MoG+ -Mouse Genome database with high added value-

Target CDS Information

Gene Symbol (Gene ID)

Tfap2b (ENSMUSG00000025927)

Cross Reference

CCDS	CCDS14840.1
EMBL	AC132356
GO	GO:0000122, GO:0000979, GO:0000981, ...show all
goslim_goa	GO:0000988, GO:0001071, GO:0003674, ...show all
MGI_trans_name	Tfap2b-003
OTTP	OTTMUSP00000067533
OTTT	OTTMUST00000123885
RefSeq_mRNA	NM_001025305.2
RefSeq_peptide	NP_001020476
RefSeq_peptide_predicted	XP_006495558.1

UCSC	uc007akt.2
UniParc	UPI00005520F1
Uniprot/SPTREMBL	E9Q5N4
Vega_transcript	OTTMUST00000123885, Tfap2b-003
Vega_translation	178806, OTTMUSP00000067533

Definition

protein_id:ENSMUSP00000064488
translation:

MLVHTYSSMDRHDGVPSHSSRLSQLGSVSQGPYSSAPPLSHTPSSDFQPPYFPPPYQPLP
YHQSQDPYSHVNDPYSLNPLHQPQQHPWGQRQRQEVGSEAGSLLPQPRAALPQLSGLDPR
RDYHSVRRPDVLLHSAHHGLDAGMGDSLSLHGLGHPGMEDVQSVEDANNSGMNLLDQSVI
KKVPVPPKSVTSLMMNKDGFLGGMSVNTGEVFCSVPGRLSLLSSTSKYKVTVGEVQRRLS
PPECLNASLLGGVLRRAKSKNGGRSLRERLEKIGLNLPAGRRKAANVTLLTSLVEGEAVH
LARDFGYICETEFPAKAVSEYLNRQHTDPSDLHSRKNMLLATKQLCKEFTDLLAQDRTPI
GNSRPSPILEPGIQSCLTHFSLITHGFGAPAICAALTALQNYLTEALKGMDKMFLNNTTN
RHTSGEGPGSKTGDKEEKHRK

Chromosome

Length
Position(start - end)

21,949
19,212,397 - 19,234,347

Orient to Chromosome

plus

Link

Location : (1:19212397-19234347)
/

Detail Map

name	Tfap2b (ENSMUSG00000025927)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : Tfap2b note : transcription factor AP-2 beta [Source:MGI Symbol;Acc:MGI:104672]

name	Tfap2b (ENSMUSG00000025927)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000027059

name	Tfap2b (ENSMUSG00000025927)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000187754

name	Tfap2b (ENSMUSG00000025927)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000064976

name	Tfap2b (ENSMUSG00000025927) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS14839.1 Uniprot/SWISSPROT:Q61313 RefSeq_peptide:NP_033360 RefSeq_mRNA:NM_009334.3 RefSeq_mRNA_predicted:XM_006495492.2 RefSeq_peptide_predicted:XP_006495554.1 RefSeq_peptide_predicted:XP_006495555.1 RefSeq_peptide_predicted:XP_006495556.1 Vega_transcript:OTTMUST00000123883 Vega_transcript:Tfap2b-001 UCSC:uc007akr.2 Fantom:5430431G23 EMBL:AK017373 EMBL:X78197 GO:GO:0000122 GO:GO:0000122 GO:GO:0000979 GO:GO:0000979 GO:GO:0000981 GO:GO:0000981 GO:GO:0000983 GO:GO:0001077 GO:GO:0001105 GO:GO:0001106 GO:GO:0001158 GO:GO:0001158 GO:GO:0001822 GO:GO:0003091 GO:GO:0003700 GO:GO:0003700 GO:GO:0003713 GO:GO:0003713 GO:GO:0003714 GO:GO:0003714 GO:GO:0005515 GO:GO:0005515 GO:GO:0005634 GO:GO:0006006 GO:GO:0006006 GO:GO:0006355 GO:GO:0006355 GO:GO:0006366 GO:GO:0006915 GO:GO:0007423 GO:GO:0008284 GO:GO:0008284 GO:GO:0008285 GO:GO:0008285 GO:GO:0010842 GO:GO:0010960 GO:GO:0030510 GO:GO:0035136 GO:GO:0035137 GO:GO:0035810 GO:GO:0035909 GO:GO:0042593 GO:GO:0042803 GO:GO:0042803 GO:GO:0043027 GO:GO:0043066 GO:GO:0043154 GO:GO:0043524 GO:GO:0043525 GO:GO:0043525 GO:GO:0043565 GO:GO:0043565 GO:GO:0043588 GO:GO:0045444 GO:GO:0045444 GO:GO:0045595 GO:GO:0045595 GO:GO:0045892 GO:GO:0045892 GO:GO:0045893 GO:GO:0045893 GO:GO:0045944 GO:GO:0045944 GO:GO:0046982 GO:GO:0046982 GO:GO:0046983 GO:GO:0046983 GO:GO:0048485 GO:GO:0050796 GO:GO:0050796 GO:GO:0055062 GO:GO:0055074 GO:GO:0055075 GO:GO:0055078 GO:GO:0072017 GO:GO:0072044 GO:GO:0072210 GO:GO:0097070 GO:GO:0097275 GO:GO:0097276 GO:GO:0097277 MGI_trans_name:Tfap2b-001 Vega_translation:178804 Vega_translation:OTTMUSP00000067531 goslim_goa:GO:0000988 goslim_goa:GO:0001071 goslim_goa:GO:0003674 goslim_goa:GO:0003677 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005975 goslim_goa:GO:0008150 goslim_goa:GO:0008219 goslim_goa:GO:0009058 goslim_goa:GO:0030154 goslim_goa:GO:0030234 goslim_goa:GO:0034641 goslim_goa:GO:0042592 goslim_goa:GO:0043226 goslim_goa:GO:0048856 protein_id:BAB30714.2 protein_id:CAA55036.1 OTTP:OTTMUSP00000067531 OTTT:OTTMUST00000123883 UniParc:UPI00000E90DD
definition	note : transcript_id=ENSMUST00000027059 protein_id : ENSMUSP00000027059 translation : MHSPPRDQAAIMLWKLVENVKYEDIYEDRHDGVPSHSSRLSQLGSVSQGPYSSAPPLSHTPSSDFQPPYFPPPYQPLPYHQSQDPYSHVNDPYSLNPLHQPQQHPWGQRQRQEVGSEAGSLLPQPRAALPQLSGLDPRRDYHSVRRPDVLLHSAHHGLDAGMGDSLSLHGLGHPGMEDVQSVEDANNSGMNLLDQSVIKKVPVPPKSVTSLMMNKDGFLGGMSVNTGEVFCSVPGRLSLLSSTSKYKVTVGEVQRRLSPPECLNASLLGGVLRRAKSKNGGRSLRERLEKIGLNLPAGRRKAANVTLLTSLVEGEAVHLARDFGYICETEFPAKAVSEYLNRQHTDPSDLHSRKNMLLATKQLCKEFTDLLAQDRTPIGNSRPSPILEPGIQSCLTHFSLITHGFGAPAICAALTALQNYLTEALKGMDKMFLNNTTNRHTSGEGPGSKTGDKEEKHRK

name	Tfap2b (ENSMUSG00000025927) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	RefSeq_peptide:NP_001273269 RefSeq_mRNA:NM_001286340.1 RefSeq_peptide_predicted:XP_006495554.1 RefSeq_peptide_predicted:XP_006495556.1 RefSeq_peptide_predicted:XP_006495557.1 Vega_transcript:OTTMUST00000123884 Vega_transcript:Tfap2b-002 Uniprot/SPTREMBL:Q8CE69 UCSC:uc007akq.2 Fantom:4732469D10 EMBL:AC132356 EMBL:AK028906 GO:GO:0000122 GO:GO:0000979 GO:GO:0000981 GO:GO:0001077 GO:GO:0001158 GO:GO:0001822 GO:GO:0003700 GO:GO:0003713 GO:GO:0003714 GO:GO:0005515 GO:GO:0005634 GO:GO:0006006 GO:GO:0006355 GO:GO:0006366 GO:GO:0008284 GO:GO:0008285 GO:GO:0042803 GO:GO:0043066 GO:GO:0043524 GO:GO:0043525 GO:GO:0043565 GO:GO:0045595 GO:GO:0045892 GO:GO:0045893 GO:GO:0045944 GO:GO:0046982 GO:GO:0046983 GO:GO:0048485 GO:GO:0050796 MGI_trans_name:Tfap2b-002 Vega_translation:178805 Vega_translation:OTTMUSP00000067532 goslim_goa:GO:0000988 goslim_goa:GO:0001071 goslim_goa:GO:0003674 goslim_goa:GO:0003677 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005975 goslim_goa:GO:0008150 goslim_goa:GO:0009058 goslim_goa:GO:0034641 goslim_goa:GO:0043226 goslim_goa:GO:0048856 protein_id:BAC26188.1 OTTP:OTTMUSP00000067532 OTTT:OTTMUST00000123884 UniParc:UPI00000E9174
definition	note : transcript_id=ENSMUST00000187754 protein_id : ENSMUSP00000140213 translation : MHSPPRDQAAIMLWKLVENVKYEDIYEDRHDGVPSHSSRLSQLGSVSQGPYSSAPPLSHTPSSDFQPPYFPPPYQPLPYHQSQDPYSHVNDPYSLNPLHQPQQHPWGQRQRQEVGSEAGSLLPQPRAALPQLSGLDPRRDYHSVRRPDVLLHSAHHGLDAGMGDSLSLHGLGHPGMEDVQSVEDANNSGMNLLDQSVIKKVPVPPKSVTSLMMNKDGFLGGMSVNTGEVFCSVPGRLSLLSSTSKYKVTVGEVQRRLSPPECLNASLLGGVLRRAKSKNGGRSLRERLEKIGLNLPAGRRKAANVTLLTSLVEGEAVHLARDFGYICETEFPAKAVSEYLNRQHTDPSDLHSRKNMLLATKQLCKEFTDLLAQDRTPIGNSRPSPILEPGIQSCLTHFSLITHGFGAPAICAALTALQNYLTEALKGMDKMFLNNTTNRHTSGEGPGQRAPRV

name	Tfap2b (ENSMUSG00000025927) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS14840.1 RefSeq_peptide:NP_001020476 RefSeq_mRNA:NM_001025305.2 RefSeq_peptide_predicted:XP_006495558.1 Vega_transcript:OTTMUST00000123885 Vega_transcript:Tfap2b-003 Uniprot/SPTREMBL:E9Q5N4 UCSC:uc007akt.2 EMBL:AC132356 GO:GO:0000122 GO:GO:0000979 GO:GO:0000981 GO:GO:0001077 GO:GO:0001158 GO:GO:0001822 GO:GO:0003700 GO:GO:0003713 GO:GO:0003714 GO:GO:0005515 GO:GO:0005634 GO:GO:0006006 GO:GO:0006355 GO:GO:0006366 GO:GO:0008284 GO:GO:0008285 GO:GO:0042803 GO:GO:0043066 GO:GO:0043524 GO:GO:0043525 GO:GO:0043565 GO:GO:0045595 GO:GO:0045892 GO:GO:0045893 GO:GO:0045944 GO:GO:0046982 GO:GO:0046983 GO:GO:0048485 GO:GO:0050796 MGI_trans_name:Tfap2b-003 Vega_translation:178806 Vega_translation:OTTMUSP00000067533 goslim_goa:GO:0000988 goslim_goa:GO:0001071 goslim_goa:GO:0003674 goslim_goa:GO:0003677 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005975 goslim_goa:GO:0008150 goslim_goa:GO:0009058 goslim_goa:GO:0034641 goslim_goa:GO:0043226 goslim_goa:GO:0048856 OTTP:OTTMUSP00000067533 OTTT:OTTMUST00000123885 UniParc:UPI00005520F1
definition	note : transcript_id=ENSMUST00000064976 protein_id : ENSMUSP00000064488 translation : MLVHTYSSMDRHDGVPSHSSRLSQLGSVSQGPYSSAPPLSHTPSSDFQPPYFPPPYQPLPYHQSQDPYSHVNDPYSLNPLHQPQQHPWGQRQRQEVGSEAGSLLPQPRAALPQLSGLDPRRDYHSVRRPDVLLHSAHHGLDAGMGDSLSLHGLGHPGMEDVQSVEDANNSGMNLLDQSVIKKVPVPPKSVTSLMMNKDGFLGGMSVNTGEVFCSVPGRLSLLSSTSKYKVTVGEVQRRLSPPECLNASLLGGVLRRAKSKNGGRSLRERLEKIGLNLPAGRRKAANVTLLTSLVEGEAVHLARDFGYICETEFPAKAVSEYLNRQHTDPSDLHSRKNMLLATKQLCKEFTDLLAQDRTPIGNSRPSPILEPGIQSCLTHFSLITHGFGAPAICAALTALQNYLTEALKGMDKMFLNNTTNRHTSGEGPGSKTGDKEEKHRK

name
type	misc_feature
link
xref
definition	note : contig AC132356.3 1..166246(-1)

name	Tfap2b (ENSMUSG00000025927)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000123886 Vega_transcript:OTTMUST00000123886 MGI_trans_name:Tfap2b-004 OTTT:OTTMUST00000123886
definition	note : retained_intron note : transcript_id=ENSMUST00000191068

name	Tfap2b (ENSMUSG00000025927)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000123887 Vega_transcript:OTTMUST00000123887 MGI_trans_name:Tfap2b-005 OTTT:OTTMUST00000123887
definition	note : retained_intron note : transcript_id=ENSMUST00000186972

Polymorphisms Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Tfap2b (ENSMUSG00000025927)
Transcript ID	ENSMUST00000064976

Reports
substitution
cSNPs	0
Insertion	15
Deletion	22
SNPs	-1kb 19207208(c.-5189C>T), 19207360(c.-5037G>C), 19207381(c.-5016A>G), 19207607(c.-4790C>T), 19207639(c.-4758G>A), 19207802(c.-4595A>G), 19207858(c.-4539G>A), 19208140(c.-4257T>A), 19208449(c.-3948T>C), 19208641(c.-3756A>G), 19208849(c.-3548A>G), 19209354(c.-3043A>G), 19209628(c.-2769G>C), 19209977(c.-2420T>A), 19210155(c.-2242T>A), 19210363(c.-2034G>A), 19210917(c.-1480G>C), 19211498(c.-899C>T), 19211584(c.-813A>C), 19211809(c.-588A>G), 5'UTR CDS 3'UTR INTRON 19212590(c.27+167A>G), 19212728(c.27+305T>C), 19214435(c.486+26C>T), 19214516(c.486+107G>T), 19214550(c.486+141C>G), 19214933(c.486+524T>C), 19215060(c.486+651C>T), 19215077(c.486+668T>C), 19215211(c.486+802G>T), 19215381(c.486+972C>T), 19215684(c.486+1275A>G), 19215693(c.486+1284A>G), 19215795(c.486+1386A>G), 19215806(c.486+1397T>C), 19216547(c.486+2138T>C), 19216765(c.486+2356T>C), 19216777(c.486+2368A>G), 19216855(c.487-2338G>A), 19217086(c.487-2107A>T), 19218127(c.487-1066C>T), 19218308(c.487-885A>T), 19218528(c.487-665C>G), 19218544(c.487-649C>T), 19218639(c.487-554A>G), 19218778(c.487-415T>G), 19219123(c.487-70A>G), 19219670(c.547+417C>A), 19219674(c.547+421C>A), 19219720(c.547+467T>G), 19219721(c.547+468T>G), 19219870(c.547+617C>T), 19220024(c.547+771T>C), 19220088(c.547+835G>C), 19220156(c.547+903G>A), 19220157(c.547+904G>T), 19220207(c.547+954C>G), 19220403(c.547+1150G>A), 19220854(c.547+1601A>C), 19221073(c.547+1820G>A), 19221965(c.547+2712A>G), 19222316(c.547+3063C>G), 19222424(c.547+3171G>A), 19222686(c.547+3433T>A), 19223007(c.548-3429G>A), 19223066(c.548-3370A>G), 19223154(c.548-3282C>T), 19223595(c.548-2841A>G), 19223799(c.548-2637G>A), 19223868(c.548-2568T>G), 19224009(c.548-2427C>T), 19224028(c.548-2408C>T), 19224361(c.548-2075C>A), 19224435(c.548-2001A>T), 19224453(c.548-1983G>T), 19224781(c.548-1655G>A), 19224833(c.548-1603T>C), 19225820(c.548-616C>T), 19226011(c.548-425C>T), 19226150(c.548-286C>T), 19226370(c.548-66G>A), 19226910(c.767+255G>A), 19227616(c.768-826T>C), 19228268(c.768-174T>C), 19228675(c.886+115T>A), 19228889(c.886+329C>G), 19228899(c.886+339A>C), 19228916(c.886+356T>C), 19228924(c.886+364A>C), 19228973(c.886+413A>G), 19229066(c.886+506T>C), 19229456(c.886+896G>A), 19229658(c.886+1098A>T), 19230176(c.887-837A>G), 19230822(c.887-191G>A), 19231327(c.1028+173C>T), 19231384(c.1028+230C>T), 19231509(c.1028+355G>C), 19231778(c.1028+624T>C), 19231804(c.1028+650A>G), 19232188(c.1028+1034G>A), 19232285(c.1028+1131G>T), 19232628(c.1029-1422T>C), 19232865(c.1029-1185G>A), 19233267(c.1029-783A>G), 19233469(c.1029-581A>G), +1kb 19234719(c.372A>C), 19234800(c.453T>A), 19234906(c.559C>T), 19234952(c.605G>A), 19235075(c.728G>A), 19235176(c.829A>T), 19235568(c.1221T>A), 19235614(c.1267C>A), 19236153(c.1806T>C), 19236525(c.2178C>G), 19236989(c.2642C>T), 19237335(c.2988C>T), 19237496(c.3149G>A), 19237804(c.3457C>A), 19238648(c.4301A>C), 19238909(c.4562A>T), 19238923(c.4576A>C), 19239090(c.4743A>C), 19239254(c.4907C>T), 19239318(c.4971C>T),
Insertions	-1kb 19207974 (c.-4423_-4422insT), 19207987 (c.-4410_-4409insA), 19207993 (c.-4404_-4403insGA), 19209569 (c.-2828dupA), 19209670 (c.-2727_-2726insGG), 5'UTR 19212344 (c.-44dupT), CDS 3'UTR INTRON 19216522 (c.486+2113_486+2114insGA), 19217100 (c.487-2089dupG), 19218517 (c.487-675dupG), 19220535 (c.547+1282_547+1283insCTTTT), 19220777 (c.547+1525dupC), 19222716 (c.547+3467_547+3468dupGA), +1kb 19237690 (c.3343_3344insCCCA), 19238153 (c.3806_3807insAA), 19238158 (c.3809_3811dupAAA),
Deletions	-1kb 19208538 (c.-3858delT), 19208607 (c.-3789_-3786delAAAA), 19208616 (c.-3780_-3776delAAAAA), 19211627 (c.-769_-767delCTC), 19211886 (c.-510delA), 5'UTR 19212267 (c.-129_-126delTTTT), CDS 19234346 (c.10_11delAA), 3'UTR 19234503 (c.165delA), INTRON 19215284 (c.486+876delA), 19215846 (c.486+1438delT), 19219340 (c.547+102_547+105delAAAC), 19220045 (c.547+802delT), 19221243 (c.547+2003delA), 19222553 (c.547+3312_547+3315delAAAA), 19223527 (c.548-2865_548-2862delGTGT), 19226315 (c.548-117delG), 19226936 (c.767+288delA), 19228313 (c.768-119delG), 19232057 (c.1028+904_1028+913delGTTCTTTTTT), +1kb 19234786 (c.440_442delTTT), 19236799 (c.2453delA), 19238096 (c.*3750delA),
coding sequence substitutions
premature termination by the nucleotide substitution	0
synonymous num	0
non-synonymous num	0
synonymous substitutions
non-synonymous substitutions
B6 transcript (ENSMUST00000064976)	MLVHTYSSMDRHDGVPSHSSRLSQLGSVSQGPYSSAPPLSHTPSSDFQPPYFPPPYQPLP YHQSQDPYSHVNDPYSLNPLHQPQQHPWGQRQRQEVGSEAGSLLPQPRAALPQLSGLDPR RDYHSVRRPDVLLHSAHHGLDAGMGDSLSLHGLGHPGMEDVQSVEDANNSGMNLLDQSVI KKVPVPPKSVTSLMMNKDGFLGGMSVNTGEVFCSVPGRLSLLSSTSKYKVTVGEVQRRLS PPECLNASLLGGVLRRAKSKNGGRSLRERLEKIGLNLPAGRRKAANVTLLTSLVEGEAVH LARDFGYICETEFPAKAVSEYLNRQHTDPSDLHSRKNMLLATKQLCKEFTDLLAQDRTPI GNSRPSPILEPGIQSCLTHFSLITHGFGAPAICAALTALQNYLTEALKGMDKMFLNNTTN RHTSGEGPGSKTGDKEEKHRK*
MSMv4 transcript	MLVHTYSSMDRHDGVPSHSSRLSQLGSVSQGPYSSAPPLSHTPSSDFQPPYFPPPYQPLP YHQSQDPYSHVNDPYSLNPLHQPQQHPWGQRQRQEVGSEAGSLLPQPRAALPQLSGLDPR RDYHSVRRPDVLLHSAHHGLDAGMGDSLSLHGLGHPGMEDVQSVEDANNSGMNLLDQSVI KKVPVPPKSVTSLMMNKDGFLGGMSVNTGEVFCSVPGRLSLLSSTSKYKVTVGEVQRRLS PPECLNASLLGGVLRRAKSKNGGRSLRERLEKIGLNLPAGRRKAANVTLLTSLVEGEAVH LARDFGYICETEFPAKAVSEYLNRQHTDPSDLHSRKNMLLATKQLCKEFTDLLAQDRTPI GNSRPSPILEPGIQSCLTHFSLITHGFGAPAICAALTALQNYLTEALKGMDKMFLNNTTN RHTSGEGPGSKTGDKEEKHRK*
homology	100.00 (442 / 442)

Exon Detail Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Tfap2b (ENSMUSG00000025927)
Transcript ID	ENSMUST00000064976


..........AGGGGGAGAGGGAAAAAATAGGAGGGAAGGTGAGAGAAGGGCCGGAAGGG
GGGTAGGAGAAAGAGGAGAGGAGAGTAGGCTTGGGGTGGGGGGTGGAGAGGAGAGAGAGT
GACTTGCTCCTGGCTGCCCAAATTTTCATCTGGAAAGCCCCGCGAACCGGCACCCAACGT
GGTAGAAGGAGCCTATTTCAGTCTGGACTACGGTTGAAGTTTAACAGAAATGGCAGTCAG
GCCAGTTGGACGGGTTCCTGATACATCCCAAAAGATTTTTCTGTTGCCCCTGGCTTTGCC
TGGAAAGGATACGTTTAGTGTGCTTGAAGACCAATCACATAGATTTTTAAATCTGGGTTT
TAAAATTTTCAGTCTGTAAGCACTAAAGAGAAAAAGGCTGCATTGTGTTCCAAAAGTCCC
CATCTCTCCTACGTTCTTCGAAAACAAAAACAAATAAACAAAAAAACTAAAACAAAACAA
AAAAACAAAAACAAAAAACCCCACAACTTGGTCTTCTACATTCAGAAAAAGTAGGGGTAG
CCCGCAGTAAACACACGTAAACAAACAGGCCCACCCATTTTACTCTCCCCCCCCCCTCCG
CCCCACCAGATAATCAGGCAGTGCCTTTCTAGTTTGCTTTTTAAATCTACACACCAAGCA
CCCAAGACTACCACCTCCTCCCCGTTGGGAAAGTTTTCCTCTCTATCCAAGAACACCTAC
ATTCTCTGGGAGACCCCAGCACACCGCCGAATCCAAAGAGCAGAGGCTGCCTTACAAGAG
CCAGAGAGAGTGTCCCCGCTCAGTTAATTGAAGTTCTGCCTCTTTCCTGCACAACTTTCC
CCCAAGTCTGCCTCTGCCAGCCCCCTTGTGTGATTACATCTAGTAATTCTCCACTGAATG
AACGTCATTTACAATAGTGGAGGAGCTCTGAGCTCGCTGCTGCTTCACGCTCCATTTGTC
CTCCATTCTCCCTTTAAAGTACTCGTGTAATATTAATAGTCATGAATATC
AATTATTATGAGGCGGTGTAGGCAAGCGGAGGGAGGAAGGGGCGCCTGAGCAGTCTGAGCCCAGCTTCGGGTGGAAGAGGACTGTTTCTGGAGCCCCAAAGAACCCTGCAGAAGAAAAGAGGCCAAAAAGACAGTAAGAGACGGATGAGCAGGTCTGCCTGTCTGTGACAGGCACCTCCAATCTTCTTGGAGGGGGGGATTTTTTTTTTTTTTTTTTTGATGGCTTGTCCTGGAAACATCTCAAGCCTAGCTCCTGTGTCCAGCTTGCTTCTCTGCTGGACTCCTTGATTATTTTTTTTTAATTCATTGTTATTTTGAGCAGTAACCAGGCTTTTTTTTCCAGATGTTAGTCCACACCTATTCATCCATG
GTGAGTTCGGATTCCCGTTGTACCA..........CCTTCGCTCCTCTCTCGCCTCCCAG
GACCGGCACGATGGCGTCCCAAGCCATAGCTCGAGACTCTCTCAACTGGGCTCTGTGTCCCAAGGACCCTACTCAAGCGCCCCGCCGCTGTCCCACACGCCATCATCGGACTTCCAGCCACCCTACTTTCCGCCCCCCTACCAGCCGCTACCCTACCACCAGAGTCAAGACCCGTACTCCCACGTCAACGATCCCTACTCCCTGAACCCTCTGCATCAGCCCCAGCAGCACCCGTGGGGGCAACGGCAACGCCAAGAAGTGGGCTCAGAAGCCGGCTCTCTCCTGCCCCAGCCCCGGGCAGCCTTGCCCCAGCTCTCCGGCCTTGATCCCCGAAGGGACTACCACTCTGTCCGCCGGCCGGACGTGCTGCTGCATTCCGCACATCACGGCCTGGACGCCGGCATGGGCGACAGCCTCTCGTTGCACGGCCTTGGGCATCCCGGCATGGAAGACGTGCAG
GTAATTCCAAACAAACAAAAATAAA..........AATGACAATGTTTTTATATTCACAG
TCAGTTGAAGATGCCAATAACAGCGGCATGAACCTATTGGACCAGTCAGTCATTAAAAAAG
GTATGGATTGTTTCTTCCAAAAGTA..........TTTCCCTTTCTCCATCTCTCCCTAG
TTCCTGTCCCTCCCAAATCTGTGACTTCTCTAATGATGAATAAAGATGGCTTCTTGGGAGGAATGTCAGTCAACACCGGCGAGGTATTTTGCTCAGTCCCGGGCCGTTTATCTCTACTCAGTTCAACTTCAAAGTACAAAGTCACTGTGGGCGAAGTTCAGAGAAGGCTCTCGCCCCCTGAATGCCTCAATGCATCTCTCCTGGGCGGCGTCCTCAGAAG
GTAAACAAAATAAAACAAACAACAA..........AGAATGTTAATTCTCACCACTGCAG
AGCCAAATCGAAAAATGGGGGGAGATCCTTGAGAGAAAGGCTAGAAAAAATCGGTTTGAATTTACCCGCGGGCAGGCGCAAAGCAGCAAATGTCACGTTACTCACCTCACTGGTAGAAG
GTAAGCAAGACTTGTGGCCATTTCA..........TGATTCTTTGTTGCTCTCCTTACAG
GGGAAGCTGTTCACTTAGCTCGGGATTTCGGGTATATTTGTGAAACAGAGTTTCCTGCTAAAGCCGTGTCCGAGTATTTGAACAGACAGCACACGGACCCCAGTGACCTGCACTCCAGAAAGAATATGCTGCTGGCCACCAA
GTGAGTTTCCAAGTCTCTGGGCGAT..........GTCTTCTTCCCTCACCCCTTCTCAG
GCAACTTTGTAAAGAATTTACGGATCTGCTGGCTCAGGACCGGACACCGATCGGAAACAGCAGGCCCAGCCCCATCCTGGAGCCGGGCATCCAAAGCTGTCTCACGCACTTCAGTCTCATCACGCACGGCTTCGGTGCCCCGGCCATTTGCGCTGCGCTCACGGCCCTGCAGAACTATCTCACCGAGGCGCTCAAAGGCATGGACAAGATGTTCTTGAACAACACCACTAACAGGCACACGTCTGGGGAAGGCCCAGGTAGTAAAACTGGCGACAAGGAGGAGAAACACAGGAAATGAAAAAAAAAAAATTAAAGAGAAGGAAAATGTTTTAAATACAAAAGGAAAACAGAAAAAAAATAAATTTAGCTTTAACATATTGGATTGGCTTTGGAGGAATTATATTAGGTAGAATACACATACAATCAAAATTTAAAAAGAAAGCTAAATAACGTTAAAAAAAAATAAACTGAGGCATACAACGGAGCAACAAACCGGCTCTCGGTGTCTATTTCAAGATACACGTGGAGACAACCGTCCGGATTTTCCACTTCGGTTCTTTCGAATTTAGTAATAC
AGATAAAAAAGGAAAACTATGAATCCCCCTTTTGGAAAATAAAACGTGAGACTAAACATG
AGAACACGCTAACTTATTGGAAGAAAATTGGAGACACGTTGGTGTCAATGCTTTTGAGAG
CTGGTTGACTGAGACGCACGAACTTTTAAATCTTTAATTTAATTTTTTTTTTTTTAAAGG
AAACTCTCGCACTTCGCGCCCTCCATTTCTCCTCATTCTCCTCACCGCTGCTTCCCTTTC
TCCCTTCCTCACAGCGATCCCGGAAATCTGCTGGGTGATCATGAGTGTGATTAGCTCTCT
GGTGTTAGCCCCTTTGGTGTCCAGACCACGCCTTGCGTTCCTAACTCCCCTGAGCCCAAC
TCCCCTACCTCCCCTCCACCCCCACCCTCACCCTCACCCCGCCCCGGTGTGTTTAATTAG
GGAGGCCAAGGGTGGGGGTGGGGGACAGGCAGAGGCTCTAGCTTTTGATCCAGGCTTGAG
AGCCCAGGCTCCCGCGGCAGAGAGGAAACCGATAAGTTGATTCATCTTGGTTCCTTTTAG
AAAATGTTACTTGTCTCCCAGACGTGACAGCACCTGTTCACAGAGAATATTACATTTGTT
ATACTTGTGTCATCTAGCGGTATAGTTTAAAAAGAAAGGAAAAGAAAGGAAAAAACAAAA
ACCAAAACATGAAAACTTTGATTAGTATGTAATTCCTTCGGAGGGGTATGTACCACTGAC
TCTCTTCTGTTTCCCCAAGCTTTACCCGCATGGTTTATGAGCTTCTTCAAGGAAGATTTG
GGCTTCCTACACAATCTATAAGGTACTGAGAAACAACAGCAACAACCTGATCCTTTTTAA
AGTTAAAGCCTGCCTGTCAGATTCGGCAGGTTTTACTTCTTTAAAGAAGCTCAAAGAGAA
TCATTTAGGAAGTGGCCAGTGTTGGGGGGAGCGGCTTTGGATTACTTGCTAACACACCTC
AACGCAGGAATTCCAGCAGGGGCGGGACAATGCAGAATGC..........

No.	Exon / Intron	Start	End	Start Phase	End Phase	Length	Sequence
	5' upstream sequence						..........AGGGGGAGAGGGAAAAAATAGGAGGGAAGGTGAGAGAAGGGCCGGAAGGG GGGTAGGAGAAAGAGGAGAGGAGAGTAGGCTTGGGGTGGGGGGTGGAGAGGAGAGAGAGT GACTTGCTCCTGGCTGCCCAAATTTTCATCTGGAAAGCCCCGCGAACCGGCACCCAACGT GGTAGAAGGAGCCTATTTCAGTCTGGACTACGGTTGAAGTTTAACAGAAATGGCAGTCAG GCCAGTTGGACGGGTTCCTGATACATCCCAAAAGATTTTTCTGTTGCCCCTGGCTTTGCC TGGAAAGGATACGTTTAGTGTGCTTGAAGACCAATCACATAGATTTTTAAATCTGGGTTT TAAAATTTTCAGTCTGTAAGCACTAAAGAGAAAAAGGCTGCATTGTGTTCCAAAAGTCCC CATCTCTCCTACGTTCTTCGAAAACAAAAACAAATAAACAAAAAAACTAAAACAAAACAA AAAAACAAAAACAAAAAACCCCACAACTTGGTCTTCTACATTCAGAAAAAGTAGGGGTAG CCCGCAGTAAACACACGTAAACAAACAGGCCCACCCATTTTACTCTCCCCCCCCCCTCCG CCCCACCAGATAATCAGGCAGTGCCTTTCTAGTTTGCTTTTTAAATCTACACACCAAGCA CCCAAGACTACCACCTCCTCCCCGTTGGGAAAGTTTTCCTCTCTATCCAAGAACACCTAC ATTCTCTGGGAGACCCCAGCACACCGCCGAATCCAAAGAGCAGAGGCTGCCTTACAAGAG CCAGAGAGAGTGTCCCCGCTCAGTTAATTGAAGTTCTGCCTCTTTCCTGCACAACTTTCC CCCAAGTCTGCCTCTGCCAGCCCCCTTGTGTGATTACATCTAGTAATTCTCCACTGAATG AACGTCATTTACAATAGTGGAGGAGCTCTGAGCTCGCTGCTGCTTCACGCTCCATTTGTC CTCCATTCTCCCTTTAAAGTACTCGTGTAATATTAATAGTCATGAATATC
1	EXON 1	19,212,054	19,212,423	-	0	370	AATTATTATGAGGCGGTGTAGGCAAGCGGAGGGAGGAAGGGGCGCCTGAGCAGTCTGAGC CCAGCTTCGGGTGGAAGAGGACTGTTTCTGGAGCCCCAAAGAACCCTGCAGAAGAAAAGA GGCCAAAAAGACAGTAAGAGACGGATGAGCAGGTCTGCCTGTCTGTGACAGGCACCTCCA ATCTTCTTGGAGGGGGGGATTTTTTTTTTTTTTTTTTTGATGGCTTGTCCTGGAAACATC TCAAGCCTAGCTCCTGTGTCCAGCTTGCTTCTCTGCTGGACTCCTTGATTATTTTTTTTT AATTCATTGTTATTTTGAGCAGTAACCAGGCTTTTTTTTCCAGATGTTAGTCCACACCTA TTCATCCATG
	INTRON 1 - 2	19,212,424	19,213,950			1,527	GTGAGTTCGGATTCCCGTTGTACCA..........CCTTCGCTCCTCTCTCGCCTCCCAG
2	EXON 2	19,213,951	19,214,409	0	0	459	GACCGGCACGATGGCGTCCCAAGCCATAGCTCGAGACTCTCTCAACTGGGCTCTGTGTCC CAAGGACCCTACTCAAGCGCCCCGCCGCTGTCCCACACGCCATCATCGGACTTCCAGCCA CCCTACTTTCCGCCCCCCTACCAGCCGCTACCCTACCACCAGAGTCAAGACCCGTACTCC CACGTCAACGATCCCTACTCCCTGAACCCTCTGCATCAGCCCCAGCAGCACCCGTGGGGG CAACGGCAACGCCAAGAAGTGGGCTCAGAAGCCGGCTCTCTCCTGCCCCAGCCCCGGGCA GCCTTGCCCCAGCTCTCCGGCCTTGATCCCCGAAGGGACTACCACTCTGTCCGCCGGCCG GACGTGCTGCTGCATTCCGCACATCACGGCCTGGACGCCGGCATGGGCGACAGCCTCTCG TTGCACGGCCTTGGGCATCCCGGCATGGAAGACGTGCAG
	INTRON 2 - 3	19,214,410	19,219,192			4,783	GTAATTCCAAACAAACAAAAATAAA..........AATGACAATGTTTTTATATTCACAG
3	EXON 3	19,219,193	19,219,253	0	1	61	TCAGTTGAAGATGCCAATAACAGCGGCATGAACCTATTGGACCAGTCAGTCATTAAAAAA G
	INTRON 3 - 4	19,219,254	19,226,435			7,182	GTATGGATTGTTTCTTCCAAAAGTA..........TTTCCCTTTCTCCATCTCTCCCTAG
4	EXON 4	19,226,436	19,226,655	1	2	220	TTCCTGTCCCTCCCAAATCTGTGACTTCTCTAATGATGAATAAAGATGGCTTCTTGGGAG GAATGTCAGTCAACACCGGCGAGGTATTTTGCTCAGTCCCGGGCCGTTTATCTCTACTCA GTTCAACTTCAAAGTACAAAGTCACTGTGGGCGAAGTTCAGAGAAGGCTCTCGCCCCCTG AATGCCTCAATGCATCTCTCCTGGGCGGCGTCCTCAGAAG
	INTRON 4 - 5	19,226,656	19,228,441			1,786	GTAAACAAAATAAAACAAACAACAA..........AGAATGTTAATTCTCACCACTGCAG
5	EXON 5	19,228,442	19,228,560	2	1	119	AGCCAAATCGAAAAATGGGGGGAGATCCTTGAGAGAAAGGCTAGAAAAAATCGGTTTGAA TTTACCCGCGGGCAGGCGCAAAGCAGCAAATGTCACGTTACTCACCTCACTGGTAGAAG
	INTRON 5 - 6	19,228,561	19,231,012			2,452	GTAAGCAAGACTTGTGGCCATTTCA..........TGATTCTTTGTTGCTCTCCTTACAG
6	EXON 6	19,231,013	19,231,154	1	2	142	GGGAAGCTGTTCACTTAGCTCGGGATTTCGGGTATATTTGTGAAACAGAGTTTCCTGCTA AAGCCGTGTCCGAGTATTTGAACAGACAGCACACGGACCCCAGTGACCTGCACTCCAGAA AGAATATGCTGCTGGCCACCAA
	INTRON 6 - 7	19,231,155	19,234,049			2,895	GTGAGTTTCCAAGTCTCTGGGCGAT..........GTCTTCTTCCCTCACCCCTTCTCAG
7	EXON 7	19,234,050	19,234,624	2	-	575	GCAACTTTGTAAAGAATTTACGGATCTGCTGGCTCAGGACCGGACACCGATCGGAAACAG CAGGCCCAGCCCCATCCTGGAGCCGGGCATCCAAAGCTGTCTCACGCACTTCAGTCTCAT CACGCACGGCTTCGGTGCCCCGGCCATTTGCGCTGCGCTCACGGCCCTGCAGAACTATCT CACCGAGGCGCTCAAAGGCATGGACAAGATGTTCTTGAACAACACCACTAACAGGCACAC GTCTGGGGAAGGCCCAGGTAGTAAAACTGGCGACAAGGAGGAGAAACACAGGAAATGAAA AAAAAAAAATTAAAGAGAAGGAAAATGTTTTAAATACAAAAGGAAAACAGAAAAAAAATA AATTTAGCTTTAACATATTGGATTGGCTTTGGAGGAATTATATTAGGTAGAATACACATA CAATCAAAATTTAAAAAGAAAGCTAAATAACGTTAAAAAAAAATAAACTGAGGCATACAA CGGAGCAACAAACCGGCTCTCGGTGTCTATTTCAAGATACACGTGGAGACAACCGTCCGG ATTTTCCACTTCGGTTCTTTCGAATTTAGTAATAC
	3' upstream sequence						AGATAAAAAAGGAAAACTATGAATCCCCCTTTTGGAAAATAAAACGTGAGACTAAACATG AGAACACGCTAACTTATTGGAAGAAAATTGGAGACACGTTGGTGTCAATGCTTTTGAGAG CTGGTTGACTGAGACGCACGAACTTTTAAATCTTTAATTTAATTTTTTTTTTTTTAAAGG AAACTCTCGCACTTCGCGCCCTCCATTTCTCCTCATTCTCCTCACCGCTGCTTCCCTTTC TCCCTTCCTCACAGCGATCCCGGAAATCTGCTGGGTGATCATGAGTGTGATTAGCTCTCT GGTGTTAGCCCCTTTGGTGTCCAGACCACGCCTTGCGTTCCTAACTCCCCTGAGCCCAAC TCCCCTACCTCCCCTCCACCCCCACCCTCACCCTCACCCCGCCCCGGTGTGTTTAATTAG GGAGGCCAAGGGTGGGGGTGGGGGACAGGCAGAGGCTCTAGCTTTTGATCCAGGCTTGAG AGCCCAGGCTCCCGCGGCAGAGAGGAAACCGATAAGTTGATTCATCTTGGTTCCTTTTAG AAAATGTTACTTGTCTCCCAGACGTGACAGCACCTGTTCACAGAGAATATTACATTTGTT ATACTTGTGTCATCTAGCGGTATAGTTTAAAAAGAAAGGAAAAGAAAGGAAAAAACAAAA ACCAAAACATGAAAACTTTGATTAGTATGTAATTCCTTCGGAGGGGTATGTACCACTGAC TCTCTTCTGTTTCCCCAAGCTTTACCCGCATGGTTTATGAGCTTCTTCAAGGAAGATTTG GGCTTCCTACACAATCTATAAGGTACTGAGAAACAACAGCAACAACCTGATCCTTTTTAA AGTTAAAGCCTGCCTGTCAGATTCGGCAGGTTTTACTTCTTTAAAGAAGCTCAAAGAGAA TCATTTAGGAAGTGGCCAGTGTTGGGGGGAGCGGCTTTGGATTACTTGCTAACACACCTC AACGCAGGAATTCCAGCAGGGGCGGGACAATGCAGAATGC..........

Sequence Detail Report

Gene Symbol (Gene ID)	Tfap2b (ENSMUSG00000025927)
Transcript ID	ENSMUST00000064976

		SNP Information
Strain :
Sequence Retrieve :
Exon translate : CDS Start ( 1 ) - End ( 442 ) -
Strand :	forward reverse
Show sequence :	nucleotide amino acid
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