MoG+ -Mouse Genome database with high added value-

Target CDS Information

Gene Symbol (Gene ID)

Nck2 (ENSMUSG00000066877)

Cross Reference

CCDS	CCDS14924.1
EMBL	AC107865, AC108914, AF043260, ...show all
GO	GO:0001771, GO:0001771, GO:0005783, ...show all
goslim_goa	GO:0002376, GO:0003674, GO:0005575, ...show all
MGI_trans_name	Nck2-001
OTTP	OTTMUSP00000023150
OTTT	OTTMUST00000049828
protein_id	AAC06353.1, AAH11071.1, AAH34255.1, ...show all
Reactome	R-MMU-1266738, R-MMU-1500931, R-MMU-162582, ...show all
RefSeq_mRNA	NM_010879.3

RefSeq_mRNA_predicted	XM_006495772
RefSeq_peptide	NP_035009
RefSeq_peptide_predicted	XP_006495835.1
UCSC	uc007avo.2
UniParc	UPI00000227AF
Uniprot/SWISSPROT	O55033
Vega_transcript	Nck2-001, OTTMUST00000049828
Vega_translation	179153, OTTMUSP00000023150

Definition

protein_id:ENSMUSP00000083611
translation:

MTEEVIVIAKWDYTAQQDQELDIRKNERLWLLDDSKTWWRVRNAANRTGYVPSNYVERKN
SLKKGSLVKNLKDTLGLGKTRRKPSARDASPTPSTDAEYPANGSGADRIYDLNIPAFVKF
AYVAEREDELSLVKGSRVTVMEKCSDGWWRGSFNGQIGWFPSNYVLEEADEAAAEAPSFL
SLRRGTALSNGQGARVLHVVQTLYPFSSVTEEELSFEKGETMEVIEKPENDPEWWKCKNA
RGQVGLVPKNYVVVLSDGPALHPAHTPQISYTGPSASGRFAGREWYYGNVTRHQAECALN
ERGVEGDFLIRDSESSPSDFSVSLKASGRNKHFKVQLVDSVYCIGQRRFHSMDELVEHYK
KAPIFTSEHGEKLYLVRALQ

Chromosome

Length
Position(start - end)

35,773
43,533,568 - 43,569,342

Orient to Chromosome

plus

Link

Location : (1:43533568-43569342)
/

Detail Map

name	Nck2 (ENSMUSG00000066877)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : Nck2 note : non-catalytic region of tyrosine kinase adaptor protein 2 [Source:MGI Symbol;Acc:MGI:1306821]

name	Gm37536 (ENSMUSG00000103422)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : Gm37536 note : predicted gene, 37536 [Source:MGI Symbol;Acc:MGI:5610764]

name	Gm38228 (ENSMUSG00000103945)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : Gm38228 note : predicted gene, 38228 [Source:MGI Symbol;Acc:MGI:5611456]

name	Nck2 (ENSMUSG00000066877)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000187435

name	Nck2 (ENSMUSG00000066877)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000086421

name	Nck2 (ENSMUSG00000066877)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000202540

name	Nck2 (ENSMUSG00000066877)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000114744

name	Nck2 (ENSMUSG00000066877) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:Nck2-007 Vega_transcript:OTTMUST00000120792 Uniprot/SPTREMBL:A0A087WQT7 EMBL:AC107865 EMBL:AC108914 GO:GO:0001771 GO:GO:0005783 GO:GO:0007015 GO:GO:0012506 GO:GO:0016477 GO:GO:0030032 GO:GO:0030838 GO:GO:0032403 GO:GO:0033137 GO:GO:0042102 GO:GO:0045202 GO:GO:0045944 GO:GO:0048013 GO:GO:0060996 GO:GO:0097481 GO:GO:1903912 MGI_trans_name:Nck2-007 Vega_translation:179152 Vega_translation:OTTMUSP00000066779 goslim_goa:GO:0002376 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005737 goslim_goa:GO:0005783 goslim_goa:GO:0007010 goslim_goa:GO:0007165 goslim_goa:GO:0008150 goslim_goa:GO:0022607 goslim_goa:GO:0030154 goslim_goa:GO:0040011 goslim_goa:GO:0043226 goslim_goa:GO:0048856 goslim_goa:GO:0048870 OTTP:OTTMUSP00000066779 OTTT:OTTMUST00000120792 UniParc:UPI0004620FD5
definition	note : transcript_id=ENSMUST00000187435 protein_id : ENSMUSP00000140338 translation : MTEEVIVIAKWDYTAQQDQEL

name	Nck2 (ENSMUSG00000066877) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS14924.1 Uniprot/SWISSPROT:O55033 RefSeq_peptide:NP_035009 RefSeq_mRNA:NM_010879.3 RefSeq_mRNA_predicted:XM_006495772 RefSeq_peptide_predicted:XP_006495835.1 Vega_transcript:Nck2-001 Vega_transcript:OTTMUST00000049828 UCSC:uc007avo.2 EMBL:AC107865 EMBL:AC108914 EMBL:AF043260 EMBL:BC011071 EMBL:BC034255 EMBL:CH466589 GO:GO:0001771 GO:GO:0001771 GO:GO:0005783 GO:GO:0005783 GO:GO:0007015 GO:GO:0012506 GO:GO:0016477 GO:GO:0030032 GO:GO:0030838 GO:GO:0030838 GO:GO:0032403 GO:GO:0033137 GO:GO:0033137 GO:GO:0036493 GO:GO:0042102 GO:GO:0042102 GO:GO:0045202 GO:GO:0045202 GO:GO:0045944 GO:GO:0045944 GO:GO:0048013 GO:GO:0060996 GO:GO:0060996 GO:GO:0097110 GO:GO:0097481 GO:GO:0097481 GO:GO:1902237 GO:GO:1903898 GO:GO:1903912 GO:GO:1903912 GO:GO:1990441 MGI_trans_name:Nck2-001 Vega_translation:179153 Vega_translation:OTTMUSP00000023150 goslim_goa:GO:0002376 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005737 goslim_goa:GO:0005783 goslim_goa:GO:0006950 goslim_goa:GO:0007010 goslim_goa:GO:0007165 goslim_goa:GO:0008150 goslim_goa:GO:0022607 goslim_goa:GO:0030154 goslim_goa:GO:0040011 goslim_goa:GO:0043226 goslim_goa:GO:0048856 goslim_goa:GO:0048870 protein_id:AAC06353.1 protein_id:AAH11071.1 protein_id:AAH34255.1 protein_id:EDK96908.1 OTTP:OTTMUSP00000023150 OTTT:OTTMUST00000049828 Reactome:R-MMU-1266738 Reactome:R-MMU-1500931 Reactome:R-MMU-162582 Reactome:R-MMU-186763 Reactome:R-MMU-186797 Reactome:R-MMU-194138 Reactome:R-MMU-2682334 Reactome:R-MMU-373753 Reactome:R-MMU-376176 Reactome:R-MMU-3928664 Reactome:R-MMU-422475 Reactome:R-MMU-428540 Reactome:R-MMU-4420097 UniParc:UPI00000227AF
definition	note : transcript_id=ENSMUST00000086421 protein_id : ENSMUSP00000083611 translation : MTEEVIVIAKWDYTAQQDQELDIRKNERLWLLDDSKTWWRVRNAANRTGYVPSNYVERKNSLKKGSLVKNLKDTLGLGKTRRKPSARDASPTPSTDAEYPANGSGADRIYDLNIPAFVKFAYVAEREDELSLVKGSRVTVMEKCSDGWWRGSFNGQIGWFPSNYVLEEADEAAAEAPSFLSLRRGTALSNGQGARVLHVVQTLYPFSSVTEEELSFEKGETMEVIEKPENDPEWWKCKNARGQVGLVPKNYVVVLSDGPALHPAHTPQISYTGPSASGRFAGREWYYGNVTRHQAECALNERGVEGDFLIRDSESSPSDFSVSLKASGRNKHFKVQLVDSVYCIGQRRFHSMDELVEHYKKAPIFTSEHGEKLYLVRALQ

name	Nck2 (ENSMUSG00000066877) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:Nck2-008 Vega_transcript:OTTMUST00000138737 MGI_trans_name:Nck2-008 Vega_translation:179154 Vega_translation:OTTMUSP00000072900 OTTP:OTTMUSP00000072900 OTTT:OTTMUST00000138737 UniParc:UPI0006454801
definition	note : transcript_id=ENSMUST00000202540 protein_id : ENSMUSP00000144224 translation : MTEEVIVIAKWDYTAQQDQELDIRKNERLWLLDDSKTWWRVRNAANRTGYVPSNYVERKNSLKKGSLVKNLKDTLGLGKTRRKPSARDASPTPSTDAEYPANGSGADRIYDLNIPAFVKFAYVAEREDELSLVKGSRVTVME

name	Nck2 (ENSMUSG00000066877) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:Nck2-005 Vega_transcript:OTTMUST00000120793 Uniprot/SPTREMBL:A0A0A0MQF0 GO:GO:0001771 GO:GO:0005783 GO:GO:0007015 GO:GO:0012506 GO:GO:0016477 GO:GO:0030032 GO:GO:0030838 GO:GO:0032403 GO:GO:0033137 GO:GO:0042102 GO:GO:0045202 GO:GO:0045944 GO:GO:0048013 GO:GO:0060996 GO:GO:0097481 GO:GO:1903912 MGI_trans_name:Nck2-005 Vega_translation:179155 Vega_translation:OTTMUSP00000066780 goslim_goa:GO:0002376 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005737 goslim_goa:GO:0005783 goslim_goa:GO:0007010 goslim_goa:GO:0007165 goslim_goa:GO:0008150 goslim_goa:GO:0022607 goslim_goa:GO:0030154 goslim_goa:GO:0040011 goslim_goa:GO:0043226 goslim_goa:GO:0048856 goslim_goa:GO:0048870 OTTP:OTTMUSP00000066780 OTTT:OTTMUST00000120793 UniParc:UPI0004621084
definition	codon_start : 3 note : transcript_id=ENSMUST00000114744 protein_id : ENSMUSP00000110392 translation : XTEEVIVIAKWDYTAQQDQELDIRKNERLWLLDDSKTWWRVRNAANRTGYVPSNYVERKNSLKKGSLVKNLKDTLAQ

name
type	STS
link
xref	UniSTS_NUM:128735 UniSTS:D1Mit375
definition	note : map_weight=1 standard_name : D1Mit375

name
type	STS
link
xref	UniSTS_NUM:122852 UniSTS:06.MMHAP25FRB9.seq
definition	note : map_weight=1 standard_name : 06.MMHAP25FRB9.seq

name
type	STS
link
xref	UniSTS_NUM:128591 UniSTS:D1Mit248
definition	note : map_weight=1 standard_name : D1Mit248

name
type	STS
link
xref	UniSTS_NUM:207153 UniSTS:AF043260 WI_MRC-RH:286578
definition	note : map_weight=2 standard_name : AF043260

name
type	misc_feature
link
xref
definition	note : contig AC107865.7 45588..204959(1)

name
type	misc_feature
link
xref
definition	note : contig AC108914.8 18723..212494(1)

name	Nck2 (ENSMUSG00000066877)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000049830 Vega_transcript:OTTMUST00000049830 UCSC:uc007avn.1 MGI_trans_name:Nck2-003 OTTT:OTTMUST00000049830
definition	note : processed_transcript note : transcript_id=ENSMUST00000136648

name	Nck2 (ENSMUSG00000066877)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000049831 Vega_transcript:OTTMUST00000049831 MGI_trans_name:Nck2-004 OTTT:OTTMUST00000049831
definition	note : processed_transcript note : transcript_id=ENSMUST00000124817

name	Gm37536 (ENSMUSG00000103422)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000120795 Vega_transcript:OTTMUST00000120795 Clone_based_vega_transcript:RP23-389C9.3-001 MGI_trans_name:Gm37536-001 OTTT:OTTMUST00000120795
definition	note : TEC note : transcript_id=ENSMUST00000194710

name	Gm38228 (ENSMUSG00000103945)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000120798 Vega_transcript:OTTMUST00000120798 Clone_based_vega_transcript:RP23-435E15.3-001 MGI_trans_name:Gm38228-001 OTTT:OTTMUST00000120798
definition	note : TEC note : transcript_id=ENSMUST00000193169

Polymorphisms Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Nck2 (ENSMUSG00000066877)
Transcript ID	ENSMUST00000086421

Reports
substitution
cSNPs	7
Insertion	121
Deletion	132
SNPs	-1kb 43440889(c.-92679C>T), 43440890(c.-92678A>G), 43440900(c.-92668A>G), 43441065(c.-92503T>C), 43441114(c.-92454T>G), 43441115(c.-92453T>G), 43441139(c.-92429A>G), 43441252(c.-92316G>T), 43441284(c.-92284C>T), 43441292(c.-92276T>A), 43441318(c.-92250G>A), 43441329(c.-92239C>T), 43441390(c.-92178C>T), 43441457(c.-92111A>G), 43441533(c.-92035C>A), 43441688(c.-91880A>G), 43441706(c.-91862C>T), 43441707(c.-91861A>G), 43441832(c.-91736A>G), 43441859(c.-91709T>C), 43441912(c.-91656C>T), 43442020(c.-91548T>C), 43442111(c.-91457G>T), 43442281(c.-91287C>T), 43442294(c.-91274G>A), 43442337(c.-91231C>T), 43442363(c.-91205G>A), 43442570(c.-90998T>G), 43442615(c.-90953A>G), 43444431(c.-89137T>C), 43444528(c.-89040A>T), 43444678(c.-88890T>C), 43444800(c.-88768G>T), 43444910(c.-88658G>C), 43445035(c.-88533T>A), 43445078(c.-88490T>C), 43445100(c.-88468C>A), 43445487(c.-88081C>T), 43445564(c.-88004A>C), 43445589(c.-87979C>T), 5'UTR CDS 43533699(c.132T>G), 43553958(c.324C>T), 43554096(c.462C>T), 43554130(c.496T>C), 43554141(c.507G>A), 43554414(c.780T>A), 43554426(c.792T>G), 3'UTR 43569442(c.100T>C), 43569749(c.407A>C), INTRON 43446076(c.-180+49A>G), 43446088(c.-180+61A>G), 43446231(c.-180+204T>A), 43446292(c.-180+265C>A), 43446310(c.-180+283T>A), 43446877(c.-180+850A>C), 43447231(c.-180+1204C>T), 43447237(c.-180+1210T>C), 43447331(c.-180+1304G>C), 43447332(c.-180+1305G>T), 43447403(c.-180+1376A>G), 43447502(c.-180+1475G>T), 43447524(c.-180+1497T>C), 43447621(c.-180+1594C>T), 43447719(c.-180+1692C>T), 43447735(c.-180+1708G>A), 43447758(c.-180+1731A>G), 43447858(c.-180+1831T>A), 43447876(c.-180+1849T>A), 43447965(c.-180+1938G>T), 43447988(c.-180+1961A>G), 43448105(c.-180+2078G>A), 43448307(c.-180+2280C>G), 43448327(c.-180+2300A>G), 43448678(c.-180+2651C>G), 43448696(c.-180+2669C>G), 43448740(c.-180+2713A>G), 43448938(c.-180+2911C>T), 43448988(c.-180+2961A>G), 43449074(c.-180+3047T>G), 43449093(c.-180+3066A>G), 43449115(c.-180+3088C>G), 43449135(c.-180+3108C>T), 43449173(c.-180+3146T>C), 43449223(c.-180+3196C>T), 43449466(c.-180+3439A>G), 43449651(c.-180+3624G>C), 43449659(c.-180+3632C>T), 43449691(c.-180+3664A>C), 43449741(c.-180+3714T>A), 43449746(c.-180+3719A>G), 43449825(c.-180+3798T>C), 43449826(c.-180+3799T>A), 43449891(c.-180+3864T>C), 43449895(c.-180+3868G>T), 43449952(c.-180+3925G>A), 43449955(c.-180+3928G>T), 43450193(c.-180+4166G>T), 43450267(c.-180+4240A>C), 43450309(c.-180+4282G>A), 43450378(c.-180+4351T>G), 43450407(c.-180+4380T>C), 43450408(c.-180+4381G>A), 43450437(c.-180+4410A>T), 43450440(c.-180+4413A>G), 43450475(c.-180+4448A>G), 43450489(c.-180+4462T>G), 43450580(c.-180+4553A>G), 43450591(c.-180+4564A>G), 43450808(c.-180+4781A>G), 43450853(c.-180+4826C>T), 43451791(c.-180+5764A>C), 43452144(c.-180+6117G>A), 43452433(c.-180+6406T>A), 43452469(c.-180+6442T>C), 43452754(c.-180+6727C>T), 43452862(c.-180+6835A>C), 43453042(c.-180+7015T>C), 43453043(c.-180+7016G>C), 43454199(c.-180+8172A>G), 43454428(c.-180+8401T>C), 43454435(c.-180+8408A>G), 43454608(c.-180+8581T>C), 43454898(c.-180+8871C>T), 43454930(c.-180+8903T>G), 43455026(c.-180+8999C>T), 43455050(c.-180+9023C>T), 43455120(c.-180+9093G>T), 43455137(c.-180+9110G>A), 43455203(c.-180+9176G>A), 43455757(c.-180+9730T>C), 43455758(c.-180+9731T>C), 43455945(c.-180+9918A>G), 43456082(c.-180+10055G>C), 43456162(c.-180+10135C>G), 43456287(c.-180+10260T>G), 43456328(c.-180+10301A>G), 43456366(c.-180+10339G>T), 43456385(c.-180+10358G>A), 43456407(c.-180+10380C>G), 43456420(c.-180+10393G>T), 43456485(c.-180+10458T>C), 43456516(c.-180+10489A>G), 43456620(c.-180+10593T>G), 43456639(c.-180+10612C>T), 43456723(c.-180+10696G>A), 43456749(c.-180+10722C>T), 43456757(c.-180+10730A>G), 43456843(c.-180+10816C>T), 43457028(c.-180+11001A>G), 43457050(c.-180+11023C>T), 43457222(c.-180+11195T>G), 43457279(c.-180+11252G>A), 43457431(c.-180+11404A>G), 43457530(c.-180+11503G>T), 43457534(c.-180+11507T>C), 43457553(c.-180+11526C>T), 43457563(c.-180+11536G>A), 43457605(c.-180+11578G>A), 43457728(c.-180+11701T>C), 43457921(c.-180+11894G>A), 43457926(c.-180+11899G>A), 43458064(c.-180+12037A>C), 43458130(c.-180+12103T>C), 43458153(c.-180+12126C>T), 43458238(c.-180+12211C>T), 43458278(c.-180+12251G>T), 43458301(c.-180+12274A>G), 43458514(c.-180+12487C>T), 43458590(c.-180+12563A>T), 43458595(c.-180+12568T>C), 43458632(c.-180+12605T>G), 43458888(c.-180+12861T>G), 43459012(c.-180+12985T>C), 43459017(c.-180+12990A>G), 43459036(c.-180+13009A>G), 43459037(c.-180+13010T>A), 43459039(c.-180+13012C>T), 43459043(c.-180+13016T>C), 43459208(c.-180+13181C>T), 43459240(c.-180+13213A>G), 43459242(c.-180+13215T>C), 43459554(c.-180+13527C>T), 43459897(c.-180+13870G>A), 43459988(c.-180+13961A>G), 43459991(c.-180+13964A>G), 43460048(c.-180+14021C>T), 43460061(c.-180+14034T>C), 43460097(c.-180+14070A>G), 43460108(c.-180+14081C>T), 43460252(c.-180+14225T>C), 43460254(c.-180+14227G>A), 43460255(c.-180+14228G>A), 43460373(c.-180+14346G>A), 43460378(c.-180+14351C>T), 43460393(c.-180+14366A>T), 43460483(c.-180+14456T>C), 43460604(c.-180+14577C>T), 43460778(c.-180+14751G>A), 43461090(c.-180+15063C>T), 43461282(c.-180+15255A>G), 43461421(c.-180+15394T>C), 43463300(c.-180+17273C>G), 43463761(c.-180+17734G>A), 43463913(c.-180+17886T>C), 43464003(c.-180+17976T>C), 43464182(c.-180+18155G>A), 43464220(c.-180+18193C>G), 43464559(c.-180+18532A>T), 43464581(c.-180+18554C>T), 43464754(c.-180+18727A>G), 43464768(c.-180+18741C>T), 43464775(c.-180+18748C>T), 43464816(c.-180+18789G>T), 43465055(c.-180+19028C>T), 43465143(c.-180+19116T>C), 43465303(c.-180+19276G>A), 43465367(c.-180+19340A>G), 43465457(c.-180+19430A>C), 43465462(c.-180+19435T>C), 43465485(c.-180+19458A>G), 43465574(c.-180+19547A>G), 43466206(c.-180+20179C>T), 43466362(c.-180+20335T>C), 43466363(c.-180+20336C>A), 43466369(c.-180+20342T>A), 43466532(c.-180+20505C>T), 43466642(c.-180+20615T>C), 43466645(c.-180+20618A>G), 43466680(c.-180+20653T>C), 43466683(c.-180+20656A>T), 43466725(c.-180+20698G>T), 43466797(c.-180+20770G>C), 43466861(c.-180+20834G>A), 43466939(c.-180+20912T>C), 43466983(c.-180+20956T>C), 43466985(c.-180+20958C>T), 43466999(c.-180+20972A>C), 43467084(c.-180+21057T>C), 43467131(c.-180+21104T>C), 43467459(c.-180+21432T>C), 43467460(c.-180+21433A>G), 43467498(c.-180+21471A>G), 43467538(c.-180+21511A>T), 43467580(c.-180+21553G>A), 43467780(c.-180+21753C>A), 43467796(c.-180+21769C>A), 43467982(c.-180+21955G>T), 43468110(c.-180+22083A>G), 43468308(c.-180+22281T>C), 43468348(c.-180+22321C>G), 43468353(c.-180+22326A>G), 43468458(c.-180+22431C>T), 43468491(c.-180+22464C>T), 43468496(c.-180+22469C>A), 43468610(c.-180+22583A>G), 43468710(c.-180+22683C>T), 43469052(c.-180+23025C>G), 43469054(c.-180+23027T>C), 43469247(c.-180+23220G>A), 43469529(c.-180+23502T>C), 43469697(c.-180+23670A>T), 43469711(c.-180+23684T>C), 43469819(c.-180+23792T>C), 43469839(c.-180+23812A>C), 43469930(c.-180+23903C>T), 43470002(c.-180+23975T>C), 43470063(c.-180+24036A>G), 43470139(c.-180+24112A>G), 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43557688(c.948+3106G>C), 43557693(c.948+3111T>G), 43557822(c.948+3240G>C), 43557857(c.948+3275T>G), 43557901(c.948+3319C>A), 43557976(c.948+3394G>A), 43558028(c.948+3446A>G), 43558128(c.948+3546C>T), 43558138(c.948+3556A>G), 43558140(c.948+3558C>T), 43558201(c.948+3619T>C), 43558207(c.948+3625T>C), 43558262(c.948+3680G>C), 43558272(c.948+3690C>T), 43558304(c.948+3722G>A), 43558416(c.948+3834T>C), 43558460(c.948+3878T>A), 43558471(c.948+3889G>A), 43558584(c.948+4002A>G), 43558620(c.948+4038T>C), 43558744(c.948+4162C>G), 43558847(c.948+4265T>C), 43558916(c.948+4334A>C), 43558971(c.948+4389A>G), 43558979(c.948+4397G>A), 43559080(c.948+4498G>A), 43559169(c.948+4587T>C), 43559202(c.948+4620C>T), 43559286(c.948+4704C>A), 43559335(c.948+4753G>A), 43559370(c.948+4788T>G), 43559420(c.948+4838C>G), 43559434(c.948+4852A>C), 43559439(c.948+4857G>T), 43559468(c.948+4886C>T), 43559534(c.948+4952A>G), 43559601(c.948+5019T>C), 43559608(c.948+5026A>G), 43559650(c.948+5068C>A), 43559951(c.948+5369G>A), 43559980(c.948+5398A>G), 43560019(c.948+5437C>T), 43560092(c.948+5510A>C), 43560109(c.948+5527C>G), 43560203(c.948+5621G>A), 43560352(c.948+5770G>A), 43560397(c.948+5815G>A), 43560455(c.948+5873G>T), 43560476(c.948+5894T>A), 43560490(c.948+5908A>C), 43560694(c.948+6112T>C), 43560729(c.948+6147G>A), 43561006(c.948+6424T>C), 43561045(c.948+6463A>G), 43561119(c.948+6537T>G), 43561137(c.948+6555A>G), 43561202(c.948+6620A>C), 43561427(c.948+6845A>G), 43561431(c.948+6849A>G), 43561505(c.948+6923T>C), 43561882(c.949-7266T>A), 43561883(c.949-7265T>A), 43561942(c.949-7206C>T), 43562024(c.949-7124A>G), 43562102(c.949-7046G>C), 43562155(c.949-6993A>G), 43562187(c.949-6961C>T), 43562226(c.949-6922C>T), 43562668(c.949-6480T>C), 43562894(c.949-6254A>C), 43562976(c.949-6172G>T), 43563133(c.949-6015C>T), 43563411(c.949-5737A>T), 43563412(c.949-5736A>G), 43563426(c.949-5722G>C), 43563699(c.949-5449G>A), 43563815(c.949-5333C>A), 43563898(c.949-5250G>C), 43564091(c.949-5057C>T), 43564120(c.949-5028A>C), 43564183(c.949-4965C>T), 43564230(c.949-4918A>G), 43564304(c.949-4844A>T), 43564377(c.949-4771A>G), 43564654(c.949-4494G>A), 43564688(c.949-4460A>G), 43564710(c.949-4438A>G), 43564756(c.949-4392T>C), 43564847(c.949-4301A>G), 43564848(c.949-4300G>A), 43564916(c.949-4232G>A), 43565143(c.949-4005C>T), 43565443(c.949-3705A>G), 43565451(c.949-3697C>G), 43565551(c.949-3597A>G), 43566017(c.949-3131C>A), 43566080(c.949-3068T>G), 43566240(c.949-2908A>T), 43566406(c.949-2742T>A), 43566418(c.949-2730T>G), 43566419(c.949-2729T>C), 43566475(c.949-2673A>G), 43566627(c.949-2521A>G), 43566838(c.949-2310G>T), 43567104(c.949-2044G>C), 43567222(c.949-1926A>G), 43567407(c.949-1741A>C), 43567425(c.949-1723A>G), 43567451(c.949-1697A>G), 43567894(c.949-1254C>G), 43567916(c.949-1232G>A), 43568001(c.949-1147A>C), 43568381(c.949-767A>G), 43568648(c.949-500T>G), 43568954(c.949-194T>C), 43568966(c.949-182C>A), 43569013(c.949-135C>T), 43569038(c.949-110T>C), +1kb 43570565(c.1223G>A), 43570572(c.1230T>C), 43570576(c.1234G>A), 43570817(c.1475T>C), 43570818(c.1476G>A), 43570825(c.1483T>G), 43570845(c.1503T>A), 43570852(c.1510C>T), 43570920(c.1578G>A), 43571098(c.1756T>C), 43571099(c.1757G>A), 43571381(c.2039G>A), 43571388(c.2046C>A), 43571436(c.2094T>A), 43571619(c.2277C>A), 43571671(c.2329C>A), 43572002(c.2660G>T), 43572019(c.2677A>G), 43572029(c.2687T>C), 43572048(c.2706A>C), 43572139(c.2797C>G), 43572154(c.2812G>A), 43572284(c.2942A>G), 43572295(c.2953A>G), 43572331(c.2989T>A), 43572457(c.3115A>G), 43572577(c.3235A>C), 43572621(c.3279A>G), 43572684(c.3342C>T), 43572886(c.3544C>T), 43572963(c.3621A>G), 43572977(c.3635C>G), 43573005(c.3663A>C), 43573016(c.3674T>A), 43573241(c.3899C>T), 43573285(c.3943T>C), 43573300(c.3958G>C), 43573308(c.3966A>G), 43573398(c.4056A>C), 43573441(c.4099A>G), 43573594(c.4252A>T), 43573710(c.4368C>T), 43574266(c.4924A>T), 43574292(c.4950A>G), 43574341(c.4999T>C), 43574353(c.5011T>A), 43574356(c.5014G>A), 43574388(c.5046G>T), 43574392(c.5050G>A), 43574479(c.5137C>T), 43574481(c.5139C>T), 43574561(c.5219T>C), 43574666(c.5324G>A), 43574839(c.5497A>T), 43574932(c.5590T>C), 43575044(c.5702T>G), 43575111(c.5769C>T), 43575319(c.5977A>G), 43575321(c.*5979G>C),
Insertions	-1kb 43441202 (c.-92366_-92365insG), 43443303 (c.-90265_-90264insT), 5'UTR CDS 3'UTR 43569837 (c.495_496insCT), 43569856 (c.514_515insTT), 43570185 (c.843_844insGA), 43570245 (c.916_919dupTATA), 43570261 (c.914_919dupTATATA), INTRON 43448016 (c.-180+1990dupA), 43449588 (c.-180+3563_-180+3564insCTGAGA), 43451061 (c.-180+5031_-180+5038dupCTTACTTA), 43452365 (c.-180+6337_-180+6338dupTT), 43454962 (c.-180+8936_-180+8937dupTT), 43457408 (c.-180+11381_-180+11382insC), 43458408 (c.-180+12382_-180+12384dupGAG), 43458597 (c.-180+12578dupA), 43458777 (c.-180+12750_-180+12751insAA), 43459297 (c.-180+13270_-180+13271insGTT), 43459637 (c.-180+13611_-180+13612insCCC), 43463765 (c.-180+17738dupA), 43463827 (c.-180+17800_-180+17801insGAAAATTTCGT), 43464796 (c.-180+18772dupT), 43467232 (c.-180+21206dupC), 43467636 (c.-180+21615dupA), 43467959 (c.-180+21932_-180+21933insCT), 43468691 (c.-180+22661_-180+22664dupCACA), 43469787 (c.-180+23761_-180+23762insTGTT), 43473160 (c.-180+27134_-180+27136dupCCC), 43473323 (c.-180+27303dupA), 43474619 (c.-180+28593_-180+28597dupCTTCT), 43477318 (c.-180+31286_-180+31291dupGTTTTG), 43477486 (c.-180+31459dupT), 43478117 (c.-179-31503dupA), 43478679 (c.-179-30942dupG), 43478692 (c.-179-30929_-179-30928insCC), 43479739 (c.-179-29881_-179-29880dupAA), 43480056 (c.-179-29564_-179-29563dupTG), 43480845 (c.-179-28773_-179-28769dupTTTTT), 43482246 (c.-179-27373_-179-27371dupTTT), 43485215 (c.-179-24398_-179-24397dupTA), 43486304 (c.-179-23304_-179-23300dupAACAA), 43487337 (c.-179-22284_-179-22283insAA), 43490209 (c.-179-19409_-179-19407dupCTT), 43491536 (c.-179-18086_-179-18085dupAA), 43491549 (c.-179-18071dupA), 43492644 (c.-179-16973dupT), 43493118 (c.-179-16502_-179-16499dupTTTA), 43494700 (c.-179-14918dupC), 43494787 (c.-179-14830_-179-14829insTTATA), 43496236 (c.-179-13378dupA), 43498273 (c.-179-11348_-179-11347insT), 43498885 (c.-179-10731_-179-10730dupTT), 43499434 (c.-179-10187dupA), 43499552 (c.-179-10068_-179-10067dupCT), 43499884 (c.-179-9729dupT), 43500858 (c.-179-8763_-179-8762insTTG), 43500953 (c.-179-8660_-179-8658dupTTT), 43502297 (c.-179-7323dupG), 43503314 (c.-179-6306_-179-6305insGT), 43503698 (c.-179-5920_-179-5919dupTT), 43505968 (c.-179-3644dupT), 43509352 (c.-179-269_-179-268insTGT), 43509870 (c.-17+87_-17+88insGGAA), 43510672 (c.-17+893_-17+894dupGA), 43511165 (c.-17+1384_-17+1385dupTT), 43512682 (c.-17+2900_-17+2901dupCT), 43513749 (c.-17+3973_-17+3974dupTC), 43515645 (c.-17+5860_-17+5862dupTGT), 43515687 (c.-17+5904_-17+5905insT), 43515690 (c.-17+5907_-17+5908insT), 43516272 (c.-17+6489_-17+6490insGTTT), 43519443 (c.-17+9663dupC), 43519849 (c.-17+10081_-17+10084dupGTTT), 43520278 (c.-17+10501dupC), 43521039 (c.-17+11260dupA), 43526680 (c.-16-6867dupT), 43527604 (c.-16-5947dupA), 43528596 (c.-16-4952dupT), 43528824 (c.-16-4728_-16-4727insA), 43528834 (c.-16-4718_-16-4717insA), 43531172 (c.-16-2380_-16-2379insC), 43532423 (c.-16-1128_-16-1127dupAG), 43535469 (c.226+1676dupT), 43535530 (c.226+1747dupA), 43535541 (c.226+1748_226+1749insA), 43537664 (c.226+3875_226+3876dupCT), 43537879 (c.226+4090_226+4091insTCCCA), 43539493 (c.226+5702dupG), 43539882 (c.226+6090_226+6091insTCCCC), 43540562 (c.226+6770_226+6771insACTCG), 43543698 (c.226+9914_226+9915dupTT), 43545546 (c.227-8315_227-8314insTT), 43546139 (c.227-7720_227-7719dupAA), 43546758 (c.227-7103_227-7102insGTC), 43548324 (c.227-5538_227-5537dupGC), 43550006 (c.227-3848_227-3847dupTT), 43551065 (c.227-2796_227-2795insA), 43552936 (c.227-923_227-922insGGA), 43553479 (c.227-379_227-378insACCCCCC), 43556203 (c.948+1623dupA), 43556205 (c.948+1623dupA), 43556351 (c.948+1771_948+1772insAGAAAA), 43557533 (c.948+2954dupT), 43558188 (c.948+3607dupT), 43559106 (c.948+4525_948+4530dupAATGTA), 43561893 (c.949-7256_949-7255dupAA), 43561900 (c.949-7247_949-7246insGA), 43561903 (c.949-7245_949-7244insGAAA), 43564197 (c.949-4954_949-4951dupTATT), 43564661 (c.949-4487_949-4486insGTC), 43566476 (c.949-2670dupA), 43566479 (c.949-2668dupA), 43567467 (c.949-1681_949-1677dupAAAGA), +1kb 43570694 (c.1352_1353insCA), 43570891 (c.1549_1550insC), 43572685 (c.3343_3344insA), 43573459 (c.4117_4118insATC), 43573623 (c.4281_4282insT), 43573686 (c.4344_4345insAAAAT), 43574393 (c.5051_5052insT), 43574921 (c.5579_5580insA), 43575097 (c.5755_5756insGGT),
Deletions	-1kb 43441585 (c.-91982delA), 43442435 (c.-91132delT), 43444886 (c.-88681_-88676delCTTTCT), 5'UTR CDS 3'UTR 43445765 (c.-439delG), 43569469 (c.131_133delCTT), 43569839 (c.498delC), INTRON 43447716 (c.-180+1694delC), 43449908 (c.-180+3884delA), 43450930 (c.-180+4904_-180+4911delAGCAAGCA), 43451759 (c.-180+5737_-180+5738delGT), 43454730 (c.-180+8704_-180+8705delAA), 43454750 (c.-180+8733_-180+8740delCTTGGATG), 43457085 (c.-180+11059_-180+11060delTT), 43457124 (c.-180+11106_-180+11108delAAA), 43457132 (c.-180+11106_-180+11108delAAA), 43458785 (c.-180+12759_-180+12765delCCTGCCT), 43459262 (c.-180+13240delT), 43459266 (c.-180+13240delT), 43459310 (c.-180+13284delA), 43459658 (c.-180+13632delT), 43459748 (c.-180+13725delC), 43460833 (c.-180+14815delT), 43461799 (c.-180+15774_-180+15779delAACAAA), 43462332 (c.-180+16312delG), 43463962 (c.-180+17941delA), 43466909 (c.-180+20887_-180+20890delCTGA), 43468229 (c.-180+22203_-180+22207delCCCCC), 43468515 (c.-180+22490_-180+22498delATCAGTTAA), 43468803 (c.-180+22783_-180+22789delGTTAAGA), 43468982 (c.-180+22956delT), 43469113 (c.-180+23087_-180+23094delGCTTGCTT), 43470487 (c.-180+24483_-180+24486delGTGT), 43470796 (c.-180+24770_-180+24771delTC), 43472558 (c.-180+26534delG), 43472688 (c.-180+26676_-180+26680delTTCTT), 43472908 (c.-180+26886_-180+26891delTTTCTT), 43474571 (c.-180+28545_-180+28547delTTC), 43475763 (c.-180+29739delG), 43475888 (c.-180+29862_-180+29863delAA), 43476186 (c.-180+30185_-180+30188delTGTG), 43476627 (c.-180+30602_-180+30605delTACT), 43477201 (c.-180+31179delT), 43482168 (c.-179-27452delG), 43482220 (c.-179-27400_-179-27395delTGTGTG), 43482943 (c.-179-26677_-179-26670delTCACAGCC), 43486113 (c.-179-23507_-179-23504delATAC), 43487702 (c.-179-21918delT), 43488521 (c.-179-21099_-179-21097delTCG), 43488946 (c.-179-20672delC), 43489066 (c.-179-20554_-179-20546delTGAAGCTTG), 43489340 (c.-179-20280_-179-20274delGGACAGA), 43489425 (c.-179-20190_-179-20187delTTTT), 43491528 (c.-179-18092_-179-18091delGA), 43491542 (c.-179-18078_-179-18073delAAGAAG), 43493417 (c.-179-16203_-179-16202delTT), 43493925 (c.-179-15695_-179-15694delAT), 43493974 (c.-179-15646_-179-15644delGTC), 43495809 (c.-179-13811_-179-13802delAAAAAACAAA), 43496793 (c.-179-12827_-179-12825delATA), 43497154 (c.-179-12460_-179-12458delCTC), 43497357 (c.-179-12259_-179-12256delTAGT), 43497575 (c.-179-12044_-179-12043delCT), 43500294 (c.-179-9323_-179-9321delTGT), 43500781 (c.-179-8839delG), 43503013 (c.-179-6606delC), 43504564 (c.-179-5056_-179-5054delACC), 43504602 (c.-179-5018delA), 43504640 (c.-179-4977_-179-4976delGA), 43504643 (c.-179-4977_-179-4976delGA), 43506666 (c.-179-2945delA), 43507427 (c.-179-2187_-179-2186delTG), 43508578 (c.-179-1040delA), 43509151 (c.-179-469delT), 43509829 (c.-17+48_-17+49delGT), 43509871 (c.-17+89delT), 43509934 (c.-17+159delT), 43509941 (c.-17+159delT), 43512928 (c.-17+3146delG), 43515105 (c.-17+5324_-17+5325delCC), 43515844 (c.-17+6065delG), 43519162 (c.-17+9381delA), 43520426 (c.-17+10644_-17+10650delGCTGCCT), 43520485 (c.-17+10703_-17+10704delTT), 43523206 (c.-16-10345_-16-10342delATGT), 43523900 (c.-16-9651_-16-9646delTATACA), 43523946 (c.-16-9605_-16-9601delTAAAA), 43524140 (c.-16-9411_-16-9410delCA), 43524569 (c.-16-8981delT), 43529708 (c.-16-3842delC), 43529884 (c.-16-3667delC), 43530747 (c.-16-2787_-16-2784delAGGA), 43531828 (c.-16-1715_-16-1714delGG), 43533283 (c.-16-264delT), 43533873 (c.226+82_226+83delCG), 43536433 (c.226+2642_226+2643delAA), 43536571 (c.226+2779delT), 43536739 (c.226+2955delT), 43537789 (c.226+3997_226+3998delTC), 43540953 (c.226+7162_226+7168delAATAAAA), 43541357 (c.226+7565delC), 43541578 (c.226+7788delA), 43542962 (c.226+9171delT), 43545225 (c.227-8634delC), 43545474 (c.227-8386_227-8385delCT), 43546127 (c.227-7733_227-7731delTTT), 43547318 (c.227-6535delT), 43548446 (c.227-5414_227-5407delTCATTCAT), 43552803 (c.227-1057_227-1050delCACATAAA), 43553117 (c.227-737_227-736delAA), 43555750 (c.948+1170_948+1171delGT), 43556130 (c.948+1549_948+1550delAG), 43557147 (c.948+2572delT), 43557339 (c.948+2759delA), 43557467 (c.948+2886_948+2888delAGA), 43558917 (c.948+4345delT), 43559995 (c.948+5419_948+5424delATCTTA), 43561038 (c.948+6463delA), 43561351 (c.948+6770_948+6775delATTTTT), 43561576 (c.948+6995_948+7000delAAATGG), 43563465 (c.949-5681_949-5680delCA), 43564214 (c.949-4929delA), 43564218 (c.949-4929delA), 43566429 (c.949-2718_949-2715delTTTA), 43568966 (c.949-177_949-173delTGTGC), +1kb 43570548 (c.1207_1208delCT), 43571223 (c.1882_1886delGTTCA), 43571522 (c.2181_2182delAG), 43571989 (c.2648_2649delGT), 43572159 (c.2818_2819delTA), 43572425 (c.3084_3087delTCTG), 43572862 (c.3521_3525delCTTGG), 43574153 (c.4812_*4815delAAAG),
coding sequence substitutions
premature termination by the nucleotide substitution	0
synonymous num	7
non-synonymous num	0
synonymous substitutions	43533699 (p.Ala44Ala), 43553958 (p.Arg108Arg), 43554096 (p.Asn154Asn), 43554130 (p.Leu166Leu), 43554141 (p.Ala169Ala), 43554414 (p.Ala260Ala), 43554426 (p.Ala264Ala),
non-synonymous substitutions
B6 transcript (ENSMUST00000086421)	MTEEVIVIAKWDYTAQQDQELDIRKNERLWLLDDSKTWWRVRNAANRTGYVPSNYVERKN SLKKGSLVKNLKDTLGLGKTRRKPSARDASPTPSTDAEYPANGSGADRIYDLNIPAFVKF AYVAEREDELSLVKGSRVTVMEKCSDGWWRGSFNGQIGWFPSNYVLEEADEAAAEAPSFL SLRRGTALSNGQGARVLHVVQTLYPFSSVTEEELSFEKGETMEVIEKPENDPEWWKCKNA RGQVGLVPKNYVVVLSDGPALHPAHTPQISYTGPSASGRFAGREWYYGNVTRHQAECALN ERGVEGDFLIRDSESSPSDFSVSLKASGRNKHFKVQLVDSVYCIGQRRFHSMDELVEHYK KAPIFTSEHGEKLYLVRALQ*
MSMv4 transcript	MTEEVIVIAKWDYTAQQDQELDIRKNERLWLLDDSKTWWRVRNAANRTGYVPSNYVERKN SLKKGSLVKNLKDTLGLGKTRRKPSARDASPTPSTDAEYPANGSGADRIYDLNIPAFVKF AYVAEREDELSLVKGSRVTVMEKCSDGWWRGSFNGQIGWFPSNYVLEEADEAAAEAPSFL SLRRGTALSNGQGARVLHVVQTLYPFSSVTEEELSFEKGETMEVIEKPENDPEWWKCKNA RGQVGLVPKNYVVVLSDGPALHPAHTPQISYTGPSASGRFAGREWYYGNVTRHQAECALN ERGVEGDFLIRDSESSPSDFSVSLKASGRNKHFKVQLVDSVYCIGQRRFHSMDELVEHYK KAPIFTSEHGEKLYLVRALQ*
homology	100.00 (381 / 381)

Exon Detail Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Nck2 (ENSMUSG00000066877)
Transcript ID	ENSMUST00000086421


..........GAGGAAGTTGTGAAACACCTGTGTAAGGTGACACAGTTCAGGAGCCTACT
GTCAATGGCTGCGAGGACTATAGCCAAGCTTCCTCACGTTACTTATGCCTGGGAACTTCC
TATAAGAAGGCAGGCAACTTTTCTTTCTTTCTTTTTCTTTTTTTGTTACCTAGGGTGAAT
TGTTTCTGCCTTAATAAGGAGGAAACAAGGGCTAGGGTTGAATCTCATTAACATAAATGT
GAGTCGTCCGACCTGAAAGCGGAATTTATTTGAATATCAGGGGTTCCTTTGGGGAATAAG
GAGCGAAGGAGCTTGGAGAAGAAACCTCTGGATCCAGCCCTTCTCTTCGATCCAGGGTTA
TAGCTTTCCAAGTTTGCTTATAGGTTAGCTACTACTCAAGTCTGGGAGAGCAAGGTTTCC
TTCTAAAGCTTTCTCAGCCTCCTGTACTAAAGAATTCCTGGGCTCTAATAAACTGGCCAG
GACGCTGCGGAGGCAGCTGAGGTCGGGTTTCCTCTCCTCCCCCACTAGGAAGTGGTCCCG
CCTGGAGGTTGGGGGTGGGGGGGATGGAGTAAAAAAGTGTCTGGATGGGAAAGTAAATAA
ATGCAAGGCAAATAAATAAAGAAAATGCCCACAAGCAATTACTGGGAGGAAGTGACATTT
TTATGTAAGTCACTTTTCTGACAGACACCAGGCCTGTTTGGCTGAGAGTGCCGTGGGAAT
GCTTGGGGGGCGGGGTAGGGAGGTCGTTGTAAGGCTCCCGACGCACAGCCGGGTGCGGAG
ACCACCCGGTCTCGTGGGCTGCAAGTGGCACCTCCTTATCCCTCGCAGCCCCTCCCGGGT
GCCCCCAGTTCCAATCTAGAGCGGGTTACGGCTTGAAGCCCCCAGGCGGCGCTTTCCCGA
GGCCTGGCTGGGACTCCCAGGTGGGTCCCCCGCCCCGCGTGCGCCGGGCTGGGCCGGCCC
CTGGGCGGCGTCACGGCAGCCAGGGAGGAGCGCGGGCGGGGAGCGCGCGG
AGGCGGGCGCTGCGCGGGAGGGTCGCCGCCGCGGATCGCAGGCCGGTGCGCGCGGCCGAGCGGGCGGCGGCGGCGACGGTGGTGGTGAGGAGGGCTCGGCGGCAGGCAGGCTCGGGGCTCCCGGGCCGGCGGGGTCCGCCGGGTCCAATTGCGTCCGCTTGGTGGCGGGAGGAGGGAGCGGTGCAGACAAAGAGCGGCATCTGGGCGGGCGCAGCGCGGCCGCCGCCCCGGGACTCGCGCTGCTGCCCTCCGGCCTCGGCGTGCACTGTGCGGCGAG
GTAAGGCGATGGCGGGGGCTGCAAA..........TGTGTTCCTTTTAATTTCTCTGCAG
ATCCCACGGGTTCCTCTCCTATAGTGTCATCCCAGCTGGCTTAAGAGCTTGGACGATCACTATAGCTCTGTCACCTTCAAGGTGTCCTCAGACAGCAGAAAACCTCATCTTTTTGAAGAGTGCTACAATTTTTCCAGTCACCTCTTGTAACTGCGTGCCAAAG
GTAAGCCTATACATTTCTGCATAGA..........GCATCTTTAAATGTTTTGCTGGCAG
AAGGACTCCATGAAAGATGACAGAAGAAGTCATTGTCATAGCCAAGTGGGACTACACTGCCCAGCAGGACCAGGAGCTCGACATCAGGAAGAACGAGCGGTTGTGGCTGCTAGATGACTCCAAGACGTGGTGGCGGGTGAGGAATGCGGCCAACAGGACAGGCTACGTGCCTTCCAACTATGTGGAGCGTAAGAACAGCCTGAAGAAGGGCTCCCTGGTGAAGAACCTCAAGGACACACTAG
GTGAGTGTCCATACCCACAGGAACA..........TGAACCATTTGCCATGTCTTCACAG
GCCTCGGAAAGACGCGCAGGAAGCCAAGCGCTCGGGATGCTTCCCCAACGCCAAGCACTGATGCGGAGTACCCAGCCAATGGCAGCGGTGCTGACCGTATCTATGACCTCAACATCCCAGCCTTTGTCAAGTTCGCCTACGTAGCAGAACGAGAGGATGAGCTGTCCCTGGTGAAGGGCTCCCGTGTCACAGTTATGGAGAAATGCAGTGATGGCTGGTGGCGTGGCAGCTTCAATGGGCAGATCGGCTGGTTCCCCTCCAACTACGTTCTGGAGGAAGCAGACGAAGCTGCGGCTGAGGCCCCCAGCTTCCTGAGCCTACGTCGGGGCACTGCACTGAGCAATGGGCAGGGTGCACGGGTGCTGCACGTGGTGCAGACGCTGTACCCCTTCAGCTCGGTCACTGAGGAGGAGCTTAGTTTCGAGAAGGGGGAGACCATGGAGGTGATTGAGAAGCCGGAGAATGACCCTGAATGGTGGAAATGCAAAAATGCCCGAGGCCAAGTGGGCCTGGTCCCCAAAAACTACGTGGTTGTTCTCAGTGATGGGCCTGCACTGCACCCCGCGCACACCCCCCAGATCAGCTACACCGGGCCTTCAGCCAGCGGGCGCTTTGCTGGTCGGGAGTGGTACTATGGCAACGTGACACGGCACCAGGCCGAGTGTGCGCTCAATGAGCGGGGCGTCGAGGGCGACTTCCTCATTAGGGACAGCGAGTCCTCG
GTAAGTGCCCAGCAGCTCCTGTGCT..........TAACTCCCTTCTGCTTCCTCCTCAG
CCCAGTGACTTCTCCGTGTCTCTCAAAGCGTCAGGGAGAAACAAGCACTTCAAGGTGCAGCTGGTGGACAGCGTCTACTGCATTGGGCAGCGGCGGTTCCACAGCATGGACGAGCTTGTGGAGCACTACAAGAAGGCCCCCATCTTCACCAGCGAGCACGGGGAGAAGCTCTACCTTGTCCGAGCCCTACAGTGAAAGCAGCCATTGGCCCCCTCATGCCCTGCCCACTGTGGGCCTCGCTGCCACCTCTGCCTCCCAGAGCCCAGCACTTCTGGCCACCTCCACCCATGTGGCCTGGATCACCTCTGTGGCCCAGTCTGTCCTTCTTTTCAGCCCTGTTGGTCAACCACGGCTACCTAGGCCCTCACAACCATGCCCCAGGCCACCACCTTCTGGTGATGAGGGTCAGAGGGAGCAAAGCTACTCACTTCTTTCCTTTCCAGCTGGAAACAGCCTGTTTGAATCCTTACACACACATACACAGAGAGGGAAGGGGGGTGCAGAGAGAGAGACTGACTAAAAGACTGGAGCTGCTTCAGAGGGTCGCGAGGCTGTATGTAGTGAATATGTGACCTTGGCACACACTCCGAGAGCTGTGTCCCTGGGTGTTTGGTGCCTCTCGTCAGCATGCTGGTCCAGACCGGCAGCCTGTGTCCTGGGCCTGCTTTGCTTTGCTTTCTTTCTTTCTTTTTCTTTTTTTTTTTTTTCAATTTTATTTTTTAATTTTATTTTATTTTGGCTCCAGGCACTGCAGGAGTCCAAAACTGTGCGGATAGCAATACTGGAAACCCTGGGGAGATGGTGGTGAGAAAACTGCCCAGTGCCTTTGAGGCTGTACTTGCAATAAAAGAGGGTTTTGGTAAGAGTTGGTCTGCAAAAGAGGAAGGTGGCAACACAGAAAGAAAGGTACTCTGGTGATGTCCCCCAGGTGTGCCATCCACATCGTGCTTTTGCCCTTGGGCTTGTTTGAATTTCACAATTATGTATTTAATTCTCAAAGTAATATGTATCTGTAGCTGGTTGTTGACACTAATAACATGATTAAGGAAAACAGCTGATCTCTTGGGAAGGGGAGCTACCAATACTTTATACATACACTATATATATATATATAATATGTGTATATTATATATATATTATTTGCTTTACAGGGAAATTTTTCAGGGTTTACAAAAGAATATGTGATTAGTAGTAACAGAATGTTTATGAAGAAATTGCATTTTCATTTTTCTTTACATTTGAACTTCTTTATAGTTTGACTATAGAGTCTTGAGATGGCACATTCCTACAATTGAAGAAGGGGTCTTGGGATCCCCTAAACTTGCATACCCGGTTTTTTGAATATTGTAATAAAAAAAAGTATTATGA
CAAGGCTGTGTGTTTGTGTTTTGGGAGAGCTGACTCTCTTCTGGGGAAGAAACAGCCATA
AGAGTCATGGGAAATTCCCCTCCAAAGGAAGATGACGTGCTGGATCCTGTGCCTGCTGTT
AACCCAGCATGAGAACCCGAGTTCGGATACTTGGCACCCACAGAAAATTGGGCATTGGTC
GTGTCTAATCCTAGCACTGAACACATCCCCAGGCCTGCTGCTGAGGCATTCGAATCAGTC
CATGTGCACTGGGCTCAAAAGAACGATAGTAAGAGTGAAAGACACTTGGCCTCTGGATGC
ACATGAACGGGTGCACATTCACACATCACAGGCACATAAATGAGAGCTCTCAGAGGACCT
TAGCACACTGATTTCTCTACACCTTTTTGTCTTGTAGTATGTATAAGGCAGGGGCTTGTT
GTTTGTGGAAGTCACGGAAGTTGGTTCTCCACTTTTATGTGGGATCTAGGGATCAAACCC
TGGTCATCGGGCTTACAAAGCAAGCCCTTTGCTTGCTGAGCCATCTCAGCAGCCCCTGCT
GTCCACATTCTGGGTTGAAATACTCAGCCTTGGGTAGCAGAACACCAAGAGAACCCAATA
CATCAAACTAGAGTTTGCTCTTTGGAAATGAGTGGTTTAAAAGTCGATAGTTAAGCCAGA
GTCCTCTGGCTGTCTCCAAAAACCTTGTGGTGTCACTCAGTGTTGACTGTTCAGTTATTT
ACCTTCCCAAATGCAGGAATGTGTCCTATGTGCTGGCTTCCTGTCATGCGTTACAGCTTT
GAGAGGTAGCCCCGCTGACATACCCATTTAAAAGACAAAGGCTTAAAATCAGTTTGCTGG
CTACTCTGGATGAACAGGAACACTGATACAGGACTGTGCCTTAGCCCCAAATTGAACAAC
TTGAAAGTGGCTGATCCCTGAGGTTGGCTCCCCTGATTATAGGGAACCGGCCTCCATTCA
GGGAGTGACACAGGTCATTTTCCTAGACATCTGTTCTCTT..........

No.	Exon / Intron	Start	End	Start Phase	End Phase	Length	Sequence
	5' upstream sequence						..........GAGGAAGTTGTGAAACACCTGTGTAAGGTGACACAGTTCAGGAGCCTACT GTCAATGGCTGCGAGGACTATAGCCAAGCTTCCTCACGTTACTTATGCCTGGGAACTTCC TATAAGAAGGCAGGCAACTTTTCTTTCTTTCTTTTTCTTTTTTTGTTACCTAGGGTGAAT TGTTTCTGCCTTAATAAGGAGGAAACAAGGGCTAGGGTTGAATCTCATTAACATAAATGT GAGTCGTCCGACCTGAAAGCGGAATTTATTTGAATATCAGGGGTTCCTTTGGGGAATAAG GAGCGAAGGAGCTTGGAGAAGAAACCTCTGGATCCAGCCCTTCTCTTCGATCCAGGGTTA TAGCTTTCCAAGTTTGCTTATAGGTTAGCTACTACTCAAGTCTGGGAGAGCAAGGTTTCC TTCTAAAGCTTTCTCAGCCTCCTGTACTAAAGAATTCCTGGGCTCTAATAAACTGGCCAG GACGCTGCGGAGGCAGCTGAGGTCGGGTTTCCTCTCCTCCCCCACTAGGAAGTGGTCCCG CCTGGAGGTTGGGGGTGGGGGGGATGGAGTAAAAAAGTGTCTGGATGGGAAAGTAAATAA ATGCAAGGCAAATAAATAAAGAAAATGCCCACAAGCAATTACTGGGAGGAAGTGACATTT TTATGTAAGTCACTTTTCTGACAGACACCAGGCCTGTTTGGCTGAGAGTGCCGTGGGAAT GCTTGGGGGGCGGGGTAGGGAGGTCGTTGTAAGGCTCCCGACGCACAGCCGGGTGCGGAG ACCACCCGGTCTCGTGGGCTGCAAGTGGCACCTCCTTATCCCTCGCAGCCCCTCCCGGGT GCCCCCAGTTCCAATCTAGAGCGGGTTACGGCTTGAAGCCCCCAGGCGGCGCTTTCCCGA GGCCTGGCTGGGACTCCCAGGTGGGTCCCCCGCCCCGCGTGCGCCGGGCTGGGCCGGCCC CTGGGCGGCGTCACGGCAGCCAGGGAGGAGCGCGGGCGGGGAGCGCGCGG
1	EXON 1	43,445,751	43,446,027	-	-	277	AGGCGGGCGCTGCGCGGGAGGGTCGCCGCCGCGGATCGCAGGCCGGTGCGCGCGGCCGAG CGGGCGGCGGCGGCGACGGTGGTGGTGAGGAGGGCTCGGCGGCAGGCAGGCTCGGGGCTC CCGGGCCGGCGGGGTCCGCCGGGTCCAATTGCGTCCGCTTGGTGGCGGGAGGAGGGAGCG GTGCAGACAAAGAGCGGCATCTGGGCGGGCGCAGCGCGGCCGCCGCCCCGGGACTCGCGC TGCTGCCCTCCGGCCTCGGCGTGCACTGTGCGGCGAG
	INTRON 1 - 2	43,446,028	43,509,620			63,593	GTAAGGCGATGGCGGGGGCTGCAAA..........TGTGTTCCTTTTAATTTCTCTGCAG
2	EXON 2	43,509,621	43,509,783	-	-	163	ATCCCACGGGTTCCTCTCCTATAGTGTCATCCCAGCTGGCTTAAGAGCTTGGACGATCAC TATAGCTCTGTCACCTTCAAGGTGTCCTCAGACAGCAGAAAACCTCATCTTTTTGAAGAG TGCTACAATTTTTCCAGTCACCTCTTGTAACTGCGTGCCAAAG
	INTRON 2 - 3	43,509,784	43,533,551			23,768	GTAAGCCTATACATTTCTGCATAGA..........GCATCTTTAAATGTTTTGCTGGCAG
3	EXON 3	43,533,552	43,533,793	-	1	242	AAGGACTCCATGAAAGATGACAGAAGAAGTCATTGTCATAGCCAAGTGGGACTACACTGC CCAGCAGGACCAGGAGCTCGACATCAGGAAGAACGAGCGGTTGTGGCTGCTAGATGACTC CAAGACGTGGTGGCGGGTGAGGAATGCGGCCAACAGGACAGGCTACGTGCCTTCCAACTA TGTGGAGCGTAAGAACAGCCTGAAGAAGGGCTCCCTGGTGAAGAACCTCAAGGACACACT AG
	INTRON 3 - 4	43,533,794	43,553,860			20,067	GTGAGTGTCCATACCCACAGGAACA..........TGAACCATTTGCCATGTCTTCACAG
4	EXON 4	43,553,861	43,554,582	1	0	722	GCCTCGGAAAGACGCGCAGGAAGCCAAGCGCTCGGGATGCTTCCCCAACGCCAAGCACTG ATGCGGAGTACCCAGCCAATGGCAGCGGTGCTGACCGTATCTATGACCTCAACATCCCAG CCTTTGTCAAGTTCGCCTACGTAGCAGAACGAGAGGATGAGCTGTCCCTGGTGAAGGGCT CCCGTGTCACAGTTATGGAGAAATGCAGTGATGGCTGGTGGCGTGGCAGCTTCAATGGGC AGATCGGCTGGTTCCCCTCCAACTACGTTCTGGAGGAAGCAGACGAAGCTGCGGCTGAGG CCCCCAGCTTCCTGAGCCTACGTCGGGGCACTGCACTGAGCAATGGGCAGGGTGCACGGG TGCTGCACGTGGTGCAGACGCTGTACCCCTTCAGCTCGGTCACTGAGGAGGAGCTTAGTT TCGAGAAGGGGGAGACCATGGAGGTGATTGAGAAGCCGGAGAATGACCCTGAATGGTGGA AATGCAAAAATGCCCGAGGCCAAGTGGGCCTGGTCCCCAAAAACTACGTGGTTGTTCTCA GTGATGGGCCTGCACTGCACCCCGCGCACACCCCCCAGATCAGCTACACCGGGCCTTCAG CCAGCGGGCGCTTTGCTGGTCGGGAGTGGTACTATGGCAACGTGACACGGCACCAGGCCG AGTGTGCGCTCAATGAGCGGGGCGTCGAGGGCGACTTCCTCATTAGGGACAGCGAGTCCT CG
	INTRON 4 - 5	43,554,583	43,569,147			14,565	GTAAGTGCCCAGCAGCTCCTGTGCT..........TAACTCCCTTCTGCTTCCTCCTCAG
5	EXON 5	43,569,148	43,570,515	0	-	1,368	CCCAGTGACTTCTCCGTGTCTCTCAAAGCGTCAGGGAGAAACAAGCACTTCAAGGTGCAG CTGGTGGACAGCGTCTACTGCATTGGGCAGCGGCGGTTCCACAGCATGGACGAGCTTGTG GAGCACTACAAGAAGGCCCCCATCTTCACCAGCGAGCACGGGGAGAAGCTCTACCTTGTC CGAGCCCTACAGTGAAAGCAGCCATTGGCCCCCTCATGCCCTGCCCACTGTGGGCCTCGC TGCCACCTCTGCCTCCCAGAGCCCAGCACTTCTGGCCACCTCCACCCATGTGGCCTGGAT CACCTCTGTGGCCCAGTCTGTCCTTCTTTTCAGCCCTGTTGGTCAACCACGGCTACCTAG GCCCTCACAACCATGCCCCAGGCCACCACCTTCTGGTGATGAGGGTCAGAGGGAGCAAAG CTACTCACTTCTTTCCTTTCCAGCTGGAAACAGCCTGTTTGAATCCTTACACACACATAC ACAGAGAGGGAAGGGGGGTGCAGAGAGAGAGACTGACTAAAAGACTGGAGCTGCTTCAGA GGGTCGCGAGGCTGTATGTAGTGAATATGTGACCTTGGCACACACTCCGAGAGCTGTGTC CCTGGGTGTTTGGTGCCTCTCGTCAGCATGCTGGTCCAGACCGGCAGCCTGTGTCCTGGG CCTGCTTTGCTTTGCTTTCTTTCTTTCTTTTTCTTTTTTTTTTTTTTCAATTTTATTTTT TAATTTTATTTTATTTTGGCTCCAGGCACTGCAGGAGTCCAAAACTGTGCGGATAGCAAT ACTGGAAACCCTGGGGAGATGGTGGTGAGAAAACTGCCCAGTGCCTTTGAGGCTGTACTT GCAATAAAAGAGGGTTTTGGTAAGAGTTGGTCTGCAAAAGAGGAAGGTGGCAACACAGAA AGAAAGGTACTCTGGTGATGTCCCCCAGGTGTGCCATCCACATCGTGCTTTTGCCCTTGG GCTTGTTTGAATTTCACAATTATGTATTTAATTCTCAAAGTAATATGTATCTGTAGCTGG TTGTTGACACTAATAACATGATTAAGGAAAACAGCTGATCTCTTGGGAAGGGGAGCTACC AATACTTTATACATACACTATATATATATATATAATATGTGTATATTATATATATATTAT TTGCTTTACAGGGAAATTTTTCAGGGTTTACAAAAGAATATGTGATTAGTAGTAACAGAA TGTTTATGAAGAAATTGCATTTTCATTTTTCTTTACATTTGAACTTCTTTATAGTTTGAC TATAGAGTCTTGAGATGGCACATTCCTACAATTGAAGAAGGGGTCTTGGGATCCCCTAAA CTTGCATACCCGGTTTTTTGAATATTGTAATAAAAAAAAGTATTATGA
	3' upstream sequence						CAAGGCTGTGTGTTTGTGTTTTGGGAGAGCTGACTCTCTTCTGGGGAAGAAACAGCCATA AGAGTCATGGGAAATTCCCCTCCAAAGGAAGATGACGTGCTGGATCCTGTGCCTGCTGTT AACCCAGCATGAGAACCCGAGTTCGGATACTTGGCACCCACAGAAAATTGGGCATTGGTC GTGTCTAATCCTAGCACTGAACACATCCCCAGGCCTGCTGCTGAGGCATTCGAATCAGTC CATGTGCACTGGGCTCAAAAGAACGATAGTAAGAGTGAAAGACACTTGGCCTCTGGATGC ACATGAACGGGTGCACATTCACACATCACAGGCACATAAATGAGAGCTCTCAGAGGACCT TAGCACACTGATTTCTCTACACCTTTTTGTCTTGTAGTATGTATAAGGCAGGGGCTTGTT GTTTGTGGAAGTCACGGAAGTTGGTTCTCCACTTTTATGTGGGATCTAGGGATCAAACCC TGGTCATCGGGCTTACAAAGCAAGCCCTTTGCTTGCTGAGCCATCTCAGCAGCCCCTGCT GTCCACATTCTGGGTTGAAATACTCAGCCTTGGGTAGCAGAACACCAAGAGAACCCAATA CATCAAACTAGAGTTTGCTCTTTGGAAATGAGTGGTTTAAAAGTCGATAGTTAAGCCAGA GTCCTCTGGCTGTCTCCAAAAACCTTGTGGTGTCACTCAGTGTTGACTGTTCAGTTATTT ACCTTCCCAAATGCAGGAATGTGTCCTATGTGCTGGCTTCCTGTCATGCGTTACAGCTTT GAGAGGTAGCCCCGCTGACATACCCATTTAAAAGACAAAGGCTTAAAATCAGTTTGCTGG CTACTCTGGATGAACAGGAACACTGATACAGGACTGTGCCTTAGCCCCAAATTGAACAAC TTGAAAGTGGCTGATCCCTGAGGTTGGCTCCCCTGATTATAGGGAACCGGCCTCCATTCA GGGAGTGACACAGGTCATTTTCCTAGACATCTGTTCTCTT..........

Sequence Detail Report

Gene Symbol (Gene ID)	Nck2 (ENSMUSG00000066877)
Transcript ID	ENSMUST00000086421

		SNP Information
Strain :
Sequence Retrieve :
Exon translate : CDS Start ( 1 ) - End ( 381 ) -
Strand :	forward reverse
Show sequence :	nucleotide amino acid
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