MoG+ -Mouse Genome database with high added value-

Target CDS Information

Gene Symbol (Gene ID)

Susd3 (ENSMUSG00000021384)

Cross Reference

CCDS	CCDS26498.1
EMBL	AK003860, AK006068, AK013276, ...show all
Fantom	1110020G21, 1700017I11, 2810440J20
GO	GO:0003674, GO:0005575, GO:0005886, ...show all
goslim_goa	GO:0003674, GO:0005575, GO:0005623, ...show all
MGI_trans_name	Susd3-001
OTTP	OTTMUSP00000034655
OTTT	OTTMUST00000068501
protein_id	AAH45525.1, BAB23043.1, BAB24394.1, ...show all
RefSeq_mRNA	NM_025491.3

RefSeq_peptide	NP_079767
UCSC	uc007qiz.2
UniParc	UPI0000021BBD
Uniprot/SWISSPROT	Q9D176
Vega_transcript	OTTMUST00000068501, Susd3-001
Vega_translation	214439, OTTMUSP00000034655

Definition

protein_id:ENSMUSP00000061423
translation:

MRRTSATLRGRARPRWRAGNTTPVPVNQTGTCAQLHPPPQGTLQVVRGDGTSLGTVLIFH
CPSGHQMVGSGLLTCAWNGSTVDWSSGSPVCKAVPPHETFGFKVAVIASIVSCAIILLMS
MAFLTCCLLKCVQKNERRRADRTAQLWYQLRGEDLETVQAAYLGLKGHNHNNSSSVGGGN
GGPSGGGGKPGIQHSQAHDNHSFTTDPGDIREQAGVTHSVDKDPWTFRMGTPGPGGCSSS
PGTYVMVHALNSAGLAPGNPGRPKVYLPG

Chromosome

Length
Position(start - end)

16,995
49,231,136 - 49,248,132

Orient to Chromosome

minus

Link

Location : (13:49231136-49248132)
/

Detail Map

name	Susd3 (ENSMUSG00000021384)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : Susd3 note : sushi domain containing 3 [Source:MGI Symbol;Acc:MGI:1913579]

name	Susd3 (ENSMUSG00000021384)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000058196

name	Susd3 (ENSMUSG00000021384)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000021816

name	Susd3 (ENSMUSG00000021384)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000135784

name	Susd3 (ENSMUSG00000021384)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000119721

name	Susd3 (ENSMUSG00000021384) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS26498.1 Uniprot/SWISSPROT:Q9D176 RefSeq_peptide:NP_079767 RefSeq_mRNA:NM_025491.3 Vega_transcript:OTTMUST00000068501 Vega_transcript:Susd3-001 UCSC:uc007qiz.2 Fantom:1110020G21 Fantom:1700017I11 Fantom:2810440J20 EMBL:AK003860 EMBL:AK006068 EMBL:AK013276 EMBL:BC045525 GO:GO:0003674 GO:GO:0005575 GO:GO:0005886 GO:GO:0005886 GO:GO:0008150 GO:GO:0016021 MGI_trans_name:Susd3-001 Vega_translation:214439 Vega_translation:OTTMUSP00000034655 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005623 goslim_goa:GO:0005886 goslim_goa:GO:0008150 protein_id:AAH45525.1 protein_id:BAB23043.1 protein_id:BAB24394.1 protein_id:BAB28764.1 OTTP:OTTMUSP00000034655 OTTT:OTTMUST00000068501 UniParc:UPI0000021BBD
definition	note : transcript_id=ENSMUST00000058196 protein_id : ENSMUSP00000061423 translation : MRRTSATLRGRARPRWRAGNTTPVPVNQTGTCAQLHPPPQGTLQVVRGDGTSLGTVLIFHCPSGHQMVGSGLLTCAWNGSTVDWSSGSPVCKAVPPHETFGFKVAVIASIVSCAIILLMSMAFLTCCLLKCVQKNERRRADRTAQLWYQLRGEDLETVQAAYLGLKGHNHNNSSSVGGGNGGPSGGGGKPGIQHSQAHDNHSFTTDPGDIREQAGVTHSVDKDPWTFRMGTPGPGGCSSSPGTYVMVHALNSAGLAPGNPGRPKVYLPG

name	Susd3 (ENSMUSG00000021384) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS56880.1 Uniprot/SWISSPROT:Q9D176 RefSeq_peptide:NP_082616 RefSeq_mRNA:NM_028340.1 Vega_transcript:OTTMUST00000068502 Vega_transcript:Susd3-002 UCSC:uc007qja.2 Fantom:1110020G21 Fantom:1700017I11 Fantom:2810440J20 EMBL:AK003860 EMBL:AK006068 EMBL:AK013276 EMBL:BC045525 GO:GO:0003674 GO:GO:0005575 GO:GO:0005886 GO:GO:0008150 GO:GO:0016021 MGI_trans_name:Susd3-002 Vega_translation:214440 Vega_translation:OTTMUSP00000034656 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005623 goslim_goa:GO:0005886 goslim_goa:GO:0008150 protein_id:AAH45525.1 protein_id:BAB23043.1 protein_id:BAB24394.1 protein_id:BAB28764.1 OTTP:OTTMUSP00000034656 OTTT:OTTMUST00000068502 UniParc:UPI000000B883
definition	note : transcript_id=ENSMUST00000021816 protein_id : ENSMUSP00000021816 translation : MRRLSLSKVTCLALESKGTCAQLHPPPQGTLQVVRGDGTSLGTVLIFHCPSGHQMVGSGLLTCAWNGSTVDWSSGSPVCKAVPPHETFGFKVAVIASIVSCAIILLMSMAFLTCCLLKCVQKNERRRADRTAQLWYQLRGEDLETVQAAYLGLKGHNHNNSSSVGGGNGGPSGGGGKPGIQHSQAHDNHSFTTDPGDIREQAGVTHSVDKDPWTFRMGTPGPGGCSSSPGTYVMVHALNSAGLAPGNPGRPKVYLPG

name	Susd3 (ENSMUSG00000021384) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000068518 Vega_transcript:Susd3-004 Uniprot/SPTREMBL:D3YY27 UCSC:uc007qja.2 EMBL:AC140284 GO:GO:0003674 GO:GO:0005575 GO:GO:0008150 MGI_trans_name:Susd3-004 Vega_translation:214442 Vega_translation:OTTMUSP00000034669 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0008150 OTTP:OTTMUSP00000034669 OTTT:OTTMUST00000068518 UniParc:UPI0001611549
definition	note : transcript_id=ENSMUST00000135784 protein_id : ENSMUSP00000115888 translation : MRRLSLSKVTCLALESKAVPPHETFGFKVAVIASIVSCAIILLMSMAFLTCCLLKCVQKNERRRADRTAQLWYQLRGEDLETVQAAYLGLKGHNHNNSSSVGGGNGGPSGGGGKPGIQHSQAHDNHSFTTDPGDIREQA

name	Susd3 (ENSMUSG00000021384) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Uniprot/SWISSPROT:Q9D176 Vega_transcript:OTTMUST00000068503 Vega_transcript:Susd3-003 UCSC:uc007qjb.1 Fantom:1110020G21 Fantom:1700017I11 Fantom:2810440J20 EMBL:AK003860 EMBL:AK006068 EMBL:AK013276 EMBL:BC045525 GO:GO:0003674 GO:GO:0005575 GO:GO:0005886 GO:GO:0008150 GO:GO:0016021 MGI_trans_name:Susd3-003 Vega_translation:214441 Vega_translation:OTTMUSP00000034657 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005623 goslim_goa:GO:0005886 goslim_goa:GO:0008150 protein_id:AAH45525.1 protein_id:BAB23043.1 protein_id:BAB24394.1 protein_id:BAB28764.1 OTTP:OTTMUSP00000034657 OTTT:OTTMUST00000068503 UniParc:UPI0000027635
definition	note : transcript_id=ENSMUST00000119721 protein_id : ENSMUSP00000113631 translation : MRRTSATLRGRARPRWRAGNTTPVPVNQTGTCAQLHPPPQGTLQVVRGDGTSLGTVLIFHCPSGHQMVGSGLLTCAWNGSTVDWSSGSPVCKAVPPHETFGFKVAVIASIVSCAIILLMSMAFLTCCLLKCVQKNERRRADRYSGLMSFQKLCLAVRLLITSCQVPWGSV

name
type	misc_feature
link
xref
definition	note : contig AC140284.3 45990..186444(1)

name	Susd3 (ENSMUSG00000021384)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000068520 Vega_transcript:OTTMUST00000068520 MGI_trans_name:Susd3-006 OTTT:OTTMUST00000068520
definition	note : processed_transcript note : transcript_id=ENSMUST00000141408

name	Susd3 (ENSMUSG00000021384)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000068519 Vega_transcript:OTTMUST00000068519 MGI_trans_name:Susd3-005 OTTT:OTTMUST00000068519
definition	note : processed_transcript note : transcript_id=ENSMUST00000131880

Polymorphisms Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Susd3 (ENSMUSG00000021384)
Transcript ID	ENSMUST00000058196

Reports
substitution
cSNPs	5
Insertion	13
Deletion	18
SNPs	+1kb 49248390(c.-258A>C), 49249311(c.-1179A>G), 49249864(c.-1732G>A), 49250629(c.-2497T>G), 49250686(c.-2554T>C), 49250698(c.-2566A>G), 49250752(c.-2620T>A), 49250972(c.-2840G>T), 49251054(c.-2922G>T), 49251140(c.-3008A>G), 49251551(c.-3419A>G), 49251653(c.-3521G>A), 49251718(c.-3586C>G), 49251769(c.-3637A>G), 49251808(c.-3676G>T), 49251828(c.-3696G>A), 49252700(c.-4568G>A), 49252714(c.-4582A>C), 49252753(c.-4621A>T), 49252972(c.-4840G>A), 49253040(c.-4908G>T), 49253053(c.-4921C>T), 49253139(c.-5007C>T), 49253157(c.-5025G>A), 49253195(c.-5063T>G), 5'UTR CDS 49231198(c.748T>A), 49237603(c.435A>G), 49238812(c.402A>G), 49238818(c.396G>A), 49240515(c.245T>C), 3'UTR 49230872(c.264A>G), 49230912(c.224T>C), 49231016(c.120T>C), INTRON 49231622(c.615-291A>T), 49231977(c.615-646G>C), 49232391(c.615-1060A>G), 49232516(c.615-1185T>C), 49232521(c.615-1190C>A), 49232556(c.615-1225A>G), 49232562(c.615-1231A>G), 49232731(c.615-1400C>G), 49232740(c.615-1409A>G), 49233019(c.615-1688A>G), 49233022(c.615-1691G>A), 49233092(c.615-1761C>T), 49233177(c.615-1846T>C), 49233254(c.615-1923T>G), 49233277(c.615-1946G>A), 49233284(c.615-1953G>A), 49233312(c.615-1981G>A), 49233422(c.615-2091G>A), 49233612(c.615-2281A>G), 49233695(c.615-2364G>C), 49233699(c.615-2368C>T), 49233848(c.615-2517C>T), 49234009(c.615-2678C>T), 49234046(c.615-2715G>A), 49234131(c.615-2800G>A), 49234245(c.615-2914A>T), 49234271(c.615-2940C>T), 49234372(c.615-3041T>A), 49234505(c.614+2919C>G), 49234509(c.614+2915A>G), 49234568(c.614+2856A>G), 49234598(c.614+2826C>T), 49234637(c.614+2787G>A), 49234647(c.614+2777G>T), 49234977(c.614+2447T>C), 49235220(c.614+2204A>G), 49235266(c.614+2158C>T), 49235450(c.614+1974A>G), 49236045(c.614+1379C>T), 49236346(c.614+1078C>T), 49236394(c.614+1030G>A), 49236395(c.614+1029T>C), 49237702(c.426-90C>T), 49237736(c.426-124A>G), 49237741(c.426-129C>T), 49237801(c.426-189C>T), 49237868(c.426-256G>A), 49238125(c.426-513G>T), 49238168(c.426-556C>T), 49238528(c.425+261T>C), 49238589(c.425+200G>T), 49238612(c.425+177G>A), 49238633(c.425+156C>T), 49238956(c.278-20G>T), 49239037(c.278-101C>T), 49239039(c.278-103G>A), 49239133(c.278-197C>T), 49239165(c.278-229A>G), 49239215(c.278-279T>C), 49239651(c.278-715A>G), 49239658(c.278-722G>C), 49239717(c.277+766C>A), 49239777(c.277+706G>A), 49239796(c.277+687A>G), 49239820(c.277+663C>T), 49239863(c.277+620A>C), 49239869(c.277+614A>G), 49239938(c.277+545A>G), 49240110(c.277+373T>G), 49240291(c.277+192C>T), 49240312(c.277+171C>G), 49240329(c.277+154C>T), 49240747(c.89-76T>G), 49240866(c.89-195T>A), 49240885(c.89-214T>C), 49241110(c.89-439A>C), 49241115(c.89-444G>A), 49241138(c.89-467T>C), 49241153(c.89-482G>A), 49241232(c.89-561G>A), 49241261(c.89-590T>A), 49241309(c.89-638C>A), 49241371(c.89-700C>G), 49241438(c.89-767A>G), 49241454(c.89-783T>C), 49241517(c.89-846G>T), 49241547(c.89-876A>T), 49241573(c.89-902C>T), 49241707(c.89-1036C>T), 49241738(c.89-1067T>C), 49241828(c.89-1157C>T), 49241863(c.89-1192G>T), 49241885(c.89-1214G>A), 49242046(c.89-1375G>A), 49242076(c.89-1405A>G), 49242136(c.89-1465T>C), 49242173(c.89-1502C>T), 49242189(c.89-1518G>A), 49242503(c.89-1832G>A), 49242538(c.89-1867A>G), 49242832(c.89-2161T>C), 49242954(c.89-2283G>A), 49243137(c.89-2466T>C), 49243151(c.89-2480A>G), 49243386(c.89-2715C>T), 49243636(c.89-2965A>G), 49244545(c.88+3500A>G), 49244992(c.88+3053G>A), 49244998(c.88+3047A>G), 49245281(c.88+2764G>A), 49245323(c.88+2722T>C), 49245579(c.88+2466C>A), 49245912(c.88+2133G>A), 49246075(c.88+1970G>A), 49246102(c.88+1943A>G), 49246173(c.88+1872G>A), 49246209(c.88+1836T>C), 49246332(c.88+1713A>G), 49246483(c.88+1562G>A), 49246609(c.88+1436G>T), 49246705(c.88+1340T>C), 49246837(c.88+1208T>G), 49247003(c.88+1042G>A), 49247054(c.88+991G>A), 49247081(c.88+964C>G), 49247293(c.88+752G>T), -1kb 49225804(c.5332T>A), 49225822(c.5314G>A), 49225824(c.5312A>G), 49225838(c.5298G>T), 49225859(c.5277T>A), 49225900(c.5236A>C), 49226194(c.4942C>T), 49226290(c.4846A>T), 49226305(c.4831C>T), 49226478(c.4658C>T), 49226486(c.4650C>T), 49226531(c.4605G>T), 49226537(c.4599G>A), 49226575(c.4561T>C), 49226584(c.4552A>G), 49226663(c.4473C>T), 49226757(c.4379A>G), 49226875(c.4261C>T), 49227002(c.4134G>T), 49227024(c.4112A>G), 49227052(c.4084A>C), 49227105(c.4031G>A), 49227107(c.4029C>T), 49227339(c.3797G>A), 49227350(c.3786C>T), 49227358(c.3778G>A), 49227434(c.3702C>T), 49227574(c.3562C>T), 49227641(c.3495C>A), 49228066(c.3070A>G), 49228153(c.2983C>T), 49228158(c.2978A>T), 49228264(c.2872A>T), 49228268(c.2868A>G), 49228270(c.2866A>G), 49228272(c.2864A>G), 49228274(c.2862A>G), 49228553(c.2583C>A), 49228562(c.2574T>C), 49229163(c.1973A>G), 49229184(c.1952G>A), 49229492(c.1644G>A), 49230094(c.1042T>C), 49230118(c.1018G>A), 49230188(c.948T>C), 49230245(c.*891G>T),
Insertions	+1kb 49253208 (c.-5077_-5076insTTGG), 5'UTR CDS 3'UTR INTRON 49234273 (c.615-2944_615-2943dupCT), 49236844 (c.614+579_614+580insTCCTT), 49242040 (c.89-1370_89-1369insG), 49242256 (c.89-1586_89-1585insTCTT), 49243009 (c.89-2339_89-2338insC), 49243778 (c.89-3108dupC), 49245126 (c.88+2918dupT), 49245128 (c.88+2916dupT), 49245655 (c.88+2389_88+2390insTGC), -1kb 49227960 (c.3175_3176insG), 49228286 (c.2849_2850insTGG), 49230302 (c.833_834insCTCCC),
Deletions	+1kb 49248856 (c.-730_-725delAGGGGG), 49249252 (c.-1121delT), 49249518 (c.-1393_-1387delTTGGGGG), 49250243 (c.-2120_-2112delCCTCCTCCT), 49250986 (c.-2855delC), 5'UTR CDS 3'UTR INTRON 49234814 (c.614+2609delT), 49235096 (c.614+2326_614+2327delCA), 49237905 (c.426-299_426-294delTTTTTT), 49239080 (c.278-148_278-145delAATA), 49241535 (c.89-866_89-865delCT), 49241853 (c.89-1190_89-1183delGGGGTGGG), 49243115 (c.89-2453_89-2445delCCCCCCCCC), 49244105 (c.89-3440_89-3435delGTGTGT), 49245047 (c.88+2990_88+2997delAAACAAAC), 49245078 (c.88+2963_88+2966delCACT), 49245829 (c.88+2214_88+2215delGA), -1kb 49227226 (c.3906_3909delACTG), 49227484 (c.*3651delG),
coding sequence substitutions
premature termination by the nucleotide substitution	0
synonymous num	3
non-synonymous num	2
synonymous substitutions	49237603 (p.Gln145Gln), 49238812 (p.Lys134Lys), 49238818 (p.Val132Val),
non-synonymous substitutions	49231198 (p.Leu250Met), 49240515 (p.Val82Ala),
B6 transcript (ENSMUST00000058196)	MRRTSATLRGRARPRWRAGNTTPVPVNQTGTCAQLHPPPQGTLQVVRGDGTSLGTVLIFH CPSGHQMVGSGLLTCAWNGSTVDWSSGSPVCKAVPPHETFGFKVAVIASIVSCAIILLMS MAFLTCCLLKCVQKNERRRADRTAQLWYQLRGEDLETVQAAYLGLKGHNHNNSSSVGGGN GGPSGGGGKPGIQHSQAHDNHSFTTDPGDIREQAGVTHSVDKDPWTFRMGTPGPGGCSSS PGTYVMVHALNSAGLAPGNPGRPKVYLPG*
MSMv4 transcript	MRRTSATLRGRARPRWRAGNTTPVPVNQTGTCAQLHPPPQGTLQVVRGDGTSLGTVLIFH CPSGHQMVGSGLLTCAWNGSTADWSSGSPVCKAVPPHETFGFKVAVIASIVSCAIILLMS MAFLTCCLLKCVQKNERRRADRTAQLWYQLRGEDLETVQAAYLGLKGHNHNNSSSVGGGN GGPSGGGGKPGIQHSQAHDNHSFTTDPGDIREQAGVTHSVDKDPWTFRMGTPGPGGCSSS PGTYVMVHAMNSAGLAPGNPGRPKVYLPG*
homology	99.26 (270 / 270)

Exon Detail Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Susd3 (ENSMUSG00000021384)
Transcript ID	ENSMUST00000058196


..........CATTGTGAAAGGTTTTGGGGGTGAAATTCTCATTTTTTTTTTCTATTGAG
TAGAGACTAAAGAACCAAGAAAACAAGAGCTGGAAGGATAGCTCAGCAGTAAAGAGCACC
TGCTGTTCTTGCATGTGATCTGAGTTTGGTTTCCAGCACCCACATGGTGACACACAGCCA
ACCACTGGCATGCAGAAGGCACACATACATGCAGGCCAACCGTTCATGCATAAAAGTAAA
ATAAATCTAAAGAAAAAAAGGATGCTCCCTGGAGACTTTGAAGAGCTCTGGCCCCACCTC
CTGTATGATGAGACAACGTGGATCTGTGGTTCTGTGGAGTTCTATCTGTAGTGCTTTGTT
CTGTAAGCCTAGGAAACATCCCCACCCTAAATAACTGTTGGTCAGCGCTGCTGAACATTG
GGGGAGGGGGAGGGGGAGGGGGAGGGGGGAGGGGCGGCACTGAGCCACACGATGGTGGTA
GGTGCCTCCCCCCCCCCACGTCCTTCACAGCTTCTACCCACAAATCAAGGACACTTTAAA
TCCCTCTAAGTCCCATCCCTGAGCCTCCAGGCAGCTGCTCTCCACTGGCAGACAGGGATC
TCTGGCTATGTGGCCAGGAATTCTGATATCTCAGAGTATGGTGGGGGTGGGGTAGGAGAG
GGGTTGGTATCACAGTGGGGTCTGTGGATGGACCTGCCTTTCACGATGCAGCAGACCGGA
CATAAGCTTGATTTCAACTTTAGGACATTAAAGAAAGTCACATCACGCGTGACTCGCAAG
TTCAAGTGAAAAGGAGACATTAGGGGGTGCTACCAACCCTGACTCCAGAAGAGAATGAGG
AGGCTGTCACTCTCCAAGGTCACCTGCCTGGCCCTAGAGTCCAAAGGTGAGTCGGGAGAG
GAAGGGTGTGCAGACAGACGGCTCTAGCTCAAAGGCTTACTTCGAGGCGATCAGCCTGGA
GGCTCCCCATTCTCTGCCCCTCCAGGTGTCCAATCCCACTTCTGCCACCC
AGTGCAAGGGGTTGGCGGGACCGGACTAAAGTTCAACTCTAGCGTCTTGGAGGGCGCGACCTGGGTGTGGCTAGAGACAGCCACGCCTTCCAACGACCCGCCCCTCAATTAAGTCCCGCCCCCACCTCCGCAAGCTCCACAGAACACTGCGGAGCGCTCAGGATGCGCCGAACGTCTGCGACCCTTCGGGGCCGAGCGAGGCCGCGGTGGCGTGCTGGGAACACAACGCCTGTCCCAGTGAACCAGACAG
GTGAGGGCTAGGGCCGCAGTTCTCA..........GCCTCACAGCCTCTTCTCTGTCCAG
GCACCTGTGCTCAGCTCCATCCCCCGCCTCAAGGCACCTTGCAAGTCGTCCGTGGAGATGGCACATCTCTGGGGACTGTGCTCATATTCCACTGCCCCTCTGGCCACCAGATGGTGGGGTCTGGCCTCCTCACTTGTGCCTGGAATGGGAGCACCGCTGACTGGTCTTCAGGAAGCCCTGTGTGCAAAG
GTAGGCCCCTCCTCCTTCCTGAGCT..........GAGCTTTGGTTTTTTTCCCTTGCAG
CTGTGCCACCGCATGAGACCTTCGGCTTTAAGGTGGCAGTGATCGCCTCCATTGTGAGCTGTGCCATCATCCTGCTCATGTCCATGGCCTTCCTCACCTGCTGCCTCCTCAAGTGTGTACAGAAGAATGAGCGGCGGCGTGCTGACAG
GTACAGTGGCCTCATGTCCTTCCAG..........CTTCATCCTGAGCTCTCTCCTCCAG
GACGGCACAGCTCTGGTACCAGCTGAGAGGCGAGGACCTGGAGACGGTACAAGCTGCCTACTTGGGCCTCAAGGGACACAACCACAATAACAGCAGCAGCGTCGGTGGTGGCAATGGTGGCCCCAGTGGTGGTGGCGGCAAGCCAGGAATTCAGCACAGCCAGGCCCATGACAACCACAGCTTCACCAC
GTAGGTTACCCTAGTCCTAAGGTGG..........CAGCTTATGCCTCTTCTTCCCACAG
AGACCCTGGTGACATCAGAGAGCAGGCTGGTGTGACCCACAGTGTGGACAAAGACCCTTGGACTTTCAGGATGGGAACTCCGGGCCCTGGTGGCTGCTCCAGCTCGCCAGGCACCTACGTGATGGTCCACGCGATGAACTCTGCAGGGCTGGCCCCTGGAAATCCTGGGAGGCCCAAAGTGTACCTTCCAGGGTGACCCCACTAGCCAGAGGTCTGCAAGTCAACGTTTGCCCAGCTGGACATGGGCCAGGGCAGTCACCTCCAGGCATAGGGGGCCATCGGGAGCCTAGCTGACATTAAAGGCTGGGGCCCCAGCGGGGAGCAGTCTTTTCTAGAGGTCTCCTCTGTGGCTGTTACAGGACCTGCTCAATGAACTGCTACTGGGGTGATGTCCCGAAGAAGTCACCACAACCAGGGTTCTTTTAGAGAGATTGAGACATTTTAAACAGATATAGTTTTGCATAGTAGACTATGAAAATATTAATAAAGTACTTTCAGCAAAACAGGTAGCCACCTTATCATCTTCTGGGGCATGGACGCCCCGCCTGGAAGCCAGGACCCCCAGAACTTCATCTGTCAACTGTGGTGAGAGAAATGGATGTGTTTTCTTTGCATAAAAACATAAAGTGGGGTTGGAAGTGC
ACCTCGGTTGGCAGAATGCTTGTGTATCTTGCAGAACAAGGCTTCAATCCCCAGCACCGT
ACAAACCTATAATCCCAGTGCTTGGAAGGTAGCAGGAGGAGGAGGAGGATATGAATTTCA
GGGTCATCCTGGGCTATGGGAAACCCTGTCGAAATAAATGAATTATAAACTCACTTTAAG
GTAGAAACCACTGTCCCAGTTGGCCATCCCATCAAATCCTCGAATCCAGTTGTTATAAAA
CCAGTCACATATTATCACCCCATGGAGCCCTGAGCTTGTTGGAGAGATGGGAGTCACTGA
GCTCTGGTTACTCACAGGTCTGTGTTTGCTGCTGGCAGTCAGTGGAGACCTTCTGAAGCC
TTAGTGGGAATAGTCTGCCTTCCACAGCCCCCCACCCCACCCCAGTATCTGCATAGCCTG
GAGGCTGATTTCCAAGGTGAGATGTGATGTGAGTTCCAGATGGGAGCTGTTGCTTTACAG
TCTTTTGCCTTGAAAGTCTCTCCCCCCCCCCCCATATTCTATTCATCAGGAAACCCCAGC
TGGGCTTCACTGGTGTGGGAAAGCAGAAGTGACAGACATATTTTAAAGCCATCTGCTGGG
TTTACAATCATAGTCCTAGCCACTCGTGAGGCTAAGGTAAAAAGATCACTTTTGAGCTGG
AGGCTAGCCTACATAGCAAGACACCCCTCCCCCCCATCTCAAACAAACGAAAAAACCCAA
CCTAAACCCCACCGCAGCTCAGTGGTAGAACCCTTACCTAACATCATGTGGCTGGGAGTT
CAATCTCCAAGTCAAAGCTATCACAGTCATCTGGAAGCCAGCAACTTGTCAAATCAGATC
TATAAACGCCAGCCCTGCCAGGCATGATGACACATTCTATTAATCCCAGCACGCAGGAGG
CAGACCAGCCTGCTCTACATAGTTCCAGGATAGCCAGAGCTATGTAGAAAGAAACTGAGG
TCCCAAAAAGCCATGCCACGACCAGGGTTCTTTTAAAGAG..........

No.	Exon / Intron	Start	End	Start Phase	End Phase	Length	Sequence
	5' upstream sequence						..........CATTGTGAAAGGTTTTGGGGGTGAAATTCTCATTTTTTTTTTCTATTGAG TAGAGACTAAAGAACCAAGAAAACAAGAGCTGGAAGGATAGCTCAGCAGTAAAGAGCACC TGCTGTTCTTGCATGTGATCTGAGTTTGGTTTCCAGCACCCACATGGTGACACACAGCCA ACCACTGGCATGCAGAAGGCACACATACATGCAGGCCAACCGTTCATGCATAAAAGTAAA ATAAATCTAAAGAAAAAAAGGATGCTCCCTGGAGACTTTGAAGAGCTCTGGCCCCACCTC CTGTATGATGAGACAACGTGGATCTGTGGTTCTGTGGAGTTCTATCTGTAGTGCTTTGTT CTGTAAGCCTAGGAAACATCCCCACCCTAAATAACTGTTGGTCAGCGCTGCTGAACATTG GGGGAGGGGGAGGGGGAGGGGGAGGGGGGAGGGGCGGCACTGAGCCACACGATGGTGGTA GGTGCCTCCCCCCCCCCACGTCCTTCACAGCTTCTACCCACAAATCAAGGACACTTTAAA TCCCTCTAAGTCCCATCCCTGAGCCTCCAGGCAGCTGCTCTCCACTGGCAGACAGGGATC TCTGGCTATGTGGCCAGGAATTCTGATATCTCAGAGTATGGTGGGGGTGGGGTAGGAGAG GGGTTGGTATCACAGTGGGGTCTGTGGATGGACCTGCCTTTCACGATGCAGCAGACCGGA CATAAGCTTGATTTCAACTTTAGGACATTAAAGAAAGTCACATCACGCGTGACTCGCAAG TTCAAGTGAAAAGGAGACATTAGGGGGTGCTACCAACCCTGACTCCAGAAGAGAATGAGG AGGCTGTCACTCTCCAAGGTCACCTGCCTGGCCCTAGAGTCCAAAGGTGAGTCGGGAGAG GAAGGGTGTGCAGACAGACGGCTCTAGCTCAAAGGCTTACTTCGAGGCGATCAGCCTGGA GGCTCCCCATTCTCTGCCCCTCCAGGTGTCCAATCCCACTTCTGCCACCC
1	EXON 1	49,248,045	49,248,294	-	1	250	AGTGCAAGGGGTTGGCGGGACCGGACTAAAGTTCAACTCTAGCGTCTTGGAGGGCGCGAC CTGGGTGTGGCTAGAGACAGCCACGCCTTCCAACGACCCGCCCCTCAATTAAGTCCCGCC CCCACCTCCGCAAGCTCCACAGAACACTGCGGAGCGCTCAGGATGCGCCGAACGTCTGCG ACCCTTCGGGGCCGAGCGAGGCCGCGGTGGCGTGCTGGGAACACAACGCCTGTCCCAGTG AACCAGACAG
	INTRON 1 - 2	49,240,672	49,248,044			7,373	GTGAGGGCTAGGGCCGCAGTTCTCA..........GCCTCACAGCCTCTTCTCTGTCCAG
2	EXON 2	49,240,483	49,240,671	1	1	189	GCACCTGTGCTCAGCTCCATCCCCCGCCTCAAGGCACCTTGCAAGTCGTCCGTGGAGATG GCACATCTCTGGGGACTGTGCTCATATTCCACTGCCCCTCTGGCCACCAGATGGTGGGGT CTGGCCTCCTCACTTGTGCCTGGAATGGGAGCACCGCTGACTGGTCTTCAGGAAGCCCTG TGTGCAAAG
	INTRON 2 - 3	49,238,937	49,240,482			1,546	GTAGGCCCCTCCTCCTTCCTGAGCT..........GAGCTTTGGTTTTTTTCCCTTGCAG
3	EXON 3	49,238,789	49,238,936	1	2	148	CTGTGCCACCGCATGAGACCTTCGGCTTTAAGGTGGCAGTGATCGCCTCCATTGTGAGCT GTGCCATCATCCTGCTCATGTCCATGGCCTTCCTCACCTGCTGCCTCCTCAAGTGTGTAC AGAAGAATGAGCGGCGGCGTGCTGACAG
	INTRON 3 - 4	49,237,613	49,238,788			1,176	GTACAGTGGCCTCATGTCCTTCCAG..........CTTCATCCTGAGCTCTCTCCTCCAG
4	EXON 4	49,237,424	49,237,612	2	2	189	GACGGCACAGCTCTGGTACCAGCTGAGAGGCGAGGACCTGGAGACGGTACAAGCTGCCTA CTTGGGCCTCAAGGGACACAACCACAATAACAGCAGCAGCGTCGGTGGTGGCAATGGTGG CCCCAGTGGTGGTGGCGGCAAGCCAGGAATTCAGCACAGCCAGGCCCATGACAACCACAG CTTCACCAC
	INTRON 4 - 5	49,231,332	49,237,423			6,092	GTAGGTTACCCTAGTCCTAAGGTGG..........CAGCTTATGCCTCTTCTTCCCACAG
5	EXON 5	49,230,690	49,231,331	2	-	642	AGACCCTGGTGACATCAGAGAGCAGGCTGGTGTGACCCACAGTGTGGACAAAGACCCTTG GACTTTCAGGATGGGAACTCCGGGCCCTGGTGGCTGCTCCAGCTCGCCAGGCACCTACGT GATGGTCCACGCGATGAACTCTGCAGGGCTGGCCCCTGGAAATCCTGGGAGGCCCAAAGT GTACCTTCCAGGGTGACCCCACTAGCCAGAGGTCTGCAAGTCAACGTTTGCCCAGCTGGA CATGGGCCAGGGCAGTCACCTCCAGGCATAGGGGGCCATCGGGAGCCTAGCTGACATTAA AGGCTGGGGCCCCAGCGGGGAGCAGTCTTTTCTAGAGGTCTCCTCTGTGGCTGTTACAGG ACCTGCTCAATGAACTGCTACTGGGGTGATGTCCCGAAGAAGTCACCACAACCAGGGTTC TTTTAGAGAGATTGAGACATTTTAAACAGATATAGTTTTGCATAGTAGACTATGAAAATA TTAATAAAGTACTTTCAGCAAAACAGGTAGCCACCTTATCATCTTCTGGGGCATGGACGC CCCGCCTGGAAGCCAGGACCCCCAGAACTTCATCTGTCAACTGTGGTGAGAGAAATGGAT GTGTTTTCTTTGCATAAAAACATAAAGTGGGGTTGGAAGTGC
	3' upstream sequence						ACCTCGGTTGGCAGAATGCTTGTGTATCTTGCAGAACAAGGCTTCAATCCCCAGCACCGT ACAAACCTATAATCCCAGTGCTTGGAAGGTAGCAGGAGGAGGAGGAGGATATGAATTTCA GGGTCATCCTGGGCTATGGGAAACCCTGTCGAAATAAATGAATTATAAACTCACTTTAAG GTAGAAACCACTGTCCCAGTTGGCCATCCCATCAAATCCTCGAATCCAGTTGTTATAAAA CCAGTCACATATTATCACCCCATGGAGCCCTGAGCTTGTTGGAGAGATGGGAGTCACTGA GCTCTGGTTACTCACAGGTCTGTGTTTGCTGCTGGCAGTCAGTGGAGACCTTCTGAAGCC TTAGTGGGAATAGTCTGCCTTCCACAGCCCCCCACCCCACCCCAGTATCTGCATAGCCTG GAGGCTGATTTCCAAGGTGAGATGTGATGTGAGTTCCAGATGGGAGCTGTTGCTTTACAG TCTTTTGCCTTGAAAGTCTCTCCCCCCCCCCCCATATTCTATTCATCAGGAAACCCCAGC TGGGCTTCACTGGTGTGGGAAAGCAGAAGTGACAGACATATTTTAAAGCCATCTGCTGGG TTTACAATCATAGTCCTAGCCACTCGTGAGGCTAAGGTAAAAAGATCACTTTTGAGCTGG AGGCTAGCCTACATAGCAAGACACCCCTCCCCCCCATCTCAAACAAACGAAAAAACCCAA CCTAAACCCCACCGCAGCTCAGTGGTAGAACCCTTACCTAACATCATGTGGCTGGGAGTT CAATCTCCAAGTCAAAGCTATCACAGTCATCTGGAAGCCAGCAACTTGTCAAATCAGATC TATAAACGCCAGCCCTGCCAGGCATGATGACACATTCTATTAATCCCAGCACGCAGGAGG CAGACCAGCCTGCTCTACATAGTTCCAGGATAGCCAGAGCTATGTAGAAAGAAACTGAGG TCCCAAAAAGCCATGCCACGACCAGGGTTCTTTTAAAGAG..........

Sequence Detail Report

Gene Symbol (Gene ID)	Susd3 (ENSMUSG00000021384)
Transcript ID	ENSMUST00000058196

		SNP Information
Strain :
Sequence Retrieve :
Exon translate : CDS Start ( 1 ) - End ( 270 ) -
Strand :	forward reverse
Show sequence :	nucleotide amino acid
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