MoG+ -Mouse Genome database with high added value-

Target CDS Information

Gene Symbol (Gene ID)

Hs6st1 (ENSMUSG00000045216)

Cross Reference

CCDS	CCDS48237.1
EMBL	AB024566, AK157556, AK165385, ...show all
Fantom	F430211I23, F830223D21, I1C0025K13, ...show all
GO	GO:0001525, GO:0015012, GO:0015015, ...show all
goslim_goa	GO:0003674, GO:0005575, GO:0006790, ...show all
MGI_trans_name	Hs6st1-001
OTTP	OTTMUSP00000037912
OTTT	OTTMUST00000073283
protein_id	AAH52316.1, BAA89248.1, BAE34122.1, ...show all
Reactome	R-MMU-1430728, R-MMU-1630316, R-MMU-1638091, ...show all

RefSeq_mRNA	NM_015818.2
RefSeq_peptide	NP_056633
UCSC	uc007apn.2
UniParc	UPI00005AD0E5
Uniprot/SWISSPROT	Q9QYK5
Vega_transcript	Hs6st1-001, OTTMUST00000073283
Vega_translation	178939, OTTMUSP00000037912

Definition

protein_id:ENSMUSP00000085499
translation:

MRRRRAGGRTMVERASKFVLVVAGSACFMLILYQYAGPGLSLGAPGGRVPPDDLDLFPTP
DPHYEKKYYFPVRELERSLRFDMKGDDVIVFLHIQKTGGTTFGRHLVQNVRLEVPCDCRP
GQKKCTCYRPNRRETWLFSRFSTGWSCGLHADWTELTNCVPGVLDRRDPAGLRSPRKFYY
ITLLRDPVSRYLSEWRHVQRGATWKTSLHMCDGRTPTPEELPPCYEGTDWSGCTLQEFMD
CPYNLANNRQVRMLADLSLVGCYNLSFIPESKRAQLLLESAKKNLRGMAFFGLTEFQRKT
QYLFERTFNLKFIRPFMQYNSTRAGGVEVDEDTIRHIEELNDLDMQLYDYAKDLFQQRYQ
YKRQLERREQRLRNREERLLHRSKEALPREDPEEPGRVPTEDYMSHIIEKW

Chromosome

Length
Position(start - end)

35,562
36,068,658 - 36,104,221

Orient to Chromosome

plus

Link

Location : (1:36068658-36104221)
/

Detail Map

name	Hs6st1 (ENSMUSG00000045216)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : Hs6st1 note : heparan sulfate 6-O-sulfotransferase 1 [Source:MGI Symbol;Acc:MGI:1354958]

name	Gm37335 (ENSMUSG00000104523)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : Gm37335 note : predicted gene, 37335 [Source:MGI Symbol;Acc:MGI:5610563]

name	Hs6st1 (ENSMUSG00000045216)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000088174

name	Hs6st1 (ENSMUSG00000045216) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS48237.1 Uniprot/SWISSPROT:Q9QYK5 RefSeq_peptide:NP_056633 RefSeq_mRNA:NM_015818.2 Vega_transcript:Hs6st1-001 Vega_transcript:OTTMUST00000073283 UCSC:uc007apn.2 Fantom:F430211I23 Fantom:F830223D21 Fantom:I1C0025K13 Fantom:I1C0035G15 EMBL:AB024566 EMBL:AK157556 EMBL:AK165385 EMBL:AK166962 EMBL:AK167151 EMBL:BC052316 GO:GO:0001525 GO:GO:0015012 GO:GO:0015015 GO:GO:0016021 GO:GO:0017095 GO:GO:0048286 GO:GO:0048666 GO:GO:0048666 GO:GO:0060716 MGI_trans_name:Hs6st1-001 Vega_translation:178939 Vega_translation:OTTMUSP00000037912 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0006790 goslim_goa:GO:0008150 goslim_goa:GO:0009058 goslim_goa:GO:0009790 goslim_goa:GO:0030154 goslim_goa:GO:0044281 goslim_goa:GO:0048646 goslim_goa:GO:0048856 protein_id:AAH52316.1 protein_id:BAA89248.1 protein_id:BAE34122.1 protein_id:BAE38155.1 protein_id:BAE39145.1 protein_id:BAE39293.1 OTTP:OTTMUSP00000037912 OTTT:OTTMUST00000073283 Reactome:R-MMU-1430728 Reactome:R-MMU-1630316 Reactome:R-MMU-1638091 Reactome:R-MMU-2022928 Reactome:R-MMU-71387 UniParc:UPI00005AD0E5
definition	note : transcript_id=ENSMUST00000088174 protein_id : ENSMUSP00000085499 translation : MRRRRAGGRTMVERASKFVLVVAGSACFMLILYQYAGPGLSLGAPGGRVPPDDLDLFPTPDPHYEKKYYFPVRELERSLRFDMKGDDVIVFLHIQKTGGTTFGRHLVQNVRLEVPCDCRPGQKKCTCYRPNRRETWLFSRFSTGWSCGLHADWTELTNCVPGVLDRRDPAGLRSPRKFYYITLLRDPVSRYLSEWRHVQRGATWKTSLHMCDGRTPTPEELPPCYEGTDWSGCTLQEFMDCPYNLANNRQVRMLADLSLVGCYNLSFIPESKRAQLLLESAKKNLRGMAFFGLTEFQRKTQYLFERTFNLKFIRPFMQYNSTRAGGVEVDEDTIRHIEELNDLDMQLYDYAKDLFQQRYQYKRQLERREQRLRNREERLLHRSKEALPREDPEEPGRVPTEDYMSHIIEKW

name
type	misc_feature
link
xref
definition	note : contig AC134845.5 44353..194449(1)

name	Hs6st1 (ENSMUSG00000045216)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000127133 Vega_transcript:OTTMUST00000127133 MGI_trans_name:Hs6st1-002 OTTT:OTTMUST00000127133
definition	note : retained_intron note : transcript_id=ENSMUST00000194670

name	Gm37335 (ENSMUSG00000104523)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000127606 Vega_transcript:OTTMUST00000127606 Clone_based_vega_transcript:RP24-424K5.5-001 MGI_trans_name:Gm37335-001 OTTT:OTTMUST00000127606 RNACentral:URS0000811EF9
definition	note : antisense note : transcript_id=ENSMUST00000192656

Polymorphisms Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Hs6st1 (ENSMUSG00000045216)
Transcript ID	ENSMUST00000088174

Reports
substitution
cSNPs	3
Insertion	26
Deletion	25
SNPs	-1kb 36063401(c.-5257T>A), 36063426(c.-5232A>C), 36063481(c.-5177T>C), 36063705(c.-4953G>T), 36063979(c.-4679A>G), 36064400(c.-4258T>C), 36064582(c.-4076G>A), 36064819(c.-3839G>T), 36065059(c.-3599G>C), 36065200(c.-3458A>T), 36065368(c.-3290G>A), 36065410(c.-3248G>T), 36065453(c.-3205G>A), 36065486(c.-3172C>T), 36065511(c.-3147C>T), 36065513(c.-3145T>C), 36065631(c.-3027C>T), 36065696(c.-2962A>G), 36065753(c.-2905G>A), 36065783(c.-2875G>A), 36065840(c.-2818C>T), 36066002(c.-2656C>T), 36066030(c.-2628A>G), 36066060(c.-2598A>G), 36066092(c.-2566C>A), 36066108(c.-2550G>A), 36066304(c.-2354T>G), 36066309(c.-2349T>C), 36066314(c.-2344C>T), 36066677(c.-1981A>G), 36066763(c.-1895T>C), 36066922(c.-1736A>G), 36066955(c.-1703G>C), 36067212(c.-1446A>C), 36067250(c.-1408C>T), 36067282(c.-1376C>A), 36067442(c.-1216C>A), 36067462(c.-1196G>A), 36067470(c.-1188C>T), 36067501(c.-1157C>G), 36067845(c.-813G>A), 36067854(c.-804G>A), 36067894(c.-764A>T), 36067955(c.-703T>G), 36068196(c.-462C>G), 36068347(c.-311A>G), 5'UTR CDS 36103537(c.552G>T), 36103807(c.822C>T), 36104185(c.1200C>A), 3'UTR 36104301(c.80C>T), 36104384(c.163A>C), 36104593(c.372G>A), 36104594(c.373A>T), 36104946(c.725A>C), 36105011(c.790A>G), 36105095(c.874T>C), 36105157(c.936T>C), 36105264(c.1043G>A), 36105389(c.1168G>A), 36105442(c.1221C>T), 36105446(c.1225T>C), 36105447(c.1226G>A), 36105590(c.1369G>A), 36105675(c.1454G>A), 36105796(c.1575C>T), 36105883(c.1662A>G), 36106073(c.1852G>C), INTRON 36069473(c.527+289C>T), 36069548(c.527+364C>T), 36069594(c.527+410A>T), 36069905(c.527+721T>A), 36069926(c.527+742A>G), 36070087(c.527+903G>A), 36070166(c.527+982A>T), 36070250(c.527+1066G>T), 36070251(c.527+1067C>A), 36070469(c.527+1285G>A), 36070550(c.527+1366T>C), 36070568(c.527+1384C>T), 36070660(c.527+1476C>T), 36070891(c.527+1707G>A), 36071168(c.527+1984G>A), 36071705(c.527+2521T>C), 36071834(c.527+2650G>A), 36071872(c.527+2688T>C), 36071958(c.527+2774T>C), 36072710(c.527+3526A>G), 36072728(c.527+3544T>C), 36072796(c.527+3612C>T), 36072858(c.527+3674G>C), 36073039(c.527+3855C>T), 36073313(c.527+4129A>T), 36073506(c.527+4322T>C), 36073696(c.527+4512G>A), 36073841(c.527+4657G>A), 36073895(c.527+4711T>C), 36073922(c.527+4738T>C), 36073938(c.527+4754G>A), 36074258(c.527+5074T>C), 36074267(c.527+5083A>G), 36074386(c.527+5202C>G), 36074514(c.527+5330G>A), 36074542(c.527+5358G>T), 36074610(c.527+5426T>C), 36074660(c.527+5476A>G), 36074822(c.527+5638A>C), 36074866(c.527+5682G>A), 36075003(c.527+5819C>T), 36075005(c.527+5821G>T), 36075017(c.527+5833T>C), 36075041(c.527+5857C>T), 36075138(c.527+5954T>C), 36075141(c.527+5957T>C), 36075151(c.527+5967T>A), 36075469(c.527+6285T>C), 36075470(c.527+6286A>C), 36075529(c.527+6345C>T), 36075646(c.527+6462G>A), 36075732(c.527+6548T>A), 36075826(c.527+6642T>C), 36075964(c.527+6780T>C), 36076010(c.527+6826T>C), 36076091(c.527+6907C>T), 36076336(c.527+7152C>T), 36076383(c.527+7199C>A), 36076553(c.527+7369G>A), 36076576(c.527+7392T>G), 36076645(c.527+7461C>T), 36076961(c.527+7777A>G), 36077185(c.527+8001T>G), 36077786(c.527+8602G>A), 36078314(c.527+9130C>A), 36078737(c.527+9553C>T), 36079062(c.527+9878G>A), 36079464(c.527+10280C>T), 36079593(c.527+10409T>G), 36079907(c.527+10723G>A), 36080101(c.527+10917A>G), 36080110(c.527+10926G>A), 36080154(c.527+10970C>T), 36080215(c.527+11031A>G), 36080297(c.527+11113G>A), 36080352(c.527+11168A>G), 36080353(c.527+11169G>A), 36080367(c.527+11183G>A), 36080538(c.527+11354A>G), 36080585(c.527+11401A>T), 36080587(c.527+11403G>A), 36080656(c.527+11472G>C), 36080790(c.527+11606C>T), 36080860(c.527+11676G>T), 36080868(c.527+11684C>A), 36080896(c.527+11712C>T), 36081123(c.527+11939G>A), 36081284(c.527+12100T>C), 36081311(c.527+12127T>C), 36081346(c.527+12162T>C), 36081365(c.527+12181A>G), 36081368(c.527+12184G>A), 36081440(c.527+12256A>T), 36081448(c.527+12264T>C), 36081467(c.527+12283A>G), 36081721(c.527+12537T>C), 36081725(c.527+12541T>C), 36081731(c.527+12547T>C), 36081880(c.527+12696G>A), 36081915(c.527+12731C>G), 36081923(c.527+12739C>T), 36081945(c.527+12761A>G), 36081946(c.527+12762A>G), 36081953(c.527+12769A>G), 36081959(c.527+12775T>C), 36082395(c.527+13211G>A), 36082692(c.527+13508A>C), 36083445(c.527+14261C>G), 36084399(c.527+15215G>A), 36084471(c.527+15287C>G), 36084699(c.527+15515G>C), 36085695(c.527+16511A>G), 36086372(c.528-17141A>C), 36086465(c.528-17048A>G), 36087174(c.528-16339C>T), 36087194(c.528-16319C>T), 36087259(c.528-16254T>G), 36087280(c.528-16233C>T), 36087316(c.528-16197G>A), 36087383(c.528-16130A>G), 36087405(c.528-16108G>A), 36087481(c.528-16032C>T), 36087514(c.528-15999A>G), 36087613(c.528-15900G>C), 36087715(c.528-15798A>G), 36087719(c.528-15794A>G), 36087776(c.528-15737T>C), 36087804(c.528-15709T>C), 36087847(c.528-15666G>A), 36088414(c.528-15099G>A), 36088548(c.528-14965A>G), 36088606(c.528-14907G>C), 36088735(c.528-14778G>C), 36088880(c.528-14633G>A), 36088935(c.528-14578A>G), 36088952(c.528-14561A>T), 36089037(c.528-14476C>T), 36089097(c.528-14416C>T), 36089268(c.528-14245A>G), 36089271(c.528-14242G>A), 36089395(c.528-14118C>T), 36089471(c.528-14042C>A), 36089493(c.528-14020A>C), 36089606(c.528-13907A>T), 36089611(c.528-13902G>C), 36089716(c.528-13797T>C), 36089786(c.528-13727T>C), 36089804(c.528-13709T>C), 36089859(c.528-13654A>C), 36089974(c.528-13539C>T), 36090221(c.528-13292G>A), 36090240(c.528-13273T>C), 36090251(c.528-13262T>C), 36090372(c.528-13141G>T), 36090414(c.528-13099A>C), 36090477(c.528-13036A>G), 36090605(c.528-12908A>G), 36090628(c.528-12885A>G), 36090683(c.528-12830A>G), 36090860(c.528-12653T>G), 36090950(c.528-12563A>G), 36090965(c.528-12548T>C), 36091070(c.528-12443G>T), 36091173(c.528-12340C>T), 36091312(c.528-12201C>T), 36091411(c.528-12102A>G), 36091618(c.528-11895G>A), 36091810(c.528-11703G>A), 36091875(c.528-11638C>T), 36091895(c.528-11618G>A), 36092254(c.528-11259T>C), 36092272(c.528-11241C>G), 36092523(c.528-10990G>A), 36092627(c.528-10886C>T), 36092780(c.528-10733C>A), 36092831(c.528-10682G>A), 36093127(c.528-10386A>G), 36093524(c.528-9989G>A), 36093741(c.528-9772G>A), 36093785(c.528-9728G>A), 36093815(c.528-9698C>T), 36093863(c.528-9650A>G), 36093931(c.528-9582G>A), 36093953(c.528-9560A>G), 36093972(c.528-9541C>T), 36094122(c.528-9391C>T), 36094395(c.528-9118G>T), 36094428(c.528-9085G>C), 36094589(c.528-8924T>A), 36095205(c.528-8308C>T), 36095753(c.528-7760T>C), 36095929(c.528-7584T>C), 36096351(c.528-7162G>A), 36096637(c.528-6876T>C), 36096641(c.528-6872C>T), 36096719(c.528-6794T>C), 36096754(c.528-6759T>C), 36096787(c.528-6726A>G), 36096793(c.528-6720A>G), 36097258(c.528-6255C>T), 36097264(c.528-6249T>C), 36097272(c.528-6241A>G), 36097937(c.528-5576T>A), 36098030(c.528-5483C>A), 36098097(c.528-5416G>T), 36098098(c.528-5415A>G), 36098110(c.528-5403C>G), 36098193(c.528-5320C>T), 36098248(c.528-5265G>T), 36098350(c.528-5163A>G), 36098735(c.528-4778C>T), 36098818(c.528-4695T>C), 36098940(c.528-4573G>A), 36098970(c.528-4543A>G), 36098976(c.528-4537A>G), 36099036(c.528-4477C>A), 36099063(c.528-4450A>T), 36099160(c.528-4353T>C), 36099164(c.528-4349G>T), 36099212(c.528-4301G>T), 36099258(c.528-4255G>A), 36099292(c.528-4221C>T), 36099293(c.528-4220C>G), 36099314(c.528-4199A>G), 36099393(c.528-4120G>A), 36099445(c.528-4068A>G), 36099533(c.528-3980C>A), 36099696(c.528-3817C>A), 36099812(c.528-3701G>A), 36099836(c.528-3677C>T), 36099976(c.528-3537G>C), 36099984(c.528-3529C>T), 36100000(c.528-3513C>T), 36100042(c.528-3471G>A), 36100064(c.528-3449C>T), 36100190(c.528-3323T>C), 36100283(c.528-3230T>C), 36100432(c.528-3081G>T), 36100602(c.528-2911T>C), 36100603(c.528-2910G>A), 36100645(c.528-2868A>G), 36101141(c.528-2372A>G), 36101161(c.528-2352T>G), 36101216(c.528-2297C>T), 36101462(c.528-2051T>A), 36101713(c.528-1800T>C), 36101920(c.528-1593A>G), 36102223(c.528-1290A>G), 36102275(c.528-1238A>G), 36102361(c.528-1152A>C), 36102451(c.528-1062C>T), 36102462(c.528-1051C>T), 36102605(c.528-908C>T), 36102668(c.528-845C>A), 36102669(c.528-844C>A), 36102711(c.528-802A>T), 36102748(c.528-765C>A), 36102770(c.528-743C>T), 36102993(c.528-520A>G), 36103320(c.528-193A>C), 36103323(c.528-190T>A), 36103442(c.528-71G>A), +1kb 36106613(c.2392G>A), 36106985(c.2764G>A), 36106994(c.2773A>C), 36107066(c.2845G>A), 36107288(c.3067C>A), 36108637(c.4416A>G), 36108649(c.4428T>G), 36108651(c.4430C>T), 36108985(c.4764A>C), 36109000(c.4779C>G), 36109001(c.4780A>C), 36109002(c.4781G>A), 36109006(c.4785A>G), 36109034(c.4813A>C), 36109047(c.4826T>G), 36109224(c.5003G>A), 36109299(c.5078G>A), 36109305(c.5084C>T), 36109338(c.5117T>C), 36109558(c.5337G>A), 36109705(c.5484G>C), 36109707(c.5486T>C), 36110519(c.6298G>A), 36110695(c.6474T>C), 36111029(c.6808C>T), 36111039(c.6818C>T), 36111058(c.6837C>T), 36111153(c.6932A>G), 36111165(c.*6944A>G),
Insertions	-1kb 36064138 (c.-4520_-4519insCATG), 36067629 (c.-1029_-1028insAAA), 5'UTR CDS 3'UTR 36104384 (c.163_164insG), 36104815 (c.599_600dupCC), INTRON 36072689 (c.527+3513_527+3514dupTG), 36074439 (c.527+5256dupT), 36074809 (c.527+5625_527+5626insCAG), 36074843 (c.527+5666dupA), 36074853 (c.527+5669_527+5670insA), 36075921 (c.527+6737_527+6738insGGGAGC), 36081596 (c.527+12413_527+12415dupTGA), 36082524 (c.527+13341_527+13342insTA), 36086879 (c.528-16634_528-16633dupAA), 36088081 (c.528-15427_528-15426insATGTGC), 36088347 (c.528-15161dupC), 36089060 (c.528-14453_528-14452insTCA), 36089173 (c.528-14340_528-14339insACAC), 36092086 (c.528-11426_528-11425insGCA), 36092372 (c.528-11141_528-11140insT), 36095240 (c.528-8272_528-8271insGA), 36099161 (c.528-4352_528-4351insCC), 36099179 (c.528-4334_528-4333insT), 36099633 (c.528-3876_528-3873dupGTAA), 36099816 (c.528-3696dupC), 36101689 (c.528-1813dupT), +1kb 36108716 (c.4495_4496insT),
Deletions	-1kb 36064353 (c.-4304_-4303delAG), 36064474 (c.-4183_-4176delAAGGGACA), 36064620 (c.-4037delG), 36067431 (c.-1226_-1224delGTT), 36067678 (c.-979_-975delGTTTG), 5'UTR CDS 3'UTR INTRON 36069215 (c.527+42_527+46delGGGGG), 36071218 (c.527+2044_527+2045delCC), 36072391 (c.527+3210delA), 36073668 (c.527+4489_527+4492delATCT), 36076042 (c.527+6860_527+6862delACA), 36076970 (c.527+7789delA), 36081808 (c.527+12625delG), 36082741 (c.527+13560delC), 36084857 (c.527+15678delT), 36085093 (c.527+15910delG), 36086835 (c.528-16677delA), 36086981 (c.528-16522_528-16521delGG), 36090799 (c.528-12711delG), 36094719 (c.528-8757_528-8754delGTGT), 36096974 (c.528-6538_528-6537delGC), 36100459 (c.528-3053_528-3044delCCTTCACACC), 36101549 (c.528-1960_528-1959delCG), 36103277 (c.528-232_528-227delCCACCC), +1kb 36107317 (c.3097_3102delAAAAAG), 36108712 (c.*4492delC),
coding sequence substitutions
premature termination by the nucleotide substitution	0
synonymous num	3
non-synonymous num	0
synonymous substitutions	36103537 (p.Leu184Leu), 36103807 (p.Ala274Ala), 36104185 (p.Thr400Thr),
non-synonymous substitutions
B6 transcript (ENSMUST00000088174)	MRRRRAGGRTMVERASKFVLVVAGSACFMLILYQYAGPGLSLGAPGGRVPPDDLDLFPTP DPHYEKKYYFPVRELERSLRFDMKGDDVIVFLHIQKTGGTTFGRHLVQNVRLEVPCDCRP GQKKCTCYRPNRRETWLFSRFSTGWSCGLHADWTELTNCVPGVLDRRDPAGLRSPRKFYY ITLLRDPVSRYLSEWRHVQRGATWKTSLHMCDGRTPTPEELPPCYEGTDWSGCTLQEFMD CPYNLANNRQVRMLADLSLVGCYNLSFIPESKRAQLLLESAKKNLRGMAFFGLTEFQRKT QYLFERTFNLKFIRPFMQYNSTRAGGVEVDEDTIRHIEELNDLDMQLYDYAKDLFQQRYQ YKRQLERREQRLRNREERLLHRSKEALPREDPEEPGRVPTEDYMSHIIEKW*
MSMv4 transcript	MRRRRAGGRTMVERASKFVLVVAGSACFMLILYQYAGPGLSLGAPGGRVPPDDLDLFPTP DPHYEKKYYFPVRELERSLRFDMKGDDVIVFLHIQKTGGTTFGRHLVQNVRLEVPCDCRP GQKKCTCYRPNRRETWLFSRFSTGWSCGLHADWTELTNCVPGVLDRRDPAGLRSPRKFYY ITLLRDPVSRYLSEWRHVQRGATWKTSLHMCDGRTPTPEELPPCYEGTDWSGCTLQEFMD CPYNLANNRQVRMLADLSLVGCYNLSFIPESKRAQLLLESAKKNLRGMAFFGLTEFQRKT QYLFERTFNLKFIRPFMQYNSTRAGGVEVDEDTIRHIEELNDLDMQLYDYAKDLFQQRYQ YKRQLERREQRLRNREERLLHRSKEALPREDPEEPGRVPTEDYMSHIIEKW*
homology	100.00 (412 / 412)

Exon Detail Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Hs6st1 (ENSMUSG00000045216)
Transcript ID	ENSMUST00000088174

No.	Exon / Intron	Start	End	Start Phase	End Phase	Length	Sequence
	5' upstream sequence						..........CTCTGCACAGGTCATTTCACTCCCCACCTCCAGTTGTTCTGGCCGCCTAA GTATAGCTAGGGACCCAGTATAGAGTACAACATGGGCGACGGGACCTTCCAGATGTTATA GGCTGCATAGATTACTACTAGAGCCTCCAACTTGCAGCCTAGGGCCCAGGCGACCCTCCA CTACAGGCAGAGCACCAATCAAGGCTGCAGATACTGCTGCCAATGTAAAAAAAAAAAAAA TCACGAAGGTTGGAATTTTAATTTTTTTCTAATGTTGGTTCACTATTTTGTTTGTTTGTT TGTTTGTTTGAGTATGACCAGGATCAAAACAGGGCACACTGGGCGAGAGGGACAAATAAA GCTTGTCCTCTGGTCTCTGCACACATTTCGGTTTATCTTCAACTGAGGGCTTTGGGTCAT TGTCCCAGTGCCTCCAGGGGACTGGTGATATCCACATAAGAGCCAGATCCATGCCCTTAA CGTCTCTCTTCCTTCCCCACCCTTTCTGGTAGTCCTAAACCACCTGGTGGTCCCGACTCC CAGCGCTCTCGAACTTGGAACTTCCGATCCTTCAATGTGAAGGTCAAAGCCTCCGTATTC CCGTGGGAGACAGAGAGCGCAGGTAACACAAACTACCATAACCAGAGAAGGTGAAAAAAC TCGGGCTCCCAAACCCAGGACCAATGCCCAAAAGAGCCACCCACTCGTAGGCTCGGGACA ACCCAGTCGCCACCCACAGGTCTGCGAGCTGGATCCAATGCCCTTTCCGTAGCGACCGGC GTTGACAGTGTGAGAGACACGCGACCGGTCGCCCAGCTCTGGCCTGTGCCTGGGCCTCCT CCGGCCCCGCCCCTCCCCCAGGGCGCTCCAGAGGCGGAGCGGAGGATCGGAGCGGGCGGC GACAGCAAGAGGCGCCGCGAGGGCGGGCCAGGGGCGGGCCGGGGCGGAGCCGCGACGGAC TGCGGAGACGCGGCGGCGCACGGGGCGGTGCAGAGCGTTCTCGGCGCTGA
1	EXON 1	36,068,400	36,069,184	-	2	785	GCTTTGCGGGCGGGTGCGGGCGCGCGCGGCTGCGGGGCGCTGTGGCGGGGGCCGGGCTGT ACGCTAGCCGAGCCGGGATCGGGGCGGGGAGCAGCCACGGCGCCGCCGAGGCCCGGGGCC CGCGACGCTGCGCACAGCCTGGGCGCCGAGTAGCCGGGCCGGGCCGGAGCGCGGGCGGCG GTGGCGGCGGCGGTGGCGGAGCAGCTGCGCCCCCCGCCCTCCCAGGCCCGGCGCCCGGGC CGCTGGCGATGGTGACACATGCGGCGGCGGCGCGCCGGCGGCAGGACCATGGTTGAGCGC GCCAGCAAGTTCGTGCTGGTGGTGGCGGGCTCGGCGTGCTTCATGCTCATCCTTTACCAG TACGCGGGCCCGGGGCTGAGTCTGGGCGCGCCCGGTGGCCGCGTGCCCCCCGACGACCTG GATCTCTTCCCCACGCCGGACCCACATTACGAGAAAAAGTACTACTTCCCGGTGCGCGAG CTGGAGCGCTCGCTGCGCTTCGACATGAAGGGCGACGACGTGATCGTCTTCCTGCACATC CAGAAGACCGGCGGCACCACCTTCGGCCGCCACCTAGTGCAGAACGTGCGCCTCGAGGTG CCCTGCGACTGTCGCCCGGGCCAGAAGAAGTGCACCTGCTATCGGCCCAATCGCCGCGAG ACCTGGCTCTTCTCTCGCTTCTCCACGGGCTGGAGCTGCGGGCTGCACGCTGACTGGACC GAACTCACCAACTGTGTGCCCGGTGTGCTAGACCGCCGCGACCCAGCAGGTCTGCGTTCG CCCAG
	INTRON 1 - 2	36,069,185	36,103,512			34,328	GTGAGCGCCCGCTGCGGGAAAGTGT..........GATCTCTTCCCCGTTCTCATTGTAG
2	EXON 2	36,103,513	36,106,446	2	-	2,934	AAAGTTCTACTACATCACCCTGCTTCGAGACCCCGTATCCCGCTACCTGAGTGAATGGCG ACATGTACAGCGTGGGGCCACGTGGAAGACCTCCTTGCACATGTGTGACGGGCGCACACC GACCCCAGAGGAGCTGCCGCCCTGCTACGAGGGCACAGACTGGTCGGGCTGCACGTTGCA GGAGTTCATGGATTGCCCCTATAACCTGGCTAACAACCGGCAGGTGCGCATGCTGGCCGA CCTCAGCCTGGTGGGCTGCTACAACCTATCTTTCATCCCCGAGAGCAAGCGGGCTCAGTT GCTGCTGGAGAGCGCCAAGAAGAACCTGCGAGGCATGGCCTTCTTCGGCCTCACTGAGTT CCAGCGCAAGACGCAGTACCTATTTGAGCGGACGTTCAACCTCAAGTTCATCCGGCCATT CATGCAATACAACAGCACGCGGGCGGGCGGTGTGGAGGTGGATGAGGACACTATCCGCCA CATCGAGGAGCTCAACGACCTGGACATGCAGCTGTATGACTATGCCAAGGACCTCTTTCA GCAGCGTTACCAGTACAAGAGACAGCTGGAGCGCAGGGAACAGCGCCTGCGCAATCGCGA AGAGCGCCTCCTGCACCGCTCCAAGGAAGCGCTGCCACGGGAGGACCCAGAAGAGCCGGG CCGTGTGCCCACAGAGGACTACATGAGCCATATCATTGAGAAGTGGTAGTAGTGTCAGGG GCAGAGAGTGATGGGCACGATTTAACAGGGAAAGAAATGGGGCCAACAGTTCTTCCTGTT CGGTGCAGTGGGTGCTAGTAGGATGCCCTAGTCCTTGATGGGGCAGGGTAGGACCTCTGG GGCAGATGGCCTCCCTGCTCTTCTGGCCCCCATGTCATAGTTAAAACTGACAAGGATTTG AAAAAGACTGGCGAGGGAACGTGTCTGCTTAGCCGAGACTCCCATACCTACTATGCACGC ACTGGCCCCCAACGACCAGCCCCCTAGGAACGTGTTACTAGCTCCTAATAGCTTGGTTGA AGCTCCTTGGCCTCTGAGGACCCCTAATAACCCAGAATCTTGGGGAGCCCTTTCCTTTGA ATATACAAGCATGTCTCTGAGGCATCCTCAGACCTGGAGTGCTCCCCAACCCCCACCTAT CAAAGCTGCTTTCAAGGTCAGGGTCAGCCCCAGCTGTGGCAGAGAAGACTCAAGTCTGGT GCCTGGCCTCTGCACTGTCTGGAGCATGATCAGAATCCACGGTGTATCCTGGCTTTAGGG GAACCAGGTTCAAGCAGGAAAGGGATGGACACCAAGAGGTCTTCCCCCCACCCCCAGCTC CCCACCAATCCCTATGCTTTCTGATGCACTGCCCCTCCCCCATCACTGAAACATTTATAC AAGGGCTTGTGTGCCAATGTTCCTACCATACCAGCAACTCTTTCTATCCCGTGCATAAAA GCATCCCTTGGCTGGGATATAGGGCCACATCAACCTGAGTTGGTACTGGGTGGCCAGGGT GGGGACTTTCCCATTCTCAGCTGAGGTTGGAAGAAACCACTCTGGGTGTCCTTTCTGGGA CCTGTCTGCATAACCCTCCCCACCCTGGCTCTCCTGCATCTTCTTACCCTTTACAAAGTC TGACCCGGCCATTTCCAGCAGACCCGTGAGCCAGCCAGGGACCGGACTAGAAGCCATGTT GCATATTGGGGTTTTTGTTTGTTTGTTTTTTAAGCACTTACCAAGTGCCCTATCCCTGGC AGGCCCCTAGTAGGGGTGTCGTGGCTTTTTTCAGAGTCTATAAGCATGCAGCCATGGGTT GTGAGCTGACCTTGAGACAGGACGGGTCCCACACTCCCTGCCTCTGTCTCACTCAACACT CAGGCTAAGAAGGAGCAGGTCACCACAGACAAGAGTGGGGCCATATGTAGCACAGCAATA TTCCAGATGTTGGCAGGTATTGCTGCTGCCCTAGAGCAATGGCTTAATCTTCACACATGT GTGGTGTGGCACCAGGCACTTGACCTTGGGGGGTCTACAAGCAAGATGAGTTCTGATAGG CACAGTCCAGCCCAGTCTAGCACCACCTTTTATGGTAATTGATCACTCTGAGGAGGTGGG TAGCAAGATGAATTAGGAGGTCAAGGTCACTGAGAGGAATTTGTTTAGATGCCCAGTTTA GAATGAATAGATATCTGCGGGGAACCTGGGGCATTTTGGGGAACCCTGGGGTCTTTTACA GGTCATGTTGGTTGCTGCTGCTTCTGTCAGGAAGTACCCTAGCTCCACGTACTCCCCGCC CCCTGCCGCCCCCTTCACAACCTTATGTGTACATGACCTGAACATAGGATCTGTTCTATA CATACTGGAATATGTTTTAACATATGCCCCGCCATCCTGACTCACACGGAAGCACGGGTC TCTTCTCAATCTTTGCTGCATTTGGAAAATGTTCCCTCCCATCTCAGGCCAGCGCCATGT CGAGGCATCTTCAGTCCACCCCTGCCTAAGGCTCAGGCTACCTGCTTTGGGGCACAGCTT CCTGGTACTCACAGCATCTCAGAACAGGGTGCTTCCCTCTCCCTCCAGCTCCAAGGACTC TGCCTACAGGAGTGTGCCTTGGGGCTGAAAGGCCATGCAAACACAACAAACTAATAACTC AGTCCCAAAGCACCCTGCAGCCCTGCAGACACCCCCCCCCTCCAAGAGTGGGAGGCAGGG ACCACAGAACTGTCCAGCCAACACGTCTGAACTGGAACTGTTCCACTTGAACCCGGGAGC TTTAAAGCTTTATTTATTTATAGCTTCTTATTAAAAATTTAAAAAAAGCGTTGAGGAGGA ATCCTTTGGTTATTCATACGGAATTGATGATGGAAAAGCAACTGGTTGTCTTCTAATTGT CTTTGTCTAGATGGAAACTGAACCTTAGCAGATGAATAAACCCTGAAAAGGTCA
	3' upstream sequence						TTGTGTGCTGTGGTCTGTGGTGACTTAGCCCTCCCAGGCATTGCATTGGCCTGCATCATA TTTCGGCAGGGGTGACAGCAAGGCTGCTCCGGTGCAGGTGCCCCTCCCCCTGCACAAAGT GAGGCGCTGGGTAAGGAAAAACTCATAGACCACAAAAGGTAGAAACATACATTTATTATA AGACGTGCACAGGTGACACCAGGTGAAAGGACTGTCACCAACAGCAGTGACTGTACCATG TGTCACCAGTGACTCCCTCTGCTCAGCTTTTAACTTGGAAATTTTTCAGGTGGCAAAGAG AAAGAGGTCTCTGGGCAGGCATGCCTCACAGCTGGCAGAGTGTCTAGCATGCAGGAAGCC TAGGTTTGAGTCCCAGCACTGAGGTGAAGGCAGGAGGTCATCCTTGACCAACAGGAAGTC TGAAGTCAGTTGGGCAGAGTCCTGTCTCAATAAAACTAGCCTTATTCTTCATTATAAGAA ATTATGAGGGGCTGGAGAGATGGCTCAGCGGTTGGGAGCACTGGCTACTCTCCTGGAGAT CCTAGTTCAATTGCCAGCAACCACATGGTGGCTCACAACCACCTGTAATGAGATCTGATG CCCTCTTCTGGTGTGTCTGAAGACAGCTAGAGTGCTCATATAAATAAATAAATCTTTAAA AACAGAAATTATGGGGCTGGTGAGATGGCTTAGTGGGTAAGAGCACCCGACTGCTCTTCC AAAGGTCCGAAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTAATGAGA TCTGATGCCCTCTTCTGGTGCGTCTGAAGACAAAGACAGCTACAGTGTACTTACATATAA TAAATCAATCAATCAATCAATCTTTAAAAAAAAAAAGAAATTATGAGTTAATAGAAAATA TGTCATGTTGAGAGAGAGAGAGCTGTTCTTAGCATCAGCTCCAGTTTAGTTCCTCATCTG TTGCTAGCCGCACAGCTCCACAACTCAATACAAAGAATAA..........

Sequence Detail Report

Gene Symbol (Gene ID)	Hs6st1 (ENSMUSG00000045216)
Transcript ID	ENSMUST00000088174

		SNP Information
Strain :
Sequence Retrieve :
Exon translate : CDS Start ( 1 ) - End ( 412 ) -
Strand :	forward reverse
Show sequence :	nucleotide amino acid
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