACTTTTGAGTTGAGAGCTGCGGAG TCCCAGCAGTAGGCACCGGAGTGCAGGTGTGAAGACTTGAAATGCTAAGGGTGGGGGCTC CAAGTCTCAGCTAAAGAGCAACTCTAGTTTATTTTCCTGGTTATGGTAGGAGCCACCCAT CGTTTGTTTCCGGTTTCCTTTTCCTACTTCACTCTTGTGGCACAAGATCAACCCTGAGCT TTTTCCTTTTCTTTTATTTCTCTTTTTGTTCCTTCTTTTAAAAGCTTTTTAAAATTGATT ATCTTATTTATCTACCTTTCAAAGGTTATCCCCCTTCCCGGTGCCCCCTCTACAAATCCC CATCCTGCTTCCCTCCTCCCTGCTTCTATGAGGGTGCCCCCCCACCTGCCCATCCACTCC AGCCTTACAGGCCTTGTGTTCCCCTATGCTGGGGCATCGAGCCTCCATAAGACCTCCCCT CTCATTCATCAATTATCTACATTCTGAATATCAAGCCGACACTTTTGTTTTTGTTTTTGA TTTTTTGAGACAGGGTTTCTCTGTGTAGCCCTGGCTGTCCTGAAACTCACATTGTAGACC AGGCTGGCCTCGAACTCAGAAATCAGCCTGCCTCTGCCTCCCCGAGTGCTGGGATTAAAG GCGTGCGCCACCACGCCGGGCTAAGCCTACACTTTCAGAATAAAGTTCTGATTCACCTCA AAGAGTAGTCTCATTCCCAGAGGCAGAGAGCCGGAAAGAGCCTCCAATGTGCTTGTCCAG GCAGAGCTGACCTTATTTGCTTACCAGTCACAGGTAAACAAAGCGTTTCTCCGTGTTGCC TCTTGTAGATATCCCTGTATTAGATTAGGAAGGGAATGAGCCGTCCTACTGACCAGTTTG TGAATTGTGGTAGAAAAAGCGTTGAAGTTTGTTAAATGCTTGTTAGCAATGTAAACCTCA TTCCTAACACACCAGAATTTCTTACTTTTTATTCGTCAATTACCGAGTTTTGTCAAGTCA GTATTAACAGATTTGGTCTAATACCTTACCCAAATTGCTATTACAGTCGAGCATGTTTTC AGTTCTAAATGCCTTTTATATATTTTTTATTCTTCTTAGAAATACTTCCTCACTTTAAAA GTAATGTAAAGATGTATTAGAAAACATAAGGTGTAAGAGAAAGTATGATAAAATATAAAA AATAATAGAAAGGAAAGGAAATATAATGAAAATCATAACTCTTAAGATTAATTTTGGTAG GTCTGTATTTTAAAATATAATTAAATTTTATACCGATAACTTTTATAGCTGAGATTGTAC ACTACAGACTAGGCAGCTTTTCCTATTTACCACCATAATGAAAACTGGTGGCTGATTTCT TTAACATTCACAGAAGTTTCAAATGTCTCATTTTAGACTGTGCTGCAGACTATGGCTGAA GCAGCCAGAATGAGAAACAGGTCTGCCATGTCACATCGGGACATTTTCCTACTTACTGAA ATGTATCTGTCACTGTGCGACAGCTAACTTTTGTGATACTCCTTTGAAATGTGTAGGGAA TTTGGACAGAACAGAATCAATCTATAGTCAGAGGTCCTCTGGACAGTCTTTTCCAGGAGC ACACACAGACCGTGAGGTCCTAGGCATCCAGGAAATGGATCCAGAGCCCAGGCAAGTGTC TTACAGGTACCTTGAATTTTGCCAATAGATATGAGCCCTGCCTTAGCTGAGTTGCTCAGT CGGTGATGGGACTCCAGGCTGAGGTGACAATGAACACAGAATTTGGGAGACTCTTGAAAG GAGGGGAATGTTGAACTCACGGTCAACATATGAGGCTGCAGAGAAGCCATATGCAGAAGT GTGTGTAGAGGATCTAGAGTAGCCCGTTTCTCTGGGGACAGTGTGCTCTTAGTCTGTACC CTTAGGCTGGGTTGCCAGGTAAACATTTGCTAGTGTTCAGTTCAAAGGCTGAAGCTTGAG CTGAGGGTGATGAGGAATTCAAACTTCCCCTCGCATGCATCCACCCTGTGGTTGCCTGGT TTGCTAAATCCACCTGCTCCGCTGTAGTAGAAGGTTTTGATCTTCTGCAGCTTCATCTAC TTCTTAGTGAGTTGCCAAAACTGACCACTGAAAAGCATGCTGTGTACATAACTGTCTCGT GTCCCAGAACGTGCAATCAGGAGGAAGTCCTCACTCCCGATAACGGAATCCTTGCTCTGT GGCTGTGAGGACGTCCCTTAGCAACCTCAGATAGTAATTTTTCTTAGGTGGGATGGAACA TAGTAACGTGCTGGATTCTTTGCTAACTGAAAATAGAAGTATTCGGATTTCAGAAAGAAC TGGATAAATATTAATGTTGGTGATTATGAAATCTCATTGTGAGCCGTGTGAGTTTGAGTG TGTATTCTGTGATTGTGCTGAATGAAGACCTCTAAAAATGAAATTCTCTCCAATCTCATC CCTGGGAATAGTTGCTTCCTCATGCCTGCTGCTCCATCCATGGAAAATGACTAAAGAGAA TTATTATTTGTTCCCGAGATTCTTCTGATAAGTCTAAACTATTTGCATGTAATTGAGCTG GGCAGCATGGTGCACTTGGGAGGCAGAGGCAGGTGGATCTCTGTGAGTTTGAGGCCAGCC TGCTCTACAGAGTTAGTTCCAGGACACCAGAGCTACAAAAAGAAAACCTGTCCTAACAAC AACAGCAACAGCTGCAGCAGCAACAACAACAACAAAGAAAAAGAAGAGGAGGAGGAGGAA AGGAAAGAAGGAAGAAGGAAGAAGAAAGGGAAGAAATAATAGATTTTTCTGTAATGAACA CACATATGCTTTGATGCTTTTGCTAAACTCAAAATATTAGTTTTATTTTACTGTTTTGAA AGGTTCAAAGCATGATCCATGTAAAAATGTCTTCTGTGGGGCTTTCTCCCATTTCTACTT TTGTTCCCCTCATTTCTTCAAAGTGCTTGTCCAGGCAGAGCTGACCTTATTTGCTTACCA GTCACAGGTAAACAAAGCGTTTCTTCGTGTTGCCTCTTGTAGCCATCCCTGTATTAGATT AGGAAGGGAACGAGCCGTCCTACTGTCCAGTTTGTGAGTTGTGGTAGAAAGAGTGTTGAA GTTTGTTAAATGCTTGTTTTCCATGTATCAAAATGTTATGCCTTTCCTATTTATTATTGT ATGGCAAATTATTTTTCACTGGGCAAAAATAATTGTGCCATTGACTCCTTGTGTGTTTTC TTCATGTGTGTTTGAAGAGTTCTAGCTTATT
	3' upstream sequence						AAAAAAAAAAATCTAGAAATACTGTTTGGCCTTCGTTTCTTTTGAACAGTTTAAAATCTC ACTATAACTTCCCAATTGTGGCTTTCCACCCATCCAGGAGGCTGGGCATCCTGCGCTGGC TGGCACTATGTTGGCTCTGCGAGCCTGGCAGTCTCAAGGACTCTCCTGCCGCAGTGCAGG AGTCCTGGGTTCTCAGCGCCCTCTGCCTGAAGGGTGTGGCGCGCACAGGGCACACAGGTG GTTCTTGTGGTTGAGTAGACAGGCTGCAGGTTCCCGGAAGCCAAAGGCGGCGGCTGTGCC TCCCTGGAGGTCTGGCGGAGGAGTCAGCTGAGATCCAGGCAGGAGAACTCCAGGGGCTCT ATCGCCTCAGCGGTGGGGGGTCGGGGTTAGTTCTGGGAACCGTGGAGCTCTTAGGTGAGC AGGGACATGCAGAGAAACCCTGCCAGGAGTACAGGTCTTCCCAGAACTGAAAGCTTGAGC GCTCCTGGGTGGAGCAGCCTGTAGCACCCTAGGCTTCAGTCCCCCAGCTCTTAGGAGCTC CTCCCATCCCAGGCGGTGCCCACCTGAAACCTTAGCTTTTCCTTTCTTCTTCTTATTCTG ATCTTCCTCTCCCAGCCCTCCACCTCCCTACCCCCGGTCGTTGGCTTCTTCTTCTTCTTC TTCTTTTTTTTTTTTCCTGCGATAATTCTCTGGTTTGCCCAATCTCTCTAATCAAGCTCC TGGCCTTGCCTCACTGCGCCTTCCCTCCCTGTCTGTTGTCACAGTTGTGGACCAGGAGGT ATTTAGTCTCACTTGCTGGGCGAATCCTGCTTCACAGATGTAAGTGAAGGAGAAGCCACT GCCCAGGCCTGTGTGAGGGCCACCTCTCTGAAGGTAAGGGCAGACTCTGATGTCCAGTCC TCACTGTCTTCTGCTGTCTGGAGCAAGGAGAGGAACCACCCACAACGATCCTGAAAACAA GGTCAATTGTGAGTGGTGTGTATGTGTGTGTGTGTGTGTG..........

Sequence Detail Report

Gene Symbol (Gene ID)	Il1rl1 (ENSMUSG00000026069)
Transcript ID	ENSMUST00000053043

		SNP Information
Strain :
Sequence Retrieve :
Exon translate : CDS Start ( 1 ) - End ( 568 ) -
Strand :	forward reverse
Show sequence :	nucleotide amino acid
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