MoG+ -Mouse Genome database with high added value-

Target CDS Information

Gene Symbol (Gene ID)

Gcnt2 (ENSMUSG00000021360)

Cross Reference

CCDS	CCDS26468.1
EMBL	AC133496, AC159205, AY435149, ...show all
GO	GO:0000139, GO:0006486, GO:0007179, ...show all
goslim_goa	GO:0003674, GO:0005575, GO:0005622, ...show all
MGI_trans_name	Gcnt2-202
protein_id	AAB39621.1, AAR95650.1
RefSeq_mRNA	NM_008105.3
RefSeq_peptide	NP_032131
UCSC	uc007qem.2
UniParc	UPI0000021BA8

Uniprot/SWISSPROT

P97402

Definition

protein_id:ENSMUSP00000070942
translation:

MPPSVRYFFIVSVTTVIVFIVLYVLSFGGDQSYQKLNISDSVMLAQVCSSFIDGKSRFLW
RNKLMIHEKPSCTEYVTQSHYITAPLSQEEVDFPLAYVMVIHHNFDTFARLFRAIFMPQN
IYCVHVDEKATAEFKGAVEQLVSCFPNAFLASKMEPVVYGGISRLQADLNCIKDLSTSEV
PWKYAINTCGQDFPLKTNKEIVQYLKGLKGKNLTPGVLPPAHAIGRTRYVHREHLSKELS
YVIRTTALKPPPPHNLTIYFGSAYVALSREFANFVLRDPRAVDLLHWSKDTFSPDEHFWV
TLNRIPGVPGSMPPNASWTGNLRAVKWMDMEAKHGGCHGHYVHGICIYGNGDLQWLINSQ
SLFANKFELNTYPLTVECLELRLRERTLNQSEIAIQPSWYF

Chromosome

Length
Position(start - end)

70,974
40,887,367 - 40,958,342

Orient to Chromosome

plus

Link

Location : (13:40887367-40958342)
/

Detail Map

name	Gcnt2 (ENSMUSG00000021360)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : Gcnt2 note : glucosaminyl (N-acetyl) transferase 2, I-branching enzyme [Source:MGI Symbol;Acc:MGI:1100870]

name	A730081D07Rik (ENSMUSG00000086693)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : A730081D07Rik note : RIKEN cDNA A730081D07 gene [Source:MGI Symbol;Acc:MGI:2441825]

name	Gcnt2 (ENSMUSG00000021360)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000110191

name	Gcnt2 (ENSMUSG00000021360)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000069958

name	Gcnt2 (ENSMUSG00000021360)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000067778

name	Gcnt2 (ENSMUSG00000021360) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS36637.1 RefSeq_peptide:NP_076376 RefSeq_mRNA:NM_023887.4 Uniprot/SPTREMBL:Q6T5E4 UCSC:uc007qel.2 Fantom:F830016L15 EMBL:AC133496 EMBL:AC159205 EMBL:AK156328 EMBL:AY435148 EMBL:BC094572 GO:GO:0006486 GO:GO:0007179 GO:GO:0008109 GO:GO:0008375 GO:GO:0010608 GO:GO:0010718 GO:GO:0010812 GO:GO:0016020 GO:GO:0030335 GO:GO:0034116 GO:GO:0036438 GO:GO:0051897 GO:GO:0070374 MGI_trans_name:Gcnt2-203 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005975 goslim_goa:GO:0006464 goslim_goa:GO:0007165 goslim_goa:GO:0008150 goslim_goa:GO:0009058 goslim_goa:GO:0016757 goslim_goa:GO:0042592 protein_id:AAH94572.1 protein_id:AAR95649.1 protein_id:BAE33677.1 UniParc:UPI00001E7D61
definition	note : transcript_id=ENSMUST00000110191 protein_id : ENSMUSP00000105820 translation : MGSWKYSLFSLSLIAALMLMFMYDRKLWKNYHFPRAVSNISVLAEVCLQMFSGESFYTADSARKTTLENFTCPEYKIQNHYITETLSEEEARFPLAFTLTIHKDYDTFERLFRAIYMPQNVYCVHVDSKATDTFKEEVRQLLSCFPNAFLASRMEPVVYGGFSRLQADLNCMKDLVASKIPWKYVLNTCGQDFPLKTNKEIVQYLKRFIGKNLTPGVLPPAHAVGRTKYVHQELLDHKNPYVHNTARLKAPPPHNLTIYFGTAYVALTREFANFVLKDQRSVDLISWSKDTYSPDEHFWVTLNRIPGVPGSMPPNASWTGNLRAVKWMDMEAKHGGCHGHYVHGICIYGNGDLQWLINSQSLFANKFELNTYPLTVECLELRLRERTLNQSEIAIQPSWYF

name	Gcnt2 (ENSMUSG00000021360) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS26468.1 Uniprot/SWISSPROT:P97402 RefSeq_peptide:NP_032131 RefSeq_mRNA:NM_008105.3 UCSC:uc007qem.2 EMBL:AC133496 EMBL:AC159205 EMBL:AY435149 EMBL:U68182 GO:GO:0000139 GO:GO:0006486 GO:GO:0007179 GO:GO:0007179 GO:GO:0008109 GO:GO:0008109 GO:GO:0008284 GO:GO:0008375 GO:GO:0010608 GO:GO:0010608 GO:GO:0010718 GO:GO:0010718 GO:GO:0010812 GO:GO:0010812 GO:GO:0016021 GO:GO:0030335 GO:GO:0030335 GO:GO:0034116 GO:GO:0034116 GO:GO:0036438 GO:GO:0036438 GO:GO:0051897 GO:GO:0051897 GO:GO:0070374 GO:GO:0070374 MGI_trans_name:Gcnt2-202 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005737 goslim_goa:GO:0005794 goslim_goa:GO:0005975 goslim_goa:GO:0006464 goslim_goa:GO:0007165 goslim_goa:GO:0008150 goslim_goa:GO:0009058 goslim_goa:GO:0016757 goslim_goa:GO:0042592 goslim_goa:GO:0043226 protein_id:AAB39621.1 protein_id:AAR95650.1 UniParc:UPI0000021BA8
definition	note : transcript_id=ENSMUST00000069958 protein_id : ENSMUSP00000070942 translation : MPPSVRYFFIVSVTTVIVFIVLYVLSFGGDQSYQKLNISDSVMLAQVCSSFIDGKSRFLWRNKLMIHEKPSCTEYVTQSHYITAPLSQEEVDFPLAYVMVIHHNFDTFARLFRAIFMPQNIYCVHVDEKATAEFKGAVEQLVSCFPNAFLASKMEPVVYGGISRLQADLNCIKDLSTSEVPWKYAINTCGQDFPLKTNKEIVQYLKGLKGKNLTPGVLPPAHAIGRTRYVHREHLSKELSYVIRTTALKPPPPHNLTIYFGSAYVALSREFANFVLRDPRAVDLLHWSKDTFSPDEHFWVTLNRIPGVPGSMPPNASWTGNLRAVKWMDMEAKHGGCHGHYVHGICIYGNGDLQWLINSQSLFANKFELNTYPLTVECLELRLRERTLNQSEIAIQPSWYF

name	Gcnt2 (ENSMUSG00000021360) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS26469.1 RefSeq_peptide:NP_573482 RefSeq_mRNA:NM_133219.1 Uniprot/SPTREMBL:Q7TPQ8 UCSC:uc007qeo.1 EMBL:AC133496 EMBL:AC159205 EMBL:AY435150 EMBL:BC054845 GO:GO:0006486 GO:GO:0007179 GO:GO:0008109 GO:GO:0008375 GO:GO:0010608 GO:GO:0010718 GO:GO:0010812 GO:GO:0016020 GO:GO:0030335 GO:GO:0034116 GO:GO:0036438 GO:GO:0051897 GO:GO:0070374 MGI_trans_name:Gcnt2-201 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005975 goslim_goa:GO:0006464 goslim_goa:GO:0007165 goslim_goa:GO:0008150 goslim_goa:GO:0009058 goslim_goa:GO:0016757 goslim_goa:GO:0042592 protein_id:AAH54845.1 protein_id:AAR95651.1 UniParc:UPI000018666A
definition	note : transcript_id=ENSMUST00000067778 protein_id : ENSMUSP00000066467 translation : MSLRGKVFAVSALSVVIFVVFYHSQLSLPNLYQQLNSSSERTSVTICDYGLQNHTFFTTGDTSPHPLERLSCPQYRIQSHYITSPLSEEEAAFPLAYIMVIHKDFDTFERLFRAIYMPQNVYCVHVDSKATDTFKEAVRQLLSCFPNAFLASKVEQVVYGGFSRLQADLNCMKDLVASKVPWKYVLNTCGQDFPLKTNKEIINHLKRFKGKNITPGVLPPAYIVVRTKYVHQERKGKDGYFMHKTNILKTPPPHQLIIYFGTAYVALTRDFVNFILNDERAIALLEWSKDTYSPDEHFWVTLNRIPGVPGSMPPNASWTGNLRAVKWMDMEAKHGGCHGHYVHGICIYGNGDLQWLINSQSLFANKFELNTYPLTVECLELRLRERTLNQSEIAIQPSWYF

name
type	STS
link
xref	UniSTS_NUM:116543 UniSTS:D13Mit61
definition	note : map_weight=1 standard_name : D13Mit61

name
type	misc_feature
link
xref
definition	note : contig AC159205.2 1..180255(-1)

name
type	misc_feature
link
xref
definition	note : contig AC133496.3 1..173149(-1)

name	A730081D07Rik (ENSMUSG00000086693)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000097773 Vega_transcript:OTTMUST00000097773 UCSC:uc007qep.1 Clone_based_vega_transcript:RP24-386G2.2-001 MGI_trans_name:A730081D07Rik-001 OTTT:OTTMUST00000097773
definition	note : processed_transcript note : transcript_id=ENSMUST00000153685

Polymorphisms Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Gcnt2 (ENSMUSG00000021360)
Transcript ID	ENSMUST00000069958

Reports
substitution
cSNPs	3
Insertion	63
Deletion	68
SNPs	-1kb 40882089(c.-5278A>G), 40882471(c.-4896A>C), 40882728(c.-4639G>A), 40883108(c.-4259A>G), 40883445(c.-3922A>G), 40883459(c.-3908C>T), 40883522(c.-3845C>T), 40883641(c.-3726T>C), 40883836(c.-3531C>T), 40883951(c.-3416T>C), 40884128(c.-3239A>C), 40884135(c.-3232G>A), 40884179(c.-3188G>A), 40884235(c.-3132T>C), 40884252(c.-3115C>T), 40884300(c.-3067A>G), 40884302(c.-3065A>G), 40884365(c.-3002T>C), 40884602(c.-2765C>T), 40884614(c.-2753C>T), 40884728(c.-2639A>G), 40884741(c.-2626G>C), 40884855(c.-2512T>C), 40884959(c.-2408C>T), 40884975(c.-2392C>T), 40885074(c.-2293G>T), 40885117(c.-2250G>A), 40885194(c.-2173G>T), 40885201(c.-2166G>A), 40885331(c.-2036A>C), 40885372(c.-1995A>G), 40885476(c.-1891G>T), 40885505(c.-1862C>T), 40885518(c.-1849G>C), 40885519(c.-1848A>C), 40885536(c.-1831A>G), 40885650(c.-1717A>G), 40885833(c.-1534A>G), 40886047(c.-1320C>T), 40886301(c.-1066G>A), 40886578(c.-789T>C), 40886598(c.-769C>T), 5'UTR 40886843(c.-524G>C), 40886872(c.-495G>A), 40886883(c.-484T>C), 40886898(c.-469A>G), 40886901(c.-466C>G), 40887209(c.-158T>A), CDS 40888029(c.663C>T), 40888114(c.748C>A), 40888125(c.759C>T), 3'UTR 40958743(c.401G>A), 40958930(c.588C>T), 40958957(c.615G>A), 40959390(c.1048C>G), 40959586(c.1244C>T), 40959698(c.1356T>C), 40959934(c.1592G>A), 40960160(c.1818G>A), 40960314(c.1972T>C), 40960630(c.2288T>G), INTRON 40888432(c.919+147T>C), 40889740(c.919+1455T>C), 40889750(c.919+1465A>C), 40889961(c.919+1676C>T), 40890005(c.919+1720A>T), 40890186(c.919+1901T>C), 40890204(c.919+1919C>A), 40890563(c.919+2278G>A), 40890943(c.919+2658C>T), 40891106(c.919+2821C>T), 40891116(c.919+2831G>A), 40891150(c.919+2865G>A), 40891396(c.919+3111G>T), 40891599(c.919+3314A>G), 40891603(c.919+3318A>G), 40891803(c.919+3518C>T), 40892045(c.919+3760G>A), 40892121(c.919+3836T>G), 40892179(c.919+3894A>G), 40892230(c.919+3945C>T), 40892391(c.919+4106G>T), 40892556(c.919+4271C>T), 40892874(c.919+4589T>C), 40892978(c.919+4693C>G), 40893087(c.919+4802T>C), 40893263(c.919+4978T>G), 40893304(c.919+5019A>G), 40893323(c.919+5038G>A), 40893337(c.919+5052T>C), 40893460(c.919+5175A>G), 40893472(c.919+5187T>G), 40893487(c.919+5202G>A), 40893515(c.919+5230G>T), 40893558(c.919+5273G>T), 40893565(c.919+5280A>G), 40893733(c.919+5448C>A), 40893808(c.919+5523G>T), 40893810(c.919+5525C>T), 40893824(c.919+5539T>C), 40893866(c.919+5581A>T), 40893958(c.919+5673A>G), 40894000(c.919+5715T>C), 40894005(c.919+5720C>A), 40894188(c.919+5903G>A), 40894261(c.919+5976T>C), 40894279(c.919+5994C>T), 40894368(c.919+6083T>C), 40894369(c.919+6084G>A), 40894386(c.919+6101T>C), 40894446(c.919+6161G>A), 40894478(c.919+6193G>A), 40894526(c.919+6241T>A), 40894626(c.919+6341T>C), 40894627(c.919+6342G>T), 40894677(c.919+6392C>T), 40894687(c.919+6402A>G), 40894756(c.919+6471G>A), 40894828(c.919+6543T>A), 40895012(c.919+6727A>G), 40895041(c.919+6756A>G), 40895120(c.919+6835A>G), 40895164(c.919+6879G>A), 40895388(c.919+7103A>G), 40895806(c.919+7521T>C), 40895997(c.919+7712T>C), 40896050(c.919+7765C>T), 40896081(c.919+7796G>A), 40896084(c.919+7799T>G), 40896090(c.919+7805A>G), 40896306(c.919+8021C>G), 40896310(c.919+8025A>G), 40896453(c.919+8168T>C), 40896563(c.919+8278T>G), 40896580(c.919+8295A>G), 40897013(c.919+8728T>C), 40897324(c.919+9039A>G), 40897329(c.919+9044G>A), 40897624(c.919+9339T>C), 40897692(c.919+9407A>T), 40897712(c.919+9427A>G), 40898023(c.919+9738A>G), 40898048(c.919+9763G>A), 40898143(c.919+9858A>G), 40898162(c.919+9877T>G), 40898179(c.919+9894C>T), 40898375(c.919+10090T>C), 40898659(c.919+10374G>A), 40898686(c.919+10401T>C), 40898725(c.919+10440A>G), 40898997(c.919+10712G>A), 40899344(c.919+11059T>C), 40899403(c.919+11118C>T), 40899669(c.919+11384G>A), 40899740(c.919+11455T>C), 40899750(c.919+11465T>C), 40899871(c.919+11586A>G), 40899996(c.919+11711T>C), 40899998(c.919+11713A>G), 40900185(c.919+11900T>G), 40900356(c.919+12071A>G), 40900693(c.919+12408T>C), 40900780(c.919+12495G>A), 40901019(c.919+12734G>A), 40901532(c.919+13247C>T), 40901597(c.919+13312T>C), 40901850(c.919+13565A>C), 40902181(c.919+13896C>T), 40902248(c.919+13963G>A), 40902338(c.919+14053G>A), 40902477(c.919+14192C>T), 40903068(c.919+14783G>C), 40903146(c.919+14861G>T), 40903274(c.919+14989A>G), 40903412(c.919+15127T>C), 40903583(c.919+15298C>T), 40903751(c.919+15466T>C), 40903753(c.919+15468T>G), 40903770(c.919+15485T>C), 40903779(c.919+15494A>G), 40903867(c.919+15582A>G), 40903930(c.919+15645C>G), 40903956(c.919+15671G>T), 40904224(c.919+15939T>C), 40904321(c.919+16036G>C), 40904440(c.919+16155G>T), 40904520(c.919+16235C>T), 40904583(c.919+16298T>C), 40904586(c.919+16301G>C), 40904621(c.919+16336C>G), 40904668(c.919+16383G>A), 40904707(c.919+16422A>G), 40904712(c.919+16427A>C), 40904767(c.919+16482A>G), 40904812(c.919+16527C>T), 40904937(c.919+16652T>C), 40904947(c.919+16662C>T), 40904993(c.919+16708A>C), 40905022(c.919+16737A>G), 40905053(c.919+16768C>T), 40905169(c.919+16884C>T), 40905279(c.919+16994G>A), 40905444(c.919+17159T>C), 40905461(c.919+17176A>C), 40905531(c.919+17246T>C), 40905652(c.919+17367C>T), 40905999(c.919+17714A>G), 40906077(c.919+17792A>G), 40906225(c.919+17940G>C), 40906550(c.919+18265A>G), 40906563(c.919+18278C>G), 40906584(c.919+18299G>A), 40907512(c.919+19227T>G), 40907611(c.919+19326C>T), 40907641(c.919+19356A>G), 40907670(c.919+19385G>A), 40907781(c.919+19496C>T), 40908009(c.919+19724A>G), 40908055(c.919+19770G>T), 40908505(c.919+20220T>C), 40908585(c.919+20300T>A), 40908592(c.919+20307T>C), 40908913(c.919+20628A>G), 40909089(c.919+20804G>A), 40909189(c.919+20904A>G), 40909373(c.919+21088G>A), 40909412(c.919+21127G>C), 40909422(c.919+21137A>G), 40909532(c.919+21247T>C), 40909578(c.919+21293C>T), 40909582(c.919+21297T>C), 40909682(c.919+21397A>G), 40910463(c.919+22178G>T), 40910502(c.919+22217T>A), 40910526(c.919+22241C>T), 40910573(c.919+22288G>A), 40910614(c.919+22329T>C), 40910620(c.919+22335A>G), 40910628(c.919+22343T>C), 40910631(c.919+22346C>T), 40910770(c.919+22485C>T), 40910783(c.919+22498T>C), 40910784(c.919+22499G>A), 40911573(c.919+23288T>C), 40911695(c.919+23410A>G), 40911794(c.919+23509C>T), 40911832(c.919+23547A>G), 40912023(c.919+23738C>T), 40912235(c.919+23950A>G), 40912479(c.919+24194A>G), 40912649(c.919+24364G>A), 40912655(c.919+24370T>G), 40912700(c.919+24415G>A), 40912702(c.919+24417A>G), 40912717(c.919+24432G>A), 40912741(c.919+24456A>T), 40912787(c.919+24502A>G), 40912804(c.919+24519C>T), 40912815(c.919+24530G>A), 40913174(c.919+24889A>G), 40913280(c.919+24995T>C), 40913289(c.919+25004A>G), 40913308(c.919+25023C>T), 40913309(c.919+25024A>G), 40913518(c.919+25233T>C), 40913541(c.919+25256T>C), 40913554(c.919+25269T>C), 40913579(c.919+25294G>C), 40913581(c.919+25296C>T), 40913593(c.919+25308C>G), 40913645(c.919+25360A>G), 40913687(c.919+25402T>G), 40913712(c.919+25427A>C), 40913760(c.919+25475G>A), 40913843(c.919+25558G>T), 40913863(c.919+25578C>T), 40913928(c.919+25643C>T), 40913980(c.919+25695G>C), 40914127(c.919+25842G>A), 40914921(c.919+26636G>A), 40915131(c.919+26846C>G), 40915345(c.919+27060A>G), 40915469(c.919+27184A>G), 40915489(c.919+27204T>C), 40916102(c.919+27817G>A), 40916135(c.919+27850T>C), 40916142(c.919+27857A>G), 40916159(c.919+27874C>T), 40916198(c.919+27913A>C), 40916352(c.919+28067C>T), 40916656(c.919+28371G>A), 40916721(c.919+28436T>C), 40916943(c.919+28658G>A), 40916988(c.919+28703T>G), 40917104(c.919+28819G>C), 40917206(c.919+28921C>A), 40917356(c.919+29071A>G), 40917443(c.919+29158G>A), 40917511(c.919+29226C>T), 40917516(c.919+29231T>C), 40917614(c.919+29329G>C), 40918826(c.919+30541G>A), 40918842(c.919+30557T>C), 40918917(c.919+30632C>T), 40919000(c.919+30715A>G), 40919082(c.919+30797G>A), 40919084(c.919+30799G>A), 40919089(c.919+30804C>G), 40919119(c.919+30834A>G), 40919124(c.919+30839T>C), 40919561(c.919+31276A>G), 40919566(c.919+31281C>T), 40919573(c.919+31288A>C), 40919595(c.919+31310T>C), 40919596(c.919+31311A>G), 40921069(c.920-32507G>A), 40921217(c.920-32359T>C), 40921220(c.920-32356C>G), 40921225(c.920-32351C>T), 40921419(c.920-32157A>C), 40921424(c.920-32152A>G), 40922082(c.920-31494C>T), 40922113(c.920-31463C>T), 40922726(c.920-30850C>T), 40922748(c.920-30828C>G), 40922865(c.920-30711G>A), 40922933(c.920-30643G>A), 40922976(c.920-30600T>C), 40923002(c.920-30574C>T), 40923103(c.920-30473A>T), 40923125(c.920-30451C>T), 40923300(c.920-30276A>G), 40923370(c.920-30206C>T), 40923400(c.920-30176G>A), 40923529(c.920-30047T>C), 40923650(c.920-29926G>C), 40923743(c.920-29833T>C), 40924201(c.920-29375C>T), 40924531(c.920-29045A>G), 40924566(c.920-29010G>A), 40924702(c.920-28874C>G), 40925407(c.920-28169T>C), 40925516(c.920-28060A>C), 40925564(c.920-28012C>T), 40925676(c.920-27900G>A), 40925710(c.920-27866A>C), 40925718(c.920-27858C>A), 40926034(c.920-27542C>T), 40926201(c.920-27375A>G), 40926605(c.920-26971T>C), 40926730(c.920-26846C>T), 40926760(c.920-26816G>A), 40926800(c.920-26776A>G), 40926841(c.920-26735C>A), 40927006(c.920-26570T>A), 40927029(c.920-26547G>A), 40927089(c.920-26487C>T), 40927301(c.920-26275T>C), 40927352(c.920-26224A>G), 40927370(c.920-26206A>G), 40927576(c.920-26000G>A), 40927604(c.920-25972C>T), 40927635(c.920-25941G>A), 40927681(c.920-25895T>G), 40928019(c.920-25557C>T), 40928097(c.920-25479G>C), 40928119(c.920-25457T>C), 40928260(c.920-25316T>G), 40928273(c.920-25303T>C), 40928355(c.920-25221T>C), 40928396(c.920-25180A>G), 40928429(c.920-25147A>G), 40928511(c.920-25065C>A), 40928526(c.920-25050A>G), 40928582(c.920-24994T>C), 40928584(c.920-24992C>T), 40928589(c.920-24987C>A), 40928629(c.920-24947G>A), 40928661(c.920-24915G>C), 40928667(c.920-24909T>C), 40928731(c.920-24845T>C), 40928735(c.920-24841T>C), 40928908(c.920-24668T>C), 40928913(c.920-24663C>G), 40928925(c.920-24651C>T), 40928986(c.920-24590C>T), 40928996(c.920-24580T>C), 40929027(c.920-24549C>T), 40929073(c.920-24503A>G), 40929100(c.920-24476T>C), 40929111(c.920-24465A>G), 40929149(c.920-24427A>G), 40929202(c.920-24374A>G), 40929257(c.920-24319C>T), 40929543(c.920-24033G>A), 40929945(c.920-23631C>T), 40929975(c.920-23601C>T), 40930012(c.920-23564T>C), 40930125(c.920-23451T>C), 40930201(c.920-23375G>T), 40930246(c.920-23330C>T), 40930473(c.920-23103T>C), 40930563(c.920-23013C>G), 40930746(c.920-22830T>C), 40930821(c.920-22755T>A), 40931314(c.920-22262A>G), 40931496(c.920-22080A>G), 40931645(c.920-21931C>T), 40932409(c.920-21167C>T), 40932540(c.920-21036G>C), 40932557(c.920-21019G>T), 40932582(c.920-20994G>A), 40932696(c.920-20880A>G), 40932791(c.920-20785C>T), 40932853(c.920-20723A>G), 40932972(c.920-20604G>A), 40933010(c.920-20566C>T), 40933085(c.920-20491T>C), 40933124(c.920-20452A>G), 40933313(c.920-20263T>C), 40933333(c.920-20243A>C), 40933336(c.920-20240T>C), 40933337(c.920-20239A>G), 40933378(c.920-20198T>C), 40933887(c.920-19689C>T), 40933996(c.920-19580A>G), 40933999(c.920-19577G>A), 40934423(c.920-19153C>T), 40934434(c.920-19142T>C), 40934514(c.920-19062C>T), 40934532(c.920-19044A>G), 40934575(c.920-19001C>A), 40934589(c.920-18987T>C), 40934747(c.920-18829C>T), 40935057(c.920-18519G>A), 40935152(c.920-18424G>T), 40935263(c.920-18313G>T), 40935283(c.920-18293A>T), 40935284(c.920-18292A>G), 40935291(c.920-18285A>G), 40935348(c.920-18228T>C), 40935389(c.920-18187C>T), 40935522(c.920-18054G>A), 40935596(c.920-17980G>A), 40935603(c.920-17973C>T), 40935667(c.920-17909A>T), 40935668(c.920-17908T>C), 40935695(c.920-17881T>C), 40935696(c.920-17880G>A), 40935732(c.920-17844A>C), 40935747(c.920-17829T>C), 40936119(c.920-17457A>G), 40936198(c.920-17378T>C), 40936596(c.920-16980T>G), 40936597(c.920-16979T>G), 40936627(c.920-16949C>T), 40936997(c.920-16579A>T), 40937142(c.920-16434T>C), 40937166(c.920-16410T>C), 40937189(c.920-16387T>C), 40937209(c.920-16367A>G), 40937264(c.920-16312G>A), 40937318(c.920-16258T>A), 40937389(c.920-16187T>C), 40937444(c.920-16132C>T), 40937477(c.920-16099C>T), 40937491(c.920-16085C>T), 40937609(c.920-15967G>A), 40937611(c.920-15965C>T), 40937696(c.920-15880T>C), 40937782(c.920-15794C>T), 40937783(c.920-15793C>G), 40937854(c.920-15722A>G), 40937949(c.920-15627C>T), 40937954(c.920-15622G>A), 40937991(c.920-15585G>A), 40938041(c.920-15535T>C), 40938284(c.920-15292G>C), 40938285(c.920-15291T>C), 40938316(c.920-15260T>C), 40938323(c.920-15253A>G), 40938352(c.920-15224G>C), 40938391(c.920-15185A>G), 40938392(c.920-15184A>G), 40938400(c.920-15176T>C), 40938428(c.920-15148T>C), 40938472(c.920-15104C>T), 40938561(c.920-15015T>G), 40938768(c.920-14808G>A), 40938775(c.920-14801C>G), 40938813(c.920-14763G>A), 40938830(c.920-14746G>A), 40938926(c.920-14650A>G), 40938950(c.920-14626T>C), 40938987(c.920-14589G>A), 40939006(c.920-14570T>C), 40939025(c.920-14551T>C), 40939077(c.920-14499T>A), 40939236(c.920-14340C>T), 40939239(c.920-14337A>T), 40939247(c.920-14329A>G), 40939249(c.920-14327G>A), 40939262(c.920-14314A>G), 40939432(c.920-14144A>T), 40939725(c.920-13851C>G), 40939760(c.920-13816A>C), 40939766(c.920-13810A>G), 40940060(c.920-13516C>T), 40940119(c.920-13457A>G), 40940163(c.920-13413C>T), 40940182(c.920-13394G>A), 40940282(c.920-13294A>C), 40940310(c.920-13266G>A), 40940346(c.920-13230C>T), 40940351(c.920-13225T>G), 40940403(c.920-13173G>A), 40940437(c.920-13139A>G), 40940551(c.920-13025G>T), 40940589(c.920-12987G>C), 40940965(c.920-12611C>G), 40940988(c.920-12588C>T), 40941096(c.920-12480C>T), 40941133(c.920-12443A>G), 40941369(c.920-12207A>G), 40941388(c.920-12188A>T), 40941628(c.920-11948T>C), 40941718(c.920-11858G>T), 40941990(c.920-11586C>T), 40942445(c.920-11131G>C), 40942576(c.920-11000T>A), 40942603(c.920-10973A>G), 40942698(c.920-10878G>T), 40943450(c.920-10126A>T), 40943498(c.920-10078C>A), 40943675(c.920-9901C>T), 40943775(c.920-9801C>T), 40944059(c.920-9517G>T), 40944126(c.920-9450C>T), 40944514(c.920-9062G>A), 40944573(c.920-9003G>A), 40944670(c.920-8906G>C), 40944782(c.920-8794T>C), 40944864(c.920-8712C>G), 40945017(c.920-8559T>A), 40945035(c.920-8541T>C), 40945148(c.920-8428T>G), 40945211(c.920-8365G>A), 40945214(c.920-8362T>A), 40945264(c.920-8312C>T), 40945326(c.920-8250A>T), 40945554(c.920-8022G>C), 40945731(c.920-7845A>G), 40945766(c.920-7810C>T), 40946163(c.920-7413G>A), 40946915(c.920-6661G>A), 40946946(c.920-6630G>C), 40946951(c.920-6625C>T), 40947543(c.920-6033A>G), 40947547(c.920-6029A>G), 40947784(c.920-5792T>C), 40947894(c.920-5682C>T), 40948143(c.920-5433G>T), 40948186(c.920-5390C>G), 40948315(c.920-5261G>A), 40948427(c.920-5149A>G), 40948909(c.920-4667C>T), 40949560(c.920-4016T>C), 40949667(c.920-3909A>G), 40949677(c.920-3899C>T), 40949735(c.920-3841C>T), 40949790(c.920-3786G>A), 40950261(c.920-3315G>A), 40950365(c.920-3211C>T), 40950628(c.920-2948G>A), 40950900(c.920-2676A>G), 40951023(c.920-2553C>T), 40951170(c.920-2406A>T), 40951974(c.920-1602C>G), 40952058(c.920-1518G>A), 40952221(c.920-1355C>T), 40952415(c.920-1161A>C), 40952459(c.920-1117C>T), 40952547(c.920-1029C>T), 40952682(c.920-894T>G), 40952740(c.920-836T>C), 40952773(c.920-803C>G), 40952785(c.920-791G>A), 40952812(c.920-764A>G), 40952849(c.920-727A>G), 40953013(c.920-563C>A), 40953108(c.920-468A>G), 40953137(c.920-439T>C), 40953140(c.920-436C>A), 40953341(c.920-235G>A), 40953391(c.920-185A>T), 40953444(c.920-132A>G), 40953450(c.920-126A>G), 40953476(c.920-100A>G), 40954379(c.1015+708T>C), 40954542(c.1015+871T>C), 40954554(c.1015+883T>G), 40954597(c.1015+926C>A), 40954606(c.1015+935C>T), 40954665(c.1015+994G>A), 40954805(c.1015+1134C>T), 40954825(c.1015+1154A>G), 40954928(c.1015+1257G>A), 40955054(c.1015+1383C>T), 40955161(c.1015+1490T>C), 40955162(c.1015+1491G>A), 40955292(c.1015+1621T>C), 40955307(c.1015+1636T>A), 40955308(c.1015+1637T>G), 40955328(c.1015+1657C>T), 40955376(c.1015+1705G>A), 40955437(c.1015+1766T>C), 40955439(c.1015+1768A>C), 40955759(c.1015+2088T>A), 40955765(c.1015+2094C>T), 40955766(c.1015+2095A>G), 40955816(c.1015+2145A>G), 40955859(c.1015+2188T>C), 40955930(c.1016-2222A>G), 40956129(c.1016-2023A>G), 40956324(c.1016-1828T>C), 40956344(c.1016-1808T>C), 40956381(c.1016-1771G>A), 40956518(c.1016-1634G>A), 40956601(c.1016-1551G>A), 40956611(c.1016-1541A>G), 40956613(c.1016-1539T>C), 40956630(c.1016-1522G>A), 40956635(c.1016-1517G>T), 40956751(c.1016-1401C>T), 40956784(c.1016-1368C>T), 40957256(c.1016-896T>G), 40957410(c.1016-742C>T), 40957444(c.1016-708C>T), 40957460(c.1016-692A>C), 40957521(c.1016-631C>T), 40957624(c.1016-528G>A), 40957697(c.1016-455G>T), 40957852(c.1016-300C>T), 40957917(c.1016-235A>G), +1kb 40960918(c.2576C>A), 40960977(c.2635C>T), 40960978(c.2636A>G), 40961174(c.2832G>T), 40965276(c.6934G>A), 40965312(c.6970G>A), 40965327(c.6985G>A), 40965397(c.7055G>T), 40965444(c.7102A>T), 40965538(c.7196A>G), 40965737(c.*7395C>G),
Insertions	-1kb 40881820 (c.-5547_-5546insCA), 40881829 (c.-5538_-5537insC), 40881831 (c.-5536_-5535insC), 40882743 (c.-4624_-4623insT), 40882976 (c.-4391_-4390insG), 40883884 (c.-3483_-3482insGG), 40884323 (c.-3044dupT), 40885757 (c.-1610_-1609insA), 40886102 (c.-1265_-1264insCT), 40886647 (c.-720_-719insTT), 5'UTR CDS 3'UTR 40960202 (c.1854_1860dupAGGTGAG), 40960328 (c.1985_1988dupCCCC), 40960417 (c.2079_2081dupAAA), INTRON 40888402 (c.919+121_919+122insCAAAC), 40892003 (c.919+3718_919+3719insC), 40893383 (c.919+5098dupA), 40893959 (c.919+5677_919+5678dupTC), 40896881 (c.919+8599dupG), 40897495 (c.919+9213dupG), 40899091 (c.919+10806_919+10807insGGTTT), 40899213 (c.919+10932dupC), 40901057 (c.919+12769_919+12772dupTTTT), 40903334 (c.919+15050_919+15051insAAGT), 40906074 (c.919+17789dupT), 40906191 (c.919+17907_919+17908dupGG), 40907035 (c.919+18751_919+18753dupGAA), 40908771 (c.919+20486dupT), 40908782 (c.919+20495_919+20497dupGGT), 40910377 (c.919+22095dupT), 40910380 (c.919+22095dupT), 40910479 (c.919+22193_919+22194dupTT), 40911109 (c.919+22827dupT), 40913044 (c.919+24759_919+24760insGCCC), 40913164 (c.919+24882_919+24883insATGT), 40914234 (c.919+25946_919+25949dupAAAA), 40914837 (c.919+26560dupC), 40915958 (c.919+27670_919+27673dupAGAG), 40917110 (c.919+28826_919+28827insAA), 40922025 (c.920-31547_920-31543dupTCCCC), 40923278 (c.920-30293_920-30292dupCT), 40926495 (c.920-27081_920-27079dupTTT), 40928866 (c.920-24710dupT), 40931944 (c.920-21629_920-21628insTCCT), 40932631 (c.920-20943dupG), 40933172 (c.920-20404_920-20403insATTTT), 40934773 (c.920-18802dupA), 40935173 (c.920-18402dupA), 40936493 (c.920-17079_920-17077dupAAG), 40937312 (c.920-16262_920-16260dupTGT), 40937680 (c.920-15895_920-15892dupTATG), 40941350 (c.920-12229_920-12226dupTTTT), 40942189 (c.920-11387dupA), 40942304 (c.920-11272_920-11271insGG), 40942477 (c.920-11094_920-11093insAGTGGTGTG), 40942824 (c.920-10745dupT), 40945567 (c.920-8008_920-8007insTGGGG), 40952364 (c.920-1207dupC), 40953133 (c.920-443dupA), 40953137 (c.920-439_920-438insAA), 40953281 (c.920-295_920-294insT), 40954574 (c.1015+904_1015+905insGC), 40955593 (c.1015+1922_1015+1923insTTA), 40955611 (c.1015+1940_1015+1941insA), +1kb
Deletions	-1kb 40882260 (c.-5106_-5101delAAAAAA), 40883919 (c.-3447_-3440delTTTTGCTA), 40884374 (c.-2992_-2986delCCCCTCG), 5'UTR CDS 3'UTR 40960266 (c.1925_1926delAG), INTRON 40889540 (c.919+1256delA), 40889578 (c.919+1297_919+1298delCA), 40889581 (c.919+1297_919+1298delCA), 40889904 (c.919+1620_919+1626delAGACTCT), 40890161 (c.919+1889delA), 40893192 (c.919+4912delA), 40893755 (c.919+5471_919+5478delGGAGGCTG), 40893769 (c.919+5493_919+5496delTTTT), 40900584 (c.919+12300delC), 40900792 (c.919+12508delC), 40900897 (c.919+12616_919+12624delTGCTCTAAC), 40905165 (c.919+16885delC), 40905844 (c.919+17566delT), 40907184 (c.919+18910_919+18913delAAAA), 40907568 (c.919+19288_919+19290delTGT), 40908212 (c.919+19934_919+19939delCCTTTG), 40908372 (c.919+20094delA), 40908823 (c.919+20541_919+20543delTTT), 40909383 (c.919+21099_919+21100delGG), 40909451 (c.919+21173delA), 40909457 (c.919+21173delA), 40910160 (c.919+21876delT), 40910222 (c.919+21938delA), 40910797 (c.919+22514delA), 40911056 (c.919+22786_919+22788delTTG), 40911070 (c.919+22786_919+22788delTTG), 40911563 (c.919+23281delT), 40912492 (c.919+24209_919+24210delAT), 40914631 (c.919+26348_919+26350delATT), 40916060 (c.919+27779delG), 40917225 (c.919+28941_919+28942delGC), 40919280 (c.919+31008_919+31009delAA), 40919576 (c.919+31300_919+31301delGG), 40921158 (c.920-32416_920-32415delAT), 40922668 (c.920-30905delG), 40926399 (c.920-27176delA), 40926554 (c.920-27021_920-27017delACAAC), 40927992 (c.920-25583delT), 40928011 (c.920-25564_920-25561delAGAG), 40928866 (c.920-24709_920-24705delGTTTT), 40928880 (c.920-24688_920-24684delGTTTT), 40930318 (c.920-23235_920-23233delGTT), 40933692 (c.920-19874delA), 40934089 (c.920-19485delC), 40936615 (c.920-16960_920-16959delTT), 40938626 (c.920-14949_920-14948delCA), 40939036 (c.920-14539_920-14536delACAG), 40939092 (c.920-14483_920-14482delTT), 40941230 (c.920-12345_920-12340delATCTAA), 40941452 (c.920-12123_920-12122delAA), 40941596 (c.920-11977delC), 40943696 (c.920-9875delA), 40944087 (c.920-9486_920-9484delCGA), 40946117 (c.920-7457delG), 40946550 (c.920-7022_920-7015delTTTGGTTG), 40947126 (c.920-6447delT), 40948570 (c.920-5003_920-4992delGGGGGAGGGACG), 40948793 (c.920-4767_920-4760delAACACACA), 40949045 (c.920-4514_920-4513delTG), 40951249 (c.920-2306_920-2303delGTTT), 40956976 (c.1016-1172delT), +1kb 40961107 (c.2766delT), 40965351 (c.7010_7013delAGAG), 40965516 (c.7175delG),
coding sequence substitutions
premature termination by the nucleotide substitution	0
synonymous num	2
non-synonymous num	1
synonymous substitutions	40888029 (p.Ala221Ala), 40888125 (p.Pro253Pro),
non-synonymous substitutions	40888114 (p.Pro250Thr),
B6 transcript (ENSMUST00000069958)	MPPSVRYFFIVSVTTVIVFIVLYVLSFGGDQSYQKLNISDSVMLAQVCSSFIDGKSRFLW RNKLMIHEKPSCTEYVTQSHYITAPLSQEEVDFPLAYVMVIHHNFDTFARLFRAIFMPQN IYCVHVDEKATAEFKGAVEQLVSCFPNAFLASKMEPVVYGGISRLQADLNCIKDLSTSEV PWKYAINTCGQDFPLKTNKEIVQYLKGLKGKNLTPGVLPPAHAIGRTRYVHREHLSKELS YVIRTTALKPPPPHNLTIYFGSAYVALSREFANFVLRDPRAVDLLHWSKDTFSPDEHFWV TLNRIPGVPGSMPPNASWTGNLRAVKWMDMEAKHGGCHGHYVHGICIYGNGDLQWLINSQ SLFANKFELNTYPLTVECLELRLRERTLNQSEIAIQPSWYF*
MSMv4 transcript	MPPSVRYFFIVSVTTVIVFIVLYVLSFGGDQSYQKLNISDSVMLAQVCSSFIDGKSRFLW RNKLMIHEKPSCTEYVTQSHYITAPLSQEEVDFPLAYVMVIHHNFDTFARLFRAIFMPQN IYCVHVDEKATAEFKGAVEQLVSCFPNAFLASKMEPVVYGGISRLQADLNCIKDLSTSEV PWKYAINTCGQDFPLKTNKEIVQYLKGLKGKNLTPGVLPPAHAIGRTRYVHREHLSKELS YVIRTTALKTPPPHNLTIYFGSAYVALSREFANFVLRDPRAVDLLHWSKDTFSPDEHFWV TLNRIPGVPGSMPPNASWTGNLRAVKWMDMEAKHGGCHGHYVHGICIYGNGDLQWLINSQ SLFANKFELNTYPLTVECLELRLRERTLNQSEIAIQPSWYF*
homology	99.75 (402 / 402)

Exon Detail Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Gcnt2 (ENSMUSG00000021360)
Transcript ID	ENSMUST00000069958

No.	Exon / Intron	Start	End	Start Phase	End Phase	Length	Sequence
	5' upstream sequence						..........AAAAAAAAAAAGATGAAGACAGAGATAGAACTGTCCTTTGCCCTACACCA AAGAAGATAACTTGAAGGAGAGTGAGCCACTTTACAAAATGGCTGCATTTTCTTTCACAA CTGACCTAAAGGCCCAGGGGAGGGTTTCTCAGAATATTTGTTTGATGCAGGTGCAGGAAG AGGATTAGTAAGAGGAAAGAAAAATAATATATAAACAGGAAAAACAAAACATGTAAATAA AATCTGGACGAATGAAACTGTAGCTCAGGACATGGCATGCCATTGGGCTGGAGTCTGGGT GCTTGGAATCTCAAGTTCCTACTTGGAAGGACTCTGCATGCTGTGCTAGTCTAGACTGCA GAAGGAAGACTGGGCACCGAAGGGCACTCTTTCTTCACAGGCTGGAATGCAAACTCATTT CCCATTGCAAGTCAACCCACAAGGTACAGACTCTCACTTGAGAAATGCAGACAACTAGCA AAGGAAAATGGAAAGGCAGCCCCCAGTCCAAAGGACACTGCTTAAAACTGCATCTAAATG TAGGTGGTGGAAAACTGGGTTGTGAGTGTGTAGATCCTGAAAACCCAGCTCTTGGGAGGT AGGGGCTGGAGGATAGTTCCAGGTCAGAATGGATTGCCTGAGACCCTGTTTTGTTTTGTT TTGTTTCGACTATAAAGTCAAGAGTATAGGAGAGCTCCCGAGTGGTCTCTGGGTGCTTAA ACCCTTAAGGTTCTTGGTTGAGATGTAGATCTGAACGTCCTTCGCGGCCAGGATTCAACT CTTTTCTGTGAAGTCTTCAGGTCTCATCCAAATTAGACCGTACAGTTCACCACCTGTACA TTCTGTAACATCAGGGCAGAGGCCAGAGTACGAGGAGAGGGGGGTTTAAGTCAAAGTCAC TCCCCCCCCATCCCCCCCACCTCTGCCCGGTCAGATCCCTTAGGACCGGAACTCCTCCTC CTGGGAGCTCATGTTTTGGAAACTGGTGGGGTGGGGCCAGAAAACATTAC
1	EXON 1	40,886,758	40,888,285	-	1	1,528	AATGGAGCTGGGATGGAGGAGGTGTGCTTTTATTTCAGATTGTGTCATTCGAGTAGAGTC TCCCGAAACAGCCACTAACAGAACCCAGGCTCTTTTAGATCCCCTGGGTTGTTAACCTGG CACACCGGGGAGAGTAGGTAGCAGAGCAGAAGAGAGAGGCAGTGGAGGAAGGCAGGAAAC CCTTCACACGCCTAGCCCGGCTCATCCCATCCACTTTGGGGTTTGCCGTGCCGATTGTAA CAAGAGGAAAGAGCTAGCAGAAACCCCCGAAGGAAAGGAACGAAAGGGGAGGTGAGAAAC TCAATTGAAAAAGAGGTAGCAGGGAGAGTAAAAGTCAGCAGATGCAAACTGGGAGGCCAG AGGAGGAGGAAAAGGCTGGGCTTCGGCAACCTGCTGCTAGGATTTAGACAAAGGAGGTTT GAGAGAGGCGGGATCAGATTCTAATATCTGCACCAGGAGAGAGCTCGCTGCTGGGCTCCG GGAGACAAAACAGCCGCAATTCACACTGACTGGAGCATGTACCACAGCGAGAGCTCCCAG GAAAAAGTAAGTCCGAGAAGGGATTGGCCAAGCTTGACGGACTCTGACATCGGAGACCCT CTTTGAGGCATGCCTCCGTCCGTGCGTTACTTCTTCATAGTGTCTGTGACTACTGTCATC GTTTTTATTGTGCTCTACGTGTTAAGTTTTGGAGGAGATCAAAGCTACCAGAAGCTGAAC ATCTCAGACTCGGTGATGCTGGCTCAAGTGTGCTCATCTTTCATCGACGGGAAAAGCCGG TTCCTGTGGAGAAACAAACTAATGATTCACGAGAAGCCTTCTTGCACAGAATATGTGACC CAAAGCCACTATATCACTGCCCCTTTATCTCAGGAAGAGGTCGATTTTCCTTTGGCGTAT GTCATGGTCATCCATCACAATTTTGACACCTTTGCAAGGCTCTTCAGGGCAATCTTCATG CCTCAAAATATCTACTGTGTTCACGTGGATGAAAAGGCAACAGCTGAATTCAAAGGTGCC GTGGAACAGTTAGTGAGCTGCTTCCCCAATGCCTTTCTGGCTTCTAAGATGGAGCCGGTG GTCTATGGTGGAATCTCCCGGCTCCAGGCTGACCTGAACTGCATCAAAGACCTGTCCACC TCCGAGGTCCCCTGGAAGTACGCCATCAACACCTGTGGACAAGACTTCCCCCTGAAAACC AACAAGGAGATAGTTCAGTACCTGAAAGGGCTTAAGGGGAAGAACCTCACTCCCGGGGTG CTGCCTCCAGCTCACGCCATTGGAAGGACCAGGTACGTCCACCGGGAACACCTAAGCAAA GAGCTTTCCTACGTGATCAGAACCACGGCTCTGAAGACCCCACCTCCTCACAACCTCACC ATTTATTTTGGCTCTGCCTATGTCGCCCTGTCGAGAGAGTTTGCTAACTTTGTTCTCCGT GACCCACGGGCGGTTGATTTGCTCCATTGGTCCAAAGATACTTTCAGTCCCGATGAGCAT TTCTGGGTGACGCTCAATAGGATTCCAG
	INTRON 1 - 2	40,888,286	40,953,575			65,290	GTATGTGAGAGTTCATGGTTCATGC..........TAGTGCAATGTCGTCATCGTTACAG
2	EXON 2	40,953,576	40,953,671	1	1	96	GAGTCCCTGGCTCCATGCCACCAAACGCATCCTGGACGGGTAACCTCAGAGCTGTGAAGT GGATGGACATGGAAGCGAAGCATGGAGGCTGCCATG
	INTRON 2 - 3	40,953,672	40,958,151			4,480	GTAAGGTCTCCCGCTCTGGGGCCAC..........TGTGCCTCTGCTCTTTCCCCCACAG
3	EXON 3	40,958,152	40,960,891	1	-	2,740	GTCACTACGTCCATGGCATTTGTATCTATGGAAACGGAGACTTGCAGTGGCTGATTAATT CGCAAAGCCTGTTTGCTAACAAATTTGAACTCAACACATACCCTCTTACCGTGGAATGCC TGGAACTGAGGCTTCGAGAAAGAACACTCAACCAGAGTGAGATCGCCATACAGCCGAGCT GGTATTTCTGACCCGCAGCAGCTCGGGCCTAAATGGAAATTGAAGACGTAAAGAAGAGCT TTCTTTTCCAAGAGACTCTGGTCTTGGCTATGCTGAAGACTTTTTTAAAAAATGGTTTTC AGGGAACCGTGAGGATCTGGCAACATGGCTCTGCTTGCAATATCCACTGAGCACTGTAAT ACATTTGACAGGATGGCTGCATGAAACTGTCCAGCATTTTTCTGTCGTTTCCCCCCCACC CCAAATCCTTTTTTTCTCTTCTTTTTTAAAAGATAGGTAGGGTCTTGCTAGATATCTCTA GCAAGCCTGTTTCTTGTCAGGTAGCCCAGGATGGCCTTGAACTCTTAATCCTCCGCCTTG GCCCTCTAAGGGCTGCTAGTCCGAGTGTGGACAACCACACCTGGCTCTGGCATCTGGCGG TCACTTGACGCTCATCTGCGTCTCCGTCTGCTAGGTGGTCGGTGATAAATTCAAATGTAT CAGATCTCTGTGCCAGATACTCATATTAGTATACCCTGTTCAAAGGAGAATGGTGGATAA TACTGTCTGAGGAAATCAGAACTTATTTGAGAAGGAAGCTCTCGTTCCACATTCCTAGTA ACTATATTCTCAGGCACACATAGGCACACAGAGACAGCTTCCTAGTAACTCACATCAATT TCGTTTAATACAAACTGATCCTGAAGAGCTGAGGAACTATGTAAGTTCAGTGTCCAAGCA TTTGACTGACATTTGTGCAGAGTTAGGTTCCATCTCCAGCATCACGCACGGGTCTTGTGA ACACCGACATCTTCAGTTTACTTGTGTCTGCAGTTCTGTGGACAGAACAAAGCCATTCAC AAGTGACCGACAGCACGTGCCGTGAGACGGGAGGTGGCTGCAGGAAGAGGATGCCTCAGG GATGCCGGACATTTCCGTGTTCTATTCCAGAGTGTTCTCTTCTCCCAGAGAACACTGGAA CGTCCTCACAGGGATGAAGGAATTCTTTCTTTCCCACAGGAAAGGTGCTACTGTGTGGGT CTGGAACCTGTGAATGAATCACTCCTGGGGTTTCGTTTGTATGTGAGAGACGGGGACCCG GTTCTGTTGTGTGCAGCTTTAGCGGCATCAGGACAGCTTCCAGCTTGCAATGATTGCTGC TGACAGGAACACCTGGATCTCAAGAGCTTTTTATGACAGGTGGACATCTGTGTCATTTTT CCTTGTTCCCTCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATTCATTC GTCAGCCTACATTCAACAAACGCCTCTTGAATGTCTATGATTCCCCCAGACACATGCTGA CAGACACGAGGGAAGCAAGACAGATTCTTTCTCCACTGTTAAACTCCGGGGAGTGGTATC AGCTTTTGAAACCCTGCTCTAGACTCTTACAAAATGGCTACACTTAGCACATACTCTGCC CTGGCTATATATTATATTGGGCCATAGAGATCAGCAATGTATCAATTAATAGATTAATCC AGAGACAGGAAGGAGGAAACGAAAGCTAGAGCCTCTTTGTGACTCCACCAACTCCTTCTT GTCTCCTTTTATTGAAGAGTCCGCACACATACTCACCCCTCTAGTGGGCCACATGAGGAC CTGCATCTTGCAGATGATGTAGCAAGCCTTAGGATGGTTCATGATCAGTAGGAAGCAAAT TCTAAGACCTCAGGGTGTCTTTCTGAGTCTCTCATTTCTTTAGGGATGTGGAGAGAAGAT GAAGTATAGCCGTGTGTAGTGTCGCCAGAGAAGGTGGAGTTTAAGAATGGTCTCAGTGTT ATTAATGAGAAAAAGTTCTGTCATTCAGAAAAAAAAAGCAAAAAACGTGAGGTTGGGACT CAGTAGGTGAGGGTGCTTGCAGCCAAACCTGATGACCTGCATTCAATTCCTGGGTCCCAC GGGACAGAGGGAGAGAGTCCACTACTGAAAGGAACGCTCAAACCTCCTCACACAGGTCCT TGCGCCTGGGCACTCCCCCGCCCCATATGCATACACACATACATGCTTTTGTGATTTTTT TTATTAGTGCTTTTACATTTAGAAATATTTATTTATTCTAGCAGGGAAAAAACCCCACAT GCTTTAAATGATGTCACTTTCCACAACTTCATTCTTGTGCTGTCATTGGACTGAATGTTA TGCATCTTTAAAGGGAATCACTTCGTGTAAAACTCTCTTGTCTCTTCTGCTGAAAAGTAA AATGGGTTGTGTCGGGTAATAAAGGGTCGAGGGGTAGGAAGCACTTGGTCAAGGCGAAGT CTAAAACCGGTCTCTTTTGTATTTGTTACTTGGATGAGAGCACCTGAAGACTAATGTTTT ACACTGGATTGAGATCTCATGGAAAATGAAACATTCTTTTTCTGGAGAAGTTTACATGCC CATTGTTGGTCACCTCTTTACTGTAAATACTATTGAAAAAAGGAGCGTAGCATTTGCATA GCAGGGATTGTGCCTGTATCTACTGTGTCCATTTTGTTTTTTCGGATGTTTTCTGGTTTT GTTTCCTTGGAAATAAATTAATATATTGTTTTCCACCTTC
	3' upstream sequence						AGGAATAGTGGATATTTATTTGATACATGGTTAATATGCACTGGGTCCCCCAGCTTTTGA AAAGGACAAAAGAAACACATTTATATGTGTATAGCTGTCTTAAAATTATCTCTCCACTAA AAAACATAATTGACCTTTCCATTTGTGGACTAAGGGACACTTTGCACTGCACTTGGGCCA TCTTCAGGTGAACACAGAGACTGGCTGGGCATTGGGTTTGCTTTCATCATTTTAGTTTCT AGTCTTGGTAAAATTCCAGTCAGCCACAGACTTCTTGCAGCATAGCTGGCCCTAGAGCTT GGGCAGGGAAGACCCAAAATGAGACTGGAACGTACTGTTATAATGTGTGGTACAAGAATC CCAAAAGGGTGACAATCGTGTCACAGGTTCAGGGGTTGCCTTGAACTCTCCTACTGCATC AGAAATAGGACAATAATAAATTGTGGCCCAATAACTAAAATAAGAATCCAAGCATGCACA ATACATGCATATACATATATGTAAATGCATGTATAAAATATACACATTATTAAAATGTAT AAGAGGCAAGAATTAGCTTGAAGGGAGTTCCTGCTCTTGGGTCCAGTGATCACCCAACAA ATCTATCATGATTCTCTCACCCAGGGCTGAGCACACTGATTCTGTGATGGGTGAGAGAGT AAATATCTGGGGCTTTGTCAGTCACATGGTTTCTGTCGCGATTATTCACTTCTGCTGTGA ATACATAGATGATATATAAGCATGGGCTGTGTGTTCTTTGCCGTGGTTGCAGACTATAAG TTCCTGATCTACCCAATCCCTCTCTAATGCATGTCAGACCCAAAGAAGGCAAAGGACCAT CCTCTTGGATGTGGATTACCTCCTGATGGGAACACTTGAGTGCCCAACACCTCCCCCACC CCAGTCCCCAGCCAGGAGGGGAGAGTGAGAAACGAGCACACAGAAGGAAGACCGGTGGCA TTTCTACTTTGGCTAAGTCTCTGTCTAAGGCACGAGTAAA..........

Sequence Detail Report

Gene Symbol (Gene ID)	Gcnt2 (ENSMUSG00000021360)
Transcript ID	ENSMUST00000069958

		SNP Information
Strain :
Sequence Retrieve :
Exon translate : CDS Start ( 1 ) - End ( 402 ) -
Strand :	forward reverse
Show sequence :	nucleotide amino acid
Color information