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Target CDS Information

Gene Symbol (Gene ID) Kif13a (ENSMUSG00000021375)
Cross Reference
CCDS CCDS36652.1
EMBL AC124598, AC134913
GO GO:0000910, GO:0003777, GO:0005524, ...show all
goslim_goa GO:0003674, GO:0005575, GO:0005622, ...show all
MGI_trans_name Kif13a-201
Reactome R-MMU-390466, R-MMU-390471, R-MMU-391251, ...show all
RefSeq_mRNA NM_010617.2
RefSeq_peptide NP_034747
RefSeq_peptide_predicted XP_011242677.1, XP_011242678.1
UCSC uc007qhn.1
UniParc UPI0000EC96CF
Uniprot/SPTREMBL F8VQ75
Definition protein_id:ENSMUSP00000055304
translation:
MSDTKVKVAVRVRPMNRRELELNTKCVVEMEGNQTVLHPPPSNTKQGERKPPKVFAFDYC
FWSMDESNTTKYAGQEVVFKCLGEGILEKAFQGYNACIFAYGQTGSGKSFSMMGHAEQLG
LIPRLCCALFQRIALEQNESQTFKVEVSYMEIYNEKVRDLLDPKGSRQSLKVREHKVLGP
YVDGLSQLAVTSFEDIESLMSEGNKSRTVAATNMNEESSRSHAVFNIIITQTLYDLQSGN
SGEKVSKVSLVDLAGSERVSKTGAAGERLKEGSNINKSLTTLGLVISSLADQAAGKGKNK
FVPYRDSVLTWLLKDNLGGNSQTSMIATISPAADNYEETLSTLRYADRAKRIVNHAVVNE
DPNAKVIRELREEVEKLREQLSQAEAMKAPELKEKLEESEKLIKELTVTWEEKLRKTEAI
AQERQRQLESMGISLETSGIKVGDDKCYLVNLNADPALNELLVYYLKDHTRVGADTSQDI
QLFGIGIQPEHCEIDIAADGDITLTPKENARSCVNGTLVCSTTQLWHGDRILWGNNHFFR
INLPKRKRRDWLKDFERETSSAEHDLDAASEASSEPDYNYEFAQMEVIMKTLNSNDPVQN
VVQVLEKQYLEEKRTALEEQRLMYERELEQLRQQLSPERQPPSSASDRLAYSSQTAQQKV
TQWAEERDELFRQSLAKLREQLVKANTLVREANFLAEEMSKLTDYQVTLQIPAANLSANR
KRGAIVSEPAIQARRKGKGTQVWTIEKLENKLIDMRDLYQEWKENVPEAKRLYGKRGDPF
YEAQENHNLIGVANVFLECLFCDVKLQYAVPIISQQGEVAGRLHVEVTRITGTIPERMAE
DDSSENSSESGSLEVVDSSGEVIHRVKKLTCRVIIKEATGLPISLSNFVFCQYTFWDQCE
STVAAPVVDPDVPSPQSKDAQYTVTFSHCKDYVVTVTEEFLEFISDGALAIEVWGHRCAG
NGSPIWEVDSLHAKTRTLHDRWNEVTRRIEVWISILELNELGDYAAVELHQAKDVNTGGV
FQLRQGHSRRVQVTVKPVQHSGTLPLMVEAILSVSIGCVTARSTKLQRGLDSYQEEDLNC
VRERWSDALIKRREYLDEQIKKVSNKKEKTEDDMEREARLVEQWVGLTEERNAVLVPAPG
SGIPGAPADWVPPPGMETHIPVLFLDLNADDLSANEQLVGPHASGVNSILPKEHGSQFFY
LPIIKHSDDEVSATASWDSSVHDSLHLNRVTPQNERIYLIVKTTVQLSHPAAMELVLRKR
IAANIYNKQSFTQSLKRRISLINICYSCGVTYEIVSNIPKATEEIEDRETLALLAARSEN
EGTLDGETYIEKYTRGVLQVENILSLERLRQAVTVKEALSTKARHIRRSLSTPNVHNVSS
SRPDLSGFDEDDKGWPENQLDVSDYSSSYQDVACYGTLPRDSPRRSKEGCPSENPHALTV
SPFKAFSPQPPKFFKPLMPVKEEHKKRLALEARPLLSQEDSEEEENELEALSRKLMLTQP
YVPVEFADFSVYNASLENREWSSSKADLTDSRALEKAVSRSPTTSSLTSGYFSHSASNAT
LSDMAVPSSDSSDQLAVSTKEVECAEPPGPSLAPDVRPASNQELTEVGRGSGKDETIAVP
LEENSALPKGTPSPQSIPEESSRMPCRTASCSELDVGPSKDGHQAREFCPGEVTIEHTTN
ILEDHSFTEFMGVSDGKDFDGLADCSVGEPSRRRALTNETDHKGIPERPPDADRLHPKIE
NDQEATATR

Chromosome 13
Length
Position(start - end)
179,014
46,750,606 - 46,929,621
Orient to Chromosome minus
Link Location : (13:46750606-46929621)
/

Detail Map


 

Report

Polymorphisms Report

Target Strain  MSMv4  JF1v3  KJRv1  SWNv1  CHDv1  NJLv1  BLG2v1  HMIv1  BFMv1  PGN2v1
Gene Symbol (Gene ID) Kif13a (ENSMUSG00000021375)
Transcript ID ENSMUST00000056978
Reports
substitution
cSNPs24
Insertion117
Deletion167
SNPs
+1kb
5'UTR
CDS
3'UTR
INTRON
-1kb
Insertions
+1kb
5'UTR
CDS
3'UTR
INTRON
-1kb
Deletions
+1kb
5'UTR
CDS
3'UTR
INTRON
-1kb
coding sequence substitutions
premature termination by the nucleotide substitution0
synonymous num20
non-synonymous num4
synonymous substitutions 46752231 (p.Val1693Val), 46752867 (p.Ser1481Ser), 46763358 (p.Arg1425Arg), 46763394 (p.Ala1413Ala), 46764633 (p.Arg1382Arg), 46786537 (p.Thr1017Thr), 46788081 (p.Ala973Ala), 46788090 (p.Ser970Ser), 46788144 (p.Glu952Glu), 46793939 (p.Val856Val), 46802605 (p.Pro637Pro), 46810816 (p.His469His), 46814262 (p.Lys388Lys), 46815330 (p.Tyr345Tyr), 46815336 (p.Leu343Leu), 46815357 (p.Tyr336Tyr), 46816350 (p.Ala293Ala), 46824056 (p.Ser241Ser), 46825299 (p.Thr208Thr), 46830817 (p.Val157Val),
non-synonymous substitutions 46750623 (p.Ala1745Thr), 46752527 (p.Asp1595Asn), 46752536 (p.Leu1592Phe), 46809215 (p.Ser521Asn),
B6 transcript
(ENSMUST00000056978)
MSDTKVKVAVRVRPMNRRELELNTKCVVEMEGNQTVLHPPPSNTKQGERKPPKVFAFDYC
FWSMDESNTTKYAGQEVVFKCLGEGILEKAFQGYNACIFAYGQTGSGKSFSMMGHAEQLG
LIPRLCCALFQRIALEQNESQTFKVEVSYMEIYNEKVRDLLDPKGSRQSLKVREHKVLGP
YVDGLSQLAVTSFEDIESLMSEGNKSRTVAATNMNEESSRSHAVFNIIITQTLYDLQSGN
SGEKVSKVSLVDLAGSERVSKTGAAGERLKEGSNINKSLTTLGLVISSLADQAAGKGKNK
FVPYRDSVLTWLLKDNLGGNSQTSMIATISPAADNYEETLSTLRYADRAKRIVNHAVVNE
DPNAKVIRELREEVEKLREQLSQAEAMKAPELKEKLEESEKLIKELTVTWEEKLRKTEAI
AQERQRQLESMGISLETSGIKVGDDKCYLVNLNADPALNELLVYYLKDHTRVGADTSQDI
QLFGIGIQPEHCEIDIAADGDITLTPKENARSCVNGTLVCSTTQLWHGDRILWGNNHFFR
INLPKRKRRDWLKDFERETSSAEHDLDAASEASSEPDYNYEFAQMEVIMKTLNSNDPVQN
VVQVLEKQYLEEKRTALEEQRLMYERELEQLRQQLSPERQPPSSASDRLAYSSQTAQQKV
TQWAEERDELFRQSLAKLREQLVKANTLVREANFLAEEMSKLTDYQVTLQIPAANLSANR
KRGAIVSEPAIQARRKGKGTQVWTIEKLENKLIDMRDLYQEWKENVPEAKRLYGKRGDPF
YEAQENHNLIGVANVFLECLFCDVKLQYAVPIISQQGEVAGRLHVEVTRITGTIPERMAE
DDSSENSSESGSLEVVDSSGEVIHRVKKLTCRVIIKEATGLPISLSNFVFCQYTFWDQCE
STVAAPVVDPDVPSPQSKDAQYTVTFSHCKDYVVTVTEEFLEFISDGALAIEVWGHRCAG
NGSPIWEVDSLHAKTRTLHDRWNEVTRRIEVWISILELNELGDYAAVELHQAKDVNTGGV
FQLRQGHSRRVQVTVKPVQHSGTLPLMVEAILSVSIGCVTARSTKLQRGLDSYQEEDLNC
VRERWSDALIKRREYLDEQIKKVSNKKEKTEDDMEREARLVEQWVGLTEERNAVLVPAPG
SGIPGAPADWVPPPGMETHIPVLFLDLNADDLSANEQLVGPHASGVNSILPKEHGSQFFY
LPIIKHSDDEVSATASWDSSVHDSLHLNRVTPQNERIYLIVKTTVQLSHPAAMELVLRKR
IAANIYNKQSFTQSLKRRISLINICYSCGVTYEIVSNIPKATEEIEDRETLALLAARSEN
EGTLDGETYIEKYTRGVLQVENILSLERLRQAVTVKEALSTKARHIRRSLSTPNVHNVSS
SRPDLSGFDEDDKGWPENQLDVSDYSSSYQDVACYGTLPRDSPRRSKEGCPSENPHALTV
SPFKAFSPQPPKFFKPLMPVKEEHKKRLALEARPLLSQEDSEEEENELEALSRKLMLTQP
YVPVEFADFSVYNASLENREWSSSKADLTDSRALEKAVSRSPTTSSLTSGYFSHSASNAT
LSDMAVPSSDSSDQLAVSTKEVECAEPPGPSLAPDVRPASNQELTEVGRGSGKDETIAVP
LEENSALPKGTPSPQSIPEESSRMPCRTASCSELDVGPSKDGHQAREFCPGEVTIEHTTN
ILEDHSFTEFMGVSDGKDFDGLADCSVGEPSRRRALTNETDHKGIPERPPDADRLHPKIE
NDQEATATR*
MSMv4 transcript
MSDTKVKVAVRVRPMNRRELELNTKCVVEMEGNQTVLHPPPSNTKQGERKPPKVFAFDYC
FWSMDESNTTKYAGQEVVFKCLGEGILEKAFQGYNACIFAYGQTGSGKSFSMMGHAEQLG
LIPRLCCALFQRIALEQNESQTFKVEVSYMEIYNEKVRDLLDPKGSRQSLKVREHKVLGP
YVDGLSQLAVTSFEDIESLMSEGNKSRTVAATNMNEESSRSHAVFNIIITQTLYDLQSGN
SGEKVSKVSLVDLAGSERVSKTGAAGERLKEGSNINKSLTTLGLVISSLADQAAGKGKNK
FVPYRDSVLTWLLKDNLGGNSQTSMIATISPAADNYEETLSTLRYADRAKRIVNHAVVNE
DPNAKVIRELREEVEKLREQLSQAEAMKAPELKEKLEESEKLIKELTVTWEEKLRKTEAI
AQERQRQLESMGISLETSGIKVGDDKCYLVNLNADPALNELLVYYLKDHTRVGADTSQDI
QLFGIGIQPEHCEIDIAADGDITLTPKENARSCVNGTLVCNTTQLWHGDRILWGNNHFFR
INLPKRKRRDWLKDFERETSSAEHDLDAASEASSEPDYNYEFAQMEVIMKTLNSNDPVQN
VVQVLEKQYLEEKRTALEEQRLMYERELEQLRQQLSPERQPPSSASDRLAYSSQTAQQKV
TQWAEERDELFRQSLAKLREQLVKANTLVREANFLAEEMSKLTDYQVTLQIPAANLSANR
KRGAIVSEPAIQARRKGKGTQVWTIEKLENKLIDMRDLYQEWKENVPEAKRLYGKRGDPF
YEAQENHNLIGVANVFLECLFCDVKLQYAVPIISQQGEVAGRLHVEVTRITGTIPERMAE
DDSSENSSESGSLEVVDSSGEVIHRVKKLTCRVIIKEATGLPISLSNFVFCQYTFWDQCE
STVAAPVVDPDVPSPQSKDAQYTVTFSHCKDYVVTVTEEFLEFISDGALAIEVWGHRCAG
NGSPIWEVDSLHAKTRTLHDRWNEVTRRIEVWISILELNELGDYAAVELHQAKDVNTGGV
FQLRQGHSRRVQVTVKPVQHSGTLPLMVEAILSVSIGCVTARSTKLQRGLDSYQEEDLNC
VRERWSDALIKRREYLDEQIKKVSNKKEKTEDDMEREARLVEQWVGLTEERNAVLVPAPG
SGIPGAPADWVPPPGMETHIPVLFLDLNADDLSANEQLVGPHASGVNSILPKEHGSQFFY
LPIIKHSDDEVSATASWDSSVHDSLHLNRVTPQNERIYLIVKTTVQLSHPAAMELVLRKR
IAANIYNKQSFTQSLKRRISLINICYSCGVTYEIVSNIPKATEEIEDRETLALLAARSEN
EGTLDGETYIEKYTRGVLQVENILSLERLRQAVTVKEALSTKARHIRRSLSTPNVHNVSS
SRPDLSGFDEDDKGWPENQLDVSDYSSSYQDVACYGTLPRDSPRRSKEGCPSENPHALTV
SPFKAFSPQPPKFFKPLMPVKEEHKKRLALEARPLLSQEDSEEEENELEALSRKLMLTQP
YVPVEFADFSVYNASLENREWSSSKADLTDSRALEKAVSRSPTTSSLTSGYFSHSASNAT
LSDMAVPSSDSSDQLAVSTKEVECAEPPGPSFAPNVRPASNQELTEVGRGSGKDETIAVP
LEENSALPKGTPSPQSIPEESSRMPCRTASCSELDVGPSKDGHQAREFCPGEVTIEHTTN
ILEDHSFTEFMGVSDGKDFDGLADCSVGEPSRRRALTNETDHKGIPERPPDADRLHPKIE
NDQETTATR*
homology99.77 (1750 / 1750)

Exon Detail Report

Target Strain  MSMv4  JF1v3  KJRv1  SWNv1  CHDv1  NJLv1  BLG2v1  HMIv1  BFMv1  PGN2v1
Gene Symbol (Gene ID) Kif13a (ENSMUSG00000021375)
Transcript ID ENSMUST00000056978
No. Exon / Intron Start End Start Phase End Phase Length Sequence
5' upstream sequence
..........CTCCCCATAAAGCAGTTCGTGAATGAGTGAATTTGGACCTTCATGCCATA
GTGAGATTCCCCACCGGATCCAAACTGTTAAGACTTGGAGCACTTTTCAAAAACGCCTTG
GCACCACGGAAGCGCCGCCCTCAAGCACTTGTTGAACCAAACAGAGCAAATCCGCTTCCT
TCGGTTCCGCCCAGGCTGGGAGGTCTGGCTTTGGCAAAAGCGCGGATCGCGCTGCTGTGC
CTTTCTTACGTAAGAGTTAATGAACCCTCCCGGCCATCTAGATCCCTCCCATTACAAGGG
CGCAAGGGAAAGAAAATGAGCGCCGTATTTACAAACACACGGTTTTGGTGGTCCATTGCA
AATTCATGTCTAGCCTTGGCTCCCCACAAAGAGCTTCCAACACCGCGGCAAAGCTCGGTG
TGGGGCGCCGAGGGGCGGTGCGCTGTGGATGTCAGTGGAGGCGGAAGGATGGCGTGGATT
AGGCCTGCGCACCCGGCACCCTCTCCAATGCCCCCCAGACCGCCCCAGGGCCCTGGCTGT
GAGGGTGACAGCGGCCCCTGAAGGTGACTCGAGCTCCAGGAGGTGTCTGTGACGTCCCCC
GCAGGCTCAGGAACAGGGGAAGCCAGGGGCTCCTTCTCCAGGCCCAGCAGCCCGGAGCCC
GAACGCCTTTGCAGAGCGTCCCTTCCCGTGTCCCGGCTGCCCTGAGGCCGGAGACGCTCG
CCTTTGTAAAGCGCCCCTTCCCGGTCTGCAGCGGCCTTACAGCCCGGGCGCGGCCCCCGG
AGCGGAAGATGGCGACGCTGCCCGGCTCCCGGCGGCCGCGAGGGGCCGCGGTGCTGCGCG
CTCGGCTCGGCCCGAGCGGCTAGAGCGGCGCTTGGGCCCGCGGCCTCCTCCCGCTGCCGC
GCCCCGCCCCGCGCCCGCCCCTCCCCGGGCCCGGCCGTGCCCCGCGTCGCGCTCCCCCGG
GATGGCCCGCGCGCCTCGGCGCTGCGTCTCGGAGCTCTCGGCGGAGCGGC
1 EXON 1 46,929,567 46,929,718 - 1 152
GGCGGCCGCGCTCGGGGGGCGCGCGGCTGCTGCTGCTGCGGCGGCGGCGGCGCGGCGCTT
GAAGGGGCCGCGTCGGGCGGAGCAGCGCGCCGCCAACATGTCGGATACGAAGGTAAAAGT
TGCCGTCCGGGTCCGGCCCATGAACCGAAGAG
INTRON 1 - 2 46,929,307 46,929,566 260
GTGAGCCGCTCTCCCCAGCTCCTTT..........CATCACCCTGCCCCTGTGCTTTCAG
2 EXON 2 46,929,216 46,929,306 1 2 91
AGCTGGAACTGAACACCAAGTGCGTGGTGGAGATGGAAGGGAACCAGACGGTCCTGCACC
CTCCTCCTTCCAACACTAAGCAGGGAGAAAG
INTRON 2 - 3 46,864,832 46,929,215 64,384
GTAAATCCCATCCCGGCGGCTCCTG..........GAATTTTTTTCTTTTCATCGTGAAG
3 EXON 3 46,864,819 46,864,831 2 0 13
AAAACCTCCCAAG
INTRON 3 - 4 46,848,387 46,864,818 16,432
GTAAGTGCTGGCGTGGAACTGGGTA..........CTTTATATTTTGTTCTTCCATTCAG
4 EXON 4 46,848,326 46,848,386 0 1 61
GTGTTTGCCTTTGATTATTGCTTTTGGTCCATGGATGAATCGAACACAACAAAATATGCT
G
INTRON 4 - 5 46,832,817 46,848,325 15,509
GTAAGTTGGCAGTTCCCTCTGGGCT..........CTTAAATGTTTGTTTTGTTTTCTAG
5 EXON 5 46,832,724 46,832,816 1 1 93
GTCAAGAAGTCGTTTTCAAGTGCCTCGGGGAAGGAATTCTCGAGAAAGCCTTTCAGGGAT
ACAATGCTTGTATTTTTGCATATGGCCAGACAG
INTRON 5 - 6 46,830,975 46,832,723 1,749
GTAAGATGTTGCTTTTATTGAAGCT..........ACGCCCCTCTCTTGCTCTTTTCCAG
6 EXON 6 46,830,794 46,830,974 1 2 181
GTTCTGGAAAGTCCTTTTCCATGATGGGCCACGCAGAGCAGCTGGGCCTTATCCCAAGGC
TCTGCTGTGCTCTGTTTCAAAGGATCGCCCTGGAGCAAAATGAGTCACAGACCTTCAAAG
TCGAGGTATCGTATATGGAGATCTATAACGAGAAGGTTCGGGACCTCTTGGACCCCAAAG
G
INTRON 6 - 7 46,826,781 46,830,793 4,013
GTGAGTGAGTGCTTTGAAGTAAAGT..........CACTTGATTCTTCTTCCTCCCCTAG
7 EXON 7 46,826,693 46,826,780 2 0 88
GAGCAGGCAGTCTCTGAAAGTCCGAGAGCATAAGGTCCTGGGGCCGTATGTCGATGGTCT
GTCTCAGCTGGCTGTCACCAGCTTTGAG
INTRON 7 - 8 46,825,341 46,826,692 1,352
GTAAGAGTCTTTTTTTTTTTTTTTT..........GCACTTTCTTGGTCTTTACCTCTAG
8 EXON 8 46,825,206 46,825,340 0 0 135
GACATTGAGTCACTGATGTCTGAGGGAAATAAGTCTCGAACAGTAGCAGCGACCAACATG
AATGAGGAGAGCAGCCGTTCCCATGCGGTCTTCAACATCATCATCACACAGACGCTGTAT
GACCTACAGTCTGGG
INTRON 8 - 9 46,824,062 46,825,205 1,144
GTAAGGGAGCTCGGAGTGGAAACAG..........TTTCTCTCTTCTTTCCTACAATTAG
9 EXON 9 46,823,949 46,824,061 0 2 113
AACTCTGGGGAGAAGGTCAGCAAGGTGAGCCTGGTAGACCTGGCGGGGAGCGAGAGAGTG
TCGAAGACTGGAGCTGCGGGTGAGCGGCTGAAAGAAGGCAGCAACATTAACAA
INTRON 9 - 10 46,816,399 46,823,948 7,550
GTAAGGTGACCTGAGCAATCCAGGC..........TTAATTTTCACTCCTCTTGTGGCAG
10 EXON 10 46,816,287 46,816,398 2 0 112
ATCCCTTACAACCTTGGGATTGGTTATATCGTCACTGGCTGACCAGGCCGCTGGCAAAGG
CAAAAACAAATTCGTGCCTTATCGAGATTCGGTCCTTACTTGGCTTCTTAAG
INTRON 10 - 11 46,815,423 46,816,286 864
GTAATTTGTTAACCTAGGATTCATA..........TGCTGCTATTTGCCATTCTTTATAG
11 EXON 11 46,815,210 46,815,422 0 0 213
GACAATTTAGGAGGGAACAGCCAGACCTCTATGATAGCGACCATCAGCCCAGCAGCAGAC
AACTACGAGGAGACACTGTCCACGCTGAGATACGCAGATCGAGCCAAGAGGATTGTGAAC
CACGCTGTGGTGAATGAGGACCCCAATGCCAAGGTCATCCGAGAGCTTCGAGAGGAAGTG
GAGAAACTGAGGGAGCAGCTCTCGCAGGCTGAG
INTRON 11 - 12 46,814,271 46,815,209 939
GTAATCTCTGTCTGCCATGCCCTGT..........TGACATCTCTGGTTTATTTTAAAAG
12 EXON 12 46,814,160 46,814,270 0 0 111
GCCATGAAAGCCCCCGAGCTAAAGGAGAAGCTCGAAGAGTCTGAGAAGCTGATAAAGGAG
CTAACGGTGACGTGGGAAGAGAAGCTGAGGAAAACAGAAGCGATCGCACAG
INTRON 12 - 13 46,812,864 46,814,159 1,296
GTGGGCTCCTGAGGTGGCTTCCTCC..........TTCTTCTGTCTGTTTCCGTGCCCAG
13 EXON 13 46,812,729 46,812,863 0 0 135
GAGAGACAGCGGCAGCTGGAAAGCATGGGAATCTCCCTGGAGACCTCTGGCATCAAGGTG
GGGGACGACAAGTGCTACCTCGTCAACCTGAACGCAGACCCTGCCCTCAACGAGCTTCTG
GTTTACTATTTAAAG
INTRON 13 - 14 46,810,822 46,812,728 1,907
GTGAGAAGGGCTATGAGAACAGACC..........TCCCGTCTTCAATTGTATGTTGTAG
14 EXON 14 46,810,691 46,810,821 0 2 131
GATCACACCCGGGTGGGTGCAGATACCTCTCAGGACATCCAGCTCTTCGGAATAGGGATT
CAGCCCGAGCACTGTGAGATCGACATCGCAGCGGATGGAGACATCACTCTCACGCCCAAA
GAAAATGCAAG
INTRON 14 - 15 46,809,245 46,810,690 1,446
GTAGGAGGCGCTGCGGAGGCTTCTG..........GGTACCTTCCTTTGTGTCCCTCCAG
15 EXON 15 46,809,158 46,809,244 2 2 87
GTCCTGTGTCAATGGCACCCTTGTCTGCAATACTACCCAGCTGTGGCACGGCGACAGGAT
CTTATGGGGAAACAACCACTTTTTTAG
INTRON 15 - 16 46,809,058 46,809,157 100
GTAACAACTTCACGCTCTCTAGCGT..........CATCTAATGATGAAAACCTCCACAG
16 EXON 16 46,808,891 46,809,057 2 1 167
AATTAACTTGCCTAAGAGGAAACGGCGGGACTGGTTGAAAGACTTTGAGAGAGAAACCAG
TTCCGCGGAGCACGATCTAGACGCTGCGAGCGAGGCTTCCTCGGAGCCAGACTACAACTA
CGAGTTCGCACAGATGGAGGTCATCATGAAAACACTGAACAGCAATG
INTRON 16 - 17 46,802,730 46,808,890 6,161
GTAAGGAAGTGGCTCTGGCCTATGT..........CTTGCCTCTTCTCTTGGCTCCCCAG
17 EXON 17 46,802,516 46,802,729 1 2 214
ATCCAGTTCAAAATGTGGTTCAGGTCCTGGAGAAGCAGTACCTGGAAGAGAAGCGGACCG
CCCTGGAGGAACAGCGGCTCATGTACGAACGCGAGCTGGAGCAGCTTCGCCAGCAGCTCT
CTCCTGAGAGGCAGCCGCCCAGCAGCGCCTCAGACCGTCTGGCCTACAGCAGCCAGACAG
CCCAGCAGAAGGTGACCCAGTGGGCCGAGGAGAG
INTRON 17 - 18 46,801,444 46,802,515 1,072
GTAAGGACAGAGACAGACCCCAAGT..........TGCTTTCTTTTCTTCAACGTTGCAG
18 EXON 18 46,801,281 46,801,443 2 0 163
GGATGAACTCTTTAGGCAGAGCTTGGCCAAGCTTCGAGAGCAGCTGGTGAAAGCCAACAC
TTTGGTGAGGGAAGCCAACTTCCTAGCCGAGGAGATGAGCAAGCTCACTGACTACCAAGT
GACTCTGCAGATCCCTGCGGCCAACCTCAGTGCCAACAGGAAG
INTRON 18 - 19 46,799,334 46,801,280 1,947
GTAGGCATGGCCCTAGGGAATGGGA..........CGCTCTGTCTTCCATCACAATACAG
19 EXON 19 46,799,193 46,799,333 0 0 141
AGAGGCGCAATCGTCAGCGAGCCCGCCATCCAAGCCAGGAGGAAAGGGAAGGGCACCCAG
GTCTGGACCATTGAGAAGCTGGAGAATAAGCTAATTGATATGAGAGACCTTTACCAAGAA
TGGAAAGAAAATGTTCCTGAG
INTRON 19 - 20 46,798,492 46,799,192 701
GTAAGAGAAACAGAGCATGAAGGAG..........CCCAATGACCTATCCTTTTTCTCAG
20 EXON 20 46,798,342 46,798,491 0 0 150
GCCAAGAGGCTCTATGGGAAGCGAGGTGACCCTTTTTATGAAGCGCAGGAGAATCACAAC
CTCATTGGTGTGGCTAATGTGTTTTTGGAATGTCTCTTCTGTGATGTGAAGCTTCAATAT
GCAGTACCCATCATCAGCCAGCAGGGGGAG
INTRON 20 - 21 46,794,053 46,798,341 4,289
GTAAGGACACGCCAGCCCCTAGGAA..........ACTATGCTCCTGTTCCTTGACCCAG
21 EXON 21 46,793,891 46,794,052 0 0 162
GTTGCCGGGCGCCTCCATGTGGAGGTGACGCGCATTACAGGAACCATTCCAGAACGCATG
GCGGAGGATGACTCTTCAGAGAACTCTAGTGAGAGCGGGAGTCTTGAAGTGGTTGACAGC
AGCGGCGAAGTCATTCACCGGGTCAAAAAGCTGACATGCAGG
INTRON 21 - 22 46,791,508 46,793,890 2,383
GTGAGAGAGCAGTGATCGGGGCTCA..........TAATTTATTTTTAAAATCTCTTCAG
22 EXON 22 46,791,334 46,791,507 0 0 174
GTGATAATTAAAGAGGCAACCGGGCTACCCATAAGCCTCTCAAATTTCGTCTTCTGTCAG
TACACGTTCTGGGACCAGTGTGAGTCTACAGTGGCTGCTCCAGTGGTGGACCCAGATGTG
CCCTCCCCGCAGTCCAAGGACGCACAGTACACGGTGACCTTCTCTCACTGTAAG
INTRON 22 - 23 46,788,210 46,791,333 3,124
GTATGGAGACAATTACAAAGTGAGG..........CTCTCCTGCCTTCTGCTTGTCCCAG
23 EXON 23 46,788,058 46,788,209 0 2 152
GACTATGTGGTGACTGTCACAGAAGAGTTCCTGGAGTTCATTTCTGATGGTGCGCTGGCG
ATTGAGGTGTGGGGCCACAGGTGTGCTGGGAACGGAAGCCCCATCTGGGAGGTGGACTCA
CTCCATGCAAAGACAAGGACATTGCATGACAG
INTRON 23 - 24 46,786,646 46,788,057 1,412
GTGTGTTCTTGCTGTGAGCATGAGA..........GCCTGCTGGGATGTGGTTTCTGCAG
24 EXON 24 46,786,513 46,786,645 2 0 133
GTGGAATGAAGTGACCCGGAGAATAGAGGTGTGGATCTCCATTCTGGAGCTGAATGAGCT
CGGGGATTATGCCGCTGTGGAGCTTCACCAGGCGAAAGACGTCAACACTGGCGGCGTCTT
CCAACTCAGACAG
INTRON 24 - 25 46,785,393 46,786,512 1,120
GTATGAAGTTTGTCTGAGGGTTTCC..........ATCTTCGCTTCCTTCACCTCTGCAG
25 EXON 25 46,785,246 46,785,392 0 0 147
GGTCACTCCCGTAGAGTGCAGGTCACAGTGAAACCTGTACAGCACTCAGGGACACTGCCA
CTCATGGTTGAAGCCATCCTATCAGTATCCATTGGCTGCGTGACCGCCAGGTCCACCAAG
CTGCAGAGAGGGCTGGACAGCTACCAG
INTRON 25 - 26 46,778,994 46,785,245 6,252
GTAAGACACGTGTCTGAAGTACTAT..........AAAAAATTTCCCCTCTCATTGTCAG
26 EXON 26 46,778,894 46,778,993 0 1 100
GAAGAAGACTTGAATTGTGTAAGAGAGAGATGGTCCGATGCACTCATTAAACGACGGGAA
TACTTAGACGAACAGATTAAAAAAGTCAGCAATAAAAAAG
INTRON 26 - 27 46,777,214 46,778,893 1,680
GTATGTGATGGGGTTCACAAGATGG..........GTCATGATCTTCTGTCACTCTACAG
27 EXON 27 46,777,087 46,777,213 1 2 127
AGAAAACAGAAGACGACATGGAGCGGGAAGCCAGGCTGGTGGAGCAGTGGGTGGGGCTGA
CAGAGGAGAGGAATGCTGTGCTGGTGCCCGCCCCTGGCAGCGGAATCCCCGGGGCACCTG
CTGACTG
INTRON 27 - 28 46,775,459 46,777,086 1,628
GTAAGGCCGCTCACCCTTCTCTGTG..........GCTTAAACTTTGCTGTTGAATTTAG
28 EXON 28 46,775,403 46,775,458 2 1 56
GGTCCCACCTCCTGGCATGGAAACACACATCCCGGTTCTCTTCCTGGATCTGAACG
INTRON 28 - 29 46,773,709 46,775,402 1,694
GTAAGTAGGCAGGCACTCACCCATC..........CATCCCGTGCCTTGACCTTGGTCAG
29 EXON 29 46,773,584 46,773,708 1 0 125
CGGATGACCTCAGTGCCAATGAGCAGCTGGTGGGCCCCCATGCGTCCGGTGTGAACTCCA
TCCTGCCCAAGGAACACGGCAGTCAGTTTTTCTACCTGCCCATCATAAAGCACAGTGATG
ACGAG
INTRON 29 - 30 46,772,948 46,773,583 636
GTAACTTACCCCGGGCTCTCTCGGG..........TCCCCCAACTTTCTGCTACTCCAAG
30 EXON 30 46,772,771 46,772,947 0 0 177
GTTTCAGCCACAGCCTCCTGGGACTCCTCTGTGCACGACTCTCTTCACCTGAATCGGGTC
ACACCGCAGAATGAAAGGATCTACCTGATCGTGAAGACCACCGTGCAGCTCAGCCACCCG
GCCGCCATGGAGCTAGTGTTGCGGAAGCGGATCGCGGCCAATATTTATAACAAGCAG
INTRON 30 - 31 46,771,599 46,772,770 1,172
GTAGTGATGGGACTGACTGGCCATA..........CAGCTTGCCTTTCCTTTTCTACCAG
31 EXON 31 46,771,506 46,771,598 0 0 93
AGTTTCACCCAGAGTTTGAAGAGACGAATATCACTGATCAATATATGTTACTCCTGCGGC
GTGACCTATGAGATAGTATCCAATATCCCAAAG
INTRON 31 - 32 46,771,370 46,771,505 136
GTAACACCTGCTGCTGTTTCAGATG..........CAGTCGCCTCCTTTCTGTGCCTTAG
32 EXON 32 46,771,217 46,771,369 0 0 153
GCGACCGAGGAGATTGAGGACCGGGAAACCCTGGCCCTCCTGGCAGCGCGGAGTGAGAAC
GAGGGCACTTTGGATGGGGAGACATACATCGAGAAGTACACGCGGGGCGTGCTGCAGGTG
GAGAATATCCTGAGCCTGGAGCGGCTCCGGCAG
INTRON 32 - 33 46,769,232 46,771,216 1,985
GTGCGTAGCTGACTGTCTAGCCCTG..........TCTCTGCTTTGCTGTGTATTTACAG
33 EXON 33 46,769,154 46,769,231 0 0 78
GCTGTCACGGTGAAGGAAGCGCTTTCCACCAAAGCGAGGCACATTCGGAGAAGCCTCAGT
ACACCGAACGTTCACAAC
INTRON 33 - 34 46,764,648 46,769,153 4,506
GTGAGTACACGCTGCCAGGGTCCGG..........TTGGTAAAATGTTCGTCTCTCGCAG
34 EXON 34 46,764,600 46,764,647 0 0 48
GTCTCCTCTAGCCGACCAGATCTCTCTGGCTTCGATGAAGACGATAAG
INTRON 34 - 35 46,763,454 46,764,599 1,146
GTACGTATATAGTGCATATCAACAC..........GTTGACCTATATTTTTACTTTGCAG
35 EXON 35 46,763,348 46,763,453 0 1 106
GGCTGGCCCGAGAACCAGTTAGACGTGTCTGACTACAGCTCCAGCTACCAAGACGTCGCA
TGCTATGGGACTTTACCCAGGGACTCACCTCGCAGAAGCAAGGAAG
INTRON 35 - 36 46,761,425 46,763,347 1,923
GTAGTGATAGCATGATTGCTTTTGG..........CTCATGCCCTCTTTGTATTCCTCAG
36 EXON 36 46,761,273 46,761,424 1 0 152
GTTGTCCATCAGAGAATCCTCATGCCTTAACAGTCAGCCCTTTTAAAGCGTTCTCTCCTC
AGCCACCAAAGTTCTTCAAACCCCTCATGCCTGTAAAAGAGGAGCATAAGAAAAGGTTGG
CCCTGGAAGCCAGACCTCTCCTAAGCCAAGAG
INTRON 36 - 37 46,752,873 46,761,272 8,400
GTAAATGTTCGACTTCTCTCTACTG..........GCTGGCTCTGGCTTCCTTTCTGTAG
37 EXON 37 46,752,081 46,752,872 0 0 792
GACTCAGAAGAGGAGGAAAACGAGCTGGAAGCTCTCAGCAGGAAGCTGATGCTTACACAG
CCTTATGTGCCCGTGGAGTTCGCTGACTTCAGTGTTTACAATGCCAGCTTGGAGAACAGG
GAGTGGTCCTCTTCTAAGGCGGACCTGACAGACTCGAGAGCCTTGGAGAAAGCAGTGTCC
CGTAGCCCTACCACCAGCAGCCTCACCAGTGGCTACTTCTCCCACAGTGCCTCCAATGCC
ACTCTGTCTGACATGGCAGTCCCCTCCAGCGACAGCTCAGACCAGCTTGCCGTCTCGACA
AAGGAGGTCGAGTGCGCCGAGCCCCCGGGACCATCATTTGCACCGAATGTCAGACCAGCT
TCGAATCAGGAGCTTACAGAAGTAGGAAGAGGCTCAGGGAAGGATGAGACAATCGCTGTG
CCGCTGGAGGAAAACAGTGCCTTACCCAAGGGGACCCCGTCACCCCAGAGCATCCCTGAG
GAAAGTTCCAGAATGCCATGCAGGACTGCTTCATGTTCAGAACTGGATGTCGGCCCCAGC
AAAGATGGCCACCAAGCCAGAGAATTCTGCCCAGGAGAGGTGACGATAGAACACACTACA
AACATTTTGGAGGACCATTCCTTCACAGAGTTCATGGGTGTGTCTGATGGCAAAGACTTT
GATGGTTTGGCAGATTGTTCTGTAGGGGAGCCCTCCAGGAGGAGGGCTCTAACAAACGAA
ACAGACCATAAAGGTATCCCAGAAAGACCTCCAGATGCCGACCGGCTGCATCCCAAGATA
GAGAACGACCAG
INTRON 37 - 38 46,750,627 46,752,080 1,454
GTAATCACTTCCAGAGGCAGCCGTT..........GGACTCACTGATCTCTGTATTCCAG
38 EXON 38 46,749,087 46,750,626 0 - 1,540
GAAACCACAGCCACTCGGTAAGGGACAGCCATGCCTCTCCAGGTCACAGCTTGGCAGCTT
CATTCATCAATCCCACCCTGGGACAGTCCATGCTCCATCTTCAGACAGCTGTGACCCAGC
TCGACCTCAGACCAGCATAGGGGAGCCCTGCACTTCCGCTCCCCAGTGGGAGAAGCAGCA
CTTTGTCCCATGGCGAATCACAGCTCCCTGCTCTTTCCAGAAAGGAAGAGAATCTCGGCT
TACCTACGTGGCAGTATTTTCGTACAAGCCCCCTCTGTGCAAAGACCTCCACAGACTCAA
ACTTTATTCTTGTACATTTTTAATCAGTTCTTCCCGCAGACTCTGGAGTCAGTGCTCTGA
TCTCTTTTTATAAATAATATATATTATGTATATGAATTGTGTATCTACGGTATGTCTGTC
CGGAGACATATCTGCACACTGAAAGGCAGATAGATGATTTGTCGAAAATCCCAAGGTACT
GGACTTTGTTACAAAGCGACCCAGTTGACTGCTTTGACAGGAGCAGATGAGAAGCATATC
TTATGTTCTGTAAGAATGAGGCTCTGAATCCCTCTCTATAGAAAAGGTTACAGGCACTGT
TCTTTATAACCAAAGAACTTCCAGGAGACTGAACGTCTTTGCTGTCCACTCTTGTTTTGT
GTGAGTATATAATCTCACTCCAATCTGGTGCCATACTTCCCTTGGCTACCAAGCCACGTG
CTGCCCTTGGTCCCTGTCCCCTTTCCTAAGCACACTGAGAAATCGCACAGCTGTAACCTT
CAGTCTTCCACATAGCCTGGTACCTACTGACTCGATATTGACCACTGACATGGTTGGGTG
GCTGGGACTCCTACTCCACCCTAGCAGTTCTCACATCCTGTCCACCTATCCAAGCAGGTG
GAGTGCACAGGGAAGTGTTACTGCACACAACGCAGCGATGTACCAAGAGTTGGGGTACAG
CCTTGCTGGCGGCTTCTTTATCAGTCTATTTCAGGTCGCTAGATTCTCTTGTGGTGTGGG
TTTGCTGTTTTTGCCTGACTCTGGAAAAATGCTGAAGAGAAGGACTAAGCTATCAAGTTC
GTAGGTTTGCACGTCACCTTGTCTGAGGGGGATTAAACATCAGACTGCTCCATTGTCATT
TTTTTTCCCCCGTTTTAGTTTTCAAAGTATCCTGCAAGGAGAGACACTGTAGGATCGTGG
TGTGGAAAATTTTACAGATATATTTTATGTCCTTACTCTGTAGATGCCTGTACAGTGGAC
CTCTATGTACAGCTACACGTGTGTTGTGAGGAAGTGAGAGAGCATGTGTGCAGTCTGCTG
TACTTTTCTGGTTTTTAAGTTCTTAGCATTGGTGAGGGAGATATGGGAGACTCTCTTGAC
AAGCTGCTGTTTGTGTGTATAGTGAGCTGACCGGTAGTATTTTACTACCATCTGTTTAAA
ACAAAAGCTGTAATTTATATTCCCTATCAACTTTATTGTATTTAATTGGTACAGATCTGT
GTGTGTTTTAGAATACAAACTGTCTAATTCAGAGTCCAAA
3' upstream sequence
GTGTTGATCGTCTGTTCTTTGTTGTTGTTGTTGTTGTTTTTTTTTTTCGAGACAGGGTTT
CTCTGTACAGTCCTGGCTATCCTGGAACTCACTTTGTAGACCAGGTTGGCCTCGAACTCA
GAAATCCACCTGCCTCTGCCTCCCGAGTACTGGGACTAAAGGTGTGCGCCACCACACCCA
GCTTGATCGTCTGTTCTTAATAATGCTACCATGGGGTGGGATCAGAACTCAGTGGCTAAA
ATGACGACCTGGGTTTGAATCACAGGACCCATATTTCTTAAAGGAAAAGGAAAAGGAAAA
GAAAGAGAGAAAGCAAGCCAGCCAGTCTAGTATAGTGGTACATGCAGAGAGGTGGATCCT
AAGGCTCATGGGCCAGCAAGCTTAGTCTAATCAGTGAATCCCAGACCTGTGAGAGAGTCT
GTCTCAAAATCAAAGTGAACAATGTCTGAGGAATGATATGACGTTGTTCTGTAGGCTGCA
TACCCTCACATGACCATTAGGTTCAGGTCCAGTTCACTGTCTTGTGTGCATATATACACC
TATGCTGTGAAAAAGCCTGCTAACATTTATCAATTTATTGAGGGCTTCACGTCAGCCAGA
CACTGCCCTGGGTACATTTGACGTTCACTTTGGATAATCTGATGGCACAGGTTGGTAATG
GAGTCTCAGCAAGGCTGGGTTTCAGCCCACATATCTGGCTGGTCGATTCCCTCTGTCTTC
TGCCAGGAAGTATGATCTGGAAGGGCTGTACTTGGCAGAGGGCAGATACAGGACACAGCA
GTGTGTGGTGTGATAATGACAGGCTGCTGATGTAAGAACAAGCCAGGGGCCTTTTTGTCT
CCAAGCAAACCTTGGACCTGTGGACCTATGCTGAAGATGCCCTTGCAGAGTCTTTGTAGG
AAAAGAGCTTTTTTGAAGTCTCCAGGAAATGGAGCCCAACAACAAGTGCTTTATTTGGGT
TTCCAGGAGCAGATAGACCAAGGAAATGGGAAACTCACTT..........

Sequence Detail Report

Gene Symbol (Gene ID) Kif13a (ENSMUSG00000021375)
Transcript ID ENSMUST00000056978
SNP Information
Strain :
Sequence Retrieve :
Exon translate :
CDS Start ( 1 ) - End ( 1750 )
-
Strand : forward reverse
Show sequence : nucleotide amino acid
Color information