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Target CDS Information

Gene Symbol (Gene ID) Prune2 (ENSMUSG00000039126)
Cross Reference
CCDS CCDS50400.1
EMBL AC126674, AC128703, AC147026, ...show all
Fantom A230083H22, A330102H22, E230026L02, ...show all
GO GO:0003674, GO:0005737, GO:0006915, ...show all
goslim_goa GO:0003674, GO:0005575, GO:0005622, ...show all
MGI_trans_name Prune2-201
protein_id AAH94224.1, AAH95978.1, BAB32192.1, ...show all
RefSeq_mRNA NM_181348.4
RefSeq_peptide NP_851993
RefSeq_peptide_predicted XP_006527207.1, XP_006527208.1, XP_006527209.1, ...show all
UCSC uc008gxg.2
UniParc UPI0001AAB3F1
Uniprot/SWISSPROT Q52KR3
Definition protein_id:ENSMUSP00000084977
translation:
MEEFLQRAKSKLDRSKQLEQVHAVIGPKSCDLDSLISAFTYAYFLDKVSPPGVLCLPVLN
IPRTEFNYFTETRFILEELNIPESFHIFRDEINLHQLNDEGKLSITLVGSHVLGSEDRTL
ESAVVRVINPGEQSDGELGFPETSSSLVLKELLREAPELITQQLAHLLRGSILFTWMSMD
PELPEKQEEILSILEEQFPNLPPRDDIINVLQESQLSAQGLSLEQTMLKDLKELSDGEIK
VAISTVNMTLEDYLLHGNITSDLKAFTDKFGFDVLILISSFTWEEQQRQQIAVYSQNLEL
CSQICCELEESQNPCLELEPFECGCDEILVYQQEDPSVTSDQVFLLLKEVINRRCAEMVS
NSRTSSTEAVAGSAPLSQGSSGIMELYGSDIEPQPSSVNFIENPPELNDSNQAQADGNID
LVSPDSGLATIRSSRSSKESSVFLSDDSPVGDGGAPHHSLLPGFDSYSPIPEGIVAEEHA
HSGEHSEHFDLFNFDSAPIASEQSQPSSHSADYSPEDDFPNSDSSEGNLSAGPKGLGEMG
INMSNYSSSSLLSEAGKDSLVEFDEEFIQRQESSGDNSERNLSLTCFAGEEPSSPERLKN
PGKMIPPTPMNSFVEISPSNEEPTPLYPEDIIQNAIDTGHLGPPQARARCRSWWGGLEID
SKNVVDTWNASEQESVFQSPEPWKDPKPEPVERRTSDSTFQPKSLEFSKSDPWESEFGQP
ELGNKEAQDQKEESLQYQHLPTVRPHLTDASPHGTNHLIEDFAALWHSGHSPTTMPEPWG
NPTDAGEAAVTMSFPTWGAFDKEEDNADTLKNTWNLHPTNNETPSGQEPSEWAMGQSGFS
FPAADLLDNPLIEVNKDAAPEIWGKNNSSKDTSLTSGSPTSDLGQTWNNSKLPGEDQNGL
VDPKATGKVYEKEGSWSLFEESAKKRGADVLAPWEDSFLSYKCSDYSASNIGEDSVPSPL
DTNYSTSDSYTSPTYAGDEKEIANKPVDKDNGFEAKDAEFPAEGLEVLATSSQQSQRNRI
GSGPGNLDMWALPHTEDKPEGNDAHHPDSDALKTEHAEDKNASMEDDVRESSPSSYDDPS
MMRLYEANRQLTLLHSNTNSRQAAPDSLDTWNRVTLEDTQSTATISDMDNDLDWDDCSGG
VAISGDGQAEGYIAANSEPETRFSVKQLEPWGTEHQEANQVDWDLSASAEPTGDPGPSEY
QTLNEKTGQLIANSIWDSVMGDKNMPSFRLPSPPNTVDMEHGTWPSESPRHSNGKDSHML
EASRLSESGGLTSQPVNQDTWGDSQGDTASSVTGLASPEHFAQSDPWTGHTYGQSESEIE
GLVASDCEHLDKEAALGSGVNGAPWAFGKKPRDQEFSSSDAFEHQDISSASGKISSLSVT
SSPQSEEPGEALEVEKEPFILDSLAVQTETFTWDLQSKDTHEESLVDHRNLGEANTTLDR
INPMKNRPLSGMELEKTEACTILKPERANGKLLYESSQDFGVWDGPMDSDVWDSHISYET
AMNSTGQRTEERSLEALSPGNYDRDSLSSGCTHSSASSPDLHDSSVALSSWTYGPSAEHQ
KENHDDANKQIHQESELFTTEAHVDVITEMKDFVENREDGFGKMSNQEDPQFPEIPNDPF
NSGPSSSSSSLGADKYSEYSHAYQEGDLTTKRQEENELGFLEIVEPEGTRIISTSSGSGN
DSGGDEELLEKELHLATVAQSEAGACTSLHEPAFSATEHSKPEFSVFVGSLESIEKENKS
SPFSDSQQSSPGQWILSPLMQADTQDTCKEETRAAETGTMDTTWHGSASTEAKNGDPDKL
EMLGFSADSTEWWNAGAQEGRANAGMSAEELSNSEGELEPTSPVFQNAGPWSLPIQNDSE
PVDTGSTNPFRGKLKSPVLDSHGDKSQEKLWNIQPKQLDSDANQLSQLVILDQMKDKDSG
QQTAMSPAAGDLPAETLTQGQGRESMLSVWDRAEPALTHRDENGCVSTGVSPTECQQENQ
WEPEKPYLSHVTHSSTPTENALESNAPTQLMRKLDSDWNSPSPSEPQHNFVPDILHGNFE
EGGQLASASPDLWMDVKQPFSFKVDSENPDILTHCDHDSNSQASSSPDVCHDSEGEQKME
KHTAVYLGLEVEPSEFSLTEPNMNDEPTWEPEQESLPHNSELHSEHAMPLPPIDSQNDIN
NSSKPASSRSSPEPSDMRGDNNTSVTSMEEDTNPEVEAVDSVTIPGHFPRSEDADTFEAH
QEVSVEVDDSWVSKDLCPESQTGTRALLDCEQPFASESPAVLTDIFLTSDTCLDVSEAAL
DHSFSDASGLNTSTGTIDDMSKLTLSEGHPETPVDGDAGKQDVCSSEASWGDFEYDAMGQ
NIDEELMREPEHFLYGGDLPSEESALKQSLTPYTPPFDLSYLTEPTGCTETAQGAESPGD
ESLGSDAAEMLLSALPDHREEDKAETNIRKPRYQMTVLHIHEDPEALSSPVGGTGSNNES
SPSNIDWEIETDNSDSPAGGDMKPPNGKEILELEEDEKVIPTKGPKQTELEYKEEKQPEQ
SEDHQVLAVDYILVSHEKDSPLKPEAREARENIPELEQLSIGSRETGLPETQLSGTPDTC
QSEFLNDVKVHSAERMSSSSNHESASLENPAQDQSWMVLSHSEVGDPPTETRDSGPESPG
RTPEPFLSLSLDKGPKSQVLERNKPLNSLALEEVAGLSSQSRNIERQGQAGLDAVPTQAA
THDNEWEMLSPQLSRKNRNPPQEMEEETQCPEPGPRKPRLKGPPSEDEGMDIHFEEGVLS
PSAADMRPEPPNSLDLNGSHPRRIKLTAPNINLSLDQSEGSILSDDNLDSPDEIDINVDE
LDTPDEADSFEYTNHEDPTANKSSGQESESIPEYTAEEEREDNRLWRTVVIGEQEQRIDM
KVIEPYRRVISHGGYYGDGLNAIIVFAACFLPDSSRADYHYVMENLFLYVISTLELMVAE
DYMIVYLNGATPRRKMPGLGWMKKCYQMIDRRLRKNLKSFIIVHPSWFIRTILAVTRPFI
SSKFSSKIKYVTSLSELSGLIPMDCIHIPESIIKYDEEKSFKRSVRLDEELREASEAAKT
SCLYNDPEMSSMEKDIDMKLKEKP

Chromosome 19
Length
Position(start - end)
264,556
16,956,257 - 17,220,814
Orient to Chromosome plus
Link Location : (19:16956257-17220814)
/

Detail Map


 

Report

Polymorphisms Report

Target Strain  MSMv4  JF1v3  KJRv1  SWNv1  CHDv1  NJLv1  BLG2v1  HMIv1  BFMv1  PGN2v1
Gene Symbol (Gene ID) Prune2 (ENSMUSG00000039126)
Transcript ID ENSMUST00000087689
Reports
substitution
cSNPs70
Insertion215
Deletion253
SNPs
-1kb
5'UTR
CDS
3'UTR
INTRON
+1kb
Insertions
-1kb
5'UTR
CDS
3'UTR
INTRON
+1kb
Deletions
-1kb
5'UTR
CDS
3'UTR
INTRON
+1kb
coding sequence substitutions
premature termination by the nucleotide substitution0
synonymous num40
non-synonymous num30
synonymous substitutions 17003774 (p.Asn98Asn), 17006643 (p.Ser122Ser), 17006673 (p.Glu132Glu), 17016302 (p.Leu201Leu), 17113634 (p.Thr267Thr), 17113712 (p.Val293Val), 17113742 (p.Gln303Gln), 17118135 (p.Glu334Glu), 17118561 (p.Ala476Ala), 17118777 (p.Ser548Ser), 17118897 (p.Ala588Ala), 17119737 (p.Ser868Ser), 17119761 (p.Ser876Ser), 17120097 (p.Asp988Asp), 17120448 (p.Pro1105Pro), 17120490 (p.Thr1119Thr), 17120511 (p.Ser1126Ser), 17120937 (p.Ser1268Ser), 17120949 (p.Thr1272Thr), 17121012 (p.Thr1293Thr), 17121729 (p.Thr1532Thr), 17122002 (p.Gly1623Gly), 17122503 (p.Thr1790Thr), 17122551 (p.Ser1806Ser), 17122665 (p.Val1844Val), 17122767 (p.Val1878Val), 17122923 (p.Gly1930Gly), 17123208 (p.Glu2025Glu), 17123358 (p.Cys2075Cys), 17123469 (p.Glu2112Glu), 17124040 (p.Leu2303Leu), 17125092 (p.Lys2538Lys), 17125143 (p.Glu2555Glu), 17125359 (p.Pro2627Pro), 17178980 (p.Tyr2832Tyr), 17201675 (p.Val2983Val), 17201703 (p.Leu2993Leu), 17201708 (p.Ala2994Ala), 17208234 (p.Ser3002Ser), 17208267 (p.Ser3013Ser),
non-synonymous substitutions 17006704 (p.Thr143Ser), 17113659 (p.Ile276Val), 17118377 (p.Ala415Val), 17118575 (p.His481Arg), 17119069 (p.Ala646Thr), 17120122 (p.Asp997His), 17121175 (p.Gly1348Arg), 17121316 (p.Glu1395Lys), 17121833 (p.Ala1567Val), 17122031 (p.Ala1633Val), 17122042 (p.Ser1637Pro), 17122079 (p.Thr1649Met), 17122085 (p.Lys1651Arg), 17122088 (p.Arg1652His), 17122325 (p.Leu1731Ser), 17122441 (p.Glu1770Lys), 17122463 (p.Thr1777Met), 17122500 (p.Ser1789Arg), 17122627 (p.Ser1832Pro), 17122765 (p.Val1878Ile), 17122861 (p.Ile1910Val), 17123509 (p.Glu2126Lys), 17123666 (p.Arg2178His), 17124430 (p.Tyr2433His), 17125222 (p.Ser2582Pro), 17125229 (p.Phe2584Ser), 17125285 (p.Glu2603Lys), 17125363 (p.Thr2629Ala), 17125697 (p.Leu2740Pro), 17168268 (p.Pro2744Leu),
B6 transcript
(ENSMUST00000087689)
MEEFLQRAKSKLDRSKQLEQVHAVIGPKSCDLDSLISAFTYAYFLDKVSPPGVLCLPVLN
IPRTEFNYFTETRFILEELNIPESFHIFRDEINLHQLNDEGKLSITLVGSHVLGSEDRTL
ESAVVRVINPGEQSDGELGFPETSSSLVLKELLREAPELITQQLAHLLRGSILFTWMSMD
PELPEKQEEILSILEEQFPNLPPRDDIINVLQESQLSAQGLSLEQTMLKDLKELSDGEIK
VAISTVNMTLEDYLLHGNITSDLKAFTDKFGFDVLILISSFTWEEQQRQQIAVYSQNLEL
CSQICCELEESQNPCLELEPFECGCDEILVYQQEDPSVTSDQVFLLLKEVINRRCAEMVS
NSRTSSTEAVAGSAPLSQGSSGIMELYGSDIEPQPSSVNFIENPPELNDSNQAQADGNID
LVSPDSGLATIRSSRSSKESSVFLSDDSPVGDGGAPHHSLLPGFDSYSPIPEGIVAEEHA
HSGEHSEHFDLFNFDSAPIASEQSQPSSHSADYSPEDDFPNSDSSEGNLSAGPKGLGEMG
INMSNYSSSSLLSEAGKDSLVEFDEEFIQRQESSGDNSERNLSLTCFAGEEPSSPERLKN
PGKMIPPTPMNSFVEISPSNEEPTPLYPEDIIQNAIDTGHLGPPQARARCRSWWGGLEID
SKNVVDTWNASEQESVFQSPEPWKDPKPEPVERRTSDSTFQPKSLEFSKSDPWESEFGQP
ELGNKEAQDQKEESLQYQHLPTVRPHLTDASPHGTNHLIEDFAALWHSGHSPTTMPEPWG
NPTDAGEAAVTMSFPTWGAFDKEEDNADTLKNTWNLHPTNNETPSGQEPSEWAMGQSGFS
FPAADLLDNPLIEVNKDAAPEIWGKNNSSKDTSLTSGSPTSDLGQTWNNSKLPGEDQNGL
VDPKATGKVYEKEGSWSLFEESAKKRGADVLAPWEDSFLSYKCSDYSASNIGEDSVPSPL
DTNYSTSDSYTSPTYAGDEKEIANKPVDKDNGFEAKDAEFPAEGLEVLATSSQQSQRNRI
GSGPGNLDMWALPHTEDKPEGNDAHHPDSDALKTEHAEDKNASMEDDVRESSPSSYDDPS
MMRLYEANRQLTLLHSNTNSRQAAPDSLDTWNRVTLEDTQSTATISDMDNDLDWDDCSGG
VAISGDGQAEGYIAANSEPETRFSVKQLEPWGTEHQEANQVDWDLSASAEPTGDPGPSEY
QTLNEKTGQLIANSIWDSVMGDKNMPSFRLPSPPNTVDMEHGTWPSESPRHSNGKDSHML
EASRLSESGGLTSQPVNQDTWGDSQGDTASSVTGLASPEHFAQSDPWTGHTYGQSESEIE
GLVASDCEHLDKEAALGSGVNGAPWAFGKKPRDQEFSSSDAFEHQDISSASGKISSLSVT
SSPQSEEPGEALEVEKEPFILDSLAVQTETFTWDLQSKDTHEESLVDHRNLGEANTTLDR
INPMKNRPLSGMELEKTEACTILKPERANGKLLYESSQDFGVWDGPMDSDVWDSHISYET
AMNSTGQRTEERSLEALSPGNYDRDSLSSGCTHSSASSPDLHDSSVALSSWTYGPSAEHQ
KENHDDANKQIHQESELFTTEAHVDVITEMKDFVENREDGFGKMSNQEDPQFPEIPNDPF
NSGPSSSSSSLGADKYSEYSHAYQEGDLTTKRQEENELGFLEIVEPEGTRIISTSSGSGN
DSGGDEELLEKELHLATVAQSEAGACTSLHEPAFSATEHSKPEFSVFVGSLESIEKENKS
SPFSDSQQSSPGQWILSPLMQADTQDTCKEETRAAETGTMDTTWHGSASTEAKNGDPDKL
EMLGFSADSTEWWNAGAQEGRANAGMSAEELSNSEGELEPTSPVFQNAGPWSLPIQNDSE
PVDTGSTNPFRGKLKSPVLDSHGDKSQEKLWNIQPKQLDSDANQLSQLVILDQMKDKDSG
QQTAMSPAAGDLPAETLTQGQGRESMLSVWDRAEPALTHRDENGCVSTGVSPTECQQENQ
WEPEKPYLSHVTHSSTPTENALESNAPTQLMRKLDSDWNSPSPSEPQHNFVPDILHGNFE
EGGQLASASPDLWMDVKQPFSFKVDSENPDILTHCDHDSNSQASSSPDVCHDSEGEQKME
KHTAVYLGLEVEPSEFSLTEPNMNDEPTWEPEQESLPHNSELHSEHAMPLPPIDSQNDIN
NSSKPASSRSSPEPSDMRGDNNTSVTSMEEDTNPEVEAVDSVTIPGHFPRSEDADTFEAH
QEVSVEVDDSWVSKDLCPESQTGTRALLDCEQPFASESPAVLTDIFLTSDTCLDVSEAAL
DHSFSDASGLNTSTGTIDDMSKLTLSEGHPETPVDGDAGKQDVCSSEASWGDFEYDAMGQ
NIDEELMREPEHFLYGGDLPSEESALKQSLTPYTPPFDLSYLTEPTGCTETAQGAESPGD
ESLGSDAAEMLLSALPDHREEDKAETNIRKPRYQMTVLHIHEDPEALSSPVGGTGSNNES
SPSNIDWEIETDNSDSPAGGDMKPPNGKEILELEEDEKVIPTKGPKQTELEYKEEKQPEQ
SEDHQVLAVDYILVSHEKDSPLKPEAREARENIPELEQLSIGSRETGLPETQLSGTPDTC
QSEFLNDVKVHSAERMSSSSNHESASLENPAQDQSWMVLSHSEVGDPPTETRDSGPESPG
RTPEPFLSLSLDKGPKSQVLERNKPLNSLALEEVAGLSSQSRNIERQGQAGLDAVPTQAA
THDNEWEMLSPQLSRKNRNPPQEMEEETQCPEPGPRKPRLKGPPSEDEGMDIHFEEGVLS
PSAADMRPEPPNSLDLNGSHPRRIKLTAPNINLSLDQSEGSILSDDNLDSPDEIDINVDE
LDTPDEADSFEYTNHEDPTANKSSGQESESIPEYTAEEEREDNRLWRTVVIGEQEQRIDM
KVIEPYRRVISHGGYYGDGLNAIIVFAACFLPDSSRADYHYVMENLFLYVISTLELMVAE
DYMIVYLNGATPRRKMPGLGWMKKCYQMIDRRLRKNLKSFIIVHPSWFIRTILAVTRPFI
SSKFSSKIKYVTSLSELSGLIPMDCIHIPESIIKYDEEKSFKRSVRLDEELREASEAAKT
SCLYNDPEMSSMEKDIDMKLKEKP*
MSMv4 transcript
MEEFLQRAKSKLDRSKQLEQVHAVIGPKSCDLDSLISAFTYAYFLDKVSPPGVLCLPVLN
IPRTEFNYFTETRFILEELNIPESFHIFRDEINLHQLNDEGKLSITLVGSHVLGSEDRTL
ESAVVRVINPGEQSDGELGFPESSSSLVLKELLREAPELITQQLAHLLRGSILFTWMSMD
PELPEKQEEILSILEEQFPNLPPRDDIINVLQESQLSAQGLSLEQTMLKDLKELSDGEIK
VAISTVNMTLEDYLLHGNITSDLKAFTDKFGFDVLVLISSFTWEEQQRQQIAVYSQNLEL
CSQICCELEESQNPCLELEPFECGCDEILVYQQEDPSVTSDQVFLLLKEVINRRCAEMVS
NSRTSSTEAVAGSAPLSQGSSGIMELYGSDIEPQPSSVNFIENPPELNDSNQAQVDGNID
LVSPDSGLATIRSSRSSKESSVFLSDDSPVGDGGAPHHSLLPGFDSYSPIPEGIVAEEHA
RSGEHSEHFDLFNFDSAPIASEQSQPSSHSADYSPEDDFPNSDSSEGNLSAGPKGLGEMG
INMSNYSSSSLLSEAGKDSLVEFDEEFIQRQESSGDNSERNLSLTCFAGEEPSSPERLKN
PGKMIPPTPMNSFVEISPSNEEPTPLYPEDIIQNAIDTGHLGPPQTRARCRSWWGGLEID
SKNVVDTWNASEQESVFQSPEPWKDPKPEPVERRTSDSTFQPKSLEFSKSDPWESEFGQP
ELGNKEAQDQKEESLQYQHLPTVRPHLTDASPHGTNHLIEDFAALWHSGHSPTTMPEPWG
NPTDAGEAAVTMSFPTWGAFDKEEDNADTLKNTWNLHPTNNETPSGQEPSEWAMGQSGFS
FPAADLLDNPLIEVNKDAAPEIWGKNNSSKDTSLTSGSPTSDLGQTWNNSKLPGEDQNGL
VDPKATGKVYEKEGSWSLFEESAKKRGADVLAPWEDSFLSYKCSDYSASNIGEDSVPSPL
DTNYSTSDSYTSPTYAGDEKEIANKPVDKDNGFEAKHAEFPAEGLEVLATSSQQSQRNRI
GSGPGNLDMWALPHTEDKPEGNDAHHPDSDALKTEHAEDKNASMEDDVRESSPSSYDDPS
MMRLYEANRQLTLLHSNTNSRQAAPDSLDTWNRVTLEDTQSTATISDMDNDLDWDDCSGG
VAISGDGQAEGYIAANSEPETRFSVKQLEPWGTEHQEANQVDWDLSASAEPTGDPGPSEY
QTLNEKTGQLIANSIWDSVMGDKNMPSFRLPSPPNTVDMEHGTWPSESPRHSNGKDSHML
EASRLSESGGLTSQPVNQDTWGDSQGDTASSVTGLASPEHFAQSDPWTGHTYGQSESEIE
GLVASDCEHLDKEAALGSGVNGAPWAFRKKPRDQEFSSSDAFEHQDISSASGKISSLSVT
SSPQSEEPGEALEVKKEPFILDSLAVQTETFTWDLQSKDTHEESLVDHRNLGEANTTLDR
INPMKNRPLSGMELEKTEACTILKPERANGKLLYESSQDFGVWDGPMDSDVWDSHISYET
AMNSTGQRTEERSLEALSPGNYDRDSLSSGCTHSSASSPDLHDSSVALSSWTYGPSAEHQ
KENHDDVNKQIHQESELFTTEAHVDVITEMKDFVENREDGFGKMSNQEDPQFPEIPNDPF
NSGPSSSSSSLGVDKYPEYSHAYQEGDLMTRHQEENELGFLEIVEPEGTRIISTSSGSGN
DSGGDEELLEKELHLATVAQSEAGACTSLHEPAFSATEHSKPEFSVFVGSSESIEKENKS
SPFSDSQQSSPGQWILSPLMQADTQDTCKKETRAAEMGTMDTTWHGSARTEAKNGDPDKL
EMLGFSADSTEWWNAGAQEGRANAGMSAEELPNSEGELEPTSPVFQNAGPWSLPIQNDSE
PVDTGSTNPFRGKLKSPILDSHGDKSQEKLWNIQPKQLDSDANQLSQLVVLDQMKDKDSG
QQTAMSPAAGDLPAETLTQGQGRESMLSVWDRAEPALTHRDENGCVSTGVSPTECQQENQ
WEPEKPYLSHVTHSSTPTENALESNAPTQLMRKLDSDWNSPSPSEPQHNFVPDILHGNFE
EGGQLASASPDLWMDVKQPFSFKVDSENPDILTHCDHDSNSQASSSPDVCHDSEGEQKME
KHTAVYLGLEVEPSEFSLTEPNMNDKPTWEPEQESLPHNSELHSEHAMPLPPIDSQNDIN
NSSKPASSRSSPEPSDMHGDNNTSVTSMEEDTNPEVEAVDSVTIPGHFPRSEDADTFEAH
QEVSVEVDDSWVSKDLCPESQTGTRALLDCEQPFASESPAVLTDIFLTSDTCLDVSEAAL
DHSFSDASGLNTSTGTIDDMSKLTLSEGHPETPVDGDAGKQDVCSSEASWGDFEYDAMGQ
NIDEELMREPEHFLYGGDLPSEESALKQSLTPYTPPFDLSYLTEPTGCTETAQGAESPGD
ESLGSDAAEMLLSALPDHREEDKAETNIRKPRHQMTVLHIHEDPEALSSPVGGTGSNNES
SPSNIDWEIETDNSDSPAGGDMKPPNGKEILELEEDEKVIPTKGPKQTELEYKEEKQPEQ
SEDHQVLAVDYILVSHEKDSPLKPEAREARENIPELEQLSIGSRETGLPETQLSGTPDTC
QPESLNDVKVHSAERMSSSSNHKSASLENPAQDQSWMVLSHSEVGDPPAETRDSGPESPG
RTPEPFLSLSLDKGPKSQVLERNKPLNSLALEEVAGLSSQSRNIERQGQAGLDAVPTQAA
THDNEWEMLSPQLSRKNRNPPQEMEEETQCPEPGPRKPRPKGPLSEDEGMDIHFEEGVLS
PSAADMRPEPPNSLDLNGSHPRRIKLTAPNINLSLDQSEGSILSDDNLDSPDEIDINVDE
LDTPDEADSFEYTNHEDPTANKSSGQESESIPEYTAEEEREDNRLWRTVVIGEQEQRIDM
KVIEPYRRVISHGGYYGDGLNAIIVFAACFLPDSSRADYHYVMENLFLYVISTLELMVAE
DYMIVYLNGATPRRKMPGLGWMKKCYQMIDRRLRKNLKSFIIVHPSWFIRTILAVTRPFI
SSKFSSKIKYVTSLSELSGLIPMDCIHIPESIIKYDEEKSFKRSVRLDEELREASEAAKT
SCLYNDPEMSSMEKDIDMKLKEKP*
homology99.03 (3085 / 3085)

Exon Detail Report

Target Strain  MSMv4  JF1v3  KJRv1  SWNv1  CHDv1  NJLv1  BLG2v1  HMIv1  BFMv1  PGN2v1
Gene Symbol (Gene ID) Prune2 (ENSMUSG00000039126)
Transcript ID ENSMUST00000087689
No. Exon / Intron Start End Start Phase End Phase Length Sequence
5' upstream sequence
..........CCTAAGTAAGAGTAACAAAAGTACACAGACCTCCCTGGTATAGAATACGC
TCATAGCTGCAGATGTAGATGCTTGCTGCCGTGCTTCTTAAATGTGAGTGTACATAGACA
TATCTGAGAATGGTGTAGAAACTGACACATGTTTAGTGGGTGGGGCCCAAGAGTACATTT
CTAATCAGCTCAGCGATGCTCACGATGCTGGTCTGTGAAACTGCCGTCTTGTGCTGCCCA
GCTTTCCCTGAACATACATATCCAGAGTATACAGAGGCTGCCTGAGAACATAGCTATCCA
TTAGCCGCAGGGCCGACGCAAAGGCATCTAATCTACTTTGTGCTGAGCTGCGGATGTCGG
TTGCTAGATGGGTATGCTTGTAGGGTAGGGAGAAAAGTTGCAGCCTACACAACCTCCCAG
CCAGCTCTTCTGGTTAATAGCCATCAAGGTCGCATGCTTTTAGCTCAGCAATATTGCCCT
CCCTTGGTTGATCCCTCCCTCTCTCCCTCCCAGCTCCAGCCACTCTCCCTGAGTGCATTC
TGGGCCAGGGCAACAGACCAGCTCATTAAGTGACCACTGGGGCACTCAGTACAGTGCCAG
CCAGCCAGAGAGGCGCTGGCCGAGGACAAGGCCTCCTCCTGGGGCCAGTGCCCCTCTTCC
CACCTTTCCTTGCTGGCTGCTGGCTGCCTTGAGGCCTGCAGCAGTGTCACTGCAGCAGAC
CCTGCCTGGCACTTGGCATGCACTTCTGGGCGCTGTCCATGGTTGCAGCATCTTTCAGCG
CACCGCGTCAGGAGGCCACCGCGGGGCTCTGCGATTGGCCAAGGAGCCCCTCGCCACCCC
CACCAGCTGCCCCGCGTCAGGGCCCCCGAGGCGCGCGCGTGCCAGCAGGCTGGTGGCGGT
CCCTGGGCTCCCGGGCGGCACACCCACTTTCCTTATTAGGACAGAGTCGGAGCTGGAGCT
GCCGCGGGGCGTGGGCTGGGCAAGCTGCCCAGAGGAAGCAAGGAGGGCTC
1 EXON 1 16,956,118 16,956,292 - 0 175
AGTCCGGGCCGGCCCGCCTAGGGAGCGGCTGGTCCCTGCGCAAAGCGACCACTTTCTGGA
GATCCCGCTCAAGTCCACCGCAGCTCTCCTCTCTCGGCGCTCTCCATCCGGACCCCTGGT
CCCAGTCCCTAGCAGAGACATGGAAGAATTTTTGCAACGCGCCAAATCTAAACTG
INTRON 1 - 2 16,956,293 16,999,938 43,646
GTAAATTGAAGCTGCAGGGGTGCGT..........TGATTTTTCTCTTTATTGGTTGCAG
2 EXON 2 16,999,939 17,000,043 0 0 105
GATCGAAGTAAACAATTGGAACAGGTCCACGCAGTTATTGGACCTAAGTCATGTGACCTG
GATTCTCTCATTTCTGCCTTCACATATGCATACTTTCTGGACAAG
INTRON 2 - 3 17,000,044 17,003,621 3,578
GTGAGGGGGAAGGGACTATATCCTT..........TTGAGGTAACTTCTTCTTTCTGTAG
3 EXON 3 17,003,622 17,003,824 0 2 203
GTCAGTCCTCCCGGGGTCCTCTGCTTGCCAGTGCTGAATATCCCAAGAACTGAATTCAAC
TACTTCACAGAGACAAGGTTTATTTTAGAAGAGCTGAACATCCCTGAATCATTCCACATA
TTCCGAGATGAGATTAACCTGCATCAGCTGAATGATGAAGGGAAACTGTCGATAACGCTC
GTGGGCAGCCACGTCCTGGGGAG
INTRON 3 - 4 17,003,825 17,006,621 2,797
GTAAGACTCACTGTGAGGTTCTGGG..........TTCTTCCTTTCCGTTTATTTTCCAG
4 EXON 4 17,006,622 17,006,785 2 1 164
TGAGGACAGAACTTTGGAATCCGCAGTTGTCAGAGTCATTAACCCCGGAGAACAGAGTGA
TGGTGAGCTGGGGTTCCCGGAGTCTTCCTCCTCTCTGGTGCTGAAGGAGCTCCTGCGTGA
GGCTCCAGAACTCATCACCCAGCAGCTGGCACATCTCCTCAGAG
INTRON 4 - 5 17,006,786 17,016,207 9,422
GTGAGGACGGCGCTGCCAGAGTAAA..........GAGTTCTTGTCTATGTGCCTTCCAG
5 EXON 5 17,016,208 17,016,357 1 1 150
GCAGCATCCTGTTCACGTGGATGAGTATGGATCCTGAGCTCCCGGAGAAGCAGGAGGAAA
TCCTCTCCATCCTGGAAGAACAGTTTCCCAACCTGCCTCCGAGGGATGATATCATCAACG
TGCTGCAAGAGAGTCAGCTCAGTGCTCAGG
INTRON 5 - 6 17,016,358 17,020,558 4,201
GTGAGTGACTGTCCCTGTCGCTCAC..........ATTTTTTTCCTCTTGTTATCCACAG
6 EXON 6 17,020,559 17,020,653 1 0 95
GTTTAAGTCTTGAACAAACAATGCTGAAAGATCTAAAGGAGCTGTCAGACGGTGAAATAA
AAGTGGCCATCAGCACCGTGAACATGACCCTGGAG
INTRON 6 - 7 17,020,654 17,113,586 92,933
GTAAGGGCAGGGTGCTTTTCCAGCC..........TAATCTCTTGTGTCTGTTGTTTCAG
7 EXON 7 17,113,587 17,113,742 0 0 156
GACTACCTGCTTCACGGCAACATCACCAGTGATTTAAAAGCCTTCACGGACAAGTTCGGC
TTTGACGTCCTCGTTCTGATCTCAAGCTTCACATGGGAGGAACAGCAGAGGCAGCAGATC
GCCGTATACTCCCAGAACCTGGAACTGTGCAGCCAA
INTRON 7 - 8 17,113,743 17,118,042 4,300
GTGAGTTGTCCTCTCACCCCTTTCA..........CATGAATCCTTGTGCTCCCCCACAG
8 EXON 8 17,118,043 17,124,592 0 1 6,550
ATTTGCTGTGAGCTAGAAGAAAGTCAGAACCCTTGCCTGGAACTGGAGCCCTTCGAATGT
GGCTGTGATGAGATCCTGGTATACCAGCAGGAGGACCCTTCTGTGACCTCCGACCAGGTG
TTTCTTCTTCTTAAGGAAGTCATCAATAGGAGGTGTGCAGAGATGGTCTCTAACAGTCGG
ACATCCTCAACAGAAGCCGTGGCAGGCAGCGCCCCGCTGTCCCAGGGCTCTTCCGGGATT
ATGGAATTGTATGGATCTGACATAGAGCCACAGCCCAGCTCTGTGAATTTCATAGAAAAC
CCCCCAGAGCTCAACGATTCTAACCAAGCTCAGGTGGATGGCAACATAGACCTGGTTAGC
CCTGACAGTGGGTTGGCCACCATCAGAAGCAGTCGCTCGTCCAAGGAAAGCTCCGTCTTC
CTCAGTGACGACAGCCCCGTGGGAGACGGTGGTGCGCCTCACCATAGCCTTCTCCCAGGA
TTTGACTCCTACAGCCCCATTCCTGAAGGGATAGTTGCAGAGGAGCATGCTCGCTCCGGG
GAACACAGTGAACACTTTGACCTCTTCAACTTTGATTCAGCGCCCATAGCTTCAGAGCAG
TCCCAGCCGTCTTCCCACTCTGCAGACTACTCGCCAGAAGACGACTTCCCCAACAGCGAT
TCATCAGAAGGGAACCTCTCTGCCGGGCCTAAGGGGCTTGGTGAGATGGGGATCAACATG
TCCAATTACTCCTCCAGTTCTCTTTTGTCAGAGGCTGGTAAAGACAGCCTTGTGGAATTT
GATGAAGAGTTTATCCAGCGACAAGAAAGCTCAGGGGATAACTCTGAAAGAAATTTAAGC
CTGACATGTTTTGCAGGAGAGGAGCCTTCTTCCCCTGAAAGGCTGAAGAATCCTGGAAAG
ATGATCCCACCAACACCTATGAACAGCTTTGTGGAAATCTCACCATCAAATGAGGAGCCA
ACTCCACTCTATCCTGAAGATATAATCCAAAATGCAATTGACACCGGACATCTGGGCCCA
CCTCAGACCCGTGCACGGTGCAGAAGCTGGTGGGGTGGCTTGGAGATTGACTCTAAAAAC
GTTGTAGATACATGGAACGCCAGTGAACAAGAATCTGTCTTCCAGAGCCCTGAACCATGG
AAAGATCCTAAGCCTGAGCCAGTTGAGAGGAGAACCTCAGATTCCACATTCCAACCAAAG
AGTCTTGAATTCTCAAAGTCAGATCCTTGGGAATCTGAGTTTGGACAGCCTGAACTGGGC
AACAAAGAAGCCCAGGACCAGAAGGAGGAAAGCTTGCAATACCAGCACTTGCCTACAGTA
AGGCCACATTTGACAGATGCCTCTCCTCATGGGACAAACCACTTGATAGAGGACTTTGCT
GCTTTGTGGCATTCAGGACACTCACCAACAACAATGCCTGAGCCCTGGGGAAACCCCACC
GATGCTGGTGAAGCTGCAGTTACGATGTCCTTCCCCACCTGGGGTGCATTTGATAAAGAA
GAAGATAATGCTGACACATTAAAGAATACTTGGAATCTCCATCCCACTAACAACGAGACA
CCTTCAGGGCAGGAACCAAGTGAATGGGCTATGGGCCAAAGTGGGTTTTCATTCCCTGCA
GCAGACCTACTTGACAATCCCCTCATTGAGGTAAATAAAGATGCAGCTCCAGAAATCTGG
GGCAAGAACAACAGTTCCAAGGATACCAGTCTTACGTCCGGAAGTCCCACTTCAGATCTG
GGTCAAACGTGGAATAATTCTAAGCTACCAGGGGAAGACCAGAATGGCTTGGTGGATCCT
AAAGCTACAGGGAAGGTATATGAGAAGGAAGGGTCCTGGAGCCTCTTTGAGGAGAGTGCT
AAGAAAAGAGGGGCTGATGTTTTAGCTCCTTGGGAAGATTCCTTCTTGTCCTATAAATGT
TCTGATTACAGTGCATCCAACATAGGAGAAGATTCAGTCCCATCTCCATTAGACACCAAC
TACTCCACCTCTGACTCTTACACATCACCAACATATGCTGGGGATGAAAAAGAAATAGCA
AACAAGCCAGTTGATAAAGATAATGGTTTTGAGGCAAAACATGCTGAATTTCCTGCAGAG
GGGCTTGAGGTTCTTGCAACATCATCACAGCAGTCTCAGAGAAATCGAATTGGTTCTGGT
CCTGGGAATCTAGACATGTGGGCATTGCCTCACACAGAAGATAAGCCTGAAGGAAATGAC
GCACATCACCCAGATAGCGATGCGCTCAAGACGGAGCACGCAGAAGACAAAAATGCTTCC
ATGGAGGATGACGTGAGGGAAAGCAGCCCGTCCAGTTACGATGACCCTAGCATGATGCGA
CTGTACGAGGCAAACCGGCAGCTCACCCTTCTACACAGCAACACCAACTCACGCCAGGCA
GCCCCGGACAGCCTTGACACATGGAACCGAGTGACTCTGGAGGACACACAGTCCACTGCA
ACGATCTCAGACATGGATAATGACTTGGATTGGGATGACTGCAGTGGGGGCGTGGCGATC
AGTGGGGATGGTCAAGCAGAAGGTTACATAGCTGCAAACAGTGAACCTGAAACCCGGTTC
TCAGTGAAGCAGCTGGAACCATGGGGTACAGAACATCAGGAAGCAAATCAGGTAGACTGG
GATCTCTCTGCCTCTGCTGAGCCCACAGGGGATCCTGGTCCCAGTGAATACCAGACCCTA
AATGAGAAAACTGGGCAGTTAATTGCAAACAGTATTTGGGATTCTGTCATGGGAGATAAA
AATATGCCATCATTCAGATTACCTAGCCCACCAAATACTGTAGATATGGAACACGGCACT
TGGCCTTCTGAAAGTCCCAGGCACTCAAATGGTAAGGACAGCCACATGTTAGAAGCCTCT
AGACTCAGTGAGTCAGGAGGGCTTACATCTCAACCTGTCAACCAGGACACGTGGGGAGAC
TCCCAAGGTGACACAGCATCCTCGGTGACTGGACTGGCAAGTCCAGAACACTTTGCACAG
TCAGATCCATGGACAGGCCATACTTATGGGCAGAGTGAAAGTGAGATTGAAGGCCTGGTG
GCCTCTGATTGTGAGCATCTTGACAAGGAGGCAGCGCTAGGCTCTGGAGTGAATGGTGCC
CCGTGGGCTTTTAGAAAAAAGCCCAGGGACCAGGAATTCTCTTCTTCAGATGCATTTGAA
CACCAAGACATCTCCAGTGCATCAGGCAAAATCAGCTCTCTTTCAGTCACCTCCAGTCCT
CAGAGTGAGGAACCAGGGGAGGCCTTAGAAGTCAAGAAGGAGCCTTTCATTCTAGACTCC
CTTGCTGTGCAAACAGAGACATTCACATGGGATTTGCAAAGCAAAGACACCCATGAAGAA
TCTCTAGTGGATCATAGAAATTTAGGTGAAGCCAACACAACATTGGATAGGATTAATCCA
ATGAAAAACAGGCCCTTATCTGGAATGGAACTTGAGAAAACTGAAGCCTGTACCATTCTG
AAGCCAGAAAGAGCAAATGGAAAACTACTTTATGAATCTTCTCAAGACTTTGGTGTTTGG
GATGGCCCGATGGATAGTGATGTGTGGGATAGTCATATAAGTTATGAGACAGCTATGAAT
TCTACAGGTCAGAGAACTGAGGAAAGATCTCTAGAAGCCCTTTCACCAGGAAACTATGAC
AGAGACAGCCTCTCTAGTGGGTGTACACATTCCAGTGCATCAAGTCCTGACCTACATGAT
TCCTCAGTAGCCTTGTCCTCCTGGACTTACGGACCCAGTGCTGAACATCAGAAAGAGAAT
CATGATGATGTGAACAAACAGATTCACCAAGAATCAGAACTATTTACCACCGAAGCCCAT
GTAGATGTCATTACTGAAATGAAGGACTTTGTAGAAAACAGGGAGGATGGCTTTGGAAAG
ATGTCCAATCAGGAAGATCCTCAATTCCCAGAGATTCCAAATGATCCCTTCAACAGTGGC
CCCTCATCCTCTTCATCCAGCCTTGGAGTAGATAAATATCCAGAATATTCTCATGCATAT
CAGGAAGGGGATCTAATGACTAGACATCAAGAGGAAAATGAACTTGGTTTTCTGGAAATT
GTGGAGCCAGAGGGTACCAGGATCATATCCACAAGCTCAGGTTCTGGCAATGACAGTGGG
GGTGACGAAGAGTTGCTAGAGAAGGAGCTCCATTTGGCCACAGTTGCTCAGAGTGAAGCT
GGGGCTTGCACTTCATTGCATGAACCTGCGTTCTCGGCCACAGAGCATTCCAAGCCTGAG
TTTTCTGTCTTTGTGGGTAGTTCGGAGTCAATAGAGAAAGAGAACAAGTCAAGCCCGTTC
AGTGACAGTCAACAGAGCAGCCCTGGTCAGTGGATTTTGTCACCACTCATGCAGGCTGAC
ACACAGGACACATGTAAGAAGGAGACCAGAGCTGCAGAAATGGGGACAATGGATACCACG
TGGCATGGATCTGCCAGGACTGAAGCTAAGAATGGGGACCCTGACAAATTGGAAATGCTT
GGCTTCTCGGCTGACAGCACTGAGTGGTGGAACGCTGGGGCACAGGAAGGGAGAGCAAAC
GCCGGTATGTCTGCAGAGGAGTTGCCTAACTCAGAGGGTGAGCTAGAGCCTACTTCTCCA
GTATTCCAGAACGCTGGTCCGTGGAGCTTACCCATTCAGAATGATAGTGAACCTGTGGAC
ACAGGCAGCACCAATCCTTTCCGTGGTAAACTAAAGTCACCCATTCTAGATAGTCATGGA
GACAAGTCACAGGAGAAACTTTGGAACATTCAACCTAAGCAGCTGGATTCAGATGCCAAT
CAACTCAGCCAGCTTGTGGTCCTGGACCAAATGAAGGACAAAGATTCTGGACAGCAAACA
GCCATGTCTCCTGCTGCTGGCGATCTTCCTGCAGAAACTCTCACCCAAGGGCAGGGCCGG
GAATCTATGCTGTCTGTCTGGGACCGTGCAGAACCAGCATTAACTCACAGAGATGAAAAT
GGATGTGTTAGCACTGGGGTTTCACCCACTGAGTGCCAACAAGAGAACCAGTGGGAACCA
GAAAAACCCTATCTCAGCCACGTGACACATTCAAGCACTCCCACAGAAAATGCCCTCGAG
AGCAATGCCCCCACACAACTGATGAGGAAGCTGGACTCTGATTGGAATAGCCCCAGCCCC
AGCGAGCCCCAACATAACTTTGTTCCAGATATTTTACATGGCAACTTCGAAGAGGGTGGG
CAGCTGGCCTCGGCGTCACCTGATTTGTGGATGGATGTCAAGCAACCCTTCAGTTTTAAA
GTAGATAGCGAGAATCCTGATATATTGACTCACTGCGACCATGACAGCAACTCTCAGGCA
TCCAGCAGCCCTGACGTGTGCCACGATTCTGAAGGGGAGCAAAAGATGGAGAAGCATACT
GCTGTTTACCTGGGACTTGAAGTGGAGCCCAGTGAGTTTTCTCTCACCGAGCCAAACATG
AATGATAAACCAACTTGGGAACCTGAGCAGGAAAGTCTCCCACACAATTCAGAACTCCAT
TCCGAACACGCAATGCCCTTGCCTCCAATCGACAGTCAGAATGATATAAATAACTCATCT
AAGCCTGCCTCTTCAAGAAGTTCCCCAGAACCCTCTGATATGCACGGAGACAACAACACA
AGTGTAACATCGATGGAAGAAGACACCAACCCAGAGGTAGAAGCAGTGGACAGCGTGACG
ATCCCAGGTCACTTCCCCAGAAGTGAAGACGCTGACACTTTTGAAGCTCACCAAGAGGTC
AGTGTGGAAGTCGACGACTCTTGGGTGTCAAAAGACCTTTGTCCTGAAAGTCAGACAGGC
ACTAGAGCTCTGCTTGACTGTGAGCAACCGTTTGCTTCCGAGAGCCCTGCTGTACTTACG
GACATCTTCCTAACCTCAGACACCTGCCTGGATGTAAGCGAAGCTGCCTTGGATCACAGT
TTCAGTGATGCCTCCGGCCTCAACACTTCCACAGGCACTATAGACGACATGAGTAAGTTG
ACTCTATCGGAAGGCCATCCCGAAACACCAGTTGACGGGGATGCAGGGAAGCAAGATGTC
TGTTCATCTGAAGCTTCCTGGGGTGATTTTGAATATGATGCAATGGGTCAGAATATTGAC
GAAGAGCTGATGAGAGAGCCTGAACACTTCCTCTATGGTGGTGATCTTCCGTCAGAGGAA
AGCGCGCTGAAGCAATCACTGACACCATACACACCCCCCTTTGATTTGTCCTATCTCACG
GAACCTACTGGATGCACTGAAACTGCACAGGGAGCTGAGTCTCCAGGTGATGAATCTCTG
GGAAGTGACGCGGCAGAGATGTTGCTTTCTGCTCTTCCAGATCACAGGGAGGAAGACAAG
GCTGAGACCAACATCAGGAAACCTAGACACCAGATGACTGTGTTGCATATTCATGAAGAC
CCTGAGGCTCTTTCATCACCTGTGGGAGGAACAGGTTCCAATAATGAGTCATCTCCATCA
AACATTGACTGGGAAATAGAAACAGATAATTCAGATTCACCAGCAGGTGGCGACATGAAA
CCACCAAACG
INTRON 8 - 9 17,124,593 17,124,937 345
GTAAGCAACCCATTACACTCCAGCA..........TTTCTTTCCCACCTTCATATTCTAG
9 EXON 9 17,124,938 17,125,703 1 2 766
GCAAGGAGATACTGGAGTTAGAAGAAGATGAGAAAGTAATTCCCACGAAAGGGCCAAAGC
AAACAGAATTAGAATACAAAGAAGAAAAACAGCCAGAGCAAAGTGAAGACCATCAGGTAC
TAGCTGTGGACTACATCCTTGTAAGCCATGAAAAGGATTCACCATTGAAACCAGAGGCCA
GGGAAGCAAGAGAAAACATACCCGAGTTGGAACAATTATCCATAGGTTCCAGAGAAACAG
GGCTACCAGAGACTCAGTTATCAGGCACCCCAGACACATGTCAGCCTGAGTCTTTAAATG
ATGTCAAAGTTCATTCTGCAGAGAGAATGTCTTCGTCTTCCAACCACAAGAGTGCATCTC
TTGAAAACCCTGCACAAGACCAGAGTTGGATGGTCTTGAGCCATAGTGAGGTTGGTGACC
CACCTGCAGAAACCAGGGACTCGGGGCCTGAGTCTCCTGGTAGAACTCCGGAGCCGTTCT
TGAGTCTCAGTTTGGACAAGGGCCCCAAGTCCCAGGTTCTGGAAAGAAATAAGCCTCTAA
ATTCTTTAGCACTAGAGGAAGTTGCTGGTTTGAGCAGCCAATCAAGGAACATCGAGAGAC
AAGGTCAAGCTGGTCTAGATGCAGTTCCAACCCAGGCGGCCACCCACGACAATGAATGGG
AAATGCTTTCGCCACAGCTCTCCCGGAAAAACAGGAACCCTCCACAGGAAATGGAAGAAG
AGACACAGTGCCCTGAGCCTGGACCCAGAAAGCCAAGACCGAAAGG
INTRON 9 - 10 17,125,704 17,168,262 42,559
GTAAGCAAAACACTAGATTTATTTT..........TGCTCTTCTTCTTGCTTCTTTTCAG
10 EXON 10 17,168,263 17,168,342 2 1 80
ACCCCTGTCAGAGGATGAAGGAATGGATATCCACTTCGAGGAGGGAGTGCTGAGTCCCAG
TGCCGCAGACATGAGGCCCG
INTRON 10 - 11 17,168,343 17,178,789 10,447
GTGAGAGAAACCTCTGCTCATTTTA..........ATGTTGTTATGGTTTCTTCCTTTAG
11 EXON 11 17,178,790 17,178,990 1 1 201
AACCTCCCAATTCTCTGGATCTCAATGGCAGTCACCCTAGAAGAATCAAGCTCACAGCCC
CAAATATCAACCTCTCTCTGGACCAAAGTGAAGGATCTATTCTCTCTGATGATAACCTAG
ACAGTCCGGATGAGATTGACATCAATGTGGATGAACTCGATACCCCTGATGAAGCAGACT
CTTTTGAATACACTAACCATG
INTRON 11 - 12 17,178,991 17,193,255 14,265
GTAAGTTTCCTAGATAGTGAGGCCG..........GTCCTGCTCTGTGCTTCACTTCCAG
12 EXON 12 17,193,256 17,193,429 1 1 174
AAGATCCCACGGCCAACAAAAGCTCTGGTCAAGAGTCAGAGTCTATTCCAGAATATACGG
CTGAAGAGGAGCGAGAAGACAACCGGCTGTGGAGGACGGTGGTCATCGGGGAGCAGGAGC
AACGGATTGACATGAAGGTCATTGAACCCTACAGGAGAGTCATTTCTCACGGAG
INTRON 12 - 13 17,193,430 17,199,112 5,683
GTACTCAATCTGTTCGAGTCCAGGA..........CACATATCTTCTCATTTGTCCCCAG
13 EXON 13 17,199,113 17,199,215 1 2 103
GATACTATGGGGACGGTCTGAATGCCATCATTGTGTTTGCTGCCTGCTTTCTGCCAGACA
GCAGCCGGGCGGATTACCACTATGTCATGGAAAACCTTTTCCT
INTRON 13 - 14 17,199,216 17,199,780 565
GTGAGTGGTGATTGGGTTGACCTCC..........ACATTCTCTTCCTTCCTGCGATCAG
14 EXON 14 17,199,781 17,199,912 2 2 132
ATATGTAATAAGTACCTTAGAGCTGATGGTTGCTGAAGACTACATGATCGTGTACTTAAA
TGGTGCAACCCCAAGGCGGAAGATGCCAGGACTAGGTTGGATGAAGAAATGCTACCAGAT
GATTGACAGACG
INTRON 14 - 15 17,199,913 17,201,641 1,729
GTACGTAGCTGCAGCCATTTAATCA..........AGAATTGTTTCTTTTTTCAAAATAG
15 EXON 15 17,201,642 17,201,728 2 2 87
GTTGCGCAAGAATTTGAAGTCATTCATCATTGTCCACCCATCTTGGTTCATCAGGACAAT
CCTAGCGGTGACTCGGCCTTTTATAAG
INTRON 15 - 16 17,201,729 17,208,230 6,502
GTATAACTGTGATAGTCATAAGACG..........TCTCTTCTCCTTTTTCTTCTTCCAG
16 EXON 16 17,208,231 17,208,329 2 2 99
CTCAAAATTCAGCAGTAAAATTAAATATGTGACTAGTTTATCTGAGCTCAGTGGCCTGAT
CCCCATGGACTGCATCCACATTCCAGAGAGCATCATCAA
INTRON 16 - 17 17,208,330 17,211,677 3,348
GTGAGTATGAGGGCTTTGAAGCGCT..........TGGCGTCCGTTTCTTATCTTGTAAG
17 EXON 17 17,211,678 17,211,713 2 2 36
GTATGATGAAGAGAAATCTTTTAAGAGAAGTGTGAG
INTRON 17 - 18 17,211,714 17,212,291 578
GTAAAAATCTGAAGCTCTGTATTCA..........CCATCGATAATTTTTGCTCGTGCAG
18 EXON 18 17,212,292 17,212,330 2 2 39
ACTGGATGAAGAACTGAGGGAGGCATCCGAAGCAGCTAA
INTRON 18 - 19 17,212,331 17,216,325 3,995
GTAAGACTTGGGTTTTCATTTTGCG..........TTTGTTTCTTCTCCCCTGCACTCAG
19 EXON 19 17,216,326 17,216,373 2 2 48
AACTAGCTGCCTTTACAATGATCCAGAAATGTCTTCTATGGAAAAGGA
INTRON 19 - 20 17,216,374 17,220,783 4,410
GTAAGAACTTGCCATCAGTCACAGC..........CCCCACCCCAACCCCCTCAACCCAG
20 EXON 20 17,220,784 17,223,932 2 - 3,149
CATTGACATGAAGCTGAAGGAGAAGCCGTAGCTGGCCTGCTGGAGGAGGACTCCCTTTCT
GCTTGGTGATTTTGCTGGGACGCACCTACCTGGAAGCAACAGGGATGGTGACATCTCCAC
TTTGCACCACCTGGTGCCATTGGAAACTTCCAAGGAAAAGAGAATTTGTTTACTGTTAAC
ATATCCTATGAAATGTTGTGTCTTTTCCTATTTTGCCAATTACGTGCCTCAATGATTTTA
GTTGAACCTTAGCAACTAAACCTTCCGTTTAGTTTTATGGACCTTCCATTTTTACTATTA
TGCTAATCCTCGGTGCAGTGGGACTTGGTTCCTTAGACTGGTTTTTACCAAAAGCGTAGC
CTAGTTCTGCTGTTAGACAGATGTGGATACGTTTCTGTAGACTGACTGAATCCCTACAGA
GCTTCCTTCTATATTCAGGATGCACAGGCCTTGCCTTGTCCCAGGAACATGGCTTTCTGG
AACTCTATGAAATGCTGAGCTTGAATAGGACAGACAGACAGATGTAAAATCCTCATCAGC
TAAGGCATCTGCCCCCTTCCTGTCCACATCTTTCAGTGTTTCAAAAGGACCCGGGCTTTC
TAACCCATGCAAGCTTTACTTTATATATCTGCATGTAAATTGCTCTTTTACAACACCATC
TCCTAGTGAGCTTTGAAGAACTGCATCTTGTGAAACTTAAGACGAGCTATGCTTCAGGCC
ACAGAACAGGCTCCAACCTTTACACTTCATCCAACTCCAAGGTGGCCCACTGAGAAATCA
CTGGGTAACATCGAATCGTCCAAAATTAACACTCAGATGCATTGCAAAAGCAATCTGCTT
GAGGAAATTTAAAATTAAATGCAAGTATATGCTAGCCTTTATGAAATAGCTCATTTCTTG
TTTTTTATATGCTCCTAAATTGTTACGGCAATTTCCAGTCTGTGGATCTCCAGCAGAGGT
TGGCAAGCTGTACCGAGGAGGCTAAGGCTCCAAAGCAAGAGAAGGTGGCTTCCACACTTA
CAGTTGAAAACAAAAATTACCACTTAACTGTCTGAAACTTCTTTTACTCATTCTCCACCA
GAACTGAACAGTGACAACAGACAGTTCTTCACAAAGCCACAACACTATCTTTACAGGAGA
AAAAACAAAGTGTGCTGACCCCTACGAGACCAAATATCCATTCCCTCCCTGGTCTCCCTG
CTCTGTGTGTTTATTTAAATGCTTTCCCCAACTGAGTGCACAGAGGTGGTTGTAATCTCA
TTTGGTTTTGTCAAAAACATTTTTATTTTCTTTCAAGGCACGATCTCACCATGTAGCCCT
AATTGGCCTAGAACTCACTATGTAGACCAAGTCAGCCTCAAACTTGTGGCAATCCGCCTG
CCTTAGCCTCCCAAGTGCAGGTATTGTTATAGGCTCGCACCACCATGTCTGGACTTGTAA
AGAAAATTTCGACATTTACAGACAGTGAAACATCACCTGTGGCCTACTGAGAAAAGTGAT
GGGTCTTTCTCACAAAAGTGTGGCTCTCTTAAAGCATGGGATTGCTAGGCTCAAACTGAA
AATGTCCGAAAACTCTTTAGACTCACTCACTCTTCAAAGTCATCCGTTACCAAGCAGCTG
GCAAGACAGGCCCTGCCTGGTGGCTTTGTAGGAGAGCTGCAGACACTCTGAGCCCTGAGG
AAGTCTCCTCAACAGGGGGGCTTCTTAGCCCAGGTGCCAGAGGTCTTCTGACTTTATCTG
CTTCATGTCTGTTTCCAATCTGTCTTCCGTACAAGCTCACACAATATACGTGAGCCGGTC
GCTTCCCTTCCCTTCATAAAGCTCCATTATTTACTTTCACCTGTTGATCCTGTTCAACTT
AGTTTTTTTTACCTTTGTCTTTTTTTCAATCTCCCTTCTCTCTCTCTCTCTTTTTTTTTT
TTTTTTTTTTTTTTTTTTTTTTTTTTTGCTAATTCGATAGAAAAACCTCAGAATCATCTA
GGCTCCCACAGCCTGCCCTGCCCTTTGGAAGCCCACCTCAAACATCATGGTGATAGGAGT
ATAGTTACCCAATATCCTGATTCGCTCACCTGCTTAACATATTAACTCCTTCATATTCCA
TTCTGGAAGATGAATTTCACATTTCCCCTAGCTATGTTAAACCTATGTCGCTGTGAGAAC
TGCAGAGTTTGGCTCAGCAGATCTGTAGACATGGGACTCTTTTCATAACCAACCAGACAT
GGCAACAGGCAAACAGGCACACCATTCACACTTTCTCTGAGTCTGTGTATGGAAAATGAC
TCACTCGTGTGGCGTGGCAAAGTAAATTTAGTGTGAGCAGTTTCACATCAATGATATTTG
GAAAATCCTATGGGCTGTAATACCATTACAATATTTAAGCACATGCTATCTTACTATCTT
CAAAAAACAAGTTACTTTAATTGCACGTGCTAGAGAAAAGCTATCATGTTCATCAAATGA
ATAGGCTTCTAGGCAATCCTGGGAAAATAGCCCATAAACAAGTAGATGCAACTCTCACAT
CGCTCAGCTGTAGCGCCTGCACCCTGGGCATTCTTGCTTTGGTCTGGACTGCCAGGACCT
GCTTTGCACTTTTTCCTGTAGATTTGTAGTTAAGGGAACACCGAGGGGTCATTGAGGCAG
GAGTGGTGTTCACTCTGAGTTCCAGCTACTACTTAGCTGGATTTTGACTAAGGGTGAAAC
AAAAACCTTCACAGAAGGTAGTTGTTGAAGAGTGAGAACAACTGGGGGCGGAGGAAGACC
CCAAAGTTCCTATTGAAGCCATACAGTGTTATATAAGGTTCCTCCCTAGGGCATACCGAT
GAGCAAAGAGGCCACCCTCCCTAGCACACATCCTTAGGATGTAACTTTGAGAGTCCCTTC
ATGGTTCTGCACAACCCTTGTCTTATCACTATGCCCCAGTGGTCTGCTACTTTAGGAATA
TCTAGGTGTGCACAAACTTAACCTTTTCTATATCTAAAGAGTTTTCTACGTGTATCGGAT
TGCTCAGAATAAAGTATATATTAGACGCGTTTTGGTAAAGAAATAAATTCTATCTGGATA
GTATGGTTTAAAAATATGAAAATATGTTAAGAACACAATGTATTGCTATACCCTTACTGT
GTAATTCAGAAATAAAAATAGATTCCACA
3' upstream sequence
CATTGTGGTTTCCTCTTTCAACTCAGTGAAACTCTCTGTGGCTTCCCTTAGCAGGAACAT
GATATGCTGGCCACTCGCCACAGGCAAAAGCAGTGTGCATTTGACTTGCCTGGCCATCGA
AACCCTATTGTTTTCTGTCTAATTTTACCTTTCATGTCTTGGAGGCTTTTGCACTGTACT
TTTAAAATGGACCATTTACTCTTTGGAAGTGTCCCCTCATTTCATGGTTACTTGATTGTG
ACTTTTTCTGTCACTTGCCTATTCATGACATATTTATTTTTAAAGTAAAGCATACTAAGG
GCTGGGGAAGAGGGGGTAGAGTTCCGTGGTGAAACACGCACTTGGAATGAGCAAGGTTCT
GTGTCTAATCCCCAACAAAACACACACATGTGTGTGAGCACATACATACATACATATGCA
CATACACACACACATACACACCCGTTCACACATGCACACACGTGCACATACATACGCATA
CATGCACATACACACAGGAACATACACACATACACATATGCACATGCACACATGCACACG
TGCGTGCACGCACACACATACACATACACACAGGAGGGTGTCATTTTAACCTCAACTGTC
TTTGTTTCCCTTTTTGTTTTCTGGAGTCTTTCTTGAACTTTCATAGCCTTTAGGCAAAAA
CAGAGTTAGAAACCATCGCTGTAATTGTTTTTAACTAAATAAGACTCACCTGGGGAGCCA
TCCCATTTACAATCACCAAATCCAGACACTGTTGTTGATGCCAACAAGTGCTTGCTGACA
GGAGCCTGGATATAGCTGTCTCCTGAGAGGCTCTGCCAGTGTCTTACAAATACAGAAGTG
GATGCTCACAGCCATCCATTGAACTGAGCATAGGGTTCCCAATGAAGGAGCTAGAGAAAG
TACCCAAGGAGCTGAAGGGGTTTACAACCCCATAGGAGGAACAACAATATGACCTAGCCA
TTACCCCCAGAGCTCCCTGGGACTAAACCACCAACCAAAG..........

Sequence Detail Report

Gene Symbol (Gene ID) Prune2 (ENSMUSG00000039126)
Transcript ID ENSMUST00000087689
SNP Information
Strain :
Sequence Retrieve :
Exon translate :
CDS Start ( 1 ) - End ( 3085 )
-
Strand : forward reverse
Show sequence : nucleotide amino acid
Color information