MoG+ -Mouse Genome database with high added value-

Target CDS Information

Gene Symbol (Gene ID)

Mfsd6 (ENSMUSG00000041439)

Cross Reference

CCDS	CCDS14946.1
EMBL	AB247936, AK035995, AK046866, ...show all
Fantom	9630025I22, B830038L24
GO	GO:0002250, GO:0016020, GO:0016021, ...show all
goslim_goa	GO:0002376, GO:0005575, GO:0006810, ...show all
MGI_trans_name	Mfsd6-002
OTTP	OTTMUSP00000045076
OTTT	OTTMUST00000083798
protein_id	AAH17534.1, BAC29272.1, BAC32900.1, ...show all
RefSeq_mRNA	NM_178081.4

RefSeq_peptide	NP_835182
RefSeq_peptide_predicted	XP_006496438.1
UCSC	uc007aym.1
UniParc	UPI00000E94D4
Uniprot/SWISSPROT	Q8CBH5
Vega_transcript	Mfsd6-002, OTTMUST00000083798
Vega_translation	179257, OTTMUSP00000045076

Definition

protein_id:ENSMUSP00000084991
translation:

MAADDKVAILTDDEEEQKRKYVLADPFNGICREPEPPSNETPSSTETSAIPEEEIDWIEK
HCVKVNNDLLISKVFYFFFYSAYGSLYPLLPVYYKQLGMSPSQSGLLVGIRYFIEFCSAP
FWGVVADRFRKGKIVLLFSLLCWVLFNLGIGFVKPATLRCLPKIPPTAHPTNVSHPVTVL
PMNSSTVAFFSTPPKLLQKRDVQLSETEPNISDIDLVSTALTLTSEPTRRPQTEAITHPV
TGLILNTSTVTLPPTGNVTRETTIAVVTTTKSLPSDQVTLVYDQQEVEAIFLIILVVVII
GEFFSASSVTIVDTVTLQYLGKHRDRYGLQRMWGSLGWGLAMLSVGIGIDYTHIDVLIDG
KGCKPPEYRNYQIVFIVFGVLMTMALIVATQFRFRYNHFNNSDGKGKEVEIPQVERDNST
ESSEETPTAATHSQAFNFWDLIKLLCSVQYGSVLFVAWFMGFGYGFVFTFLYWHLEDLNG
TTTLFGVCSVLSHVSELTAYFFSHKLIELIGHIRVLYIGLACNTARYIYISYLENAWTVL
PMEVLQGVTHAAIWAACISYLSAAVPPELRTSAQGILQGLHLGLGRGCGAMIGGVLVNYF
GAAATFRGIGMACLVILLLFALIQWLAVPDEEEDKTMLAERIPVPSSPVPIATIDLVQQQ
TEDVMPRVEARLPPKKTKHQEEQEDVNKPAWGVSSSPWVTFVYALYQVKELIQLTRESRA
SEIQPLQVTLCWASVASAPLLPPCSSKHMGNRKTGMLAKDISGLRSLCHSVYQVA

Chromosome

Length
Position(start - end)

49,043
52,660,660 - 52,709,704

Orient to Chromosome

minus

Link

Location : (1:52660660-52709704)
/

Detail Map

name	Mfsd6 (ENSMUSG00000041439)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : Mfsd6 note : major facilitator superfamily domain containing 6 [Source:MGI Symbol;Acc:MGI:1922925]

name	Gm29670 (ENSMUSG00000100302)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : Gm29670 note : predicted gene 29670 [Source:MGI Symbol;Acc:MGI:5580376]

name	Mfsd6 (ENSMUSG00000041439)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000156876

name	Mfsd6 (ENSMUSG00000041439)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000147758

name	Mfsd6 (ENSMUSG00000041439)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000087701

name	Mfsd6 (ENSMUSG00000041439) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS14945.2 RefSeq_peptide:NP_598590 RefSeq_mRNA:NM_133829.2 RefSeq_mRNA_predicted:XM_006496374 RefSeq_peptide_predicted:XP_006496437.1 Vega_transcript:Mfsd6-001 Vega_transcript:OTTMUST00000083797 Uniprot/SPTREMBL:D3Z183 UCSC:uc007ayl.3 EMBL:AC139299 EMBL:AC161876 GO:GO:0016020 GO:GO:0016020 GO:GO:0016021 GO:GO:0055085 MGI_trans_name:Mfsd6-001 Vega_translation:179255 Vega_translation:OTTMUSP00000045075 goslim_goa:GO:0005575 goslim_goa:GO:0006810 goslim_goa:GO:0008150 goslim_goa:GO:0055085 OTTP:OTTMUSP00000045075 OTTT:OTTMUST00000083797 UniParc:UPI0000355D33
definition	note : transcript_id=ENSMUST00000156876 protein_id : ENSMUSP00000122881 translation : MAADDKVAILTDDEEEQKRKYVLADPFNGICREPEPPSNETPSSTETSAIPEEEIDWIEKHCVKVNNDLLISKVFYFFFYSAYGSLYPLLPVYYKQLGMSPSQSGLLVGIRYFIEFCSAPFWGVVADRFRKGKIVLLFSLLCWVLFNLGIGFVKPATLRCLPKIPPTAHPTNVSHPVTVLPMNSSTVAFFSTPPKLLQKRDVQLSETEPNISDIDLVSTALTLTSEPTRRPQTEAITHPVTGLILNTSTVTLPPTGNVTRETTIAVVTTTKSLPSDQVTLVYDQQEVEAIFLIILVVVIIGEFFSASSVTIVDTVTLQYLGKHRDRYGLQRMWGSLGWGLAMLSVGIGIDYTHIDVLIDGKGCKPPEYRNYQIVFIVFGVLMTMALIVATQFRFRYNHFNNSDGKGKEVEIPQVERDNSTESSEETPTAATHSQAFNFWDLIKLLCSVQYGSVLFVAWFMGFGYGFVFTFLYWHLEDLNGTTTLFGVCSVLSHVSELTAYFFSHKLIELIGHIRVLYIGLACNTARYIYISYLENAWTVLPMEVLQGVTHAAIWAACISYLSAAVPPELRTSAQGILQGLHLGLGRGCGAMIGGVLVNYFGAAATFRGIGMACLVILLLFALIQWLAVPDEEEDKTMLAERIPVPSSPVPIATIDLVQQQTEDVMPRVEARLPPKKTKHQEEQEDVNKPAWGVSSSPWVTFVYALYQVKELIQLTRESRASEIQPLQGTSENREASPAGGAQRAPRETHSASPRNQPSPDTAASQTQSSPAHPSATPHGQESGEKQAQPTVGEH

name	Mfsd6 (ENSMUSG00000041439) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:Mfsd6-003 Vega_transcript:OTTMUST00000083799 Uniprot/SPTREMBL:F6U3S2 UCSC:uc007ayl.3 GO:GO:0016020 GO:GO:0016021 GO:GO:0055085 MGI_trans_name:Mfsd6-003 Vega_translation:179256 Vega_translation:OTTMUSP00000045077 goslim_goa:GO:0005575 goslim_goa:GO:0006810 goslim_goa:GO:0008150 goslim_goa:GO:0055085 OTTP:OTTMUSP00000045077 OTTT:OTTMUST00000083799 UniParc:UPI0001889ED5
definition	codon_start : 2 note : transcript_id=ENSMUST00000147758 protein_id : ENSMUSP00000115398 translation : XTNVSHPVTVLPMNSSTVAFFSTPPKLLQKRDVQLSETEPNISDIDLVSTALTLTSEPTRRPQTEAITHPVTGLILNTSTVTLPPTGNVTRETTIAVVTTTKSLPSDQVTLVYDQQEVEAIFLIILVVVIIGEFFSASSVTIVDTVTLQYLGKHRDRYGLQRMWGSLGWGLAMLSVGIGIDYTHIDVLIDGKGCKPPEYRNYQIVFIVFGVLMTMALIVATQFRFRYNHFNNSDGKGKEVEIPQVERDNSTESSEETPTAATHSQAFNFWDLIKLLCSVQYGSVLFVAWFMGFGYGFVFTFLYWHLEDLNGTTTLFGVCSVLSHVSELTAYFFSHKLIELIGHIRVLYIGLACNTARYIYISYLENAWTVLPMEVLQGVTHAAIWAACISYLSAAVPPELRTSAQGILQGLHLGLGRGCGAMIGGVLVNYFGAAATFRGIGMACLVILLLFALIQWLAVPDEEEDKTMLAERIPVPSSPVPIATIDLVQQQTEDVMPRVEARLPPKKTKHQEEQEDVNKPAWGVSSSPWVTFVYALYQVKELIQLTRESRASEIQPLQLHIGKEMKGDQ

name	Mfsd6 (ENSMUSG00000041439) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS14946.1 Uniprot/SWISSPROT:Q8CBH5 RefSeq_peptide:NP_835182 RefSeq_mRNA:NM_178081.4 RefSeq_peptide_predicted:XP_006496438.1 Vega_transcript:Mfsd6-002 Vega_transcript:OTTMUST00000083798 UCSC:uc007aym.1 Fantom:9630025I22 Fantom:B830038L24 EMBL:AB247936 EMBL:AK035995 EMBL:AK046866 EMBL:BC017534 GO:GO:0002250 GO:GO:0016020 GO:GO:0016021 GO:GO:0055085 MGI_trans_name:Mfsd6-002 Vega_translation:179257 Vega_translation:OTTMUSP00000045076 goslim_goa:GO:0002376 goslim_goa:GO:0005575 goslim_goa:GO:0006810 goslim_goa:GO:0008150 goslim_goa:GO:0055085 protein_id:AAH17534.1 protein_id:BAC29272.1 protein_id:BAC32900.1 protein_id:BAF36946.1 OTTP:OTTMUSP00000045076 OTTT:OTTMUST00000083798 UniParc:UPI00000E94D4
definition	note : transcript_id=ENSMUST00000087701 protein_id : ENSMUSP00000084991 translation : MAADDKVAILTDDEEEQKRKYVLADPFNGICREPEPPSNETPSSTETSAIPEEEIDWIEKHCVKVNNDLLISKVFYFFFYSAYGSLYPLLPVYYKQLGMSPSQSGLLVGIRYFIEFCSAPFWGVVADRFRKGKIVLLFSLLCWVLFNLGIGFVKPATLRCLPKIPPTAHPTNVSHPVTVLPMNSSTVAFFSTPPKLLQKRDVQLSETEPNISDIDLVSTALTLTSEPTRRPQTEAITHPVTGLILNTSTVTLPPTGNVTRETTIAVVTTTKSLPSDQVTLVYDQQEVEAIFLIILVVVIIGEFFSASSVTIVDTVTLQYLGKHRDRYGLQRMWGSLGWGLAMLSVGIGIDYTHIDVLIDGKGCKPPEYRNYQIVFIVFGVLMTMALIVATQFRFRYNHFNNSDGKGKEVEIPQVERDNSTESSEETPTAATHSQAFNFWDLIKLLCSVQYGSVLFVAWFMGFGYGFVFTFLYWHLEDLNGTTTLFGVCSVLSHVSELTAYFFSHKLIELIGHIRVLYIGLACNTARYIYISYLENAWTVLPMEVLQGVTHAAIWAACISYLSAAVPPELRTSAQGILQGLHLGLGRGCGAMIGGVLVNYFGAAATFRGIGMACLVILLLFALIQWLAVPDEEEDKTMLAERIPVPSSPVPIATIDLVQQQTEDVMPRVEARLPPKKTKHQEEQEDVNKPAWGVSSSPWVTFVYALYQVKELIQLTRESRASEIQPLQVTLCWASVASAPLLPPCSSKHMGNRKTGMLAKDISGLRSLCHSVYQVA

name
type	misc_feature
link
xref
definition	note : contig AC161876.3 1..165171(-1)

name
type	misc_feature
link
xref
definition	note : contig AC139299.3 138973..204848(1)

name	Mfsd6 (ENSMUSG00000041439)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000121632 Vega_transcript:OTTMUST00000121632 MGI_trans_name:Mfsd6-006 OTTT:OTTMUST00000121632
definition	note : retained_intron note : transcript_id=ENSMUST00000188126

name	Mfsd6 (ENSMUSG00000041439)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000083801 Vega_transcript:OTTMUST00000083801 MGI_trans_name:Mfsd6-005 OTTT:OTTMUST00000083801
definition	note : processed_transcript note : transcript_id=ENSMUST00000149887

name	Mfsd6 (ENSMUSG00000041439)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000083800 Vega_transcript:OTTMUST00000083800 MGI_trans_name:Mfsd6-004 OTTT:OTTMUST00000083800
definition	note : retained_intron note : transcript_id=ENSMUST00000147421

name	Gm29670 (ENSMUSG00000100302)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000121836 Vega_transcript:OTTMUST00000121836 Clone_based_vega_transcript:RP23-335D20.1-001 MGI_trans_name:Gm29670-001 OTTT:OTTMUST00000121836 RNACentral:URS0000765F57
definition	note : sense_intronic note : transcript_id=ENSMUST00000190228

Polymorphisms Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Mfsd6 (ENSMUSG00000041439)
Transcript ID	ENSMUST00000087701

Reports
substitution
cSNPs	8
Insertion	39
Deletion	73
SNPs	+1kb 52727501(c.-17797C>T), 52727615(c.-17911C>T), 52727814(c.-18110T>C), 52727969(c.-18265G>A), 52728067(c.-18363G>A), 52728099(c.-18395T>A), 52728136(c.-18432T>C), 52728176(c.-18472A>T), 52728231(c.-18527G>A), 52728361(c.-18657G>A), 52728645(c.-18941A>C), 52728648(c.-18944T>C), 52728808(c.-19104A>G), 52728823(c.-19119T>G), 52728869(c.-19165C>T), 52728944(c.-19240A>G), 52729141(c.-19437T>C), 52729212(c.-19508T>C), 52729293(c.-19589T>C), 52729542(c.-19838A>G), 52729647(c.-19943G>C), 52729680(c.-19976T>C), 52729943(c.-20239A>G), 52730126(c.-20422A>G), 52730149(c.-20445T>A), 52730680(c.-20976G>A), 52730700(c.-20996C>T), 52730815(c.-21111C>T), 52730819(c.-21115C>G), 52730825(c.-21121C>T), 52730849(c.-21145T>C), 52730850(c.-21146T>C), 52730874(c.-21170G>T), 52730889(c.-21185T>C), 52730938(c.-21234C>T), 52731054(c.-21350C>T), 52731526(c.-21822T>A), 52731887(c.-22183C>T), 52732034(c.-22330C>T), 52732098(c.-22394T>C), 5'UTR 52709707(c.-3G>A), 52709725(c.-21C>T), 52709729(c.-25C>G), 52727208(c.-237G>C), 52727454(c.-483T>C), CDS 52660780(c.2208G>A), 52708313(c.1392C>T), 52708820(c.885A>G), 52708829(c.876A>G), 52709019(c.686G>T), 52709101(c.604G>T), 52709133(c.572G>C), 52709154(c.551C>T), 3'UTR 52660090(c.570A>G), 52660257(c.403T>C), 52660466(c.194G>A), INTRON 52661131(c.1901-44T>G), 52661253(c.1901-166G>A), 52661317(c.1901-230G>A), 52661385(c.1901-298T>A), 52661471(c.1901-384C>G), 52661488(c.1901-401C>T), 52661499(c.1901-412G>T), 52661904(c.1900+486C>T), 52662507(c.1802-19T>C), 52662581(c.1802-93T>G), 52663481(c.1640-35A>G), 52663831(c.1640-385G>A), 52664378(c.1640-932A>G), 52664526(c.1640-1080C>G), 52664557(c.1640-1111G>C), 52664759(c.1640-1313C>G), 52664802(c.1640-1356A>G), 52664839(c.1640-1393T>C), 52665167(c.1640-1721A>G), 52665408(c.1640-1962G>T), 52665456(c.1640-2010A>C), 52665484(c.1640-2038A>T), 52665516(c.1640-2070T>A), 52665518(c.1640-2072T>A), 52665568(c.1640-2122C>T), 52665663(c.1640-2217A>G), 52665787(c.1640-2341C>T), 52665813(c.1640-2367G>A), 52665825(c.1640-2379C>T), 52665849(c.1640-2403A>T), 52665908(c.1640-2462A>G), 52665947(c.1640-2501C>T), 52665949(c.1640-2503T>G), 52665955(c.1640-2509A>G), 52665956(c.1640-2510G>A), 52666124(c.1640-2678T>C), 52666141(c.1640-2695G>A), 52666177(c.1640-2731G>A), 52666248(c.1640-2802C>T), 52666255(c.1640-2809A>T), 52666339(c.1640-2893A>G), 52666344(c.1640-2898C>T), 52666423(c.1640-2977A>G), 52666587(c.1640-3141G>A), 52666617(c.1640-3171T>C), 52666642(c.1640-3196T>C), 52666829(c.1640-3383T>C), 52666961(c.1640-3515A>G), 52667070(c.1640-3624A>G), 52667071(c.1640-3625C>T), 52667139(c.1640-3693C>T), 52667263(c.1640-3817C>T), 52667326(c.1640-3880T>C), 52667336(c.1640-3890A>G), 52667427(c.1640-3981T>C), 52668643(c.1640-5197G>A), 52668655(c.1640-5209G>A), 52668687(c.1640-5241G>A), 52668754(c.1640-5308C>T), 52668755(c.1640-5309A>G), 52668760(c.1640-5314G>A), 52668853(c.1640-5407G>C), 52668867(c.1640-5421A>G), 52668880(c.1640-5434T>C), 52668939(c.1640-5493T>C), 52668940(c.1640-5494T>C), 52668953(c.1640-5507G>C), 52669066(c.1640-5620T>C), 52670003(c.1639+6475C>T), 52670391(c.1639+6087C>A), 52670479(c.1639+5999G>A), 52670645(c.1639+5833T>C), 52670685(c.1639+5793T>A), 52670727(c.1639+5751A>G), 52671548(c.1639+4930A>G), 52671653(c.1639+4825C>A), 52671786(c.1639+4692T>G), 52672254(c.1639+4224C>T), 52672552(c.1639+3926C>T), 52672895(c.1639+3583T>C), 52673010(c.1639+3468T>G), 52673168(c.1639+3310C>T), 52673281(c.1639+3197G>A), 52673484(c.1639+2994C>T), 52673680(c.1639+2798T>C), 52673702(c.1639+2776G>C), 52673722(c.1639+2756A>G), 52673743(c.1639+2735G>A), 52673744(c.1639+2734C>T), 52673787(c.1639+2691C>T), 52673875(c.1639+2603G>A), 52673911(c.1639+2567A>G), 52673912(c.1639+2566C>G), 52673981(c.1639+2497C>A), 52674026(c.1639+2452T>C), 52674036(c.1639+2442G>A), 52674067(c.1639+2411C>T), 52674192(c.1639+2286C>T), 52674203(c.1639+2275A>C), 52674233(c.1639+2245C>T), 52674398(c.1639+2080A>G), 52674412(c.1639+2066C>A), 52674489(c.1639+1989A>T), 52674499(c.1639+1979G>A), 52674656(c.1639+1822G>A), 52674789(c.1639+1689G>A), 52674827(c.1639+1651G>A), 52674863(c.1639+1615C>T), 52674909(c.1639+1569A>G), 52674965(c.1639+1513T>A), 52675012(c.1639+1466C>T), 52675264(c.1639+1214T>A), 52675485(c.1639+993A>T), 52675523(c.1639+955C>T), 52675605(c.1639+873C>G), 52675659(c.1639+819A>G), 52675695(c.1639+783A>G), 52675783(c.1639+695C>T), 52675809(c.1639+669C>T), 52675816(c.1639+662G>A), 52675817(c.1639+661T>C), 52675827(c.1639+651G>A), 52675848(c.1639+630T>C), 52675863(c.1639+615T>C), 52675913(c.1639+565G>T), 52676332(c.1639+146C>T), 52676740(c.1542-165A>T), 52676987(c.1542-412G>A), 52677074(c.1542-499G>A), 52677098(c.1542-523T>C), 52677099(c.1542-524G>A), 52677378(c.1542-803A>T), 52677525(c.1542-950G>A), 52677527(c.1542-952A>G), 52677583(c.1542-1008T>C), 52677611(c.1542-1036A>G), 52677631(c.1542-1056G>A), 52677651(c.1542-1076A>G), 52677652(c.1542-1077C>T), 52677800(c.1542-1225C>T), 52677822(c.1542-1247C>T), 52677983(c.1542-1408C>T), 52678033(c.1542-1458T>G), 52678141(c.1542-1566G>A), 52678185(c.1542-1610T>C), 52678190(c.1542-1615G>A), 52678191(c.1542-1616A>G), 52678192(c.1542-1617T>C), 52678281(c.1542-1706T>C), 52678285(c.1542-1710G>T), 52678315(c.1542-1740T>G), 52678354(c.1542-1779G>A), 52678408(c.1542-1833G>T), 52678409(c.1542-1834G>C), 52678421(c.1542-1846G>C), 52678482(c.1542-1907C>T), 52678519(c.1542-1944G>C), 52678549(c.1542-1974C>T), 52678792(c.1542-2217A>T), 52678882(c.1542-2307C>T), 52679067(c.1542-2492C>A), 52679274(c.1542-2699C>T), 52679553(c.1542-2978G>A), 52679978(c.1542-3403T>C), 52680201(c.1542-3626A>G), 52680290(c.1542-3715G>C), 52680340(c.1542-3765A>C), 52680365(c.1542-3790T>C), 52681157(c.1542-4582C>T), 52681941(c.1542-5366T>C), 52682273(c.1542-5698C>T), 52683384(c.1542-6809G>C), 52683517(c.1542-6942G>A), 52683928(c.1542-7353A>G), 52683982(c.1542-7407A>G), 52684190(c.1542-7615G>A), 52684303(c.1542-7728T>C), 52684341(c.1542-7766A>G), 52684423(c.1542-7848T>C), 52684459(c.1542-7884A>G), 52684530(c.1542-7955T>G), 52684578(c.1542-8003C>G), 52684878(c.1542-8303G>C), 52684911(c.1542-8336A>G), 52684914(c.1542-8339T>C), 52684954(c.1542-8379G>A), 52684963(c.1542-8388A>C), 52685158(c.1542-8583G>A), 52685350(c.1542-8775C>T), 52685485(c.1542-8910G>A), 52685765(c.1542-9190G>T), 52685856(c.1542-9281A>G), 52685857(c.1542-9282T>G), 52685877(c.1542-9302A>T), 52686084(c.1542-9509A>C), 52686120(c.1542-9545T>C), 52686188(c.1542-9613C>T), 52686225(c.1542-9650C>T), 52686236(c.1542-9661A>C), 52686239(c.1542-9664A>G), 52686371(c.1542-9796G>T), 52686386(c.1542-9811T>A), 52686438(c.1542-9863C>T), 52686455(c.1542-9880G>A), 52686488(c.1542-9913T>C), 52686525(c.1542-9950C>A), 52686535(c.1542-9960T>A), 52686536(c.1542-9961T>G), 52686602(c.1542-10027C>T), 52686690(c.1542-10115G>C), 52686708(c.1542-10133C>T), 52686789(c.1542-10214G>A), 52686842(c.1542-10267T>C), 52687106(c.1542-10531G>A), 52687109(c.1542-10534T>C), 52687122(c.1542-10547C>T), 52687129(c.1542-10554G>A), 52687130(c.1542-10555T>C), 52687250(c.1542-10675T>G), 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52708021(c.1541+143A>G), 52709804(c.-51-49T>C), 52709815(c.-51-60C>T), 52710032(c.-51-277G>T), 52710077(c.-51-322A>G), 52710141(c.-51-386G>A), 52710342(c.-51-587A>G), 52710388(c.-51-633T>C), 52710561(c.-51-806T>C), 52710674(c.-51-919T>A), 52710852(c.-51-1097C>T), 52710916(c.-51-1161G>C), 52711002(c.-51-1247T>G), 52711249(c.-51-1494T>C), 52711280(c.-51-1525T>C), 52711322(c.-51-1567G>T), 52711425(c.-51-1670T>G), 52711527(c.-51-1772T>G), 52711684(c.-51-1929C>G), 52711706(c.-51-1951A>G), 52711761(c.-51-2006A>G), 52711823(c.-51-2068C>T), 52711841(c.-51-2086C>T), 52711877(c.-51-2122A>C), 52711945(c.-51-2190G>A), 52712047(c.-51-2292A>G), 52712048(c.-51-2293A>G), 52712069(c.-51-2314G>A), 52712070(c.-51-2315T>A), 52712114(c.-51-2359G>A), 52712138(c.-51-2383G>A), 52712226(c.-51-2471C>G), 52712231(c.-51-2476C>T), 52712263(c.-51-2508A>G), 52712279(c.-51-2524C>T), 52712303(c.-51-2548T>C), 52712432(c.-51-2677C>T), 52712607(c.-51-2852G>T), 52712687(c.-51-2932G>A), 52712778(c.-51-3023C>T), 52712782(c.-51-3027A>G), 52712792(c.-51-3037T>C), 52712886(c.-51-3131T>A), 52712919(c.-51-3164T>G), 52713027(c.-51-3272A>G), 52713029(c.-51-3274G>A), 52713062(c.-51-3307A>G), 52713097(c.-51-3342T>C), 52713237(c.-51-3482G>A), 52713250(c.-51-3495G>C), 52713253(c.-51-3498T>C), 52713261(c.-51-3506G>A), 52713300(c.-51-3545G>A), 52713339(c.-51-3584A>G), 52713489(c.-51-3734C>T), 52713522(c.-51-3767T>A), 52713578(c.-51-3823G>A), 52713637(c.-51-3882A>C), 52713763(c.-51-4008C>A), 52713797(c.-51-4042A>G), 52713864(c.-51-4109G>A), 52713872(c.-51-4117G>A), 52713916(c.-51-4161A>G), 52714128(c.-51-4373G>A), 52714140(c.-51-4385C>T), 52714406(c.-51-4651G>A), 52715029(c.-51-5274T>C), 52715035(c.-51-5280G>A), 52715312(c.-51-5557C>T), 52715419(c.-51-5664T>C), 52715452(c.-51-5697A>G), 52715515(c.-51-5760T>C), 52715534(c.-51-5779C>A), 52715548(c.-51-5793T>A), 52715782(c.-51-6027C>G), 52715818(c.-51-6063G>A), 52715890(c.-51-6135A>T), 52715957(c.-51-6202G>A), 52715961(c.-51-6206T>C), 52716025(c.-51-6270G>T), 52716077(c.-51-6322C>T), 52716084(c.-51-6329G>A), 52716154(c.-51-6399C>T), 52716182(c.-51-6427A>G), 52716226(c.-51-6471T>A), 52716263(c.-51-6508G>A), 52716282(c.-51-6527A>T), 52716309(c.-51-6554A>G), 52716313(c.-51-6558T>A), 52716323(c.-51-6568G>A), 52716341(c.-51-6586G>T), 52716625(c.-51-6870C>T), 52717192(c.-51-7437G>T), 52717211(c.-51-7456G>T), 52717252(c.-51-7497A>G), 52717296(c.-51-7541C>T), 52717324(c.-51-7569T>G), 52717342(c.-51-7587T>G), 52717349(c.-51-7594G>A), 52717364(c.-51-7609C>T), 52717434(c.-51-7679G>A), 52717474(c.-51-7719T>A), 52717604(c.-51-7849A>G), 52717673(c.-51-7918C>T), 52717811(c.-51-8056G>C), 52717820(c.-51-8065A>G), 52717848(c.-51-8093A>C), 52717860(c.-51-8105C>G), 52717993(c.-51-8238T>A), 52717994(c.-51-8239G>C), 52718025(c.-51-8270G>T), 52718027(c.-51-8272G>C), 52718241(c.-51-8486G>T), 52718363(c.-51-8608G>A), 52718404(c.-52+8619C>T), 52718521(c.-52+8502A>G), 52718540(c.-52+8483G>A), 52718588(c.-52+8435C>T), 52718811(c.-52+8212G>A), 52718955(c.-52+8068T>C), 52718957(c.-52+8066C>T), 52719006(c.-52+8017T>C), 52719012(c.-52+8011C>A), 52719119(c.-52+7904A>T), 52719155(c.-52+7868A>G), 52719272(c.-52+7751G>A), 52719315(c.-52+7708T>C), 52719340(c.-52+7683G>T), 52719351(c.-52+7672C>G), 52719353(c.-52+7670G>T), 52719354(c.-52+7669T>C), 52719481(c.-52+7542A>G), 52719537(c.-52+7486C>T), 52719643(c.-52+7380G>A), 52719743(c.-52+7280A>T), 52719923(c.-52+7100T>A), 52720033(c.-52+6990A>G), 52720039(c.-52+6984A>G), 52720049(c.-52+6974A>G), 52720050(c.-52+6973C>T), 52720055(c.-52+6968C>G), 52720057(c.-52+6966A>T), 52720203(c.-52+6820T>G), 52720338(c.-52+6685G>T), 52720493(c.-52+6530T>G), 52720541(c.-52+6482G>A), 52720583(c.-52+6440T>C), 52720836(c.-52+6187A>T), 52720995(c.-52+6028G>A), 52721054(c.-52+5969T>C), 52721218(c.-52+5805G>T), 52721447(c.-52+5576G>T), 52721783(c.-52+5240C>T), 52721864(c.-52+5159C>A), 52721957(c.-52+5066A>T), 52722333(c.-52+4690G>A), 52722390(c.-52+4633C>A), 52722523(c.-52+4500C>T), 52722867(c.-52+4156A>C), 52723065(c.-52+3958T>G), 52723141(c.-52+3882A>G), 52723209(c.-52+3814T>C), 52723383(c.-52+3640G>A), 52723572(c.-52+3451C>T), 52723920(c.-52+3103G>A), 52724105(c.-52+2918G>A), 52724271(c.-52+2752C>T), 52724283(c.-52+2740T>C), 52724344(c.-52+2679G>C), 52724579(c.-52+2444G>A), 52724719(c.-52+2304A>G), 52724721(c.-52+2302G>C), 52724786(c.-52+2237T>C), 52724865(c.-52+2158G>A), 52724886(c.-52+2137G>A), 52725419(c.-52+1604A>C), 52725444(c.-52+1579T>C), 52725448(c.-52+1575C>G), 52725652(c.-52+1371T>A), 52725665(c.-52+1358A>G), 52725667(c.-52+1356A>G), 52725735(c.-52+1288A>G), 52725896(c.-52+1127C>T), 52725941(c.-52+1082T>C), 52726006(c.-52+1017C>T), 52726090(c.-52+933G>A), 52726122(c.-52+901A>G), 52726193(c.-52+830T>G), 52726461(c.-52+562G>A), 52726544(c.-52+479C>T), -1kb 52655212(c.5448G>C), 52655239(c.5421C>T), 52655270(c.5390C>T), 52655283(c.5377G>A), 52656563(c.4097G>A), 52656579(c.4081G>A), 52656587(c.4073C>T), 52656591(c.4069A>G), 52656595(c.4065G>T), 52656647(c.4013T>G), 52657015(c.3645A>G), 52657235(c.3425A>C), 52657582(c.3078C>A), 52657659(c.3001G>A), 52657979(c.2681A>G), 52657984(c.2676G>A), 52658057(c.2603T>G), 52658671(c.1989C>T), 52659489(c.1171A>G), 52659494(c.1166C>T), 52659743(c.917G>A), 52659752(c.908A>T), 52659764(c.896C>A), 52659793(c.867C>T), 52659805(c.855G>A), 52659955(c.*705G>A),
Insertions	+1kb 52728663 (c.-18960_-18959insA), 52728913 (c.-19210_-19209insA), 52728919 (c.-19216_-19215insA), 52729329 (c.-19626_-19625insT), 52729625 (c.-19922_-19921insA), 52730097 (c.-20394_-20393insA), 52730537 (c.-20834_-20833insA), 5'UTR CDS 3'UTR 52660614 (c.45_46insA), 52660651 (c.8_9insGGG), INTRON 52666829 (c.1640-3384dupA), 52667427 (c.1640-3982_1640-3981insGTT), 52668714 (c.1640-5269_1640-5268insA), 52676077 (c.1639+400dupT), 52676607 (c.1542-33_1542-32insTTAACAAC), 52680709 (c.1542-4135_1542-4134insTGTTCA), 52685998 (c.1542-9424dupC), 52686904 (c.1542-10330_1542-10329insGTTTTT), 52687204 (c.1542-10630_1542-10629insT), 52690234 (c.1542-13660dupT), 52690903 (c.1542-14329dupG), 52692451 (c.1541+15712_1541+15713insGGGGG), 52705459 (c.1541+2704dupA), 52707380 (c.1541+783dupA), 52710892 (c.-51-1138_-51-1137insT), 52710899 (c.-51-1145_-51-1144insC), 52711084 (c.-51-1332_-51-1330dupAAA), 52711890 (c.-51-2138_-51-2136dupAAA), 52713735 (c.-51-3981_-51-3980insAGGC), 52713760 (c.-51-4006dupA), 52717611 (c.-51-7857_-51-7856insCT), 52719119 (c.-52+7903_-52+7904insT), 52720842 (c.-52+6180dupA), 52721049 (c.-52+5973dupA), -1kb 52656114 (c.4545_4546insA), 52656185 (c.4474_4475insACCA), 52657506 (c.3153_3154insTATAA), 52658558 (c.2101_2102insT), 52658580 (c.2079dupT), 52658595 (c.2064dupT),
Deletions	+1kb 52728315 (c.-18613_-18612delCC), 52728378 (c.-18675delG), 52728870 (c.-19167delC), 5'UTR CDS 3'UTR INTRON 52661499 (c.1901-413delA), 52664286 (c.1640-844_1640-841delGTGT), 52665880 (c.1640-2435delT), 52665993 (c.1640-2555_1640-2548delGAAGGCTG), 52666439 (c.1640-2994delC), 52666905 (c.1640-3465_1640-3460delAAAACA), 52667353 (c.1640-3908delA), 52667452 (c.1640-4007delT), 52667456 (c.1640-4011delT), 52668486 (c.1640-5042_1640-5041delTG), 52668734 (c.1640-5289delG), 52669032 (c.1640-5588_1640-5587delAG), 52669368 (c.1640-5926_1640-5923delGTTA), 52669633 (c.1640-6188delT), 52669785 (c.1640-6342_1640-6340delCCC), 52669825 (c.1640-6384_1640-6380delTTCTT), 52670152 (c.1639+6325delG), 52672734 (c.1639+3743delC), 52674098 (c.1639+2378_1639+2379delCT), 52674259 (c.1639+2218delA), 52674749 (c.1639+1726_1639+1728delAAA), 52675605 (c.1639+872delA), 52676593 (c.1542-21_1542-19delTTA), 52677021 (c.1542-448_1542-447delAT), 52677901 (c.1542-1327delT), 52678257 (c.1542-1684_1542-1683delTG), 52678724 (c.1542-2150delC), 52682209 (c.1542-5637_1542-5635delTCT), 52683909 (c.1542-7336_1542-7335delTT), 52684755 (c.1542-8181delG), 52685017 (c.1542-8443delT), 52685171 (c.1542-8601_1542-8597delATGGA), 52686797 (c.1542-10224_1542-10223delTT), 52688387 (c.1542-11816_1542-11813delTTTT), 52689201 (c.1542-12628_1542-12627delTT), 52690705 (c.1542-14134_1542-14131delGAAA), 52692302 (c.1542-15728delA), 52692718 (c.1541+15444_1541+15445delGA), 52692883 (c.1541+15277_1541+15280delACAC), 52694199 (c.1541+13964delT), 52699561 (c.1541+8602delT), 52701459 (c.1541+6704delT), 52703802 (c.1541+4360_1541+4361delCT), 52704646 (c.1541+3515_1541+3517delTAA), 52704869 (c.1541+3294delA), 52705403 (c.1541+2760delA), 52705409 (c.1541+2754delA), 52707020 (c.1541+1142_1541+1143delGT), 52707221 (c.1541+939_1541+942delAGTG), 52707654 (c.1541+508_1541+509delAG), 52711465 (c.-51-1716_-51-1711delAACCTG), 52711494 (c.-51-1743_-51-1740delTTAA), 52712334 (c.-51-2583_-51-2580delGAAG), 52715185 (c.-51-5433_-51-5431delAAT), 52715425 (c.-51-5671delT), 52715594 (c.-51-5844_-51-5840delAAAAC), 52716242 (c.-51-6488delT), 52717073 (c.-51-7322_-51-7319delCTAA), 52718032 (c.-51-8286_-51-8278delCATCTCTGT), 52719512 (c.-52+7510delT), 52724199 (c.-52+2821_-52+2823delTTT), 52724710 (c.-52+2309_-52+2312delCAGT), 52724755 (c.-52+2267delA), 52724762 (c.-52+2260delA), 52725801 (c.-52+1221delT), 52726310 (c.-52+711_-52+712delAA), 52726525 (c.-52+496_-52+497delGC), -1kb 52657436 (c.3219_3223delAAGAC), 52658202 (c.2456_2457delAC), 52658325 (c.*2334delC),
coding sequence substitutions
premature termination by the nucleotide substitution	0
synonymous num	4
non-synonymous num	4
synonymous substitutions	52660780 (p.Ala736Ala), 52708313 (p.Tyr464Tyr), 52708820 (p.Leu295Leu), 52708829 (p.Leu292Leu),
non-synonymous substitutions	52709019 (p.Arg229Leu), 52709101 (p.Val202Leu), 52709133 (p.Ser191Thr), 52709154 (p.Ser184Phe),
B6 transcript (ENSMUST00000087701)	MAADDKVAILTDDEEEQKRKYVLADPFNGICREPEPPSNETPSSTETSAIPEEEIDWIEK HCVKVNNDLLISKVFYFFFYSAYGSLYPLLPVYYKQLGMSPSQSGLLVGIRYFIEFCSAP FWGVVADRFRKGKIVLLFSLLCWVLFNLGIGFVKPATLRCLPKIPPTAHPTNVSHPVTVL PMNSSTVAFFSTPPKLLQKRDVQLSETEPNISDIDLVSTALTLTSEPTRRPQTEAITHPV TGLILNTSTVTLPPTGNVTRETTIAVVTTTKSLPSDQVTLVYDQQEVEAIFLIILVVVII GEFFSASSVTIVDTVTLQYLGKHRDRYGLQRMWGSLGWGLAMLSVGIGIDYTHIDVLIDG KGCKPPEYRNYQIVFIVFGVLMTMALIVATQFRFRYNHFNNSDGKGKEVEIPQVERDNST ESSEETPTAATHSQAFNFWDLIKLLCSVQYGSVLFVAWFMGFGYGFVFTFLYWHLEDLNG TTTLFGVCSVLSHVSELTAYFFSHKLIELIGHIRVLYIGLACNTARYIYISYLENAWTVL PMEVLQGVTHAAIWAACISYLSAAVPPELRTSAQGILQGLHLGLGRGCGAMIGGVLVNYF GAAATFRGIGMACLVILLLFALIQWLAVPDEEEDKTMLAERIPVPSSPVPIATIDLVQQQ TEDVMPRVEARLPPKKTKHQEEQEDVNKPAWGVSSSPWVTFVYALYQVKELIQLTRESRA SEIQPLQVTLCWASVASAPLLPPCSSKHMGNRKTGMLAKDISGLRSLCHSVYQVA*
MSMv4 transcript	MAADDKVAILTDDEEEQKRKYVLADPFNGICREPEPPSNETPSSTETSAIPEEEIDWIEK HCVKVNNDLLISKVFYFFFYSAYGSLYPLLPVYYKQLGMSPSQSGLLVGIRYFIEFCSAP FWGVVADRFRKGKIVLLFSLLCWVLFNLGIGFVKPATLRCLPKIPPTAHPTNVSHPVTVL PMNFSTVAFFTTPPKLLQKRDLQLSETEPNISDIDLVSTALTLTSEPTLRPQTEAITHPV TGLILNTSTVTLPPTGNVTRETTIAVVTTTKSLPSDQVTLVYDQQEVEAIFLIILVVVII GEFFSASSVTIVDTVTLQYLGKHRDRYGLQRMWGSLGWGLAMLSVGIGIDYTHIDVLIDG KGCKPPEYRNYQIVFIVFGVLMTMALIVATQFRFRYNHFNNSDGKGKEVEIPQVERDNST ESSEETPTAATHSQAFNFWDLIKLLCSVQYGSVLFVAWFMGFGYGFVFTFLYWHLEDLNG TTTLFGVCSVLSHVSELTAYFFSHKLIELIGHIRVLYIGLACNTARYIYISYLENAWTVL PMEVLQGVTHAAIWAACISYLSAAVPPELRTSAQGILQGLHLGLGRGCGAMIGGVLVNYF GAAATFRGIGMACLVILLLFALIQWLAVPDEEEDKTMLAERIPVPSSPVPIATIDLVQQQ TEDVMPRVEARLPPKKTKHQEEQEDVNKPAWGVSSSPWVTFVYALYQVKELIQLTRESRA SEIQPLQVTLCWASVASAPLLPPCSSKHMGNRKTGMLAKDISGLRSLCHSVYQVA*
homology	99.48 (776 / 776)

Exon Detail Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Mfsd6 (ENSMUSG00000041439)
Transcript ID	ENSMUST00000087701


..........TTTCATGATAGCCCAACTGGGAACTTGAAGAGCTTTTCATTTCCACACAA
TGAGGGATCCAGCTGTCTCCAGGTCACACCAGAGCAGATATGTCATCCTTTATACAAATC
ACCTTTATAATTTTCCTCTGAAACGCTAGCAGATACCGTCTTTGTTTAACTTCCACGTCT
CAACATTTCAAGTGGTCTGTAATAAGGCGTATTGACTGCAGAAACTGTCCCTGGAAACGG
GAGCTGAGCATCCAGCAACTGTATATTTATACTTTTTCATAAAGAAGGGCTTCACATTTT
GAAGCGTCAGGGCCTATAAAGTGCTCTTTAGTAATGCCTTATGATGCAGAGCCTGGATTT
TCTTCTACTTGTTAGTAATTTTGAACCTAGTTAACTTTCAGTCTCATTTTGTAGCTGTAA
CAATAGATTAACATTGCTTACATCTATAGGATTCAATGGTATGTAAACAATGCTTCCCAT
GTAAGAAACGAATGTTCCTAAATATTAGCTGTCATTATTGCTGGCTCTGGATTCTCTGCT
CCCCATCACAGGCACGCACATACCCTTGTCAAACCAAACCTGTATACAATCTACTTGCTA
TCTGAATTTAACAAATGATACAGCTTAATTCTTAGAGTAACACCTGTGCTCAGGTCACCT
CTTCATTAAGGTGCCATGTTCAGATGCTGTCTGGGTTCCAGAAGCTCCTGGAGCGAGCAC
TGTCTTTCTCCTAGCTGTTGTCTGCGGGGTCACCCGAGGACAGTTTACCAAGGTTGTGCC
TAGAACCAGACAGCATGCATCTCATCAGCAGAGTTAGCTTTGAGGGTGGCACCTATTAAG
TTCTGGAAAACTGATGGTTGTCACCACCCCTAGACCAGGTTGTTATTTACTTTGGGCTTC
AAGTTCTTTCCAACACCCCATCAGAGATTAGGGAGTAAAACACCGCTCAGCCCGAGCGCA
ATGGGGTGTGGTGGAACGGGGATGGGGCATCGCCCACCTCTTCACTCTTT
AGAATATGCCACGGCAGCCGGGGCTGGATACCGGGTCCCCCGGGCGGCCCCAGAGGGCGGGAGGCCGAGAGGAGGCGGCGGACGCATCCGCCGCCGCAGGAGGCGGAGCGCTGCACCTGGCGCCCGGTTCTCCAGCTCAGCCCTGAAACGGGTCCAGCCGGTCGGGAGCGAAGGCGGCGGCAGCGAGGCCAGGCCTGGGACCAAAGCGGCGAGGAGGAGCGGACAGAGGGGTTGCGCCGGACTGCGCCGGGCCACCGCCATCGCTCGCCCCACCCGGCTTGCATCCAGCCGTCGCGCCCGCCGCACCCCCGGGAGAGGAGCTAGCCACCCAACCGACATGCGGCGCTCTGGCCTGCCCGCCGCCGCCCCGGCGCCCCGAGCGGCCGCCCCGCACCCCGGGGACAGGGCTCCCCGCGCCTCGCGCAGCTGAGCGCCTCCAG
GTGAGTGGGTCGGCGCCGCCCCGGG..........GTGTCTTTTACACTTCATTTTACAG
ATCACCATTCAGAATTTTGAAGGTCAGTGATCCTAATGGTGGTGGTAAACCATGGCTGCTGATGATAAAGTTGCTATCCTAACTGATGATGAAGAGGAGCAGAAGAGAAAATATGTGCTTGCTGATCCCTTCAATGGCATCTGCAGGGAACCAGAACCACCTTCTAATGAAACCCCCTCCTCCACAGAGACCTCAGCCATTCCCGAGGAGGAAATAGACTGGATAGAGAAACATTGTGTGAAAGTCAACAATGACCTTCTCATCTCCAAGGTGTTTTATTTTTTCTTTTACTCTGCCTATGGCTCTCTTTACCCTCTCTTACCTGTATATTATAAACAGCTGGGAATGTCACCTAGCCAGAGTGGACTGTTGGTGGGCATTCGATACTTCATTGAATTCTGCAGTGCCCCCTTCTGGGGTGTAGTTGCAGATCGTTTCAGAAAGGGCAAAATTGTCCTCCTCTTTTCGCTTCTGTGTTGGGTTTTGTTCAACCTGGGCATTGGATTTGTCAAACCTGCTACCTTGAGATGTCTACCAAAGATCCCCCCAACAGCTCACCCCACCAATGTAAGTCACCCAGTAACTGTTCTGCCAATGAACTTCTCCACTGTCGCTTTCTTTACCACACCACCAAAATTGCTCCAGAAAAGGGACTTGCAATTGTCTGAAACAGAGCCCAATATCTCAGACATAGATCTCGTGTCAACAGCATTGACCTTGACCAGTGAACCCACACTGAGGCCCCAGACAGAGGCAATTACCCACCCTGTTACAGGCTTGATTTTGAACACAAGCACAGTGACTCTGCCCCCCACAGGAAATGTCACCAGGGAGACAACCATTGCTGTGGTCACCACCACCAAATCTTTACCATCTGATCAAGTCACCCTTGTGTATGACCAACAGGAAGTTGAGGCGATATTCTTGATTATCTTGGTGGTTGTCATAATAGGAGAATTTTTCAGTGCCTCTTCTGTCACGATTGTAGATACAGTAACCCTCCAGTACCTGGGAAAACACCGAGACCGATATGGGCTACAGCGCATGTGGGGCTCCCTGGGCTGGGGCCTGGCCATGCTGTCTGTGGGTATTGGAATCGACTATACTCATATAGATGTGCTCATTGATGGGAAGGGGTGTAAGCCCCCTGAGTACCGGAACTACCAGATTGTCTTCATCGTCTTTGGAGTTCTCATGACCATGGCCCTGATCGTTGCCACTCAGTTCCGGTTCCGCTACAACCACTTCAACAATAGTGATGGTAAAGGGAAAGAGGTGGAGATCCCACAGGTGGAAAGGGACAACTCCACAGAGTCCTCTGAAGAGACTCCAACTGCCGCGACTCACTCACAGGCCTTCAACTTCTGGGACTTGATCAAGTTGCTATGCAGTGTGCAGTATGGCTCGGTTCTGTTTGTGGCCTGGTTCATGGGTTTTGGATATGGCTTCGTGTTCACCTTTCTCTACTGGCATCTGGAAGACCTAAATGGAACTACAACCCTCTTTGGGGTCTGTTCAGTCCTGAGTCATGTGTCCGAGTTGACCGCTTACTTCTTCAGCCACAAGCTTATTGAGTTGATTGGCCATATCAG
GTAAGAGAAAGCTTACTATTGGCTG..........TTATTTATTTATTTTTCTTTTCCAG
GGTTTTATACATTGGCCTGGCCTGTAATACAGCTCGCTATATTTACATTTCCTACCTGGAAAATGCCTGGACTGTCCTCCCTATGGAAGTTCTTCAAG
GTAAGCTGACAGCTAGCAAGAGACC..........ACGCCCACCTGCTCTTCTTCTGTAG
GTGTCACACACGCAGCCATCTGGGCAGCGTGCATCTCTTACCTCAGTGCAGCTGTCCCCCCTGAGCTGAGGACTTCTGCACAGGGAATCCTGCAAGGCCTTCATCTGGGTCTGGGGCGAGGATGTGGTGCCATGATCGGAGGCGTGTTAGTCAATTATTTTG
GTAAGAATGATTTTCCTTTTGGTCC..........TTGGCCCGCTTTGCTTATTTTCAAG
GGGCTGCTGCAACTTTCCGAGGGATTGGCATGGCTTGCCTGGTGATCCTTCTCCTCTTTGCCCTGATCCAGTGGCTGGCAGTACCAGATGAAGAAGAAG
GTGAACATTTCCTTTCCTTTCATCT..........CATTTTAACATTATTTTCTCTCTAG
ACAAGACAATGTTGGCAGAAAGGATCCCAGTTCCCTCTAGTCCCGTTCCCATAGCAACCATTGACCTGGTACAGCAACAGACAGAAGATGTCATGCCACGCGTTGAGGCCAGACTTCCGCCCAAGAAAACCAAGCACCAGGAAGAGCAGGAAGATGTAAATAAACCGGCCTGGGGGGTCAGCTCCTCGCCTTGGGTGACCTTTGTCTATGCTCTCTACCAAGTTAAAGAGCTAATTCAACTGACAAGAGAGAGCCGTGCTTCTGAGATACAACCTTTACAGGTAACCCTCTGCTGGGCTAGCGTGGCATCTGCACCGTTACTCCCTCCTTGTTCATCAAAACACATGGGAAACAGAAAAACAGGCATGTTAGCAAAGGATATCAGTGGTCTGCGATCACTCTGTCACAGTGTTTACCAGGTAGCATAGGAAGAGACTGCTTTATGGAGATCAAAAAGGCTTCACAAAGGCATTAAAAAAAAAAAAAGATCTATTCCAGCTTTGCATACTACAATTTTCAGCCGGAATATACAGCTCTTGCTTTCAGAAACTGTGTTTCCTAATCTCTATAAATCAGAATTCCAGGGGACCATTACACATACCAGGAGTGCAGTAAACAGCGACTAAATTAACCCATTAAGCTATGCCTCATATGGCTCTGTCTGATAACCCTACTCAGGAAGTCTGGTTCTGAGAGGCCTCACTTGGGAGGTAGAGGCATGTTCTTTTCTGTTCCCAAAGGCTTTCCTGAAAAAAAGGTCAAATGGTATTGATAAAGTCAGCAATTATAGAAATAAAGTCATACCCTGACTTTGGAAAAAGAATGTGCCTCCTGTGAACAGTTTGGTCAAAGCCATAAATCTACTCCACTGTTAGATTAATCTTTCCACTTTCTTGATAAGTAATGCCAGCTTTATATTTACAGTAGCTTAAAAGGACCCAGAGGAGGGCAGGCAGGATGGCCCAGTTGGTAAACACACCTGTCACCAAGCTCGATGGCCTGAGCTTGATCTCTGGAATCCAAATAGCTGAAAGACAAAGCCAACTCCCACAGGTTGTCCTTATACTTCCATCCCCACTCCATGGCACACTTATACTACAAT
ACAAACAAACAAAGAAACAAAAACAAATAAATGTGATTTTTAAAAAGAGACTCAAAAGGA
AAAATAAGAGGGAAAATAAAGAGTAATTTCTTTTTTAAAAATTTGACAAAATACTGGTGA
TTGCAGAGATGGCCCAACAGTTGTCTGCTACTGTTGCAAAGGGCCTGAGTTCGGTTCTGA
ACATCCAGGATGTGCCCAGCATCACAGCTGTATGTACCTCTATCTCCAAGGGCTTTAATG
ATACTCGTGTGCAGGTGCCCATCCGCCAACATGCATGCACACACATAATTCAAAATAAAG
ACAAAGCTTCATAAAAGAAAAAGCAAGTTTGTCCAACTACCTTAATGAATCTCAGCTTTA
TAAACATCCTGGAAAGTCTTTGCATAGTTTTCCTGAACTGACACTTCACTGATAGCCATA
TTCGTGCCACTCTGTGCATAATCCAGTTTACTCATTCATCAAGCCAGGACTGGACGTGAG
ATGGAGGAGCATTCAGGGGCTTCCAGAGCTTAAAGCAGGAAGGAGACGCAGGGAAAGGAT
GCCCCGATACCCAGGAGAGGCAATGCTTTCAGTACTTTGTGAATTTATCCTCATTTTTAC
AGATGCCCAGAAGCCTGTGCAGCATTAAAGTTTGCTTTTCTTGCCCTCTTGTGTGAGTTA
AAATTAGTAAGAGCTGACAGGTATGTTATTGTATTGTTGTGAGGTAACTACATTTCAGAA
TCAGGGGAATGAAAGAAAAAAATTTTTAGTTCAACTACAGGAAATAGAAATGAACATCAA
TTCAGAAGAAAAAAAATCCTGAAATAATCCTGTTCCCTGAGTTGTATAATCAATGTAGCA
TTTACTAAGGGTACTGTGTGTGTTCTCAGATCGCTCCCATTGGCTTCAAAGACCTGTGTG
CATTCCCTGCTCTGTCTTGCTTAGTTATTAGTACTCATTTTGAAATCCTACGTGTGCATT
AGGACTCTCTCACAGGCATTCTTTGCCTAGATATCTTGAG..........

No.	Exon / Intron	Start	End	Start Phase	End Phase	Length	Sequence
	5' upstream sequence						..........TTTCATGATAGCCCAACTGGGAACTTGAAGAGCTTTTCATTTCCACACAA TGAGGGATCCAGCTGTCTCCAGGTCACACCAGAGCAGATATGTCATCCTTTATACAAATC ACCTTTATAATTTTCCTCTGAAACGCTAGCAGATACCGTCTTTGTTTAACTTCCACGTCT CAACATTTCAAGTGGTCTGTAATAAGGCGTATTGACTGCAGAAACTGTCCCTGGAAACGG GAGCTGAGCATCCAGCAACTGTATATTTATACTTTTTCATAAAGAAGGGCTTCACATTTT GAAGCGTCAGGGCCTATAAAGTGCTCTTTAGTAATGCCTTATGATGCAGAGCCTGGATTT TCTTCTACTTGTTAGTAATTTTGAACCTAGTTAACTTTCAGTCTCATTTTGTAGCTGTAA CAATAGATTAACATTGCTTACATCTATAGGATTCAATGGTATGTAAACAATGCTTCCCAT GTAAGAAACGAATGTTCCTAAATATTAGCTGTCATTATTGCTGGCTCTGGATTCTCTGCT CCCCATCACAGGCACGCACATACCCTTGTCAAACCAAACCTGTATACAATCTACTTGCTA TCTGAATTTAACAAATGATACAGCTTAATTCTTAGAGTAACACCTGTGCTCAGGTCACCT CTTCATTAAGGTGCCATGTTCAGATGCTGTCTGGGTTCCAGAAGCTCCTGGAGCGAGCAC TGTCTTTCTCCTAGCTGTTGTCTGCGGGGTCACCCGAGGACAGTTTACCAAGGTTGTGCC TAGAACCAGACAGCATGCATCTCATCAGCAGAGTTAGCTTTGAGGGTGGCACCTATTAAG TTCTGGAAAACTGATGGTTGTCACCACCCCTAGACCAGGTTGTTATTTACTTTGGGCTTC AAGTTCTTTCCAACACCCCATCAGAGATTAGGGAGTAAAACACCGCTCAGCCCGAGCGCA ATGGGGTGTGGTGGAACGGGGATGGGGCATCGCCCACCTCTTCACTCTTT
1	EXON 1	52,727,023	52,727,462	-	-	440	AGAATATGCCACGGCAGCCGGGGCTGGATACCGGGTCCCCCGGGCGGCCCCAGAGGGCGG GAGGCCGAGAGGAGGCGGCGGACGCATCCGCCGCCGCAGGAGGCGGAGCGCTGCACCTGG CGCCCGGTTCTCCAGCTCAGCCCTGAAACGGGTCCAGCCGGTCGGGAGCGAAGGCGGCGG CAGCGAGGCCAGGCCTGGGACCAAAGCGGCGAGGAGGAGCGGACAGAGGGGTTGCGCCGG ACTGCGCCGGGCCACCGCCATCGCTCGCCCCACCCGGCTTGCATCCAGCCGTCGCGCCCG CCGCACCCCCGGGAGAGGAGCTAGCCACCCAACCGACATGCGGCGCTCTGGCCTGCCCGC CGCCGCCCCGGCGCCCCGAGCGGCCGCCCCGCACCCCGGGGACAGGGCTCCCCGCGCCTC GCGCAGCTGAGCGCCTCCAG
	INTRON 1 - 2	52,709,756	52,727,022			17,267	GTGAGTGGGTCGGCGCCGCCCCGGG..........GTGTCTTTTACACTTCATTTTACAG
2	EXON 2	52,708,164	52,709,755	-	2	1,592	ATCACCATTCAGAATTTTGAAGGTCAGTGATCCTAATGGTGGTGGTAAACCATGGCTGCT GATGATAAAGTTGCTATCCTAACTGATGATGAAGAGGAGCAGAAGAGAAAATATGTGCTT GCTGATCCCTTCAATGGCATCTGCAGGGAACCAGAACCACCTTCTAATGAAACCCCCTCC TCCACAGAGACCTCAGCCATTCCCGAGGAGGAAATAGACTGGATAGAGAAACATTGTGTG AAAGTCAACAATGACCTTCTCATCTCCAAGGTGTTTTATTTTTTCTTTTACTCTGCCTAT GGCTCTCTTTACCCTCTCTTACCTGTATATTATAAACAGCTGGGAATGTCACCTAGCCAG AGTGGACTGTTGGTGGGCATTCGATACTTCATTGAATTCTGCAGTGCCCCCTTCTGGGGT GTAGTTGCAGATCGTTTCAGAAAGGGCAAAATTGTCCTCCTCTTTTCGCTTCTGTGTTGG GTTTTGTTCAACCTGGGCATTGGATTTGTCAAACCTGCTACCTTGAGATGTCTACCAAAG ATCCCCCCAACAGCTCACCCCACCAATGTAAGTCACCCAGTAACTGTTCTGCCAATGAAC TTCTCCACTGTCGCTTTCTTTACCACACCACCAAAATTGCTCCAGAAAAGGGACTTGCAA TTGTCTGAAACAGAGCCCAATATCTCAGACATAGATCTCGTGTCAACAGCATTGACCTTG ACCAGTGAACCCACACTGAGGCCCCAGACAGAGGCAATTACCCACCCTGTTACAGGCTTG ATTTTGAACACAAGCACAGTGACTCTGCCCCCCACAGGAAATGTCACCAGGGAGACAACC ATTGCTGTGGTCACCACCACCAAATCTTTACCATCTGATCAAGTCACCCTTGTGTATGAC CAACAGGAAGTTGAGGCGATATTCTTGATTATCTTGGTGGTTGTCATAATAGGAGAATTT TTCAGTGCCTCTTCTGTCACGATTGTAGATACAGTAACCCTCCAGTACCTGGGAAAACAC CGAGACCGATATGGGCTACAGCGCATGTGGGGCTCCCTGGGCTGGGGCCTGGCCATGCTG TCTGTGGGTATTGGAATCGACTATACTCATATAGATGTGCTCATTGATGGGAAGGGGTGT AAGCCCCCTGAGTACCGGAACTACCAGATTGTCTTCATCGTCTTTGGAGTTCTCATGACC ATGGCCCTGATCGTTGCCACTCAGTTCCGGTTCCGCTACAACCACTTCAACAATAGTGAT GGTAAAGGGAAAGAGGTGGAGATCCCACAGGTGGAAAGGGACAACTCCACAGAGTCCTCT GAAGAGACTCCAACTGCCGCGACTCACTCACAGGCCTTCAACTTCTGGGACTTGATCAAG TTGCTATGCAGTGTGCAGTATGGCTCGGTTCTGTTTGTGGCCTGGTTCATGGGTTTTGGA TATGGCTTCGTGTTCACCTTTCTCTACTGGCATCTGGAAGACCTAAATGGAACTACAACC CTCTTTGGGGTCTGTTCAGTCCTGAGTCATGTGTCCGAGTTGACCGCTTACTTCTTCAGC CACAAGCTTATTGAGTTGATTGGCCATATCAG
	INTRON 2 - 3	52,676,576	52,708,163			31,588	GTAAGAGAAAGCTTACTATTGGCTG..........TTATTTATTTATTTTTCTTTTCCAG
3	EXON 3	52,676,478	52,676,575	2	1	98	GGTTTTATACATTGGCCTGGCCTGTAATACAGCTCGCTATATTTACATTTCCTACCTGGA AAATGCCTGGACTGTCCTCCCTATGGAAGTTCTTCAAG
	INTRON 3 - 4	52,663,447	52,676,477			13,031	GTAAGCTGACAGCTAGCAAGAGACC..........ACGCCCACCTGCTCTTCTTCTGTAG
4	EXON 4	52,663,285	52,663,446	1	1	162	GTGTCACACACGCAGCCATCTGGGCAGCGTGCATCTCTTACCTCAGTGCAGCTGTCCCCC CTGAGCTGAGGACTTCTGCACAGGGAATCCTGCAAGGCCTTCATCTGGGTCTGGGGCGAG GATGTGGTGCCATGATCGGAGGCGTGTTAGTCAATTATTTTG
	INTRON 4 - 5	52,662,489	52,663,284			796	GTAAGAATGATTTTCCTTTTGGTCC..........TTGGCCCGCTTTGCTTATTTTCAAG
5	EXON 5	52,662,390	52,662,488	1	1	99	GGGCTGCTGCAACTTTCCGAGGGATTGGCATGGCTTGCCTGGTGATCCTTCTCCTCTTTG CCCTGATCCAGTGGCTGGCAGTACCAGATGAAGAAGAAG
	INTRON 5 - 6	52,661,088	52,662,389			1,302	GTGAACATTTCCTTTCCTTTCATCT..........CATTTTAACATTATTTTCTCTCTAG
6	EXON 6	52,659,986	52,661,087	1	-	1,102	ACAAGACAATGTTGGCAGAAAGGATCCCAGTTCCCTCTAGTCCCGTTCCCATAGCAACCA TTGACCTGGTACAGCAACAGACAGAAGATGTCATGCCACGCGTTGAGGCCAGACTTCCGC CCAAGAAAACCAAGCACCAGGAAGAGCAGGAAGATGTAAATAAACCGGCCTGGGGGGTCA GCTCCTCGCCTTGGGTGACCTTTGTCTATGCTCTCTACCAAGTTAAAGAGCTAATTCAAC TGACAAGAGAGAGCCGTGCTTCTGAGATACAACCTTTACAGGTAACCCTCTGCTGGGCTA GCGTGGCATCTGCACCGTTACTCCCTCCTTGTTCATCAAAACACATGGGAAACAGAAAAA CAGGCATGTTAGCAAAGGATATCAGTGGTCTGCGATCACTCTGTCACAGTGTTTACCAGG TAGCATAGGAAGAGACTGCTTTATGGAGATCAAAAAGGCTTCACAAAGGCATTAAAAAAA AAAAAAGATCTATTCCAGCTTTGCATACTACAATTTTCAGCCGGAATATACAGCTCTTGC TTTCAGAAACTGTGTTTCCTAATCTCTATAAATCAGAATTCCAGGGGACCATTACACATA CCAGGAGTGCAGTAAACAGCGACTAAATTAACCCATTAAGCTATGCCTCATATGGCTCTG TCTGATAACCCTACTCAGGAAGTCTGGTTCTGAGAGGCCTCACTTGGGAGGTAGAGGCAT GTTCTTTTCTGTTCCCAAAGGCTTTCCTGAAAAAAAGGTCAAATGGTATTGATAAAGTCA GCAATTATAGAAATAAAGTCATACCCTGACTTTGGAAAAAGAATGTGCCTCCTGTGAACA GTTTGGTCAAAGCCATAAATCTACTCCACTGTTAGATTAATCTTTCCACTTTCTTGATAA GTAATGCCAGCTTTATATTTACAGTAGCTTAAAAGGACCCAGAGGAGGGCAGGCAGGATG GCCCAGTTGGTAAACACACCTGTCACCAAGCTCGATGGCCTGAGCTTGATCTCTGGAATC CAAATAGCTGAAAGACAAAGCCAACTCCCACAGGTTGTCCTTATACTTCCATCCCCACTC CATGGCACACTTATACTACAAT
	3' upstream sequence						ACAAACAAACAAAGAAACAAAAACAAATAAATGTGATTTTTAAAAAGAGACTCAAAAGGA AAAATAAGAGGGAAAATAAAGAGTAATTTCTTTTTTAAAAATTTGACAAAATACTGGTGA TTGCAGAGATGGCCCAACAGTTGTCTGCTACTGTTGCAAAGGGCCTGAGTTCGGTTCTGA ACATCCAGGATGTGCCCAGCATCACAGCTGTATGTACCTCTATCTCCAAGGGCTTTAATG ATACTCGTGTGCAGGTGCCCATCCGCCAACATGCATGCACACACATAATTCAAAATAAAG ACAAAGCTTCATAAAAGAAAAAGCAAGTTTGTCCAACTACCTTAATGAATCTCAGCTTTA TAAACATCCTGGAAAGTCTTTGCATAGTTTTCCTGAACTGACACTTCACTGATAGCCATA TTCGTGCCACTCTGTGCATAATCCAGTTTACTCATTCATCAAGCCAGGACTGGACGTGAG ATGGAGGAGCATTCAGGGGCTTCCAGAGCTTAAAGCAGGAAGGAGACGCAGGGAAAGGAT GCCCCGATACCCAGGAGAGGCAATGCTTTCAGTACTTTGTGAATTTATCCTCATTTTTAC AGATGCCCAGAAGCCTGTGCAGCATTAAAGTTTGCTTTTCTTGCCCTCTTGTGTGAGTTA AAATTAGTAAGAGCTGACAGGTATGTTATTGTATTGTTGTGAGGTAACTACATTTCAGAA TCAGGGGAATGAAAGAAAAAAATTTTTAGTTCAACTACAGGAAATAGAAATGAACATCAA TTCAGAAGAAAAAAAATCCTGAAATAATCCTGTTCCCTGAGTTGTATAATCAATGTAGCA TTTACTAAGGGTACTGTGTGTGTTCTCAGATCGCTCCCATTGGCTTCAAAGACCTGTGTG CATTCCCTGCTCTGTCTTGCTTAGTTATTAGTACTCATTTTGAAATCCTACGTGTGCATT AGGACTCTCTCACAGGCATTCTTTGCCTAGATATCTTGAG..........

Sequence Detail Report

Gene Symbol (Gene ID)	Mfsd6 (ENSMUSG00000041439)
Transcript ID	ENSMUST00000087701

		SNP Information
Strain :
Sequence Retrieve :
Exon translate : CDS Start ( 1 ) - End ( 776 ) -
Strand :	forward reverse
Show sequence :	nucleotide amino acid
Color information