MoG+ -Mouse Genome database with high added value-

Target CDS Information

Gene Symbol (Gene ID)

Kdelc1 (ENSMUSG00000026047)

Cross Reference

CCDS	CCDS14929.1
EMBL	AJ404004, AK007835, AK035899, ...show all
Fantom	1810049A15, 9630015O14, A430018K15, ...show all
GO	GO:0005788
goslim_goa	GO:0005575, GO:0005622, GO:0005623, ...show all
MGI_trans_name	Kdelc1-001
OTTP	OTTMUSP00000046494
OTTT	OTTMUST00000085981
protein_id	AAH23141.1, BAB25294.1, BAC29235.1, ...show all
RefSeq_mRNA	NM_023645.3

RefSeq_peptide	NP_076134
UCSC	uc007awb.1
UniParc	UPI0000028312
Uniprot/SWISSPROT	Q9JHP7
Vega_transcript	Kdelc1-001, OTTMUST00000085981
Vega_translation	179183, OTTMUSP00000046494

Definition

protein_id:ENSMUSP00000064500
translation:

MFSISLLSCLFLGTVPALAQTGGERRLSPEKSEIWGPGLKAHVVLPARYFYIRAVDTSGE
QFTSSPGEKVFQVKISAPDEQFTRVGVQVLDRKDGSFIVRYRMYASYRNLKIEVKHHGQH
VAESPYVLRGPVYHENCDCPLEDSAAWLREMNCSETISQIQKDLAHFPTVDPEKIAAEIP
KRFGQRQSLCHYTLKDNKVYIKTHGEHVGFRIFMDAILLSLTRKVRMPDVEFFVNLGDWP
LEKKKSNSNIQPIFSWCGSTESRDIVMPTYDLTDSVLETMGRVSLDMMSVQANTGPPWES
KNSTAVWRGRDSRKERLELVKLSRKHPELIDAAFTNFFFFKHDESLYGPIVKHISFFDFF
KHKYQINIDGTVAAYRLPYLLVGDSVVLKQDSIYYEHFYNELQPWKHYIPVKSNLSDLLE
KLKWAKEHDAEAKKIAKAGQEFARNNLMGDDIFCYYFKLFQGYANLQVSEPQIREGMKRV
EPQSEDDLFPCTCHRRKAKDEL

Chromosome

Length
Position(start - end)

11,411
44,107,087 - 44,118,499

Orient to Chromosome

minus

Link

Location : (1:44107087-44118499)
/

Detail Map

name	Gm29247 (ENSMUSG00000101104)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : Gm29247 note : predicted gene 29247 [Source:MGI Symbol;Acc:MGI:5579953]

name	Kdelc1 (ENSMUSG00000026047)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : Kdelc1 note : KDEL (Lys-Asp-Glu-Leu) containing 1 [Source:MGI Symbol;Acc:MGI:1919300]

name	Bivm (ENSMUSG00000041684)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : Bivm note : basic, immunoglobulin-like variable motif containing [Source:MGI Symbol;Acc:MGI:2179809]

name	Kdelc1 (ENSMUSG00000026047)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000065767

name	Kdelc1 (ENSMUSG00000026047)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000027213

name	Kdelc1 (ENSMUSG00000026047)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000152643

name	Bivm (ENSMUSG00000041684)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000155917

name	Bivm (ENSMUSG00000041684)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000035991

name	Bivm (ENSMUSG00000041684)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000114709

name	Bivm (ENSMUSG00000041684)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000129068

name	Kdelc1 (ENSMUSG00000026047) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS14929.1 Uniprot/SWISSPROT:Q9JHP7 RefSeq_peptide:NP_076134 RefSeq_mRNA:NM_023645.3 Vega_transcript:Kdelc1-001 Vega_transcript:OTTMUST00000085981 UCSC:uc007awb.1 Fantom:1810049A15 Fantom:9630015O14 Fantom:A430018K15 Fantom:E130009H02 Fantom:F630043J18 EMBL:AJ404004 EMBL:AK007835 EMBL:AK035899 EMBL:AK053315 EMBL:AK079701 EMBL:AK170300 EMBL:BC023141 GO:GO:0005788 MGI_trans_name:Kdelc1-001 Vega_translation:179183 Vega_translation:OTTMUSP00000046494 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005737 goslim_goa:GO:0005783 goslim_goa:GO:0043226 protein_id:AAH23141.1 protein_id:BAB25294.1 protein_id:BAC29235.1 protein_id:BAC35341.1 protein_id:BAC37727.1 protein_id:BAE41698.1 protein_id:CAC00650.1 OTTP:OTTMUSP00000046494 OTTT:OTTMUST00000085981 UniParc:UPI0000028312
definition	note : transcript_id=ENSMUST00000065767 protein_id : ENSMUSP00000064500 translation : MFSISLLSCLFLGTVPALAQTGGERRLSPEKSEIWGPGLKAHVVLPARYFYIRAVDTSGEQFTSSPGEKVFQVKISAPDEQFTRVGVQVLDRKDGSFIVRYRMYASYRNLKIEVKHHGQHVAESPYVLRGPVYHENCDCPLEDSAAWLREMNCSETISQIQKDLAHFPTVDPEKIAAEIPKRFGQRQSLCHYTLKDNKVYIKTHGEHVGFRIFMDAILLSLTRKVRMPDVEFFVNLGDWPLEKKKSNSNIQPIFSWCGSTESRDIVMPTYDLTDSVLETMGRVSLDMMSVQANTGPPWESKNSTAVWRGRDSRKERLELVKLSRKHPELIDAAFTNFFFFKHDESLYGPIVKHISFFDFFKHKYQINIDGTVAAYRLPYLLVGDSVVLKQDSIYYEHFYNELQPWKHYIPVKSNLSDLLEKLKWAKEHDAEAKKIAKAGQEFARNNLMGDDIFCYYFKLFQGYANLQVSEPQIREGMKRVEPQSEDDLFPCTCHRRKAKDEL

name	Kdelc1 (ENSMUSG00000026047) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Uniprot/SWISSPROT:Q9JHP7 Vega_transcript:Kdelc1-005 Vega_transcript:OTTMUST00000085985 UCSC:uc011wkc.1 Fantom:1810049A15 Fantom:9630015O14 Fantom:A430018K15 Fantom:E130009H02 Fantom:F630043J18 EMBL:AJ404004 EMBL:AK007835 EMBL:AK035899 EMBL:AK053315 EMBL:AK079701 EMBL:AK170300 EMBL:BC023141 GO:GO:0005788 MGI_trans_name:Kdelc1-005 Vega_translation:179184 Vega_translation:OTTMUSP00000046495 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005737 goslim_goa:GO:0005783 goslim_goa:GO:0043226 protein_id:AAH23141.1 protein_id:BAB25294.1 protein_id:BAC29235.1 protein_id:BAC35341.1 protein_id:BAC37727.1 protein_id:BAE41698.1 protein_id:CAC00650.1 OTTP:OTTMUSP00000046495 OTTT:OTTMUST00000085985 UniParc:UPI0000564506
definition	note : transcript_id=ENSMUST00000027213 protein_id : ENSMUSP00000027213 translation : MFSISLLSCLFLGTVPALAQTGGERRLSPEKSEIWGPGLKAHVVLPARYFYIRAVDTSGEQFTSSPGEKVFQVKISAPDEQFTRVGVQVLDRKDGSFIVRYRMYASYRNLKIEVKHHGQHVAESPYVLRGPVYHENCDCPLEDSAAWLREMNCSETISQIQKDLAHFPTVDPEKIAAEIPKRFGQRQSLCHYTLKDNKVYIKTHGEHVGFRIFMDAILLSLTRKVRMPDVEFFVNLGDWPLEKKKSNSNIQPIFSWCGSTESRDIVMPTYDLTDSVLETMGRVSLDMMSVQANTGPPWESKNSTAVWRGRDSRKERLELVKLSRKHPELIDAAFTNFFFFKHDESLYGPIVKHISFFDFFKAKKIAKAGQEFARNNLMGDDIFCYYFKLFQGYANLQVSEPQIREGMKRVEPQSEDDLFPCTCHRRKAKDEL

name	Kdelc1 (ENSMUSG00000026047) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:Kdelc1-006 Vega_transcript:OTTMUST00000086001 Uniprot/SPTREMBL:D6RE32 EMBL:AC123800 MGI_trans_name:Kdelc1-006 Vega_translation:179185 Vega_translation:OTTMUSP00000046511 OTTP:OTTMUSP00000046511 OTTT:OTTMUST00000086001 UniParc:UPI000198D19D
definition	note : transcript_id=ENSMUST00000152643 protein_id : ENSMUSP00000114287 translation : MFSISLLSCLFLGTVPALAQTGGERRLSPEKSEIWGPGLKAHVVLPARYFYIRAVDTSGEQFTSSPGEKVFQVKISAPDEQFTRVGVQVLDRKDGSFIVRYRMYASYRNLKIEVKHHGQHVAESPYVLRGLKKNFQG

name
type	misc_feature
link
xref
definition	note : contig AC123800.4 55563..177367(1)

name	Gm29247 (ENSMUSG00000101104)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000121129 Vega_transcript:OTTMUST00000121129 Clone_based_vega_transcript:RP24-343K18.1-002 MGI_trans_name:Gm29247-002 OTTT:OTTMUST00000121129
definition	note : processed_transcript note : transcript_id=ENSMUST00000148542

name	Gm29247 (ENSMUSG00000101104)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000121130 Vega_transcript:OTTMUST00000121130 Clone_based_vega_transcript:RP24-343K18.1-001 MGI_trans_name:Gm29247-001 OTTT:OTTMUST00000121130
definition	note : processed_transcript note : transcript_id=ENSMUST00000134195

name	Kdelc1 (ENSMUSG00000026047)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000085982 Vega_transcript:OTTMUST00000085982 MGI_trans_name:Kdelc1-002 OTTT:OTTMUST00000085982
definition	note : retained_intron note : transcript_id=ENSMUST00000141125

name	Kdelc1 (ENSMUSG00000026047)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000085983 Vega_transcript:OTTMUST00000085983 MGI_trans_name:Kdelc1-003 OTTT:OTTMUST00000085983
definition	note : retained_intron note : transcript_id=ENSMUST00000149665

name	Bivm (ENSMUSG00000041684)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000055466 Vega_transcript:OTTMUST00000055466 MGI_trans_name:Bivm-004 OTTT:OTTMUST00000055466
definition	note : processed_transcript note : transcript_id=ENSMUST00000138521

name	Bivm (ENSMUSG00000041684)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000121291 Vega_transcript:OTTMUST00000121291 MGI_trans_name:Bivm-007 OTTT:OTTMUST00000121291
definition	note : processed_transcript note : transcript_id=ENSMUST00000186280

Polymorphisms Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Kdelc1 (ENSMUSG00000026047)
Transcript ID	ENSMUST00000065767

Reports
substitution
cSNPs	4
Insertion	17
Deletion	26
SNPs	+1kb 44118837(c.-338C>T), 44118996(c.-497G>A), 44119126(c.-627T>C), 44119897(c.-1398G>A), 44119932(c.-1433A>T), 44120077(c.-1578G>A), 44120088(c.-1589T>C), 44120123(c.-1624T>C), 44120126(c.-1627T>C), 44120298(c.-1799C>T), 44120405(c.-1906A>G), 44120413(c.-1914T>C), 44120470(c.-1971A>T), 44120503(c.-2004G>C), 44120507(c.-2008T>A), 44120522(c.-2023C>T), 44120531(c.-2032A>G), 44120579(c.-2080C>T), 44120757(c.-2258A>G), 44120762(c.-2263T>C), 44120814(c.-2315C>T), 44121010(c.-2511T>C), 44121175(c.-2676C>G), 44121199(c.-2700G>T), 44121344(c.-2845C>T), 44121430(c.-2931G>A), 44121511(c.-3012G>A), 44121571(c.-3072A>G), 44121870(c.-3371G>A), 44121927(c.-3428G>C), 44121987(c.-3488C>T), 44122101(c.-3602C>T), 44122155(c.-3656G>A), 44122213(c.-3714C>T), 44122232(c.-3733T>C), 44122424(c.-3925G>A), 44122457(c.-3958C>G), 44122462(c.-3963C>T), 44122481(c.-3982C>T), 44122526(c.-4027A>T), 44122576(c.-4077A>G), 44122596(c.-4097A>G), 44122610(c.-4111A>G), 44122894(c.-4395A>T), 44123345(c.-4846G>A), 44123399(c.-4900T>A), 44123485(c.-4986G>A), 44123670(c.-5171T>C), 5'UTR 44118597(c.-98G>T), CDS 44112681(c.1047C>T), 44114736(c.552G>T), 44114745(c.543A>G), 44117192(c.234C>G), 3'UTR 44106604(c.483A>T), 44107061(c.26C>G), INTRON 44107279(c.1492-175C>T), 44107304(c.1492-200A>G), 44107324(c.1492-220C>T), 44107446(c.1491+319G>C), 44108338(c.1384-466T>C), 44108642(c.1384-770T>C), 44108695(c.1384-823A>T), 44108752(c.1384-880T>C), 44108932(c.1384-1060G>A), 44109123(c.1383+871A>G), 44109128(c.1383+866A>G), 44109192(c.1383+802G>T), 44109451(c.1383+543C>T), 44109466(c.1383+528C>T), 44109749(c.1383+245T>C), 44109789(c.1383+205A>G), 44109801(c.1383+193G>A), 44109835(c.1383+159A>G), 44109872(c.1383+122G>A), 44109881(c.1383+113G>A), 44109895(c.1383+99T>G), 44109901(c.1383+93T>G), 44110148(c.1294-65G>C), 44110253(c.1294-170A>G), 44110268(c.1294-185C>A), 44110382(c.1294-299A>G), 44110422(c.1293+313A>T), 44110490(c.1293+245T>C), 44110500(c.1293+235G>A), 44110527(c.1293+208T>C), 44110637(c.1293+98T>C), 44110640(c.1293+95C>A), 44110690(c.1293+45G>C), 44110699(c.1293+36A>T), 44110724(c.1293+11C>T), 44111037(c.1084-93G>T), 44111173(c.1084-229A>G), 44111174(c.1084-230A>T), 44111231(c.1084-287G>T), 44111311(c.1084-367A>G), 44111769(c.1084-825G>A), 44111811(c.1083+834G>A), 44112041(c.1083+604G>A), 44112189(c.1083+456G>A), 44112301(c.1083+344A>G), 44112302(c.1083+343C>A), 44112338(c.1083+307C>T), 44112345(c.1083+300C>T), 44112539(c.1083+106T>C), 44113282(c.673-107G>A), 44113368(c.673-193T>C), 44113467(c.673-292T>G), 44113497(c.673-322G>A), 44113615(c.673-440A>G), 44113620(c.673-445T>A), 44113626(c.673-451T>C), 44113985(c.672+456A>G), 44114100(c.672+341T>G), 44114154(c.672+287C>T), 44114167(c.672+274G>C), 44114216(c.672+225A>T), 44114226(c.672+215C>T), 44114255(c.672+186T>A), 44114352(c.672+89G>A), 44114601(c.595-83G>T), 44114609(c.594+85T>C), 44114615(c.594+79T>A), 44114952(c.389-53G>T), 44114997(c.389-98C>A), 44115023(c.389-124G>A), 44115036(c.389-137G>A), 44115038(c.389-139T>G), 44115047(c.389-148A>T), 44115055(c.389-156A>G), 44115210(c.389-311T>A), 44115249(c.389-350T>A), 44115358(c.389-459G>A), 44115359(c.389-460T>C), 44115392(c.389-493C>T), 44115525(c.389-626G>A), 44115558(c.389-659A>T), 44115581(c.389-682G>A), 44115606(c.389-707C>T), 44115619(c.389-720T>C), 44115680(c.389-781T>C), 44115687(c.389-788A>G), 44115705(c.389-806A>G), 44115732(c.389-833A>G), 44115733(c.389-834C>T), 44115791(c.389-892A>C), 44115837(c.389-938T>G), 44115846(c.389-947T>C), 44116078(c.388+960G>T), 44116210(c.388+828A>G), 44116212(c.388+826C>T), 44116213(c.388+825A>G), 44116221(c.388+817C>T), 44116239(c.388+799T>C), 44116243(c.388+795G>A), 44116280(c.388+758G>A), 44116319(c.388+719A>G), 44116406(c.388+632G>A), 44116433(c.388+605A>G), 44116554(c.388+484G>T), 44116646(c.388+392G>A), 44117278(c.183-35A>T), 44117314(c.183-71C>G), 44117380(c.183-137G>A), 44117456(c.183-213A>G), 44117550(c.183-307C>T), 44117566(c.183-323A>G), 44117572(c.183-329G>T), 44117659(c.183-416A>T), 44117692(c.183-449C>T), 44117696(c.183-453A>G), 44117897(c.182+421C>T), 44117925(c.182+393C>T), 44118060(c.182+258A>G), 44118127(c.182+191A>C), 44118167(c.182+151C>T), 44118189(c.182+129T>G), -1kb 44101564(c.5523G>C), 44101622(c.5465C>G), 44101767(c.5320T>C), 44102119(c.4968T>C), 44102167(c.4920A>G), 44102512(c.4575A>G), 44102572(c.4515C>G), 44102652(c.4435T>C), 44102714(c.4373G>T), 44102746(c.4341A>G), 44102751(c.4336T>C), 44102784(c.4303G>A), 44103095(c.3992C>T), 44103137(c.3950T>C), 44103483(c.3604T>G), 44103569(c.3518G>A), 44103768(c.3319T>G), 44104018(c.3069G>A), 44104079(c.3008T>C), 44104219(c.2868G>A), 44104292(c.2795G>A), 44104306(c.2781G>A), 44104313(c.2774G>C), 44104360(c.2727A>G), 44104383(c.2704A>G), 44104452(c.2635A>G), 44104459(c.2628T>C), 44104485(c.2602C>T), 44104526(c.2561A>C), 44104865(c.2222C>T), 44104927(c.2160A>G), 44105617(c.1470A>G), 44105629(c.1458G>A), 44105654(c.1433G>T), 44105660(c.1427G>T), 44105703(c.1384A>G), 44105717(c.1370T>A), 44106078(c.1009T>G), 44106206(c.881A>G), 44106248(c.839T>C), 44106468(c.619C>T), 44106513(c.574C>T),
Insertions	+1kb 44120341 (c.-1843_-1842insCCCC), 5'UTR CDS 3'UTR INTRON 44109725 (c.1383+268dupA), 44109874 (c.1383+119_1383+120insT), 44111650 (c.1084-707_1084-706insT), 44114402 (c.672+38dupA), 44115778 (c.389-880_389-879insG), 44115822 (c.389-924_389-923insAA), 44116434 (c.388+603_388+604insTT), 44116923 (c.388+114dupA), -1kb 44101591 (c.5495_5496insT), 44103500 (c.3585_3586dupAA), 44104048 (c.3036_3038dupGTT), 44104666 (c.2420dupT), 44105390 (c.1696_1697insCAGGCCA), 44105923 (c.1162_1163dupTA), 44105927 (c.1159_1160insTAA), 44106224 (c.862dupA),
Deletions	+1kb 44119041 (c.-544_-543delGA), 44119561 (c.-1064_-1063delTC), 44119796 (c.-1302_-1298delGGGGG), 44121757 (c.-3260_-3259delAA), 44122603 (c.-4106_-4105delCT), 5'UTR CDS 3'UTR INTRON 44107208 (c.1492-105delT), 44107570 (c.1491+192_1491+194delTTG), 44109890 (c.1383+103delT), 44110693 (c.1293+41delT), 44111670 (c.1084-727delG), 44111889 (c.1083+754_1083+755delAT), 44112091 (c.1083+553delA), 44112141 (c.1083+503delC), 44112143 (c.1083+501delC), 44113390 (c.673-216delC), 44114191 (c.672+241_672+249delGGCCACACT), 44114308 (c.672+131_672+132delTA), 44115811 (c.389-913delT), 44115909 (c.389-1012_389-1011delCT), 44115912 (c.389-1015_389-1014delTC), 44116399 (c.388+638delA), 44116499 (c.388+537_388+538delAA), -1kb 44101650 (c.5436delG), 44101875 (c.5211delT), 44103842 (c.3244delA), 44105877 (c.1208_*1209delTT),
coding sequence substitutions
premature termination by the nucleotide substitution	0
synonymous num	4
non-synonymous num	0
synonymous substitutions	44112681 (p.Pro349Pro), 44114736 (p.Gly184Gly), 44114745 (p.Lys181Lys), 44117192 (p.Pro78Pro),
non-synonymous substitutions
B6 transcript (ENSMUST00000065767)	MFSISLLSCLFLGTVPALAQTGGERRLSPEKSEIWGPGLKAHVVLPARYFYIRAVDTSGE QFTSSPGEKVFQVKISAPDEQFTRVGVQVLDRKDGSFIVRYRMYASYRNLKIEVKHHGQH VAESPYVLRGPVYHENCDCPLEDSAAWLREMNCSETISQIQKDLAHFPTVDPEKIAAEIP KRFGQRQSLCHYTLKDNKVYIKTHGEHVGFRIFMDAILLSLTRKVRMPDVEFFVNLGDWP LEKKKSNSNIQPIFSWCGSTESRDIVMPTYDLTDSVLETMGRVSLDMMSVQANTGPPWES KNSTAVWRGRDSRKERLELVKLSRKHPELIDAAFTNFFFFKHDESLYGPIVKHISFFDFF KHKYQINIDGTVAAYRLPYLLVGDSVVLKQDSIYYEHFYNELQPWKHYIPVKSNLSDLLE KLKWAKEHDAEAKKIAKAGQEFARNNLMGDDIFCYYFKLFQGYANLQVSEPQIREGMKRV EPQSEDDLFPCTCHRRKAKDEL*
MSMv4 transcript	MFSISLLSCLFLGTVPALAQTGGERRLSPEKSEIWGPGLKAHVVLPARYFYIRAVDTSGE QFTSSPGEKVFQVKISAPDEQFTRVGVQVLDRKDGSFIVRYRMYASYRNLKIEVKHHGQH VAESPYVLRGPVYHENCDCPLEDSAAWLREMNCSETISQIQKDLAHFPTVDPEKIAAEIP KRFGQRQSLCHYTLKDNKVYIKTHGEHVGFRIFMDAILLSLTRKVRMPDVEFFVNLGDWP LEKKKSNSNIQPIFSWCGSTESRDIVMPTYDLTDSVLETMGRVSLDMMSVQANTGPPWES KNSTAVWRGRDSRKERLELVKLSRKHPELIDAAFTNFFFFKHDESLYGPIVKHISFFDFF KHKYQINIDGTVAAYRLPYLLVGDSVVLKQDSIYYEHFYNELQPWKHYIPVKSNLSDLLE KLKWAKEHDAEAKKIAKAGQEFARNNLMGDDIFCYYFKLFQGYANLQVSEPQIREGMKRV EPQSEDDLFPCTCHRRKAKDEL*
homology	100.00 (503 / 503)

Exon Detail Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Kdelc1 (ENSMUSG00000026047)
Transcript ID	ENSMUST00000065767


..........GGGGGGGGGGGGCAGGGGGAAAAAGAATCCCCTTGCCTTGGCTCACAACC
AGGCCGTCTATGTTTTCCACGCCCCTTACCCCGTGGAGGGAGGACAAAGCCTGCTACTCC
TCTTGACCTCACTGGCCGAGAAGCGAGGGTGCAAAGAGAGGATGGCCACTGCAGGCCGGG
TGCCTGGGATCCGCTAGCGCAGCGTGGAGACCCGCTCCTGAAGAGAGTACAGGGATACCC
ACGGATGCACCCCCCTCAGGCCGAGCTTTCTTCTGGTGATTTCTATCCCTTACATCTCTC
CTCAGAGACTCAGCTCGACCCAGATCCTTCCAGGGGCGCGGCGGGGTGGGGGTGGGGGTG
GGGGTTGTCCTGCAACGAGGCAGTGACGGCGCTACGGAGAGGCGGAGCGCACCGCAGTGC
CTGGGCTAGGCCCTCCGCTGGGGAATACCTCTGTTCCTGTTGGGTCCCGGAACTCTGGTG
CTGGAAGGCAACACCAGATCTGCATCCTCAAGTCTCCTACCCAAGGCCCAGAATCTTTCG
TCCCATTGAGCGCACAAGAATAGCACCGAGTGACTGGGTATCATTGATAACACCTAGCCT
CCCTTTCAGCGTTTACTATATACCTGCCATTTGCGGTGGATACCTTGAACAAAATATAAG
TTGGGAAATCTTTGCTGTGACTCCAGACATGCCAGTTGCGCAACTGTAGTATTTAAGGTT
GCCAGAAAGCCGTGCTCCAAAGTTGAAAAAAGAAGTAGAAAGGAAGGTAGGGGGGGAGAA
AGGAGGAGGGAGAGTGAGGGACGGAGGGAAGGGACGAAAGTAATTGGGGGTGAACTCCTG
GCAGGATTTCCGCTAGTCCTATGGCGGACTACATATCCCAGGAAGCTAAGGGGCCCGGGA
CGCGTTTTCCACTCTGACCCACTCATCCACTAGCAGAAGACTTTACTAAGACTGGTCACA
GCGCAGGCCAATCCTTCTCCTTTCACCTTGGCTAGAACTTGCGACGGATT
CGTTCCCAAAGTGATGCTCTAGTGGCAAGAGTAACACAAGTTTGTCATTGTCCGGAGAAAGTGGAGCCTGCGGTTCTTAACCAGGTTCAGCAGAACGTGTGGCATCCTTCTCCTGGACATGCCACCGCTCGGGTTGTGACATTCTTGGGCACAGCATAGTCCCACGCGCGGACCCCGCACGTCAAGCGACACTTTAGGGACTTTGACTGCTTCTAGGACTGACCACCGTCCTCCTACCTACCCAGGCTAGCTCCGTCCACTTAGCACGTTTGCATTTATTCGTGGATCTTCCAAGACTCGGTCTTGTAAATGTTCAGCATTTCGCTGCTTTCCTGCCTTTTTCTGGGGACTGTGCCAGCACTTGCCCAGACCGGCGGAGAGAGGAGGCTGAGCCCAGAGAAGAGCGAAATATGGGGACCCGGGCTAAAAGCACACGTGGTCCTTCCTGCCCGCTATTTCTACATTCGGGCGGTGGATACCTCAGGGGAACA
GTAAGTGGAGAAATGACTCCTCAAC..........CATCTCTCATTGTTTTCCATAACAG
GTTTACATCTTCTCCAGGTGAAAAGGTGTTCCAGGTTAAAATCTCAGCACCGGATGAGCAGTTCACGAGAGTTGGTGTCCAGGTTTTAGATCGAAAGGACGGTTCCTTCATAGTAAGATACAGAATGTATGCCAGCTACAGAAATCTGAAGATAGAGGTTAAACACCATGGGCAACATGTTGCCGAGTCTCCTTATGTTTTAAGAG
GTATTTTGAAACAAAAATTTATGGT..........TATACTGCTGTCTATCTGTAAATAG
GACCAGTTTACCATGAGAACTGTGACTGTCCTTTGGAAGACAGTGCAGCCTGGCTACGGGAGATGAACTGTTCGGAAACAATCTCTCAGATTCAGAAAGATCTGGCACATTTCCCTACTGTTGATCCTGAAAAGATTGCAGCAGAAATCCCAAAGCGATTTGGTCAGAGGCAAAGCCTGTGTCACTATACCTTAAAGGACAATAAG
GTATAATATGATTGAGGTTTGCTTG..........TAGTAAATGTCAAATTCTCTTCTAG
GTTTATATCAAGACTCATGGTGAGCACGTTGGCTTTAGGATTTTCATGGATGCAATACTACTTTCATTGACTAGAAAG
GTTAGTATATTTTCTCTGCATTATG..........AAACTCTTGTTATCCCCACCTCTAG
GTGAGGATGCCAGATGTGGAATTTTTTGTTAATTTGGGAGACTGGCCTTTGGAAAAAAAGAAATCCAACTCCAACATTCAGCCGATCTTTTCCTGGTGTGGCTCCACAGAGTCCAGGGATATTGTGATGCCTACCTACGACCTGACTGACTCTGTTCTAGAAACCATGGGCCG
GTGAGAGATGATCAGGGTTGACCCC..........ACATGTTCTGTTTTCTGTCTTCCAG
AGTAAGTCTGGATATGATGTCGGTGCAAGCTAACACAGGGCCTCCCTGGGAAAGTAAGAATTCCACAGCTGTCTGGAGGGGCCGAGACAGCCGCAAAGAGAGACTAGAGCTGGTGAAGCTTAGCAGAAAACACCCAGAGCTCATCGATGCTGCTTTCACAAATTTTTTCTTCTTTAAACATGACGAAAGCCTGTATGGGCCTATCGTGAAACACATTTCATTTTTTGATTTCTTCAAG
GTATGATATCATCTATGGACATCCC..........GCTCTTACATGCTCCTATTTTGCAG
CACAAGTATCAGATAAATATTGATGGCACTGTGGCAGCGTACCGATTGCCCTACCTGCTGGTGGGTGACAGTGTCGTTCTGAAGCAGGACTCCATCTACTATGAACACTTTTACAATGAGCTGCAGCCCTGGAAACATTACATTCCAGTCAAAAGTAACCTAAGCGATCTGCTAGAAAAGCTCAAGTGGGCAAAAGAGCATGATGCAGAG
GTAAGATCAGTTGTCAAGAAGCCTT..........TTGTCTGGTTTTTAAATTCCTATAG
GCCAAGAAGATAGCAAAAGCAGGACAAGAATTTGCGAGAAATAATCTAATGGGTGATGATATATTCTGTTATTACTTCAAACTGTTCCAG
GTTAGTATTTTCGCACACACATATG..........ATGCTTTTGTATTGCTATTTAACAG
GGCTATGCAAATTTACAAGTGAGCGAGCCCCAAATTCGAGAGGGTATGAAGAGGGTAGAGCCACAATCCGAGGATGACCTCTTCCCTTGCACGTGCCATAGGAGAAAG
GTAACAAGACTCACTTTCTGCCTCC..........TTAACATTTTTCTTCTTAATTACAG
GCCAAAGATGAACTCTGAGAAGCAAAATATCTTCTGTTCAAATGATGGTGCTCTGAGGACACTTTACTATAAAGGTTATTTTTAAGTATGTTTCACAGACAATGTCAAATTTACGTGTGCCCATTCACTTTCTCACAGTATTTCGTCTTATGCAGTGTTCCCATGACTGTCTTTTACATCACATTTTAAAATTTTTATAATAAAACTGCCTTTATTTTAAGGGTCTGTTTTGTTACAGTTATTACCTATGAGCAGAAGAAATAGGCGAGTTTGGGTCCTTGATTCTGGTGAGTGCTCTGATTCAAACAGGCCTCCAAAAGCAAAACAAAACTCAGCCAATTGTGGTGGTTCATGCCTATAATCCTAGCACTTCAGAGGTTAAGACAAGAAGATTCTGTGAGTTCAAGGCCAGTCTGAGCTACATAGTAAGTTGGAAGACAATAAGACTCTGTTTTAAAATGCAAATGACTCTGTCTGTTTTAAGCTCTTTTTCTTTTGGATTAACTACTCATTGAGTCTCAGTCAAACCTCATTCTAATAAAACATGCTAGAGCTGCCT
TTATCTGGCCTCTGCCTCTGTTGGTAGTCAAATCTATTACCACTTATTACAAATCCTGTC
ACCGCCCACCCAATGCTTGTTTCCCTCCGGCCCTGGTATTTGTTTTTCCCTTTTTCTGGA
AGTCAGGATCGACTCTACTTTCTCTAGCTCCTTTCAGGAATGTAACACCTCTGATTCTTT
ATATTATGTAGTCGCCATACTTTGCAGTAGTTCCCTGTAGACTCTCCCCTAATCCTCAGT
CCTTAAGCATCTTGATTACAAAGATGATTCTTTTGGGGTCTAACAGGTTTCCCTGATCGT
GGAAGGGACAACAAATTTTAATGGGTCAATAAAATGACAGTTAGCTTGAAAATGCAATTA
AAGAACTAGCTAGGGGCCAGGCATGCTAGTCCATGAGTCCCACCACTGAAGTTTCTCCTC
CAGTTAGATAAAGCTCACACACAACAGTCAACCTACTTTACTCCAAGGTCACTGATTTTA
ATGTTAATCTCTTTGAAAAATACCCTGACTGAAACATCCAAGATGTTTGACCTTATGTTG
GGGATGGCCCAACCAAGTGAACCATTACTAATGGGGATTCATACAATAAATGTTGAACAC
ATAATATGCATTCAGTTATATAATACCAAGCTCCAATAAAAGAGCTTTAAATAGCCACTG
GTTGGGTTTTTTTGGTTTTGTTTTGTTTTGTTTTGTTTTTCAGATATCTACTGGAACTGT
TCATATTTTCTTTTTCTGTTTTTGTTGCATTCATTTACAGTGAATTGTACTAATGACGTT
TTAATTTTGAAGCAATGTAAAAAGCCATGCAAATTACGTATTATTTATATGGTCATGGCT
GAGTTGTTATAGTAATTGATTCAGACATTCACTGTTTTGTTTTTGTTTTTGTTTTTTTGC
AAGTTTTACTTCTTCAAAATTTTATGCAGTGTGGTCATTTAATAACTTATGTTGTATTTT
TCTTTTTCTTTCTTTCTTTTTTTTTTCTTTGACATGGTCT..........

No.	Exon / Intron	Start	End	Start Phase	End Phase	Length	Sequence
	5' upstream sequence						..........GGGGGGGGGGGGCAGGGGGAAAAAGAATCCCCTTGCCTTGGCTCACAACC AGGCCGTCTATGTTTTCCACGCCCCTTACCCCGTGGAGGGAGGACAAAGCCTGCTACTCC TCTTGACCTCACTGGCCGAGAAGCGAGGGTGCAAAGAGAGGATGGCCACTGCAGGCCGGG TGCCTGGGATCCGCTAGCGCAGCGTGGAGACCCGCTCCTGAAGAGAGTACAGGGATACCC ACGGATGCACCCCCCTCAGGCCGAGCTTTCTTCTGGTGATTTCTATCCCTTACATCTCTC CTCAGAGACTCAGCTCGACCCAGATCCTTCCAGGGGCGCGGCGGGGTGGGGGTGGGGGTG GGGGTTGTCCTGCAACGAGGCAGTGACGGCGCTACGGAGAGGCGGAGCGCACCGCAGTGC CTGGGCTAGGCCCTCCGCTGGGGAATACCTCTGTTCCTGTTGGGTCCCGGAACTCTGGTG CTGGAAGGCAACACCAGATCTGCATCCTCAAGTCTCCTACCCAAGGCCCAGAATCTTTCG TCCCATTGAGCGCACAAGAATAGCACCGAGTGACTGGGTATCATTGATAACACCTAGCCT CCCTTTCAGCGTTTACTATATACCTGCCATTTGCGGTGGATACCTTGAACAAAATATAAG TTGGGAAATCTTTGCTGTGACTCCAGACATGCCAGTTGCGCAACTGTAGTATTTAAGGTT GCCAGAAAGCCGTGCTCCAAAGTTGAAAAAAGAAGTAGAAAGGAAGGTAGGGGGGGAGAA AGGAGGAGGGAGAGTGAGGGACGGAGGGAAGGGACGAAAGTAATTGGGGGTGAACTCCTG GCAGGATTTCCGCTAGTCCTATGGCGGACTACATATCCCAGGAAGCTAAGGGGCCCGGGA CGCGTTTTCCACTCTGACCCACTCATCCACTAGCAGAAGACTTTACTAAGACTGGTCACA GCGCAGGCCAATCCTTCTCCTTTCACCTTGGCTAGAACTTGCGACGGATT
1	EXON 1	44,118,318	44,118,808	-	2	491	CGTTCCCAAAGTGATGCTCTAGTGGCAAGAGTAACACAAGTTTGTCATTGTCCGGAGAAA GTGGAGCCTGCGGTTCTTAACCAGGTTCAGCAGAACGTGTGGCATCCTTCTCCTGGACAT GCCACCGCTCGGGTTGTGACATTCTTGGGCACAGCATAGTCCCACGCGCGGACCCCGCAC GTCAAGCGACACTTTAGGGACTTTGACTGCTTCTAGGACTGACCACCGTCCTCCTACCTA CCCAGGCTAGCTCCGTCCACTTAGCACGTTTGCATTTATTCGTGGATCTTCCAAGACTCG GTCTTGTAAATGTTCAGCATTTCGCTGCTTTCCTGCCTTTTTCTGGGGACTGTGCCAGCA CTTGCCCAGACCGGCGGAGAGAGGAGGCTGAGCCCAGAGAAGAGCGAAATATGGGGACCC GGGCTAAAAGCACACGTGGTCCTTCCTGCCCGCTATTTCTACATTCGGGCGGTGGATACC TCAGGGGAACA
	INTRON 1 - 2	44,117,244	44,118,317			1,074	GTAAGTGGAGAAATGACTCCTCAAC..........CATCTCTCATTGTTTTCCATAACAG
2	EXON 2	44,117,038	44,117,243	2	1	206	GTTTACATCTTCTCCAGGTGAAAAGGTGTTCCAGGTTAAAATCTCAGCACCGGATGAGCA GTTCACGAGAGTTGGTGTCCAGGTTTTAGATCGAAAGGACGGTTCCTTCATAGTAAGATA CAGAATGTATGCCAGCTACAGAAATCTGAAGATAGAGGTTAAACACCATGGGCAACATGT TGCCGAGTCTCCTTATGTTTTAAGAG
	INTRON 2 - 3	44,114,900	44,117,037			2,138	GTATTTTGAAACAAAAATTTATGGT..........TATACTGCTGTCTATCTGTAAATAG
3	EXON 3	44,114,694	44,114,899	1	0	206	GACCAGTTTACCATGAGAACTGTGACTGTCCTTTGGAAGACAGTGCAGCCTGGCTACGGG AGATGAACTGTTCGGAAACAATCTCTCAGATTCAGAAAGATCTGGCACATTTCCCTACTG TTGATCCTGAAAAGATTGCAGCAGAAATCCCAAAGCGATTTGGTCAGAGGCAAAGCCTGT GTCACTATACCTTAAAGGACAATAAG
	INTRON 3 - 4	44,114,519	44,114,693			175	GTATAATATGATTGAGGTTTGCTTG..........TAGTAAATGTCAAATTCTCTTCTAG
4	EXON 4	44,114,441	44,114,518	0	0	78	GTTTATATCAAGACTCATGGTGAGCACGTTGGCTTTAGGATTTTCATGGATGCAATACTA CTTTCATTGACTAGAAAG
	INTRON 4 - 5	44,113,176	44,114,440			1,265	GTTAGTATATTTTCTCTGCATTATG..........AAACTCTTGTTATCCCCACCTCTAG
5	EXON 5	44,113,003	44,113,175	0	2	173	GTGAGGATGCCAGATGTGGAATTTTTTGTTAATTTGGGAGACTGGCCTTTGGAAAAAAAG AAATCCAACTCCAACATTCAGCCGATCTTTTCCTGGTGTGGCTCCACAGAGTCCAGGGAT ATTGTGATGCCTACCTACGACCTGACTGACTCTGTTCTAGAAACCATGGGCCG
	INTRON 5 - 6	44,112,883	44,113,002			120	GTGAGAGATGATCAGGGTTGACCCC..........ACATGTTCTGTTTTCTGTCTTCCAG
6	EXON 6	44,112,645	44,112,882	2	0	238	AGTAAGTCTGGATATGATGTCGGTGCAAGCTAACACAGGGCCTCCCTGGGAAAGTAAGAA TTCCACAGCTGTCTGGAGGGGCCGAGACAGCCGCAAAGAGAGACTAGAGCTGGTGAAGCT TAGCAGAAAACACCCAGAGCTCATCGATGCTGCTTTCACAAATTTTTTCTTCTTTAAACA TGACGAAAGCCTGTATGGGCCTATCGTGAAACACATTTCATTTTTTGATTTCTTCAAG
	INTRON 6 - 7	44,110,945	44,112,644			1,700	GTATGATATCATCTATGGACATCCC..........GCTCTTACATGCTCCTATTTTGCAG
7	EXON 7	44,110,735	44,110,944	0	0	210	CACAAGTATCAGATAAATATTGATGGCACTGTGGCAGCGTACCGATTGCCCTACCTGCTG GTGGGTGACAGTGTCGTTCTGAAGCAGGACTCCATCTACTATGAACACTTTTACAATGAG CTGCAGCCCTGGAAACATTACATTCCAGTCAAAAGTAACCTAAGCGATCTGCTAGAAAAG CTCAAGTGGGCAAAAGAGCATGATGCAGAG
	INTRON 7 - 8	44,110,084	44,110,734			651	GTAAGATCAGTTGTCAAGAAGCCTT..........TTGTCTGGTTTTTAAATTCCTATAG
8	EXON 8	44,109,994	44,110,083	0	0	90	GCCAAGAAGATAGCAAAAGCAGGACAAGAATTTGCGAGAAATAATCTAATGGGTGATGAT ATATTCTGTTATTACTTCAAACTGTTCCAG
	INTRON 8 - 9	44,107,873	44,109,993			2,121	GTTAGTATTTTCGCACACACATATG..........ATGCTTTTGTATTGCTATTTAACAG
9	EXON 9	44,107,765	44,107,872	0	0	108	GGCTATGCAAATTTACAAGTGAGCGAGCCCCAAATTCGAGAGGGTATGAAGAGGGTAGAG CCACAATCCGAGGATGACCTCTTCCCTTGCACGTGCCATAGGAGAAAG
	INTRON 9 - 10	44,107,105	44,107,764			660	GTAACAAGACTCACTTTCTGCCTCC..........TTAACATTTTTCTTCTTAATTACAG
10	EXON 10	44,106,546	44,107,104	0	-	559	GCCAAAGATGAACTCTGAGAAGCAAAATATCTTCTGTTCAAATGATGGTGCTCTGAGGAC ACTTTACTATAAAGGTTATTTTTAAGTATGTTTCACAGACAATGTCAAATTTACGTGTGC CCATTCACTTTCTCACAGTATTTCGTCTTATGCAGTGTTCCCATGACTGTCTTTTACATC ACATTTTAAAATTTTTATAATAAAACTGCCTTTATTTTAAGGGTCTGTTTTGTTACAGTT ATTACCTATGAGCAGAAGAAATAGGCGAGTTTGGGTCCTTGATTCTGGTGAGTGCTCTGA TTCAAACAGGCCTCCAAAAGCAAAACAAAACTCAGCCAATTGTGGTGGTTCATGCCTATA ATCCTAGCACTTCAGAGGTTAAGACAAGAAGATTCTGTGAGTTCAAGGCCAGTCTGAGCT ACATAGTAAGTTGGAAGACAATAAGACTCTGTTTTAAAATGCAAATGACTCTGTCTGTTT TAAGCTCTTTTTCTTTTGGATTAACTACTCATTGAGTCTCAGTCAAACCTCATTCTAATA AAACATGCTAGAGCTGCCT
	3' upstream sequence						TTATCTGGCCTCTGCCTCTGTTGGTAGTCAAATCTATTACCACTTATTACAAATCCTGTC ACCGCCCACCCAATGCTTGTTTCCCTCCGGCCCTGGTATTTGTTTTTCCCTTTTTCTGGA AGTCAGGATCGACTCTACTTTCTCTAGCTCCTTTCAGGAATGTAACACCTCTGATTCTTT ATATTATGTAGTCGCCATACTTTGCAGTAGTTCCCTGTAGACTCTCCCCTAATCCTCAGT CCTTAAGCATCTTGATTACAAAGATGATTCTTTTGGGGTCTAACAGGTTTCCCTGATCGT GGAAGGGACAACAAATTTTAATGGGTCAATAAAATGACAGTTAGCTTGAAAATGCAATTA AAGAACTAGCTAGGGGCCAGGCATGCTAGTCCATGAGTCCCACCACTGAAGTTTCTCCTC CAGTTAGATAAAGCTCACACACAACAGTCAACCTACTTTACTCCAAGGTCACTGATTTTA ATGTTAATCTCTTTGAAAAATACCCTGACTGAAACATCCAAGATGTTTGACCTTATGTTG GGGATGGCCCAACCAAGTGAACCATTACTAATGGGGATTCATACAATAAATGTTGAACAC ATAATATGCATTCAGTTATATAATACCAAGCTCCAATAAAAGAGCTTTAAATAGCCACTG GTTGGGTTTTTTTGGTTTTGTTTTGTTTTGTTTTGTTTTTCAGATATCTACTGGAACTGT TCATATTTTCTTTTTCTGTTTTTGTTGCATTCATTTACAGTGAATTGTACTAATGACGTT TTAATTTTGAAGCAATGTAAAAAGCCATGCAAATTACGTATTATTTATATGGTCATGGCT GAGTTGTTATAGTAATTGATTCAGACATTCACTGTTTTGTTTTTGTTTTTGTTTTTTTGC AAGTTTTACTTCTTCAAAATTTTATGCAGTGTGGTCATTTAATAACTTATGTTGTATTTT TCTTTTTCTTTCTTTCTTTTTTTTTTCTTTGACATGGTCT..........

Sequence Detail Report

Gene Symbol (Gene ID)	Kdelc1 (ENSMUSG00000026047)
Transcript ID	ENSMUST00000065767

		SNP Information
Strain :
Sequence Retrieve :
Exon translate : CDS Start ( 1 ) - End ( 503 ) -
Strand :	forward reverse
Show sequence :	nucleotide amino acid
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