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5' upstream sequence
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|
|
|
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..........GAGTCTGCATGAACTTGGTGTTCTGTGCGATGGATGGGTCACTCCTGTGT
CCAGTGCACCCCGCTCCAGCAGCGGCTTGTCTAGAAAAAGAACAGATGAAAAATTGAAGG
TAAGCAAAAAAACAAAACAAAACAAACAAAAAAAACCGCTCCTTTTTCTTGGGGGAAGGG
GGAGCGGGAGGCGGGTTTCATGTAGCCCAGGCTGGCTTCCAATTGGATGGAATGACCTTG
AACTTCTCTGATCCTCTACTCTCCACTTCAGAATGCTGGGATTACGGCCTAAGCAACACG
CGGGAATCGAACCCTGGGCGATCGAAGATCCCAGACAAGCACTGTGCCAACTGAGCTACG
TGCCCAGGTCCCCAGCGGACAGCTTCTCCTTCAGAACGTTTGGTCCTGGCTCAGCATACG
TACCGTCGGCGCCTGGGTTTAGCCGGACCCTCGCAGCCCGAGCCCCTGGAGGCAGCGCAC
GTCCGCTCGTCTCCGGAGGGCGGCGCACGCCGGGGAGGCTTGCCCCTCTCGGGGAGTCTC
CTCAGCCGGGTCCCGACACCAGGCCGTGAAGCCGCCGTCCCGTCCCGGGAGCGACGCCAT
CTTGTCGCCGCCGTCCTCCTCCGCGGCTCGCGCTCCCGGGCTCCAGGCTCCCCCTAACCC
CGCCGCGCGACACACGCGGCGGAGGAGGAGCGCTGGCTGCCGGCCACGCCTACCGGGCCC
GCAGCCGCGAGCGGGGCGGAGCCAGCCTCCGAGGCCGCGGCCTCCGGGCGCGGCCTGCAC
GGGCCCAGGCGCCTCCCCGAACCCGCCCGGCTGCGGCCCCCTAAAGGGCCCGACAAGCCG
AGTAGCGCTCCGCCTTCTCCGCCCCGCCGCCGCCGCCCCGGGAGCCCGGCCGCGGCCCCG
GCGCCGCCTCTTCCGCCTCCCGCGTCCGCGCGGGCGGGCCCGACGTCAGCGCCGCCCCGC
CCGGCCCAGCTTCGGCCTCGGCCTCGCAGAGCGCGGCGGCGGCGCAGGTC
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1
|
EXON 1
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48,967,355
|
48,968,017
|
- |
0 |
663
|
CCTCCCCAGACATGGCCCTGGGAGGCGGCAGCACATGGCGGCCGCGGCGGCCGTGAGCGC GCCCCCGGCCAGCCCCAGCCCGCCCTGAGGCTGCCCGCGCCCGCCGGCCGCGCCACGGCC CTGCCGCCCCCAGCCCCGCCGCCGCCGGCCCCGCCGCCGCCCGCGCGCGCGCGCCCCGCC GCCGCCGCCATGGGCGTGCAGGGCTTCCAGGACTACATCGAGAAGCACTGTCCGAGCGCC GTGGTGCCGGTGGAGCTGCAGAAGCTGGCCCGGGGCAGCCTGGTGGGCGGCGGGCGGCAG CGGCCCCCGCAGACCCCGCTGCGCCTGCTGGTGGATGCCGACAACTGCCTGCATCGCCTG TACGGTGGCTTCTACACCGACTGGGTGAGCGGCGGCCAGTGGAACCACATGCTCGGCTAC CTGGCGGCTCTGGCCAAGGCCTGCTTCGGAGGCAACATCGAGCTCTTCGTCTTCTTCAAT GGCGCGCTCGAGAAGGCCCGGCTGCACGAGTGGGTCAAGCGGCAGGGCAACGAGCGCCAG ACAGCGCAGCAGATCGTCAGCCATGTCCAGAACAAGGGCACGCCACCGCCCAAGGTCTGG TTCCTGCCTCCGGTCTGTATGGCCCACTGCATCCGCCTGGCGCTCATCCGCTTCCACGTC AAG
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|
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INTRON 1 - 2
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48,949,304
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48,967,354
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|
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18,051
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GTGCGGCTGCAGCCGGTTCGCCGGG..........CATCTCCTTCCTTTTCTGTGTGTAG |
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2
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EXON 2
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48,949,057
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48,949,303
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0 |
1 |
247
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GTTGCACAGAGCATTGAGGATCATCATCAAGAAGTGATTGGCTTCTGCAGAGAGAATGGT TTCCATGGCTTGGTGGCATATGACTCCGATTATGCACTGTGCAACATCCCCTACTACTTC AGTGCCCATGCCCTGAAACTGAGCCGCAACGGGAAGAGTCTCACCACAAGCCAGTATCTG ATGCACGAGGTTGCCAAGCAACTGGACCTGAACCCAAATCGTTTTCCTATTTTTGCTGCT CTGTTAG
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INTRON 2 - 3
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48,946,025
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48,949,056
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3,032
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GTAGGTGGAGTGGTACATAAGCACC..........TACATTATCTACATTTCTATTCTAG |
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3
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EXON 3
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48,945,942
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48,946,024
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1 |
0 |
83
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GAAATCACATACTACCTGATGAGGATCTGGCTTCCTTCCATTGGAGTTTACTTGGTCCAG AGCATCCACTCGCCTCACTGAAG
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INTRON 3 - 4
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48,934,079
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48,945,941
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11,863
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GTACAAACGTAGCTTGATTTTCTAG..........CTGACATGTGCATTTATCCTCTCAG |
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4
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EXON 4
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48,933,950
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48,934,078
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0 |
0 |
129
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GTCCGAGCCCACCAGCTGGTCTTGCCACCCTGTGATGTAGTGATCAAAGCCGTAGCTGAT TATGTTCGCAACATTCATGACACGTCTGACCTGGATGCCATAGCTAAAGATGTTTTCCAG CATTCACAG
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INTRON 4 - 5
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48,932,394
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48,933,949
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1,556
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GTAACACAAACTGAAAGGACAGGAT..........TAAGGCTTTCCTACATCTGTTTCAG |
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5
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EXON 5
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48,932,297
|
48,932,393
|
0 |
1 |
97
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TCAAGAACAGATGACAAAGTCATTCGGTTTAAGAGAGCAGTTGGATATTATTCAGCAACT AGCAAGCCCATGCCATTTCACCCACCACATTACTTAG
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INTRON 5 - 6
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48,922,251
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48,932,296
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|
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10,046
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GTAAGTAAGCAAAGCGGCCGTGTGA..........TTTTCTTCCTGTATTGATAAAACAG |
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6
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EXON 6
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48,922,153
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48,922,250
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1 |
0 |
98
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CCCGACCAAATCCATTTGGAATGCCTGGGATGGTGCCACCATATGTTCCCCCTCAGATGC TCAACATTCCACAGACTTCTCTGCAAGCAAAGCCCGCG
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INTRON 6 - 7
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48,921,966
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48,922,152
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|
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187
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GTAAGGTATCCTCTGAGTCAAGGTA..........CACTGACTTGTGTTCTGCACCTCAG |
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7
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EXON 7
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48,921,682
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48,921,965
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0 |
2 |
284
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GTCCCGCAGGTGCCCAGCCCAGGGGGCTCCCCAGGCCAGGCTCCATACCCATACAGCCTC TCTGAGCCAGCCCTCACCCTGGACACTAGCGGGAAGAACCTGACAGAGCAGAATAGCTAC AGCAACATTCCTCATGAGGGGAAGCACACACCGCTGTATGAGCGCTCCTCGCCCATCAAC CTGGCCCAGAGTGGCAGCCCCAATCACGTGGATTCTGCCTACTTCCCTGGCTCTTCTACA TCATCATCATCAGACAATGATGAGGGCGGCGGAGGGGCGACCAA
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INTRON 7 - 8
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48,914,950
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48,921,681
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6,732
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GTGAGTATTCAAGATCACAGAGTGC..........ATTGATCCTGTTCATTTGTGTTTAG |
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8
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EXON 8
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48,914,862
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48,914,949
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2 |
0 |
88
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CCACATCAGCGGGAACAAGATTGGCTGGGAGAAGACAGGAAGCCATGCAGAGCCACTGGC ACGGGGAGACCCAGGAGACCAAGTAAAG
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INTRON 8 - 9
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48,913,085
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48,914,861
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|
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1,777
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GTATAGAACCCGCACCTTCTATTAT..........CTACTTTTTGTCCTTTGCTCTGTAG |
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9
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EXON 9
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48,912,857
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48,913,084
|
0 |
0 |
228
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GTAGAAGGCTCATCCACTGCCTCTTCGGGGAGCCAGCTAGCTGAAGGCAAAGGGAGCCAT ATGGGCACTGTTCAACCAATCCCGTGCCTCCTGTCAATGCCAACTAGGAACCACATGGAT ATCACCACACCTCCATTGCCCCCTGTCGCACCTGAGGTGTTGAGAGTGGCTGAGCACAGA CACAAGAAGGGACTGATGTACCCCTACATCTTCCATATCCTGACAAAG
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INTRON 9 - 10
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48,910,431
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48,912,856
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2,426
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GTATTACCCAGGCTCCTTGAAGCAG..........TTATTCTGCTTTCTTCCATGCAAAG |
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10
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EXON 10
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48,910,256
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48,910,430
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0 |
1 |
175
|
GGTGAAATCAAAATTGCTGTTTCTATTGAAGATGAAGCCAACAAAGACCTGCCTCCGGCC GCCCTGCTCTATAGGCCAGTTCGTCAGTATGTTTACGGAGTCCTGTTTAGTTTGGCAGAA AGCAGAAAGAAAACTGAGAGACTTGCTTTTAGAAAGAACAGACTTCCACCAGAAT
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INTRON 10 - 11
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48,902,308
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48,910,255
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7,948
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GTATGTACTGTAACAATCCATTGTT..........GCCTCTTTGTGTTTTTCCTCTGCAG |
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11
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EXON 11
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48,902,058
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48,902,307
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1 |
2 |
250
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TCTCGCCACTGATCATTAAGGAGTGGGCAGCTTACAAGGGGAAATCTCCTCAGACCCCGG AACTAGTGGAAGCATTGGCCTTCCGGGAGTGGACCTGCCCCAACCTGAAGAGGCTTTGGC TGGGCAAGGCGGTGGAGGACAAGAACCGCCGGATGAGGGCCTTCCTGGCCTGCATGAGGT CTGATACCCCAGCCATGCTCAACCCTGCCAATGTGCCCACTCACCTCATGGTGCTCTGCT GCGTCTTACG
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INTRON 11 - 12
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48,897,775
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48,902,057
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4,283
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GTGAGTAACATGGGGCAGGGGCATA..........ATTTCACTCCTTCTGTTCCTCACAG |
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12
|
EXON 12
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48,897,660
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48,897,774
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2 |
0 |
115
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GTATATGGTGCAGTGGCCTGGAGCTCGCATTCTGCGAAGGCAGGAGCTGGATGCCTTCCT GGCTCAGGCATTGTCCCCCAAACTCTATGAGCCGGACCAGCTGCAGGAACTCAAG
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INTRON 12 - 13
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48,892,091
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48,897,659
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5,569
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GTACTGTCTGATCAGCCTTGTGTCC..........ATAAATTACTCTTTTCCATTAAAAG |
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13
|
EXON 13
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48,891,881
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48,892,090
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0 |
0 |
210
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ATTGACAACTTAGACCCGAGAGGAATTCAGCTGTCGGCTCTCTTCATGAGTGGAGTAGAC ATGGCACTGTTTGCTAATGACGCATGTGGACAGCCCATCCCCTGGGAACACTGTTGTCCT TGGATGTATTTCGATGGGAAGCTCTTCCAGTCCAAACTTCTTAAAGCCAGCAGGGAGAAG ACCCCACTCATCGACCTCTGTGATGGTCAG
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INTRON 13 - 14
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48,889,939
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48,891,880
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|
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1,942
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GTATGTCGGGGACAGGGCAGCCATC..........TTTACTGTGTGTCCATTGACTTCAG |
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14
|
EXON 14
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48,889,755
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48,889,938
|
0 |
1 |
184
|
GCGGAGCAGGCTGCCAAGGTGGAGAAGATGCGCCAGAGCATCCTGGAGGGCCTCAGCTTC TCCCGGCAAAACCACCCACTGCCCTTCCCACCGCCTCCTGCTCTGCCCTTCTACCCAGCC TCTGTATACCCTCGGCACTTTGGGCCAGTCCCACCCTCACAGGGCAGGGGCAGGGGCTTT GCAG
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INTRON 14 - 15
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48,889,262
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48,889,754
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493
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GTGAGTCATATTTCAGAAATCTTTC..........CTGTTTTTCTCCACTTTGGATACAG |
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15
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EXON 15
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48,889,124
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48,889,261
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1 |
1 |
138
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GAGTCTGTGGCTTCGGAGGCCATTATGGGGAAACAGTAGCAACAGGCCCTTACCGTGCCT TCCGGGTGACGGCAGCATCAGGACACTGTGGAGCCTTCTCAGGCAGTGACAGCAGCAGGA CTAGCAAGTCCCAGGGCG
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INTRON 15 - 16
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48,885,879
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48,889,123
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3,245
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GTAATTATTACCACACCCACACCCC..........GTTTTTTGTTTTGTCTTTTGTGCAG |
|
16
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EXON 16
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48,885,737
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48,885,878
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1 |
2 |
142
|
GAGTCCAACCTATTCCTTCTCAGGGAGGGAAGCTAGAAATAGCTGGCACTGTGGTCGGCC ACTGGGCTGGGAGCAGACGGGGCCGTGGGGGCCGAGGGCCCTTCCCTCTGCAGGTGGTGT CTGTGGGAGGACCAGCGCGAGG
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INTRON 16 - 17
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48,885,370
|
48,885,736
|
|
|
367
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GTAAGCTCTGGGCTGGGCTGCTGGA..........CTCTTGTTTTCCTGTATTGACCCAG |
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17
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EXON 17
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48,885,273
|
48,885,369
|
2 |
0 |
97
|
GCGTCCAAGGGGTGTTATTTCCACTCCGGTGATTAGAACGTTTGGAAGAGGTGGAAGGTA CTACGGCAGAGGCTACAAAAGCCAGGGAGCAATTCAG
|
|
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INTRON 17 - 18
|
48,881,096
|
48,885,272
|
|
|
4,177
|
GTAATGCCCTCACAGTCCTTTCACT..........CTCTTGTTACTCTCCTTCCCCACAG |
|
18
|
EXON 18
|
48,879,219
|
48,881,095
|
0 |
- |
1,877
|
GGCAGGCCTCCTTATGCTGCTTCAGCAGAAGAAGTGGCCAAAGAACTGAAGTCGAAATCT GGGGAATCCAAGTCCTCTGCTGTGTCCCTGGCTGAAAACGGAGTGATGGCCGAGGAGAAG CCAGTGCCCCAACTTAATGGGAGCACGGGTGACCCCAGAGTCCCCAGCCACTCTGAAAGT GCCTTGAATAATGACTCTAAACCGTGCAATACAAATCCTCACTTAAATGCACTAAGTACA GACAGCGCCTGCCGCAGGGAGGCTGCTCTGGAGGCAGCTGTCTTAAATAAAGAAGAGTAA ACTTATTTTTTATAGAGGGTGAAGGATGCTGGAAGGGTAAGGATTCAGGAGCATCTGGAG AGAGAGCCTGCAGTTATGTACATTTTGTCCTTTCCGTAAGAGAAAATGAGGACTTTGGAA ATTCAGATCCCTCTTTGATATCAGAGATATAAACAACACATTTTTTTTTTTTTTTTTAGT TTTAACCAGTTGTAGTCAAAATGCTACAATAAAACAAAAAAGAGAAAGAAAATGAAGAGC ATTTGACTCCCGCACTTAAAAATGAAGTACACAAAGTTCAAACTGGTTACGACAAAAGCC TAGAGTTGTGTTTCTTGAACTATAAAGAAAACAAATTTTGGCAGTGTTTAAGTATATATA GCTTAAAATATAATTTTTAGCATTTGGCACCATATGTATGCCACTATATTTGATTTTGCA TTACTGTTTCACAATGAAGCTGTGTTTTGAGGCTTTGATTTATGATTATGAGAGAAGTAA GGCACAACCACAGTTTCTTTCTTACTTAAATCTCATCACTGTTGATGTGGTTCTTTTGTG TTAAAAAAAGTGCAACTATCAAAACTAAAAAAATTATAGATTAAACTGCTGTTGTGCTGA TTTTGAATACACAGTACATCATACATCCTTTACAAGCAAGTTCAATGGAGATTACGTTGA AATCATAGAAGATGCAAATGACCTTTCAAAGTCAACACAATGTGTTCTGAAACCTCGTGA CTAATACCATGCATCTGTGATCAGTGAGCTACGTGGTTTTGAATCGGACGTAGACCATTA GTGCTACTACTTGAGCTAATCTTCTGCATGGTTCATAATTTTTAAAGTGTGTAGTTAATA TTATGCATGTTATTGTCCTTTCTTCCATTCTTACCAGTATGTGCCCATTTGCAAAACAAA ATGCTAATAATCAGTAATAGTCCTATAAAAGATGTTAACTCTGTTTAGTCATTGACTGAT CTTGCTCTAACCTTAAAATTTTGTGATTATTGACCTCTGTTGCATTTATTCTAAACCCCC CAAAATTATCTAGCCGTTTGGAATATCAACATTACCCTGGTGTACTCACTGCTGTGTGCA TTATTGTTCTTTGTTGCTGTTTTATGCCTTCATATTCATATTAGCAAAATATGAAATTCT GTAAAGAAAGAAACCCCCTATGATCTTAAAAAACAAAACACCCCCTTCCCCTTCTGTAGC AGGAAACAAATTGCTTGTTCTTGAGAAGTGTCCCATCAGGAACTTAGTAGAAGCAGGTAG ACTTCGATCATTTTGATGTTTTGTTACTGTTTCCAAACAATGTACTTTGAATCAGAATCA CTTCTTATGTTTCATCTACTTCCGATGCTCTTCATCACATTAGTGATCAGAAATGAGGTG TAACTCCCCAGCCCCTGCCCGCAAGAGCTAAGTAGGACCTCACTGTAAGTTGAAGGGAGT TCCGCCCTAACTCATGGATTGTGAAGAATGAACTGCTGTTGGGTCTGATTGACTGTTGAT GGATTGTGGTGTGGTTTATCCAGAGGCTATTGAATGCAACTTACAATGCTTAATAAAAAT CTTTATTCTTTTAGTAT
|
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3' upstream sequence
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|
|
|
|
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AAAGTATGGTGTGGCTTTTAAATTCACTTGTAAAGTATGAATTTTACAGAGGTTTAAATT
TAGGTAGCTCATGAAGAGCTCCATAAGACAACATTAAGTTTAGAATTACCAAGCCCTGTC
AAAGTAATTTTAGAGGAACCTTAATGGTTAATATGAAAATTATGCAGAGCACAGCTTTTG
CGTTCCTCTGACCAATCAGGCTGCGAAGTACAAAGTAGCTTTATAAAGGCCTAACGGGGA
AATCTTTGTTTTTAAATGTAGAGTTACAAGTGTCGCTGCCCTTTGGCTGGTTCTCTGCAG
CCTAGTTCAAGCGTGCCCAGCAAAGCGGCCAAGGAGCTACTGGAGCGCCTGCTCCGAGCA
GAGGACGCGTGCTTTACGGGCGGGGGCGATTGTGCAGCAGATGCGCGCGCATCTCGGGGC
GGAGCCGAACCATACCCAAAGCCACTGGCTTCTTACGCTGCAGCGCCAGGGCGGAACCAC
GTGACGAGTCCCGAGACTGCGCCTGCTCGGTCTGTCAGGCTCACGGCTTAAAGAGCCGCG
TCTGGGACCTTGCGCAGGCTGGTTCCCGCTGCCTCGCGGCCTTCATAGGCCCTACGAATG
ATCGGAGGCTCAGCCACAGGGCTCTGGCCAACCCCACCGGCGTGCGCCTACTGTATTGTG
GCTTCCAAATTACGGAGGAGATAACCTCTTGTCCGATTTTGCTAATTTGGTCTCCAGGGT
CTCGGTGAGAGTGAAACTTGGTACTGCTGTCCACAACAAGCCCCCAGAACCTTTGGCTGT
GTTTGGTAGCCAGGCCTGTATCATCTTAGAAAACCCACGGTCCCAGGGAAGACTGGCCAC
TCTGGAGCCCAAAAGAATGTCCCAGCAACTGGAGTACAGAAAACTTTTATTCTGAAAATA
CCTTCTCCCATGGCACCCTCATAGGGTCTCCCCCTTACCCCCTCAGTAACAGTCACAAAC
CTTATTATTCTGGATCTTCAGACCGCCTTACTTGGGGACA..........
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