MoG+ -Mouse Genome database with high added value-

Target CDS Information

Gene Symbol (Gene ID)

Pcmtd1 (ENSMUSG00000051285)

Cross Reference

CCDS	CCDS35508.1
EMBL	AK166593, AK168606, AK168705, ...show all
Fantom	I0C0032I24, I920038A18, I920046H10
GO	GO:0003674, GO:0004719, GO:0005575, ...show all
goslim_goa	GO:0003674, GO:0005575, GO:0005622, ...show all
MGI_trans_name	Pcmtd1-001
OTTP	OTTMUSP00000063586
OTTT	OTTMUST00000113805
protein_id	AAH52741.1, AAI10361.1, AAI17942.1, ...show all
RefSeq_mRNA	NM_183028.3

RefSeq_peptide	NP_898849
UCSC	uc007agb.1
UniParc	UPI000019B09C
Uniprot/SPTREMBL	Q3TGS5
Uniprot/SWISSPROT	P59913
Vega_transcript	OTTMUST00000113805, Pcmtd1-001
Vega_translation	178652, OTTMUSP00000063586

Definition

protein_id:ENSMUSP00000059261
translation:

MGGAVSAGEDNDDLIDNLKEAQYIRTERVEQAFRAIDRGDYYLEGYRDNAYKDLAWKHGN
IHLSAPCIYSEVMEALKLQPGLSFLNLGSGTGYLSTMVGLILGPFGINHGIELHSDVVEY
AKEKLESFIKNSDSFDKFEFCEPAFVVGNCLQIASDSHQYDRIYCGAGVQKDHENYMKIL
LKVGGILVMPIEDQLTQIMRTGQNTWESKNILAVSFAPLVQPSKNDNGTPDSVGLPPCAV
RNLQDLARIYIRRTLRNFINDEMQAKGIPQRAPPKRKRKRVKQRINTYVFVGNQLIPQPL
DSEEDEKMEEDSKEEEEKEHIEAMKREEPPQNLLREKIMKLPLPESLKAYLTYFRDK

Chromosome

Length
Position(start - end)

49572
7120309 - 7169882

Orient to Chromosome

plus

Link

Location : (1:7120309-7169882)
/

Detail Map

name	Pcmtd1 (ENSMUSG00000051285)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : Pcmtd1 note : protein-L-isoaspartate (D-aspartate) O- methyltransferase domain containing 1 [Source:MGI Symbol;Acc:MGI:2441773]

name	Gm26983 (ENSMUSG00000098201)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : Gm26983 note : predicted gene, 26983 [Source:MGI Symbol;Acc:MGI:5504098]

name	Gm38372 (ENSMUSG00000103509)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : Gm38372 note : predicted gene, 38372 [Source:MGI Symbol;Acc:MGI:5611600]

name	Pcmtd1 (ENSMUSG00000051285)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000061280

name	Pcmtd1 (ENSMUSG00000051285)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000182114

name	Pcmtd1 (ENSMUSG00000051285)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000182675

name	Pcmtd1 (ENSMUSG00000051285) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS35508.1 Uniprot/SWISSPROT:P59913 RefSeq_peptide:NP_898849 RefSeq_mRNA:NM_183028.3 Vega_transcript:OTTMUST00000113805 Vega_transcript:Pcmtd1-001 Uniprot/SPTREMBL:Q3TGS5 UCSC:uc007agb.1 Fantom:I0C0032I24 Fantom:I920038A18 Fantom:I920046H10 EMBL:AK166593 EMBL:AK168606 EMBL:AK168705 EMBL:BC052741 EMBL:BC110360 EMBL:BC117941 EMBL:BC117942 EMBL:CH466536 GO:GO:0003674 GO:GO:0004719 GO:GO:0005575 GO:GO:0005737 GO:GO:0006479 GO:GO:0008150 MGI_trans_name:Pcmtd1-001 Vega_translation:178652 Vega_translation:OTTMUSP00000063586 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005737 goslim_goa:GO:0006464 goslim_goa:GO:0008150 goslim_goa:GO:0008168 protein_id:AAH52741.1 protein_id:AAI10361.1 protein_id:AAI17942.1 protein_id:AAI17943.1 protein_id:BAE38879.1 protein_id:BAE40473.1 protein_id:BAE40547.1 protein_id:EDL14266.1 OTTP:OTTMUSP00000063586 OTTT:OTTMUST00000113805 UniParc:UPI000019B09C
definition	note : transcript_id=ENSMUST00000061280 protein_id : ENSMUSP00000059261 translation : MGGAVSAGEDNDDLIDNLKEAQYIRTERVEQAFRAIDRGDYYLEGYRDNAYKDLAWKHGNIHLSAPCIYSEVMEALKLQPGLSFLNLGSGTGYLSTMVGLILGPFGINHGIELHSDVVEYAKEKLESFIKNSDSFDKFEFCEPAFVVGNCLQIASDSHQYDRIYCGAGVQKDHENYMKILLKVGGILVMPIEDQLTQIMRTGQNTWESKNILAVSFAPLVQPSKNDNGTPDSVGLPPCAVRNLQDLARIYIRRTLRNFINDEMQAKGIPQRAPPKRKRKRVKQRINTYVFVGNQLIPQPLDSEEDEKMEEDSKEEEEKEHIEAMKREEPPQNLLREKIMKLPLPESLKAYLTYFRDK

name	Pcmtd1 (ENSMUSG00000051285) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000113813 Vega_transcript:Pcmtd1-006 Uniprot/SPTREMBL:S4R2K3 UCSC:uc007agc.1 EMBL:AC102777 EMBL:AC157797 EMBL:AC171270 EMBL:AC171328 GO:GO:0003674 GO:GO:0004719 GO:GO:0005575 GO:GO:0006479 GO:GO:0008150 MGI_trans_name:Pcmtd1-006 Vega_translation:178653 Vega_translation:OTTMUSP00000063588 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0006464 goslim_goa:GO:0008150 goslim_goa:GO:0008168 OTTP:OTTMUSP00000063588 OTTT:OTTMUST00000113813 UniParc:UPI000333537A
definition	note : transcript_id=ENSMUST00000182114 protein_id : ENSMUSP00000138680 translation : MKILLKVGGILVMPIEDQLTQIMRTGQNTWESKNILAVSFAPLVQPSKNDNGTPDSVGLPPCAVRNLQDLARIYIRRTLRNFINDEM

name	Pcmtd1 (ENSMUSG00000051285) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000113809 Vega_transcript:Pcmtd1-002 Uniprot/SPTREMBL:S4R1A9 GO:GO:0003674 GO:GO:0004719 GO:GO:0005575 GO:GO:0006479 GO:GO:0008150 MGI_trans_name:Pcmtd1-002 Vega_translation:178654 Vega_translation:OTTMUSP00000063587 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0006464 goslim_goa:GO:0008150 goslim_goa:GO:0008168 OTTP:OTTMUSP00000063587 OTTT:OTTMUST00000113809 UniParc:UPI000333527B
definition	codon_start : 3 note : transcript_id=ENSMUST00000182675 protein_id : ENSMUSP00000138149 translation : XPFGINHGIELHSDVVEYAKEKLESFIKNSDSFDNQLLDLDYPSKREATGQG

name
type	misc_feature
link
xref
definition	note : contig AC102777.12 4687..195874(1)

name
type	misc_feature
link
xref
definition	note : contig AC157797.5 1..34462(-1)

name
type	misc_feature
link
xref
definition	note : contig AC171270.4 1..6011(-1)

name
type	misc_feature
link
xref
definition	note : contig AC171328.2 2006..41955(1)

name	Pcmtd1 (ENSMUSG00000051285)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000113808 Vega_transcript:OTTMUST00000113808 MGI_trans_name:Pcmtd1-003 OTTT:OTTMUST00000113808
definition	note : processed_transcript note : transcript_id=ENSMUST00000182306

name	Pcmtd1 (ENSMUSG00000051285)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000113814 Vega_transcript:OTTMUST00000113814 MGI_trans_name:Pcmtd1-008 OTTT:OTTMUST00000113814
definition	note : processed_transcript note : transcript_id=ENSMUST00000182823

name	Pcmtd1 (ENSMUSG00000051285)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000113815 Vega_transcript:OTTMUST00000113815 MGI_trans_name:Pcmtd1-007 OTTT:OTTMUST00000113815
definition	note : retained_intron note : transcript_id=ENSMUST00000182388

name	Pcmtd1 (ENSMUSG00000051285)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000113810 Vega_transcript:OTTMUST00000113810 MGI_trans_name:Pcmtd1-004 OTTT:OTTMUST00000113810
definition	note : retained_intron note : transcript_id=ENSMUST00000182892

name	Pcmtd1 (ENSMUSG00000051285)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000113811 Vega_transcript:OTTMUST00000113811 MGI_trans_name:Pcmtd1-005 OTTT:OTTMUST00000113811
definition	note : retained_intron note : transcript_id=ENSMUST00000183204

name	Gm26983 (ENSMUSG00000098201)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000114182 Vega_transcript:OTTMUST00000114182 Clone_based_vega_transcript:RP24-149G24.1-001 MGI_trans_name:Gm26983-001 OTTT:OTTMUST00000114182
definition	note : processed_pseudogene note : transcript_id=ENSMUST00000182051

name	Gm38372 (ENSMUSG00000103509)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000113816 Vega_transcript:OTTMUST00000113816 Clone_based_vega_transcript:WI1-817D1.2-001 MGI_trans_name:Gm38372-001 OTTT:OTTMUST00000113816
definition	note : TEC note : transcript_id=ENSMUST00000194854

Polymorphisms Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Pcmtd1 (ENSMUSG00000051285)
Transcript ID	ENSMUST00000061280

Reports
substitution
cSNPs	8
Insertion	56
Deletion	78
SNPs	-1kb 7086209(c.-34100A>G), 7086432(c.-33877T>C), 7086525(c.-33784C>T), 7086971(c.-33338C>T), 7087347(c.-32962T>C), 7087348(c.-32961G>A), 7087659(c.-32650A>G), 7087869(c.-32440C>T), 7087871(c.-32438C>T), 7087928(c.-32381C>G), 7088037(c.-32272G>C), 7088148(c.-32161C>T), 7088236(c.-32073A>G), 7088436(c.-31873T>G), 7088537(c.-31772C>T), 7088604(c.-31705G>A), 7088613(c.-31696C>T), 7088624(c.-31685A>C), 7088662(c.-31647T>C), 7088882(c.-31427C>T), 7088911(c.-31398C>A), 5'UTR CDS 7160910(c.429C>T), 7169516(c.708T>C), 7169519(c.711A>G), 7169552(c.744C>T), 7169651(c.843T>C), 7169765(c.957G>A), 7169770(c.962T>G), 7169864(c.1056A>G), 3'UTR 7089108(c.-224C>T), 7169935(c.53G>C), 7170103(c.221T>C), 7170304(c.422T>C), 7170328(c.446A>G), 7170330(c.448T>C), 7170675(c.793C>T), 7170773(c.891A>G), 7170907(c.1025C>T), 7170949(c.1067A>G), 7171025(c.1143T>C), 7171065(c.1183A>T), 7171074(c.1192C>T), 7171220(c.1338C>G), 7172300(c.2418C>G), 7172504(c.2622C>T), 7172784(c.2902T>C), 7173006(c.3124T>G), 7173061(c.3179A>G), 7173231(c.3349A>G), 7173317(c.3435C>A), 7173347(c.3465T>C), 7173379(c.3497C>T), 7173624(c.3742G>C), INTRON 7089548(c.-116+332C>T), 7089689(c.-116+473C>A), 7089805(c.-116+589A>T), 7090114(c.-116+898G>C), 7090420(c.-116+1204T>C), 7090978(c.-116+1762C>T), 7090991(c.-116+1775G>A), 7091021(c.-116+1805C>A), 7091261(c.-116+2045G>A), 7091720(c.-116+2504C>T), 7091930(c.-116+2714A>G), 7092050(c.-116+2834A>G), 7092374(c.-116+3158A>C), 7092467(c.-116+3251C>T), 7092759(c.-116+3543T>C), 7092816(c.-116+3600T>C), 7093145(c.-116+3929C>T), 7093431(c.-116+4215C>A), 7094141(c.-116+4925A>G), 7094408(c.-116+5192A>G), 7094539(c.-116+5323G>A), 7094663(c.-116+5447G>A), 7094751(c.-116+5535C>T), 7094755(c.-116+5539C>A), 7094794(c.-116+5578T>A), 7095283(c.-116+6067C>T), 7095593(c.-116+6377T>C), 7095776(c.-116+6560C>T), 7095855(c.-116+6639C>A), 7095894(c.-116+6678G>A), 7095995(c.-116+6779T>C), 7096155(c.-116+6939A>T), 7096215(c.-116+6999G>T), 7096561(c.-116+7345C>T), 7096592(c.-116+7376T>C), 7096603(c.-116+7387A>T), 7096636(c.-116+7420G>A), 7097027(c.-116+7811A>G), 7097111(c.-116+7895G>C), 7097126(c.-116+7910G>A), 7097361(c.-116+8145G>A), 7097362(c.-116+8146T>A), 7097674(c.-116+8458T>G), 7097853(c.-116+8637T>A), 7098064(c.-116+8848G>A), 7098274(c.-116+9058G>C), 7099034(c.-116+9818G>T), 7099096(c.-116+9880G>A), 7099216(c.-116+10000C>T), 7099242(c.-116+10026A>G), 7099254(c.-116+10038C>G), 7099337(c.-116+10121G>T), 7099358(c.-116+10142A>G), 7099741(c.-116+10525G>T), 7099758(c.-116+10542G>A), 7099764(c.-116+10548G>C), 7100148(c.-116+10932G>A), 7100181(c.-116+10965T>C), 7100290(c.-116+11074T>C), 7100300(c.-116+11084G>T), 7100541(c.-116+11325G>A), 7100615(c.-116+11399A>G), 7100669(c.-116+11453G>A), 7100823(c.-116+11607C>T), 7101183(c.-116+11967A>T), 7102615(c.-116+13399C>A), 7102671(c.-116+13455A>G), 7102674(c.-116+13458A>C), 7102823(c.-116+13607C>G), 7102826(c.-116+13610A>G), 7102867(c.-116+13651C>T), 7102874(c.-116+13658C>G), 7102970(c.-116+13754G>T), 7103158(c.-116+13942G>A), 7103161(c.-116+13945G>T), 7103443(c.-116+14227G>A), 7103552(c.-116+14336A>C), 7103591(c.-116+14375C>T), 7103622(c.-116+14406A>G), 7103761(c.-116+14545C>T), 7103979(c.-116+14763C>G), 7104032(c.-116+14816T>A), 7104083(c.-116+14867G>T), 7104089(c.-116+14873T>G), 7104095(c.-116+14879A>T), 7104169(c.-116+14953G>C), 7104222(c.-116+15006T>G), 7104315(c.-116+15099C>T), 7104597(c.-116+15381C>A), 7104643(c.-116+15427T>G), 7104744(c.-115-15450G>C), 7104838(c.-115-15356G>A), 7104866(c.-115-15328G>T), 7104890(c.-115-15304C>T), 7105514(c.-115-14680G>A), 7105531(c.-115-14663T>C), 7105549(c.-115-14645C>A), 7105810(c.-115-14384T>G), 7105840(c.-115-14354C>T), 7105888(c.-115-14306T>G), 7106232(c.-115-13962C>G), 7106242(c.-115-13952C>T), 7106257(c.-115-13937C>T), 7106327(c.-115-13867A>G), 7106347(c.-115-13847C>T), 7106391(c.-115-13803G>A), 7106404(c.-115-13790G>A), 7106446(c.-115-13748C>T), 7106461(c.-115-13733A>T), 7106487(c.-115-13707G>A), 7106585(c.-115-13609T>C), 7106606(c.-115-13588G>T), 7106615(c.-115-13579A>G), 7106693(c.-115-13501T>C), 7106864(c.-115-13330G>A), 7106876(c.-115-13318G>A), 7106878(c.-115-13316T>A), 7106948(c.-115-13246T>C), 7106987(c.-115-13207A>G), 7107072(c.-115-13122G>A), 7107080(c.-115-13114A>T), 7107105(c.-115-13089G>T), 7107148(c.-115-13046T>C), 7107207(c.-115-12987G>A), 7107311(c.-115-12883T>G), 7107376(c.-115-12818C>T), 7107378(c.-115-12816A>G), 7107474(c.-115-12720T>C), 7107494(c.-115-12700C>A), 7107496(c.-115-12698G>A), 7107657(c.-115-12537T>C), 7107734(c.-115-12460T>A), 7107878(c.-115-12316A>G), 7107968(c.-115-12226T>C), 7108249(c.-115-11945T>C), 7108716(c.-115-11478G>A), 7108719(c.-115-11475A>G), 7108828(c.-115-11366A>G), 7108860(c.-115-11334T>C), 7108895(c.-115-11299G>C), 7108899(c.-115-11295G>A), 7108952(c.-115-11242A>G), 7108971(c.-115-11223C>T), 7108976(c.-115-11218C>T), 7108978(c.-115-11216T>C), 7109035(c.-115-11159G>A), 7109079(c.-115-11115C>A), 7109084(c.-115-11110A>G), 7109165(c.-115-11029T>G), 7109255(c.-115-10939C>T), 7109256(c.-115-10938A>G), 7109336(c.-115-10858T>C), 7109380(c.-115-10814A>G), 7109433(c.-115-10761A>G), 7109436(c.-115-10758G>A), 7109516(c.-115-10678G>A), 7109560(c.-115-10634T>A), 7109866(c.-115-10328A>G), 7110024(c.-115-10170T>A), 7110029(c.-115-10165C>G), 7110067(c.-115-10127T>C), 7110291(c.-115-9903C>T), 7110293(c.-115-9901G>A), 7110316(c.-115-9878G>C), 7110789(c.-115-9405T>C), 7110812(c.-115-9382G>C), 7111378(c.-115-8816T>C), 7111519(c.-115-8675C>T), 7111552(c.-115-8642A>G), 7111560(c.-115-8634T>C), 7111798(c.-115-8396C>T), 7111802(c.-115-8392C>T), 7112130(c.-115-8064G>C), 7112196(c.-115-7998G>C), 7112271(c.-115-7923G>T), 7112805(c.-115-7389C>T), 7113083(c.-115-7111G>A), 7113090(c.-115-7104T>A), 7113205(c.-115-6989G>C), 7113233(c.-115-6961C>T), 7113311(c.-115-6883A>T), 7113452(c.-115-6742G>C), 7113491(c.-115-6703A>G), 7113687(c.-115-6507G>A), 7113813(c.-115-6381G>A), 7113927(c.-115-6267T>G), 7114100(c.-115-6094A>G), 7114125(c.-115-6069C>A), 7114207(c.-115-5987T>C), 7114374(c.-115-5820C>T), 7115916(c.-115-4278T>C), 7115987(c.-115-4207G>T), 7116064(c.-115-4130T>C), 7116135(c.-115-4059A>G), 7116325(c.-115-3869G>C), 7116332(c.-115-3862T>C), 7116359(c.-115-3835A>G), 7116618(c.-115-3576G>A), 7116816(c.-115-3378A>G), 7116930(c.-115-3264A>G), 7116944(c.-115-3250A>C), 7117022(c.-115-3172C>G), 7117607(c.-115-2587C>A), 7118309(c.-115-1885C>G), 7118425(c.-115-1769C>T), 7119494(c.-115-700C>T), 7119506(c.-115-688G>C), 7119508(c.-115-686A>T), 7119572(c.-115-622C>T), 7119574(c.-115-620C>T), 7119665(c.-115-529A>G), 7120022(c.-115-172T>C), 7121051(c.307+436T>C), 7121145(c.307+530T>C), 7121205(c.307+590T>C), 7121305(c.307+690A>G), 7121336(c.307+721T>G), 7121444(c.307+829A>G), 7121601(c.307+986A>G), 7121637(c.307+1022G>T), 7121676(c.307+1061G>A), 7121828(c.307+1213G>T), 7122337(c.307+1722C>T), 7122378(c.307+1763G>T), 7122451(c.307+1836G>A), 7122518(c.307+1903A>C), 7122608(c.307+1993T>G), 7122613(c.307+1998C>T), 7122972(c.307+2357T>C), 7123186(c.307+2571T>C), 7123224(c.307+2609T>A), 7123234(c.307+2619C>T), 7123253(c.307+2638C>T), 7123294(c.307+2679C>T), 7123310(c.307+2695G>T), 7123411(c.307+2796A>G), 7123484(c.307+2869C>G), 7123506(c.307+2891A>G), 7123524(c.307+2909T>C), 7123532(c.307+2917G>A), 7123572(c.307+2957T>A), 7124953(c.307+4338G>C), 7124989(c.307+4374T>C), 7125004(c.307+4389A>G), 7125109(c.307+4494C>G), 7125234(c.307+4619G>A), 7125453(c.307+4838G>A), 7125619(c.307+5004T>C), 7125656(c.307+5041G>A), 7125692(c.307+5077G>A), 7125706(c.307+5091T>G), 7125742(c.307+5127G>A), 7125822(c.307+5207A>T), 7126013(c.307+5398C>T), 7126063(c.307+5448G>A), 7126102(c.307+5487A>G), 7126132(c.307+5517T>A), 7126148(c.307+5533A>C), 7126283(c.307+5668T>A), 7126321(c.307+5706C>T), 7126370(c.307+5755C>G), 7126386(c.307+5771C>G), 7126448(c.307+5833G>T), 7126456(c.307+5841G>A), 7126491(c.307+5876G>T), 7126532(c.307+5917C>T), 7126576(c.307+5961G>A), 7126627(c.307+6012C>G), 7126633(c.307+6018A>G), 7126658(c.307+6043G>A), 7126706(c.307+6091T>C), 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7148481(c.410+742G>A), 7148484(c.410+745C>T), 7148560(c.410+821G>A), 7148740(c.410+1001G>A), 7148821(c.410+1082A>T), 7148824(c.410+1085A>G), 7149826(c.410+2087G>A), 7149958(c.410+2219A>G), 7150560(c.410+2821G>C), 7150569(c.410+2830T>C), 7150769(c.410+3030C>G), 7151471(c.410+3732G>A), 7151636(c.410+3897G>A), 7151637(c.410+3898G>A), 7151681(c.410+3942G>A), 7151914(c.410+4175G>A), 7151991(c.410+4252C>T), 7152014(c.410+4275A>G), 7152149(c.410+4410T>C), 7152234(c.410+4495G>A), 7152303(c.410+4564T>C), 7152358(c.410+4619C>T), 7152414(c.410+4675T>C), 7152495(c.410+4756G>A), 7152515(c.410+4776C>T), 7152841(c.410+5102T>G), 7153453(c.410+5714T>C), 7153503(c.410+5764G>T), 7153663(c.410+5924T>C), 7153664(c.410+5925C>A), 7153706(c.410+5967C>T), 7153720(c.410+5981A>G), 7153753(c.410+6014C>T), 7153758(c.410+6019C>T), 7154208(c.410+6469C>T), 7154287(c.410+6548T>C), 7154575(c.411-6317A>T), 7154754(c.411-6138G>T), 7155288(c.411-5604G>A), 7155328(c.411-5564A>T), 7155367(c.411-5525G>A), 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7160045(c.411-847G>T), 7160166(c.411-726T>G), 7160285(c.411-607A>G), 7160321(c.411-571C>T), 7160399(c.411-493T>C), 7160421(c.411-471T>A), 7160519(c.411-373A>G), 7160546(c.411-346C>T), 7160664(c.411-228T>C), 7160669(c.411-223T>C), 7160710(c.411-182T>C), 7161081(c.582+18C>A), 7161147(c.582+84T>C), 7161184(c.582+121A>G), 7161262(c.582+199T>C), 7161288(c.582+225C>A), 7161469(c.582+406G>A), 7161505(c.582+442A>G), 7161533(c.582+470G>C), 7161567(c.582+504T>C), 7161571(c.582+508T>A), 7161578(c.582+515G>T), 7161782(c.582+719A>T), 7161824(c.582+761A>G), 7161863(c.582+800T>C), 7161948(c.582+885G>A), 7161999(c.582+936G>A), 7162009(c.582+946T>C), 7162926(c.583-322A>T), 7162939(c.583-309G>A), 7163060(c.583-188A>G), 7163061(c.583-187G>A), 7163062(c.583-186C>A), 7163086(c.583-162C>T), 7163124(c.583-124A>G), 7163179(c.583-69A>G), 7163198(c.583-50T>A), 7163557(c.706+186C>T), 7163713(c.706+342C>A), 7164043(c.706+672G>C), 7164119(c.706+748C>T), 7164121(c.706+750T>A), 7164157(c.706+786C>T), 7164223(c.706+852G>A), 7164760(c.706+1389C>T), 7164785(c.706+1414T>G), 7164824(c.706+1453C>A), 7164844(c.706+1473C>T), 7164921(c.706+1550G>C), 7164951(c.706+1580C>T), 7164957(c.706+1586A>G), 7164988(c.706+1617C>T), 7165022(c.706+1651G>C), 7165051(c.706+1680C>G), 7165182(c.706+1811T>C), 7165449(c.706+2078A>C), 7165491(c.706+2120C>T), 7165518(c.706+2147G>A), 7165676(c.706+2305T>A), 7165680(c.706+2309T>C), 7165702(c.706+2331G>A), 7165736(c.706+2365G>A), 7165775(c.706+2404G>C), 7165777(c.706+2406A>G), 7165952(c.706+2581A>T), 7166107(c.706+2736A>G), 7166221(c.706+2850C>T), 7166594(c.707-2921T>G), 7166875(c.707-2640A>G), 7167207(c.707-2308G>A), 7167234(c.707-2281T>A), 7167367(c.707-2148C>T), 7167545(c.707-1970T>G), 7167885(c.707-1630A>T), 7168123(c.707-1392A>G), 7168341(c.707-1174T>C), 7168542(c.707-973T>G), 7168741(c.707-774C>G), 7168843(c.707-672T>C), 7168873(c.707-642G>C), 7169117(c.707-398T>G), 7169138(c.707-377T>C), 7169351(c.707-164A>G), 7169451(c.707-64G>A), +1kb 7173856(c.3974T>G), 7173864(c.3982T>G), 7173869(c.3987T>C), 7173923(c.4041C>G), 7173972(c.4090A>C), 7174003(c.4121A>G), 7174047(c.4165C>G), 7174068(c.4186A>C), 7174281(c.4399T>C), 7174473(c.4591T>C), 7174837(c.4955A>G), 7174932(c.5050T>C), 7175130(c.5248A>G), 7175431(c.5549T>C), 7175552(c.5670T>G), 7175630(c.5748C>T), 7175653(c.5771G>A), 7175705(c.5823G>C), 7175802(c.5920A>G), 7175831(c.5949T>C), 7175997(c.6115C>T), 7176003(c.6121C>T), 7176059(c.6177T>G), 7176142(c.6260C>T), 7176268(c.6386C>T), 7176304(c.6422G>C), 7176305(c.6423A>T), 7176377(c.6495C>T), 7176491(c.6609A>G), 7176506(c.6624G>C), 7176507(c.6625G>A), 7176614(c.6732G>A), 7176619(c.6737G>A), 7176741(c.6859A>G), 7176753(c.6871C>T), 7176824(c.6942T>C), 7176981(c.7099C>T), 7177228(c.7346G>A), 7177323(c.7441T>A),
Insertions	-1kb 7086304 (c.-34005_-34004insTT), 7087495 (c.-32814_-32813insACA), 5'UTR CDS 3'UTR 7172820 (c.2945dupT), INTRON 7089456 (c.-116+253dupA), 7095525 (c.-116+6312dupG), 7096638 (c.-116+7422_-116+7423insAGAT), 7099970 (c.-116+10759dupT), 7100461 (c.-116+11245_-116+11246insG), 7102324 (c.-116+13108dupC), 7102326 (c.-116+13110_-116+13111insC), 7103739 (c.-116+14533dupT), 7103924 (c.-116+14703_-116+14708dupTCCCCA), 7104615 (c.-116+15406dupT), 7106102 (c.-115-14092dupG), 7106992 (c.-115-13200dupT), 7107250 (c.-115-12937dupT), 7110199 (c.-115-9990_-115-9989dupAT), 7114030 (c.-115-6164_-115-6163insC), 7119198 (c.-115-996dupA), 7119207 (c.-115-986dupC), 7120093 (c.-115-101_-115-100insA), 7121110 (c.307+502_307+504dupAAA), 7121357 (c.307+746_307+747dupGG), 7123379 (c.307+2765_307+2766insATT), 7123761 (c.307+3153dupT), 7126682 (c.307+6067_307+6068insG), 7128240 (c.307+7627dupA), 7133758 (c.307+13144dupG), 7133918 (c.307+13303dupT), 7135543 (c.308-12093_308-12092insTC), 7136501 (c.308-11135dupG), 7137989 (c.308-9640dupT), 7137994 (c.308-9640dupT), 7140371 (c.308-7266_308-7265insTC), 7140409 (c.308-7228_308-7227insTT), 7140804 (c.308-6832_308-6831insCC), 7141475 (c.308-6159_308-6158insTTATA), 7141958 (c.308-5679_308-5678insTG), 7142632 (c.308-5005_308-5004insATATCA), 7143948 (c.308-3686_308-3685insTCCTCA), 7144250 (c.308-3379dupT), 7145571 (c.308-2066_308-2065insA), 7148366 (c.410+627dupC), 7153405 (c.410+5666_410+5667insGGA), 7155996 (c.411-4893_411-4890dupGTTT), 7156519 (c.411-4367dupT), 7156984 (c.411-3907_411-3906insTT), 7156996 (c.411-3896_411-3895insGG), 7158097 (c.411-2795_411-2794insTG), 7161160 (c.582+102dupT), 7164957 (c.706+1587_706+1588insCTA), 7169366 (c.707-149_707-148insC), 7169473 (c.707-42_707-41insAAACG), +1kb 7174631 (c.4749_4750insT), 7175018 (c.5136_5137insATTTA), 7175144 (c.5262_*5263insT),
Deletions	-1kb 5'UTR CDS 3'UTR 7169909 (c.30delA), 7170862 (c.984_987delAATA), 7172620 (c.2753_2757delGAAAA), 7173509 (c.3636delT), INTRON 7089700 (c.-116+485_-116+487delTTA), 7091397 (c.-116+2182_-116+2184delTCA), 7095004 (c.-116+5791_-116+5793delCCT), 7097916 (c.-116+8703_-116+8704delCT), 7098100 (c.-116+8885_-116+8889delGTTTT), 7099058 (c.-116+9847delT), 7099388 (c.-116+10196_-116+10199delTATT), 7102303 (c.-116+13088_-116+13089delAA), 7104019 (c.-116+14808delT), 7106113 (c.-115-14080_-115-14079delCT), 7106646 (c.-115-13545delG), 7107905 (c.-115-12282delA), 7108568 (c.-115-11615_-115-11614delTT), 7109691 (c.-115-10495delT), 7112183 (c.-115-8009delA), 7113469 (c.-115-6724_-115-6723delAC), 7114400 (c.-115-5783delT), 7116408 (c.-115-3765_-115-3760delGTTGTT), 7117083 (c.-115-3095_-115-3093delTTG), 7118120 (c.-115-2073_-115-2072delGC), 7119186 (c.-115-1007delC), 7119194 (c.-115-999delC), 7119205 (c.-115-988_-115-987delAA), 7119761 (c.-115-432_-115-431delTT), 7123353 (c.307+2739delG), 7123460 (c.307+2855_307+2856delGG), 7125139 (c.307+4527delC), 7126169 (c.307+5556delA), 7130187 (c.307+9575delC), 7131835 (c.307+11221delG), 7131891 (c.307+11277_307+11286delCATATCCATA), 7132888 (c.307+12274_307+12277delCCTT), 7133401 (c.307+12788delT), 7134177 (c.308-13457delG), 7135126 (c.308-12510_308-12507delCCTT), 7135467 (c.308-12169delG), 7136148 (c.308-11479delT), 7137952 (c.308-9684_308-9682delTTT), 7138260 (c.308-9376_308-9375delAC), 7138524 (c.308-9112delC), 7138720 (c.308-8916_308-8911delCTCCTC), 7138759 (c.308-8877delG), 7139014 (c.308-8583_308-8582delCA), 7139406 (c.308-8227_308-8226delCG), 7141150 (c.308-6474delT), 7141958 (c.308-5678_308-5677delCA), 7142033 (c.308-5602_308-5597delTACTTT), 7143345 (c.308-4286delT), 7144348 (c.308-3285delG), 7145206 (c.308-2422_308-2421delAT), 7148118 (c.410+383_410+386delATGT), 7149765 (c.410+2027_410+2030delTGTG), 7149837 (c.410+2104_410+2107delGGGA), 7149842 (c.410+2104_410+2107delGGGA), 7150538 (c.410+2817_410+2824delGCTTGCTT), 7152236 (c.410+4524_410+4529delTGTTGT), 7153482 (c.410+5754delT), 7156974 (c.411-3917delA), 7157059 (c.411-3832delT), 7157125 (c.411-3766_411-3764delCTA), 7157130 (c.411-3761_411-3760delTA), 7158660 (c.411-2223_411-2221delAAA), 7158834 (c.411-2057delA), 7159843 (c.411-1042delA), 7161546 (c.582+484_582+485delGT), 7164334 (c.706+964delC), 7165271 (c.706+1901_706+1903delTTA), 7165430 (c.706+2064_706+2065delAG), 7166828 (c.707-2684delG), 7166920 (c.707-2594_707-2592delGGA), +1kb 7176571 (c.6690_6694delATAGG), 7176706 (c.6825_6826delTG), 7177346 (c.7465_7468delACTT), 7177603 (c.*7722delT),
coding sequence substitutions
premature termination by the nucleotide substitution	0
synonymous num	7
non-synonymous num	1
synonymous substitutions	7160910 (p.Pro143Pro), 7169516 (p.Pro236Pro), 7169519 (p.Pro237Pro), 7169552 (p.Arg248Arg), 7169651 (p.Val281Val), 7169765 (p.Glu319Glu), 7169864 (p.Thr352Thr),
non-synonymous substitutions	7169770 (p.Ile321Ser),
B6 transcript (ENSMUST00000061280)	MGGAVSAGEDNDDLIDNLKEAQYIRTERVEQAFRAIDRGDYYLEGYRDNAYKDLAWKHGN IHLSAPCIYSEVMEALKLQPGLSFLNLGSGTGYLSTMVGLILGPFGINHGIELHSDVVEY AKEKLESFIKNSDSFDKFEFCEPAFVVGNCLQIASDSHQYDRIYCGAGVQKDHENYMKIL LKVGGILVMPIEDQLTQIMRTGQNTWESKNILAVSFAPLVQPSKNDNGTPDSVGLPPCAV RNLQDLARIYIRRTLRNFINDEMQAKGIPQRAPPKRKRKRVKQRINTYVFVGNQLIPQPL DSEEDEKMEEDSKEEEEKEHIEAMKREEPPQNLLREKIMKLPLPESLKAYLTYFRDK*
MSMv4 transcript	MGGAVSAGEDNDDLIDNLKEAQYIRTERVEQAFRAIDRGDYYLEGYRDNAYKDLAWKHGN IHLSAPCIYSEVMEALKLQPGLSFLNLGSGTGYLSTMVGLILGPFGINHGIELHSDVVEY AKEKLESFIKNSDSFDKFEFCEPAFVVGNCLQIASDSHQYDRIYCGAGVQKDHENYMKIL LKVGGILVMPIEDQLTQIMRTGQNTWESKNILAVSFAPLVQPSKNDNGTPDSVGLPPCAV RNLQDLARIYIRRTLRNFINDEMQAKGIPQRAPPKRKRKRVKQRINTYVFVGNQLIPQPL DSEEDEKMEEDSKEEEEKEHSEAMKREEPPQNLLREKIMKLPLPESLKAYLTYFRDK*
homology	99.72 (358 / 358)

Exon Detail Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Pcmtd1 (ENSMUSG00000051285)
Transcript ID	ENSMUST00000061280


..........CGAACCCCGAAAGACTGTTATGTGATCCCATCCTGTCCAGGGGTGCTTTG
GTTCTAGGAGAGACACAAAGATAGGACTAAGGAATCCGGCCCACAGCCTCAGTCTAAGGG
CTAAAAGCCCACCAAATCTAACTTCGTACTTGAGACATAAAGGTGAGCTGAAAGTCAGAC
CATCGCATAAGTTAACTTTGTTCCAGTTTTCAAGTGATTGGAAGCTCTCATTTTACTATT
CTGTTCTTAAACACTTTACACAAGGTTACTGTAGGTGACAGCAACCTAGGCCTCAAGACC
TTTTGTTTTCCTGATAGGGACTTGATGTATGTATGTAGTACAGGCAGACTTTGAGCATCC
CAAGTGCTGGGGTTACAAGCCAGTGCCACCACATCTGGAACGTGCATTTGGTTACAAATT
ACAGCATTGGGAAAGCAGTGTCTTTTTATGTGCTGGAAACAAACAAACAAACAAAAAATA
CAGTCCCAAAGTAGGAATCGACATGTTTACTGCGGAGGACTACAGAGGTAGATGCTCCCC
CTTGCTTCTGACCCTCGCCACTTCTCAACAAGCACTCCTTCCCGACACCGACACAGGCAG
GGGCTTCGGCGTGGACCAAGAAGGCGTTAGCTGCGCCTGCACAGGGGGCGACGCATGCAC
CGCCGCCAGTCATTGGGTGCGCGCCGGGTCTGCAAGCATCCTCTCCATCACCCGCTACAG
AGACCCGCGGAGAGGCTGGAGATGAAGTGGCCCCGTAGATCCAGTCGGCAAAACGCCGAC
CGGAGGCGGAGCTGGGGACGGACTGAGTCACCAGACCCTGCGCTCCCGAGCTACGCAGCA
CACAAACAAAACAGCGACAGAATAGGAGGAGCCCCAGCTCTCGCGGCATCCGCGGGAGCT
GCCAGCCGCTTGGGCAAGCCTCGCGTTGTTTGGTTAAGGGGCAGGGCGTTCAGCGAGAGG
GCGGAGTCCAACTCAGCTGAGGGTGGGGGTGTTCCCAGGCCACGTTGATT
GGCATCTTTCTTCGGAGGGCGCCCCGCGCACGCGCAGCTCCCAGGAGGCGGTGGCGACTAGGGCAGTCCAGCTGCCCGGGTCCCGGGTTGCGGGTCGGGCTCCGCCCTCCCGCGTCGGCGCTGGCGGACGCTGTGCCGGGCCAGTCGGCTGTCTCTGCGGCGCTCCGCCCGCCGCCGGTCCGCCGCTGTTTTGGCCTGGAGGGCTCCCGCCTACGCAGGCTCGTGACGCGGGGGCTGGGACGGGGCTTCAGGGACTGAGCGGGCGCTGCCGCTGTGTGAGCGTCTTCTGCGCCTTCG
GTAAGTGCGGTCCGCGTCCGCTGCT..........TTGTTTATTTTTTACTCTTTTCCAG
GTTTAATTTATTTTTGGAAATCAAGTTCAATATTAAAAAGAAAGAGCACACATTATTGGAAGCCATTTCTACTAATTCGTTACATTTTAACTTATGATTTGATTTGAATACTGTCATGGGAGGAGCTGTGAGTGCTGGGGAAGATAATGATGACTTAATTGATAACCTTAAAGAAGCTCAGTACATCCGAACTGAAAGAGTAGAGCAAGCCTTCAGAGCCATTGACCGCGGAGATTACTATCTGGAAGGCTACCGAGACAATGCTTACAAAGACTTAGCCTGGAAGCACGGGAACATACACTTGTCAGCACCTTGCATTTATTCTGAAGTTATGGAAGCTTTGAAACTTCAACCAGGATTATCTTTTCTTAACCTGGGAAGTGGAACCGGATATTTAAGTACAATGGTGGGCTTAATTTTAG
GTAATTTTATTTTTGTAAATTTCTC..........GTAAAAAATGCTTATATAATTACAG
GTCCTTTTGGAATAAATCATGGGATTGAACTTCATTCAGATGTGGTGGAGTATGCCAAGGAAAAACTGGAGAGCTTCATCAAAAATAGTGATAGCTTTGATAA
GTAAGTATTTATACCTGTAGTTTGG..........TTAAAATGTTTGTTTTCCCACATAG
ATTTGAATTCTGTGAACCTGCATTTGTGGTGGGTAATTGCCTTCAGATAGCTTCTGACAGTCATCAGTATGATCGAATTTACTGTGGAGCTGGAGTCCAGAAAGACCACGAAAACTACATGAAGATCTTACTCAAAGTTGGGGGCATATTGGTCATGCCTATAGAGGATCAG
GTACTTTTACTGTCCTGAATTTGTC..........TTCTTTCTTGTTTCACTCCAAATAG
TTGACACAGATTATGCGGACTGGACAAAACACTTGGGAAAGTAAAAATATCCTTGCGGTTTCCTTTGCACCACTAGTACAGCCTAGTAAGAATGATAATGGCACACCGGACTCTGTGGGGCTCC
GTAAGTAGATATTTGAACCCAGAAT..........GTTTCTTTTTTGTGTTTGTTTGTAG
CCCCGTGTGCTGTCAGGAATCTCCAAGACTTGGCTCGTATTTACATTCGACGTACACTTAGAAACTTCATAAATGATGAGATGCAGGCCAAGGGGATTCCACAAAGGGCTCCACCCAAGAGGAAAAGAAAGAGAGTCAAACAGAGAATTAATACTTACGTATTTGTGGGTAATCAGCTTATCCCTCAGCCTCTAGACAGTGAAGAGGATGAAAAAATGGAAGAAGACAGCAAAGAAGAAGAGGAGAAAGAACACAGCGAAGCCATGAAGCGCGAGGAACCACCTCAGAACCTACTGAGGGAAAAGATAATGAAGCTGCCACTCCCAGAGTCTTTAAAGGCTTACTTGACGTATTTTCGAGACAAATAACTTAAACAAGGAAGAATGCCTACTGATAAACTCCCTTACTCTTGTAAATGTACTATTAATTAGGACTTAGAGAATTACTTCATTAGAATGAATTATTGCAGAAAAAAGTCTAAGTTATTTCTTTTAATAACAGAAATGATGTATTCAGTGATTTAAAAGAGTCTCTTTCCTAAGATCTATTTTTCTTAAATCTTGAAGAATTACTGTTTTGATCTCAAAGCGGGATGGGTCAATAGTAAGAACTTTGTATACAGTACTCTTTCTGGTTCTTCATGGATTTGTAGTGTTGGCAATTGAATTTCATTCTATAAGAGGTTGATACACATATTGTCACACATATAGGCTTATTTAAATTGCCGTTTGCATTTCTGTTACTTGAGCTTGCTTATCTAATAAGGAAAGCAAATGCTTGTAGACCTACCTACCTTACTTATGTTCTAGACATGTCCCGGGCAACGTATGAGTGCAATACTAATTCAAGATACTGAGTAATTTAGCTTTAAAAACCACAGACTTCATGAAATTTTACAGACCCGAAACTTAAGCTTTTGAATCTATTGCCAAAAGGCATGGGGAAAATTTCTGCTTCTCTCATAGAGATTTTTAAGAGCTAGTGAATGTTAAAGTAGGAAGTGGCTACTTGACACAACTAGTTTGTATGGGCCCTTTGTGTTCTCAGTATTTAAAGATAATGAGGTTATCTTAACTATAGAATTTTAAGCGGTAGTATATTTAGGATTGCTTTTCTATAAATAACTATAAAGTATTAGATTTGGAAAGTCATTCACTGTCTCATTTGCTTCTAAATGCAGACTGTGAATAAGTCACATTAAGTGATCAGCACTGCTTAGGGACCTCCAGCAGCAGGGGGAATGATATGATCAGTAGAGGCATTTTAGCAGTGGAACTTTTCATTAAGTAGATATTTATCTTTGACAAGGTAGGCCACACTGGCCTCATCTGCTCTGAATCTTTCTAATATAAATAGTCATGGGAGTTGTATGTAGATGCGTTTGTGTTAAAATTTGCTTCAGAATCAGAGTGGGATCTCTGGGACCTATACCAAGCTCATTATCCTTCATTCTGTATTTTGTTTCTTTGATAGAATGATGATGATTTTCACTTTTTGCTTAATACTACATCCTTAAGCTACTTACATAGGGTATCAGTGATACACCAGGCTGTGCATGTTATTACTAGTTCTTTCTTCCTGGTAGGGCCTGCACAGTTATTCCTGGTTAAGAAGCTGTGGGATGTGACCTACTTACTGCTTACCATCACACGGAAGGGAAGATTTCAAGTGTCTCACTTATTCCCACCACATCACTGTCAGAGCAGCCTCTCGGATTTACATAAGGAAGTACAATCATGATGATTCAAATAGTTTATAACTCAGGTCCAATAATTCTGTGTAGGTGATCAGTTAAAACAGTTTAAAGATGAAATTGACCCAAATAATTGATAATGTTTTAATAATGTGAACAACAGTGTTATGGAAAGGATTCGTTTGACTCTTGTGAAATGGGCCTGTATGATTTTTCTTAATGTAATTAGTAAACAAACTATTATTAAGATATGCTCTATCCTGTTTCTGTCCAAAAAAGAAAAAAGACATCTCCCTCTCTCTGACGTGGTACTGGGGGTTAAACCCAGGACCAGGACCTCTTGCATGCTAGGCAAGCACTCTACAAATGAGATATATCCCTAGACCAACATACTCTTTTATTCTTTTTAAAATTTTGTTTAAGAAGTTTAATCTTGAACTCCTGATACCCACATAGTCTTATCTGGGAAGAGTTGTCATTTATTTTCCATTCTGTCACCCACATCTCTTTACTTTTCTCTTAAGAGCTTGATGTACAGAAAACTGAAAATATGTAATGCTCAGTGATCTTATTATTTAGGAGTGTTTTGACTGATATATTTAAAGATAGATTATATTCATGCTGTCTTCTGTTGACTTTGAGAAATTGTACAGTAGATTGTCTTGATCATTGCATTTGTTGTCTTTGAAATGTATATTTTGTCATTTTAAATTCATTTACTTTTCAGGTGTGACTTTATGGTTGACTTTTAAAGGTAGGGATAGATGAAAATTTAAGGAAAGCTATCTTATCTATCAACTCGGATGCATTAGATTAAGAATATTTGGGTTCGGGCTTATTTTTATTTGAGTGTGGAAAGTTATGCTTTATAAGTAAAGAAGTAGCAAATACAGATGAAATAAAAATAAATGGAAGAATATAAAGAAGAAAAAACTAAGAAAATAAACAAAAATGTAAGTGAAAGTAAGCCATATGTGATGGCTACTGCCTGTGGTCAGGGCTTGAGAAGCTGAGGCAGGAGGATTACAAATTTAAGGCATCTGTGGTTTCAGAGGGACTTTGAAGCCCATCTGGACCACAGAGTAAGACCGGGTTTTGTTCTTCAGAGAACATAAACAAAAGAAAGTATATGATAATTATGGGGAATAGTCTCGTGGATTTAAATATAGACAAAAATACATTTAAGTTTATCTTTTGAAGACAACAAAGAGGGCTTGAATGGATGTGTGTGGGGCTTAAGTCATGCTGCAGATTGGAGACAGGGCCTGAAGGAACATCGACCATCACTGAAATCCCTAGGATCTGGGAGCAACACCATAGCTGCCAAGGGTCTAATTTAAATCTGTCCTACTCACTGGTCAACATATTGGACTCTGGTGTTAATATAATGTTAAAATAGCTGCTTACATGGTTAAAAGAAAAGAAAAGAAAATGTGCTGATTGTTTGAGATGAAAGTAAAAGAAAACCTGCTAAATCATTGGGGAACTTGGGAGGAAAATCATTTTAAATAAACAAATCACATCATTACACAGCATTATCCAGTGGCCTGCCTCTTTTATTTTTCTCTTATTTTTGCGATCAATAATCACTGTACATATAGATATTTAGCCACTTTTTTTAGCTCCATCGACTTCAGTGGTTAGGTCAGTCCCCATCGAGACACCGGACTTAAAGAACTGAGCATTGATAAGAACTCAGTATGGCTGCATAGGAGACAAGAACAAGCAGTGATCTAGTGATTCACACCTGTCTTGCCTTTACTGTATTCACAGGAGCTTTGGATTGAGAAGAATTCAGGCAAGGAGCAGGAGGTAGGCTTAAGGCAGGCCTGGATAAAGTATGGTCCTGGAAGGTGTCCCAAAGAAATTCAAAGATGATTATTTCTTTAGTTTTTGCCTTGTCCTCACCAGTAATTGCTCCCATCTAGGGAGAGGGAGGGATATTGATGTCTCTCTTTTAAACATATGTTTACTCTTCCAAGGTGACTTATGGGACTAAGAAAGGAAGCAAAGCTTTTTACCAGAAGTAGACTTAAACTTTGAGTTTTTACGTTGCTGTTTATATCTCTAATTCAGCACTCTTATTGCTGTAGCTAAGCCTTTTCGATTATATATTAAGTAGAGTTGAAAGTGGAGATCCTTCTTGAGTTCTTAGTAGTGGAAATGCTGAGTTCTCCCATAAAAATGATGTGCCTGAATGGTTTGCCATATATAGCCTTTATTATGTGATGATATGATCCTTTTATTCTGAATTTCTTCAGGACTTTTAACATAAGGGGATGTTAAATTTTGTCCAAAGCCATTTTTTTTTGCATTTATAAAGATGATCATGTTATTCTGTCTTTGAGCCCATTTATGTAATTTCTAATACACACACACACATCCCTGTATCTGGAATAAAGCCAATGTAGTTGTGCTGAA
TTATTTTTTTGAGGTGTTCTTGAATTTGTTTTGTAAATGTTAAGAATTTTTGTGTCAGTA
AGGGATCTTGGCCTTTTAGTTGTGCCATTAATCTGGTTTTGTCATTGGAACATTTAAAAG
GCTTAGAAATATTCCCTCCTTTTCTATTTATGGGACAATTTGAGAAGCATTTGGTGTATT
AATTTTTCTTTGAGGACCTGGTAAAATTCATCAGTGAATCCACCAGGGCCTGGACGTTTT
CAGTAGTGATGCTTTAAATTACTAGCTAACTGGGGATAAAATGGGCTGTTGAAAGCTTAG
ATCCTAACCCCAGTGACAACTCTTAAAACAAGGCCTCAACTAACCCTTCCCAAATAGTTC
TACCAAGCATTCTAGTAAGGGATCCATTCTCATTCAAGCAATCACAACACTTCACACTGT
ACAACACTCCAGTTTTTACCTTATGTATAACCCCTTTTCATGATGTTTCTTGGGCCTTAA
GAGGGGAGTGGTGTAGATGACCCATTTAGCAGTGAGCAATCAATAGTCTGAGCACTTTCC
ACAGGAAGTGATTCTTTGACTAAGGCTGAGAATAGTATGTGTCGATTTAGAAAGAAGTTT
TACAACATGTCCTTTTAGAAAAACAATAGTTTGCCACCTGAGTCCTATGATACCCCCAGC
TTTGGGGTTTTGATTAGATTTACAGTAGCAGAAATGAATTCTCTCCTGAGAAACCTGAAT
GTAAATACAACTCATTTGCACAGCAACTACATTCTAACTGCTCCCACAGTGAATAAGGAT
TCTCTTTCCCTACACCTTAGTCAGCATTTGTTGTTGTCCGTTTTATTGATGATAGCCATT
CTGGCGGGAGTGAGGTAGAATTTCAAAGTAGTTTTGGTTTACATTTCCCTGATGTATGGG
GAATCTTGAACACTTGAAATGCATTTGGTTATTTTTTTCTTCTTTTGAGAACTCTGTTAG
GTTTCATAGCCCATTTAAATTATTTTTCTTGCTTTTTTTT..........

No.	Exon / Intron	Start	End	Start Phase	End Phase	Length	Sequence
	5' upstream sequence						..........CGAACCCCGAAAGACTGTTATGTGATCCCATCCTGTCCAGGGGTGCTTTG GTTCTAGGAGAGACACAAAGATAGGACTAAGGAATCCGGCCCACAGCCTCAGTCTAAGGG CTAAAAGCCCACCAAATCTAACTTCGTACTTGAGACATAAAGGTGAGCTGAAAGTCAGAC CATCGCATAAGTTAACTTTGTTCCAGTTTTCAAGTGATTGGAAGCTCTCATTTTACTATT CTGTTCTTAAACACTTTACACAAGGTTACTGTAGGTGACAGCAACCTAGGCCTCAAGACC TTTTGTTTTCCTGATAGGGACTTGATGTATGTATGTAGTACAGGCAGACTTTGAGCATCC CAAGTGCTGGGGTTACAAGCCAGTGCCACCACATCTGGAACGTGCATTTGGTTACAAATT ACAGCATTGGGAAAGCAGTGTCTTTTTATGTGCTGGAAACAAACAAACAAACAAAAAATA CAGTCCCAAAGTAGGAATCGACATGTTTACTGCGGAGGACTACAGAGGTAGATGCTCCCC CTTGCTTCTGACCCTCGCCACTTCTCAACAAGCACTCCTTCCCGACACCGACACAGGCAG GGGCTTCGGCGTGGACCAAGAAGGCGTTAGCTGCGCCTGCACAGGGGGCGACGCATGCAC CGCCGCCAGTCATTGGGTGCGCGCCGGGTCTGCAAGCATCCTCTCCATCACCCGCTACAG AGACCCGCGGAGAGGCTGGAGATGAAGTGGCCCCGTAGATCCAGTCGGCAAAACGCCGAC CGGAGGCGGAGCTGGGGACGGACTGAGTCACCAGACCCTGCGCTCCCGAGCTACGCAGCA CACAAACAAAACAGCGACAGAATAGGAGGAGCCCCAGCTCTCGCGGCATCCGCGGGAGCT GCCAGCCGCTTGGGCAAGCCTCGCGTTGTTTGGTTAAGGGGCAGGGCGTTCAGCGAGAGG GCGGAGTCCAACTCAGCTGAGGGTGGGGGTGTTCCCAGGCCACGTTGATT
1	EXON 1	7088920	7089216	-	-	297	GGCATCTTTCTTCGGAGGGCGCCCCGCGCACGCGCAGCTCCCAGGAGGCGGTGGCGACTA GGGCAGTCCAGCTGCCCGGGTCCCGGGTTGCGGGTCGGGCTCCGCCCTCCCGCGTCGGCG CTGGCGGACGCTGTGCCGGGCCAGTCGGCTGTCTCTGCGGCGCTCCGCCCGCCGCCGGTC CGCCGCTGTTTTGGCCTGGAGGGCTCCCGCCTACGCAGGCTCGTGACGCGGGGGCTGGGA CGGGGCTTCAGGGACTGAGCGGGCGCTGCCGCTGTGTGAGCGTCTTCTGCGCCTTCG
	INTRON 1 - 2	7089217	7120193			30977	GTAAGTGCGGTCCGCGTCCGCTGCT..........TTGTTTATTTTTTACTCTTTTCCAG
2	EXON 2	7120194	7120615	-	1	422	GTTTAATTTATTTTTGGAAATCAAGTTCAATATTAAAAAGAAAGAGCACACATTATTGGA AGCCATTTCTACTAATTCGTTACATTTTAACTTATGATTTGATTTGAATACTGTCATGGG AGGAGCTGTGAGTGCTGGGGAAGATAATGATGACTTAATTGATAACCTTAAAGAAGCTCA GTACATCCGAACTGAAAGAGTAGAGCAAGCCTTCAGAGCCATTGACCGCGGAGATTACTA TCTGGAAGGCTACCGAGACAATGCTTACAAAGACTTAGCCTGGAAGCACGGGAACATACA CTTGTCAGCACCTTGCATTTATTCTGAAGTTATGGAAGCTTTGAAACTTCAACCAGGATT ATCTTTTCTTAACCTGGGAAGTGGAACCGGATATTTAAGTACAATGGTGGGCTTAATTTT AG
	INTRON 2 - 3	7120616	7147636			27021	GTAATTTTATTTTTGTAAATTTCTC..........GTAAAAAATGCTTATATAATTACAG
3	EXON 3	7147637	7147739	1	2	103	GTCCTTTTGGAATAAATCATGGGATTGAACTTCATTCAGATGTGGTGGAGTATGCCAAGG AAAAACTGGAGAGCTTCATCAAAAATAGTGATAGCTTTGATAA
	INTRON 3 - 4	7147740	7160891			13152	GTAAGTATTTATACCTGTAGTTTGG..........TTAAAATGTTTGTTTTCCCACATAG
4	EXON 4	7160892	7161063	2	0	172	ATTTGAATTCTGTGAACCTGCATTTGTGGTGGGTAATTGCCTTCAGATAGCTTCTGACAG TCATCAGTATGATCGAATTTACTGTGGAGCTGGAGTCCAGAAAGACCACGAAAACTACAT GAAGATCTTACTCAAAGTTGGGGGCATATTGGTCATGCCTATAGAGGATCAG
	INTRON 4 - 5	7161064	7163247			2184	GTACTTTTACTGTCCTGAATTTGTC..........TTCTTTCTTGTTTCACTCCAAATAG
5	EXON 5	7163248	7163371	0	1	124	TTGACACAGATTATGCGGACTGGACAAAACACTTGGGAAAGTAAAAATATCCTTGCGGTT TCCTTTGCACCACTAGTACAGCCTAGTAAGAATGATAATGGCACACCGGACTCTGTGGGG CTCC
	INTRON 5 - 6	7163372	7169514			6143	GTAAGTAGATATTTGAACCCAGAAT..........GTTTCTTTTTTGTGTTTGTTTGTAG
6	EXON 6	7169515	7173628	1	-	4114	CCCCGTGTGCTGTCAGGAATCTCCAAGACTTGGCTCGTATTTACATTCGACGTACACTTA GAAACTTCATAAATGATGAGATGCAGGCCAAGGGGATTCCACAAAGGGCTCCACCCAAGA GGAAAAGAAAGAGAGTCAAACAGAGAATTAATACTTACGTATTTGTGGGTAATCAGCTTA TCCCTCAGCCTCTAGACAGTGAAGAGGATGAAAAAATGGAAGAAGACAGCAAAGAAGAAG AGGAGAAAGAACACAGCGAAGCCATGAAGCGCGAGGAACCACCTCAGAACCTACTGAGGG AAAAGATAATGAAGCTGCCACTCCCAGAGTCTTTAAAGGCTTACTTGACGTATTTTCGAG ACAAATAACTTAAACAAGGAAGAATGCCTACTGATAAACTCCCTTACTCTTGTAAATGTA CTATTAATTAGGACTTAGAGAATTACTTCATTAGAATGAATTATTGCAGAAAAAAGTCTA AGTTATTTCTTTTAATAACAGAAATGATGTATTCAGTGATTTAAAAGAGTCTCTTTCCTA AGATCTATTTTTCTTAAATCTTGAAGAATTACTGTTTTGATCTCAAAGCGGGATGGGTCA ATAGTAAGAACTTTGTATACAGTACTCTTTCTGGTTCTTCATGGATTTGTAGTGTTGGCA ATTGAATTTCATTCTATAAGAGGTTGATACACATATTGTCACACATATAGGCTTATTTAA ATTGCCGTTTGCATTTCTGTTACTTGAGCTTGCTTATCTAATAAGGAAAGCAAATGCTTG TAGACCTACCTACCTTACTTATGTTCTAGACATGTCCCGGGCAACGTATGAGTGCAATAC TAATTCAAGATACTGAGTAATTTAGCTTTAAAAACCACAGACTTCATGAAATTTTACAGA CCCGAAACTTAAGCTTTTGAATCTATTGCCAAAAGGCATGGGGAAAATTTCTGCTTCTCT CATAGAGATTTTTAAGAGCTAGTGAATGTTAAAGTAGGAAGTGGCTACTTGACACAACTA GTTTGTATGGGCCCTTTGTGTTCTCAGTATTTAAAGATAATGAGGTTATCTTAACTATAG AATTTTAAGCGGTAGTATATTTAGGATTGCTTTTCTATAAATAACTATAAAGTATTAGAT TTGGAAAGTCATTCACTGTCTCATTTGCTTCTAAATGCAGACTGTGAATAAGTCACATTA AGTGATCAGCACTGCTTAGGGACCTCCAGCAGCAGGGGGAATGATATGATCAGTAGAGGC ATTTTAGCAGTGGAACTTTTCATTAAGTAGATATTTATCTTTGACAAGGTAGGCCACACT GGCCTCATCTGCTCTGAATCTTTCTAATATAAATAGTCATGGGAGTTGTATGTAGATGCG TTTGTGTTAAAATTTGCTTCAGAATCAGAGTGGGATCTCTGGGACCTATACCAAGCTCAT TATCCTTCATTCTGTATTTTGTTTCTTTGATAGAATGATGATGATTTTCACTTTTTGCTT AATACTACATCCTTAAGCTACTTACATAGGGTATCAGTGATACACCAGGCTGTGCATGTT ATTACTAGTTCTTTCTTCCTGGTAGGGCCTGCACAGTTATTCCTGGTTAAGAAGCTGTGG GATGTGACCTACTTACTGCTTACCATCACACGGAAGGGAAGATTTCAAGTGTCTCACTTA TTCCCACCACATCACTGTCAGAGCAGCCTCTCGGATTTACATAAGGAAGTACAATCATGA TGATTCAAATAGTTTATAACTCAGGTCCAATAATTCTGTGTAGGTGATCAGTTAAAACAG TTTAAAGATGAAATTGACCCAAATAATTGATAATGTTTTAATAATGTGAACAACAGTGTT ATGGAAAGGATTCGTTTGACTCTTGTGAAATGGGCCTGTATGATTTTTCTTAATGTAATT AGTAAACAAACTATTATTAAGATATGCTCTATCCTGTTTCTGTCCAAAAAAGAAAAAAGA CATCTCCCTCTCTCTGACGTGGTACTGGGGGTTAAACCCAGGACCAGGACCTCTTGCATG CTAGGCAAGCACTCTACAAATGAGATATATCCCTAGACCAACATACTCTTTTATTCTTTT TAAAATTTTGTTTAAGAAGTTTAATCTTGAACTCCTGATACCCACATAGTCTTATCTGGG AAGAGTTGTCATTTATTTTCCATTCTGTCACCCACATCTCTTTACTTTTCTCTTAAGAGC TTGATGTACAGAAAACTGAAAATATGTAATGCTCAGTGATCTTATTATTTAGGAGTGTTT TGACTGATATATTTAAAGATAGATTATATTCATGCTGTCTTCTGTTGACTTTGAGAAATT GTACAGTAGATTGTCTTGATCATTGCATTTGTTGTCTTTGAAATGTATATTTTGTCATTT TAAATTCATTTACTTTTCAGGTGTGACTTTATGGTTGACTTTTAAAGGTAGGGATAGATG AAAATTTAAGGAAAGCTATCTTATCTATCAACTCGGATGCATTAGATTAAGAATATTTGG GTTCGGGCTTATTTTTATTTGAGTGTGGAAAGTTATGCTTTATAAGTAAAGAAGTAGCAA ATACAGATGAAATAAAAATAAATGGAAGAATATAAAGAAGAAAAAACTAAGAAAATAAAC AAAAATGTAAGTGAAAGTAAGCCATATGTGATGGCTACTGCCTGTGGTCAGGGCTTGAGA AGCTGAGGCAGGAGGATTACAAATTTAAGGCATCTGTGGTTTCAGAGGGACTTTGAAGCC CATCTGGACCACAGAGTAAGACCGGGTTTTGTTCTTCAGAGAACATAAACAAAAGAAAGT ATATGATAATTATGGGGAATAGTCTCGTGGATTTAAATATAGACAAAAATACATTTAAGT TTATCTTTTGAAGACAACAAAGAGGGCTTGAATGGATGTGTGTGGGGCTTAAGTCATGCT GCAGATTGGAGACAGGGCCTGAAGGAACATCGACCATCACTGAAATCCCTAGGATCTGGG AGCAACACCATAGCTGCCAAGGGTCTAATTTAAATCTGTCCTACTCACTGGTCAACATAT TGGACTCTGGTGTTAATATAATGTTAAAATAGCTGCTTACATGGTTAAAAGAAAAGAAAA GAAAATGTGCTGATTGTTTGAGATGAAAGTAAAAGAAAACCTGCTAAATCATTGGGGAAC TTGGGAGGAAAATCATTTTAAATAAACAAATCACATCATTACACAGCATTATCCAGTGGC CTGCCTCTTTTATTTTTCTCTTATTTTTGCGATCAATAATCACTGTACATATAGATATTT AGCCACTTTTTTTAGCTCCATCGACTTCAGTGGTTAGGTCAGTCCCCATCGAGACACCGG ACTTAAAGAACTGAGCATTGATAAGAACTCAGTATGGCTGCATAGGAGACAAGAACAAGC AGTGATCTAGTGATTCACACCTGTCTTGCCTTTACTGTATTCACAGGAGCTTTGGATTGA GAAGAATTCAGGCAAGGAGCAGGAGGTAGGCTTAAGGCAGGCCTGGATAAAGTATGGTCC TGGAAGGTGTCCCAAAGAAATTCAAAGATGATTATTTCTTTAGTTTTTGCCTTGTCCTCA CCAGTAATTGCTCCCATCTAGGGAGAGGGAGGGATATTGATGTCTCTCTTTTAAACATAT GTTTACTCTTCCAAGGTGACTTATGGGACTAAGAAAGGAAGCAAAGCTTTTTACCAGAAG TAGACTTAAACTTTGAGTTTTTACGTTGCTGTTTATATCTCTAATTCAGCACTCTTATTG CTGTAGCTAAGCCTTTTCGATTATATATTAAGTAGAGTTGAAAGTGGAGATCCTTCTTGA GTTCTTAGTAGTGGAAATGCTGAGTTCTCCCATAAAAATGATGTGCCTGAATGGTTTGCC ATATATAGCCTTTATTATGTGATGATATGATCCTTTTATTCTGAATTTCTTCAGGACTTT TAACATAAGGGGATGTTAAATTTTGTCCAAAGCCATTTTTTTTTGCATTTATAAAGATGA TCATGTTATTCTGTCTTTGAGCCCATTTATGTAATTTCTAATACACACACACACATCCCT GTATCTGGAATAAAGCCAATGTAGTTGTGCTGAA
	3' upstream sequence						TTATTTTTTTGAGGTGTTCTTGAATTTGTTTTGTAAATGTTAAGAATTTTTGTGTCAGTA AGGGATCTTGGCCTTTTAGTTGTGCCATTAATCTGGTTTTGTCATTGGAACATTTAAAAG GCTTAGAAATATTCCCTCCTTTTCTATTTATGGGACAATTTGAGAAGCATTTGGTGTATT AATTTTTCTTTGAGGACCTGGTAAAATTCATCAGTGAATCCACCAGGGCCTGGACGTTTT CAGTAGTGATGCTTTAAATTACTAGCTAACTGGGGATAAAATGGGCTGTTGAAAGCTTAG ATCCTAACCCCAGTGACAACTCTTAAAACAAGGCCTCAACTAACCCTTCCCAAATAGTTC TACCAAGCATTCTAGTAAGGGATCCATTCTCATTCAAGCAATCACAACACTTCACACTGT ACAACACTCCAGTTTTTACCTTATGTATAACCCCTTTTCATGATGTTTCTTGGGCCTTAA GAGGGGAGTGGTGTAGATGACCCATTTAGCAGTGAGCAATCAATAGTCTGAGCACTTTCC ACAGGAAGTGATTCTTTGACTAAGGCTGAGAATAGTATGTGTCGATTTAGAAAGAAGTTT TACAACATGTCCTTTTAGAAAAACAATAGTTTGCCACCTGAGTCCTATGATACCCCCAGC TTTGGGGTTTTGATTAGATTTACAGTAGCAGAAATGAATTCTCTCCTGAGAAACCTGAAT GTAAATACAACTCATTTGCACAGCAACTACATTCTAACTGCTCCCACAGTGAATAAGGAT TCTCTTTCCCTACACCTTAGTCAGCATTTGTTGTTGTCCGTTTTATTGATGATAGCCATT CTGGCGGGAGTGAGGTAGAATTTCAAAGTAGTTTTGGTTTACATTTCCCTGATGTATGGG GAATCTTGAACACTTGAAATGCATTTGGTTATTTTTTTCTTCTTTTGAGAACTCTGTTAG GTTTCATAGCCCATTTAAATTATTTTTCTTGCTTTTTTTT..........

Sequence Detail Report

Gene Symbol (Gene ID)	Pcmtd1 (ENSMUSG00000051285)
Transcript ID	ENSMUST00000061280

		SNP Information
Strain :
Sequence Retrieve :
Exon translate : CDS Start ( 1 ) - End ( 358 ) -
Strand :	forward reverse
Show sequence :	nucleotide amino acid
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