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Target CDS Information

Gene Symbol (Gene ID) Pkhd1 (ENSMUSG00000043760)
Cross Reference
CCDS CCDS14841.1
EMBL AC101729, AC101789, AC161178, ...show all
GO GO:0001822, GO:0005515, GO:0005737, ...show all
goslim_goa GO:0000902, GO:0003674, GO:0005575, ...show all
MGI_trans_name Pkhd1-001
OTTP OTTMUSP00000032279
OTTT OTTMUST00000064911
RefSeq_mRNA NM_153179.3
RefSeq_peptide NP_694819
UCSC uc007akv.1
UniParc UPI0000D8B930
Uniprot/SPTREMBL E9PZ36
Vega_transcript OTTMUST00000064911, Pkhd1-001
Vega_translation 178807, OTTMUSP00000032279
Definition protein_id:ENSMUSP00000085794
translation:
MMLAWLVSLLSMEVLLLAKPYSSFQFEPAEGSLAGGTWITVVFDGLDRSILYPNNGSQLQ
IDLVSVAIPTLRIPCDVSPAFVDLPVVTCQTRSLPSEADAGPYSLEMRSGEQVLGTPCPG
SLDSCTFKFSKDQTPVLYQVYPASGVPGEVVSVYGRVITTWLETFDPDVDYIESPLILEA
REDKWLTPCSLINRQTGSCFPIQEEHGLGNVQCRVEGDYIGSQNVSFSVFNKGRSMVHKE
AWLISAKQELFLYQTYPEILSVFPKVGSLGGRTDIIITGDFFDPSARVTIAGIPCDIRYV
SPRKIECTTRAPGNEARLTAPQAGNRGLRFEVGDATKDVELTEATPGYRWQIVPNASSPS
GFWSKEGRPFRARLSGFFVAPQTNNYTFWIQADSQASLCFSSSEEPRTKVEVASVGVGTA
DWFDSWEQIGNEGSWHQKTTKLELQGGAKYYLEAEQHGIAPSRGMRIGVQIHNTWLNPDV
VNTYLLEKHQIRARAQRLPEIQVLHVSGKGNFFLTWGNVSSQPVPANATAQQIQTTIEEL
LVVKCNLAPFSAHVLLRLGFEQGLEGSRSDGVRTSSTEPFCGRFSLGQLGHLILIPEAAD
KGYQLDRYPYLCLAYRGHMNKTLDMTVSFLFGFQTIMKNITCDWSLTDPHPESWQFTCIN
LWDTCLCHSEDIQSSLANTPLLAHRIDIRPVVPEAGLLYVDEIILADTNVTVSQADSGRA
CPGGNVVESVSVVGVPPVYSISSWLAGCGSELPLITACSVSTEGTGDGSELIEVTAQRLQ
RTSPPLGGHFFLYLSDTVIPDVPVRMSARQLHKLLQDSADESTSGYLNAGDFTVTEDLNS
CYEHVWTLSWTTQTGDLPNFIRVSDQNLTGVNPTVTARVVYDGGVFLGPIFGDMLATANQ
QTQVAVQVNDIPAYCSGSCSFQYQQESTPSVDHVWYSLGSDVNLLVHFTGTGFPRDTQFL
QVTVNKTSCEVLFSNETNVACELALLPVGVHQIFMLVIPSGLAVHASGEDLLLHVEPRLD
AVEPSTAAEIGGRWVTLRGSSLEGVSLVLFGTQSCVIDAIRSNSQQIQCKVPPRGKDGYT
VNVTVISGDHSTVLARAFTYVSSLNPVIVSLSRNRSSIAGGEILFLGMSLLVNYTDLDVQ
IHVQDTSAQVLSQTAWGLEVVLPPLVPGIHVISAFINGVSIRSQGVDLYIQYLTEVFSVE
PCSGSLLGGTLLSLLGTGLGRDPALIRVLVDNHPCDIVNLTEVNIWCETPPAVLPPRADV
LTVLASVEIWAGNTSFFHGPSLVGKGFTFTYEAAATPVVTAMWGEFRNNSVRFYVEGSNI
SDSVILLGSLKCELEVQFFGDSMNLSGCFFPLHSLEAGVYTLQVRHKRMGFANMSVVPQK
FELSPQIIAIFPTHGSKCGGTVLTVKGMAFSSRKRSVHVDISGPFACMILSLEDHTVLCQ
TRFVGDQFSEASLALNITVLVNGLTSKCKGNCTLFIEEAATPIVDALTISISGSLTMVLM
RGRRLATTADEPIAFVDDQLPCHTTFFNTSHVACQIRDLAPGFHYLSAVHTSAGYACLNS
VSRNFFIVPQVLDYFPKDFSIHGGSLLTIKGTALRGWKATVVYVGRQACLTVNFSSDFIQ
CIVPAGNGSAALEIDVNGVLYHIGLVDYSSIFTPELLSVSRSQDILTFTVARISGAANVD
IFIGTSPCLGVAGNRTVLQCMVPLLPAGEYLVTGYDHSRGWASSTLILVLRATVTSVTKN
YGCLGGRLLHVLGAGFSPGNISAAVCGAPCQVLANATVSAFSCLVLPLHVSLAFLCDLRH
AEDSCKVRSSTYLRCDLTVSMGTERLPGSWPYVYLCEESSLCLFEPDHWTESVFPSFSGL
FLSPKVERDEVLIYNSSCNITMETEAEMECEMPNQPITAKITEIQKSWGQNTQGNFSFQF
CRRWSRPHSWFPQRVPHDGDSVTVETGHLLLLDANTSFLNSLHIKGGKLIFMDPGPIELR
AHSILITDGGELHIGSEEKPFQGKARIKIYGSVHSTPFFPYGVKFLAVRNGTLSLHGSVP
EVTVTYLQAAAHAGDKVLTLGEAVDWKPGDEAVITSGMTVAGAEATEVVVVETVHNADLH
LRNPLRYSYDFRENWVAGENPILKPTVALLSRNIIIQGNFTLERVKLLNSCQEANTAKGN
LKHCLYSKSEKMLGARDLGARVIIQSFPEEPSFVKLKGVQFRDLGQAFHKHLSSLALVGA
MRGSYIQSCSVWNSFSRGLSMHRTWGLKVDSNVFYKIVGHALLLGSYLDGRFSTSETVTG
RKNGWWEQGSTIRNNVIISVSAAEGLSGSEMLAPAGIYTFSPTNVMEGNRVCAAGYGYVF
HLVTSQTLQAPLLSFNWNTAHSCTRYGLLVYPKFQPPWNNDTGFTLFQNFMVWGSAGGAQ
IFRSNNLHLKNFQVYACRDFGIDILESDANTLITDSFLLGHFTHKGSLCMSAGIKTPQRW
ELTISNTTFVNFDGNCVAIRTCSGCFQGQGGYTVKTRQLKFVNSSNLVAFPFPHAAVLED
LDGSLSGKNGSHVLASMETLSDTCLTNASFSQIVPGSVCGEAVLFHRMSIALANSLDVPK
NLTITDISNKTITVNYVEDTLSNYYGWMALLLDQETYSLQFESPWMNRSLQYSATFDSFA
PGNYLLIMHRDLPPYPDILLRCGSQVGHSLPFHPLPSQDRACDWFFNRQLRQLTYLVSGE
GQVKVFLQLKPGVPPSVSASTSVPESASRWSLPETWQDVEKGWGGYNHTIPGPGDDVLIL
PNKTVLVDTDLPVLRCLYVMGTLEFPVDRSNVLSVACLLIAGGELKVGTLENPLEKDQRL
LIFLRASEEVVCDYFEGIHVDPGTIGVYGKLRLHSAYPKKSWVHLGADIAPGNERIIVHN
AVDWQPHDTIVLSSSSYEAHEAEVLTVKEVKGHHIRIYERLKHRHIGSTHTMEDGQQVHL
AAEVGLLTRNIRIQPDSSCRGRLLVGSFRKSSGEDFSGVLQLLNVEIQNMGLPLYSSIEF
TGVSAGSWVISSTVHQSCSVGIHASSSHGVILTDNVVFGTNGHGIDVEGQNYSLTNNLVI
LTMQSANSSPWVAGIKVNYAEDIILHGNVVAGSERLGFHVGGHGCSSEVLWSDNVVHSSL
HGLHLYKKHESNNCTGVSGFMAFKNFDYGAMVQTENSVDIQNITLVDNTVGLLAITYVSS
ALLSSVSTVQITLRNSVIVATSSSFDCIHDRKAPQSANWTSTDRAPSNPRGGRIGILWPV
SASEPNAWPQEPWHKVRSRHSVPGIMKLQDVTFSSFVKSCYSNDLDVCILPNEYSTGVMY
PITAERTRMLGIKDKNKFYFPVLQSSKDLVGTICPTLVCEYPRKYLFTDLDGRTLGLPPP
VSVFPRTEEEWTGSFLNTGIFREEQKCTFRAMNQGFFCKQTEHAVLILDNVDATWTIPKS
HPLVSVTNGFVDTFSIVKDSDLCPPTSSLSTFYSILPTRQMTKVCFPEQTPPFLRFLLLG
NQRASKLILAVFYNEIQSPHVFLDKSFIPPTPLESAFSLLAEPSGANYFDIMNNLLYVVL
QGEEPVEIHSSVSIHLALTVTFSVLEKGWERAMLESLSDFFQIDPNQIRLTLEMPGNKET
LEAIANSERKRKRNCPSVTCGGPSIRYGQRRPLMAEMTSLKITPATTLETFSKVIVIEVG
DLPNIRNSEPIQSLPSNRLQRLVNQVITAQQTGALENVLGMTVGALLVTQSKGVTGYRNA
SSLITGNLIYTRPSELSILVQPSDGEVGIELPVQPRLVFLDEKNERVESLGLPSEPWIIS
VSLEGASESVLKGCTLAETRDGYVTFSRLAVLISGSNWHLFFTVISPPGTNFTARSRTFV
VLPVASKERSTIILALSLCSVASWVALSCLVCCWFKKSKTRKIKPEDISESQAKEQKKNT
HNSSKPRGLQAKTAKENTLMGEDMRMKVMQGMQSQFPQHSMDGVSKRKVSRLAVTEERTT
TPAPKIPRITCVPGSLAQQLTLQEPGNWQEAQQQLLRYQLAGRNQLLLLRPDLRQERKQG
QEPSQLDKGSDCTGLSQEKATCIPTETFSLHTAPPETIQ

Chromosome 1
Length
Position(start - end)
557,024
20,058,298 - 20,615,323
Orient to Chromosome minus
Link Location : (1:20058298-20615323)
/

Detail Map


 

Report

Polymorphisms Report

Target Strain  MSMv4  JF1v3  KJRv1  SWNv1  CHDv1  NJLv1  BLG2v1  HMIv1  BFMv1  PGN2v1
Gene Symbol (Gene ID) Pkhd1 (ENSMUSG00000043760)
Transcript ID ENSMUST00000088448
Reports
substitution
cSNPs117
Insertion262
Deletion358
SNPs
+1kb
5'UTR
CDS
20058325(c.12153T>C), 20058333(c.12145A>G), 20058366(c.12112G>A), 20058537(c.11941A>G), 20058600(c.11878A>G), 20058616(c.11862T>C), 20073490(c.11611G>A), 20073566(c.11535T>C), 20073572(c.11529T>C), 20081220(c.11451C>T), 20116965(c.11118A>T), 20116971(c.11112G>A), 20117066(c.11017T>G), 20117098(c.10985T>C), 20117100(c.10983C>T), 20117218(c.10865G>A), 20117220(c.10863T>A), 20117258(c.10825A>G), 20117277(c.10806G>A), 20117340(c.10743T>C), 20117350(c.10733G>C), 20117415(c.10668G>C), 20117496(c.10587T>C), 20117583(c.10500T>C), 20117694(c.10389G>A), 20117753(c.10330C>T), 20117837(c.10246A>C), 20117859(c.10224C>T), 20199452(c.9867C>T), 20200552(c.9776G>A), 20200626(c.9702C>T), 20200989(c.9339T>C), 20201170(c.9158C>T), 20201211(c.9117C>T), 20201241(c.9087C>G), 20201277(c.9051T>C), 20209301(c.8792C>T), 20211937(c.8679C>T), 20222904(c.8491G>A), 20239410(c.8313C>T), 20239413(c.8310T>A), 20275636(c.8167G>C), 20310610(c.8004T>G), 20310626(c.7988G>A), 20310664(c.7950G>A), 20310694(c.7920T>C), 20347321(c.7605A>G), 20347333(c.7593T>G), 20347350(c.7576T>G), 20347381(c.7545A>G), 20347439(c.7487C>G), 20350420(c.7461A>G), 20364160(c.7053A>G), 20373859(c.6978G>C), 20377411(c.6757G>A), 20381584(c.6486G>A), 20391515(c.6425T>G), 20391517(c.6423A>T), 20391522(c.6418T>C), 20391612(c.6328G>A), 20391613(c.6327T>C), 20392019(c.6310C>G), 20392087(c.6242C>A), 20414357(c.5973G>A), 20414408(c.5922A>G), 20450375(c.5742C>A), 20520157(c.5365C>G), 20520263(c.5259A>C), 20522743(c.5145T>C), 20522771(c.5117C>G), 20522778(c.5110C>T), 20522869(c.5019C>T), 20522938(c.4950T>C), 20522979(c.4909A>G), 20523187(c.4701C>T), 20523313(c.4575A>G), 20523757(c.4131G>A), 20523855(c.4033T>C), 20524000(c.3888A>G), 20524089(c.3799G>T), 20524097(c.3791T>C), 20524117(c.3771G>C), 20524159(c.3729G>T), 20534578(c.3512T>C), 20537355(c.3276A>T), 20537356(c.3275C>T), 20537367(c.3264C>A), 20537405(c.3226A>G), 20540332(c.3204A>G), 20540438(c.3098G>A), 20547347(c.3013C>A), 20549732(c.2663G>A), 20549733(c.2662G>C), 20549788(c.2607T>C), 20549806(c.2589C>A), 20550872(c.2561C>T), 20555126(c.2225G>C), 20555140(c.2211G>A), 20558708(c.2014A>C), 20559448(c.1931G>T), 20559450(c.1929T>C), 20559462(c.1917T>C), 20562376(c.1814T>C), 20562501(c.1689T>C), 20563652(c.1658A>G), 20565624(c.1481G>T), 20565679(c.1426T>C), 20565692(c.1413C>T), 20565737(c.1368A>G), 20566850(c.1135G>A), 20585163(c.696G>A), 20586879(c.541A>G), 20608334(c.369T>C), 20608336(c.367G>A), 20608382(c.321G>A), 20612738(c.239C>T), 20613423(c.105A>G),
3'UTR
INTRON
-1kb
Insertions
+1kb
5'UTR
CDS
3'UTR
INTRON
-1kb
Deletions
+1kb
5'UTR
CDS
3'UTR
INTRON
-1kb
coding sequence substitutions
premature termination by the nucleotide substitution0
synonymous num62
non-synonymous num55
synonymous substitutions 20058325 (p.His4051His), 20058616 (p.Val3954Val), 20073566 (p.Ala3845Ala), 20073572 (p.Pro3843Pro), 20081220 (p.Asn3817Asn), 20116965 (p.Leu3706Leu), 20116971 (p.Gly3704Gly), 20117100 (p.Asp3661Asp), 20117220 (p.Gly3621Gly), 20117277 (p.Glu3602Glu), 20117340 (p.Phe3581Phe), 20117496 (p.Phe3529Phe), 20117583 (p.His3500His), 20117694 (p.Lys3463Lys), 20117859 (p.Leu3408Leu), 20199452 (p.Ile3289Ile), 20200626 (p.Ile3234Ile), 20200989 (p.Asp3113Asp), 20201211 (p.Gly3039Gly), 20201241 (p.Gly3029Gly), 20201277 (p.Ser3017Ser), 20211937 (p.Ser2893Ser), 20239410 (p.Leu2771Leu), 20310664 (p.Arg2650Arg), 20310694 (p.Ala2640Ala), 20347321 (p.Ala2535Ala), 20347333 (p.Ser2531Ser), 20347381 (p.Ala2515Ala), 20350420 (p.Gln2487Gln), 20364160 (p.Pro2351Pro), 20381584 (p.Lys2162Lys), 20391517 (p.Thr2141Thr), 20391613 (p.Tyr2109Tyr), 20414357 (p.Glu1991Glu), 20414408 (p.Pro1974Pro), 20450375 (p.Gly1914Gly), 20520263 (p.Gly1753Gly), 20522743 (p.Tyr1715Tyr), 20522778 (p.Leu1704Leu), 20522869 (p.Ile1673Ile), 20522938 (p.Ser1650Ser), 20523187 (p.Ile1567Ile), 20523313 (p.Thr1525Thr), 20523757 (p.Val1377Val), 20523855 (p.Leu1345Leu), 20524000 (p.Thr1296Thr), 20524159 (p.Val1243Val), 20537355 (p.Thr1092Thr), 20537367 (p.Gly1088Gly), 20540332 (p.Gln1068Gln), 20549788 (p.Thr869Thr), 20549806 (p.Val863Val), 20555140 (p.Pro737Pro), 20559450 (p.Asp643Asp), 20559462 (p.Asn639Asn), 20562501 (p.Gly563Gly), 20565679 (p.Leu476Leu), 20565692 (p.Ile471Ile), 20565737 (p.Gln456Gln), 20585163 (p.Lys232Lys), 20608334 (p.Asp123Asp), 20613423 (p.Gly35Gly),
non-synonymous substitutions 20058333 (p.Ser4049Gly), 20058366 (p.Glu4038Lys), 20058537 (p.Thr3981Ala), 20058600 (p.Thr3960Ala), 20073490 (p.Val3871Ile), 20117066 (p.Ser3673Ala), 20117098 (p.Leu3662Pro), 20117218 (p.Gly3622Asp), 20117258 (p.Arg3609Gly), 20117350 (p.Ser3578Thr), 20117415 (p.Leu3556Phe), 20117753 (p.Pro3444Ser), 20117837 (p.Thr3416Pro), 20200552 (p.Arg3259His), 20201170 (p.Ser3053Phe), 20209301 (p.Thr2931Ile), 20222904 (p.Val2831Ile), 20239413 (p.Asp2770Glu), 20275636 (p.Val2723Leu), 20310610 (p.His2668Gln), 20310626 (p.Gly2663Glu), 20347350 (p.Ser2526Ala), 20347439 (p.Thr2496Ser), 20373859 (p.Met2326Ile), 20377411 (p.Val2253Ile), 20391515 (p.Leu2142Arg), 20391522 (p.Phe2140Leu), 20391612 (p.Asp2110Asn), 20392019 (p.Pro2104Ala), 20392087 (p.Ala2081Glu), 20520157 (p.His1789Asp), 20522771 (p.Pro1706Arg), 20522979 (p.Asn1637Asp), 20524089 (p.Val1267Leu), 20524097 (p.Leu1264Pro), 20524117 (p.Arg1257Ser), 20534578 (p.Val1171Ala), 20537356 (p.Thr1092Ile), 20537405 (p.Lys1076Glu), 20540438 (p.Arg1033Gln), 20547347 (p.His1005Asn), 20549732 (p.Gly888Glu), 20549733 (p.Gly888Arg), 20550872 (p.Thr854Ile), 20555126 (p.Ser742Thr), 20558708 (p.Ile672Leu), 20559448 (p.Trp644Leu), 20562376 (p.Leu605Pro), 20563652 (p.His553Arg), 20565624 (p.Arg494Leu), 20566850 (p.Val379Met), 20586879 (p.Arg181Gly), 20608336 (p.Asp123Asn), 20608382 (p.Met107Ile), 20612738 (p.Ala80Val),
B6 transcript
(ENSMUST00000088448)
MMLAWLVSLLSMEVLLLAKPYSSFQFEPAEGSLAGGTWITVVFDGLDRSILYPNNGSQLQ
IDLVSVAIPTLRIPCDVSPAFVDLPVVTCQTRSLPSEADAGPYSLEMRSGEQVLGTPCPG
SLDSCTFKFSKDQTPVLYQVYPASGVPGEVVSVYGRVITTWLETFDPDVDYIESPLILEA
REDKWLTPCSLINRQTGSCFPIQEEHGLGNVQCRVEGDYIGSQNVSFSVFNKGRSMVHKE
AWLISAKQELFLYQTYPEILSVFPKVGSLGGRTDIIITGDFFDPSARVTIAGIPCDIRYV
SPRKIECTTRAPGNEARLTAPQAGNRGLRFEVGDATKDVELTEATPGYRWQIVPNASSPS
GFWSKEGRPFRARLSGFFVAPQTNNYTFWIQADSQASLCFSSSEEPRTKVEVASVGVGTA
DWFDSWEQIGNEGSWHQKTTKLELQGGAKYYLEAEQHGIAPSRGMRIGVQIHNTWLNPDV
VNTYLLEKHQIRARAQRLPEIQVLHVSGKGNFFLTWGNVSSQPVPANATAQQIQTTIEEL
LVVKCNLAPFSAHVLLRLGFEQGLEGSRSDGVRTSSTEPFCGRFSLGQLGHLILIPEAAD
KGYQLDRYPYLCLAYRGHMNKTLDMTVSFLFGFQTIMKNITCDWSLTDPHPESWQFTCIN
LWDTCLCHSEDIQSSLANTPLLAHRIDIRPVVPEAGLLYVDEIILADTNVTVSQADSGRA
CPGGNVVESVSVVGVPPVYSISSWLAGCGSELPLITACSVSTEGTGDGSELIEVTAQRLQ
RTSPPLGGHFFLYLSDTVIPDVPVRMSARQLHKLLQDSADESTSGYLNAGDFTVTEDLNS
CYEHVWTLSWTTQTGDLPNFIRVSDQNLTGVNPTVTARVVYDGGVFLGPIFGDMLATANQ
QTQVAVQVNDIPAYCSGSCSFQYQQESTPSVDHVWYSLGSDVNLLVHFTGTGFPRDTQFL
QVTVNKTSCEVLFSNETNVACELALLPVGVHQIFMLVIPSGLAVHASGEDLLLHVEPRLD
AVEPSTAAEIGGRWVTLRGSSLEGVSLVLFGTQSCVIDAIRSNSQQIQCKVPPRGKDGYT
VNVTVISGDHSTVLARAFTYVSSLNPVIVSLSRNRSSIAGGEILFLGMSLLVNYTDLDVQ
IHVQDTSAQVLSQTAWGLEVVLPPLVPGIHVISAFINGVSIRSQGVDLYIQYLTEVFSVE
PCSGSLLGGTLLSLLGTGLGRDPALIRVLVDNHPCDIVNLTEVNIWCETPPAVLPPRADV
LTVLASVEIWAGNTSFFHGPSLVGKGFTFTYEAAATPVVTAMWGEFRNNSVRFYVEGSNI
SDSVILLGSLKCELEVQFFGDSMNLSGCFFPLHSLEAGVYTLQVRHKRMGFANMSVVPQK
FELSPQIIAIFPTHGSKCGGTVLTVKGMAFSSRKRSVHVDISGPFACMILSLEDHTVLCQ
TRFVGDQFSEASLALNITVLVNGLTSKCKGNCTLFIEEAATPIVDALTISISGSLTMVLM
RGRRLATTADEPIAFVDDQLPCHTTFFNTSHVACQIRDLAPGFHYLSAVHTSAGYACLNS
VSRNFFIVPQVLDYFPKDFSIHGGSLLTIKGTALRGWKATVVYVGRQACLTVNFSSDFIQ
CIVPAGNGSAALEIDVNGVLYHIGLVDYSSIFTPELLSVSRSQDILTFTVARISGAANVD
IFIGTSPCLGVAGNRTVLQCMVPLLPAGEYLVTGYDHSRGWASSTLILVLRATVTSVTKN
YGCLGGRLLHVLGAGFSPGNISAAVCGAPCQVLANATVSAFSCLVLPLHVSLAFLCDLRH
AEDSCKVRSSTYLRCDLTVSMGTERLPGSWPYVYLCEESSLCLFEPDHWTESVFPSFSGL
FLSPKVERDEVLIYNSSCNITMETEAEMECEMPNQPITAKITEIQKSWGQNTQGNFSFQF
CRRWSRPHSWFPQRVPHDGDSVTVETGHLLLLDANTSFLNSLHIKGGKLIFMDPGPIELR
AHSILITDGGELHIGSEEKPFQGKARIKIYGSVHSTPFFPYGVKFLAVRNGTLSLHGSVP
EVTVTYLQAAAHAGDKVLTLGEAVDWKPGDEAVITSGMTVAGAEATEVVVVETVHNADLH
LRNPLRYSYDFRENWVAGENPILKPTVALLSRNIIIQGNFTLERVKLLNSCQEANTAKGN
LKHCLYSKSEKMLGARDLGARVIIQSFPEEPSFVKLKGVQFRDLGQAFHKHLSSLALVGA
MRGSYIQSCSVWNSFSRGLSMHRTWGLKVDSNVFYKIVGHALLLGSYLDGRFSTSETVTG
RKNGWWEQGSTIRNNVIISVSAAEGLSGSEMLAPAGIYTFSPTNVMEGNRVCAAGYGYVF
HLVTSQTLQAPLLSFNWNTAHSCTRYGLLVYPKFQPPWNNDTGFTLFQNFMVWGSAGGAQ
IFRSNNLHLKNFQVYACRDFGIDILESDANTLITDSFLLGHFTHKGSLCMSAGIKTPQRW
ELTISNTTFVNFDGNCVAIRTCSGCFQGQGGYTVKTRQLKFVNSSNLVAFPFPHAAVLED
LDGSLSGKNGSHVLASMETLSDTCLTNASFSQIVPGSVCGEAVLFHRMSIALANSLDVPK
NLTITDISNKTITVNYVEDTLSNYYGWMALLLDQETYSLQFESPWMNRSLQYSATFDSFA
PGNYLLIMHRDLPPYPDILLRCGSQVGHSLPFHPLPSQDRACDWFFNRQLRQLTYLVSGE
GQVKVFLQLKPGVPPSVSASTSVPESASRWSLPETWQDVEKGWGGYNHTIPGPGDDVLIL
PNKTVLVDTDLPVLRCLYVMGTLEFPVDRSNVLSVACLLIAGGELKVGTLENPLEKDQRL
LIFLRASEEVVCDYFEGIHVDPGTIGVYGKLRLHSAYPKKSWVHLGADIAPGNERIIVHN
AVDWQPHDTIVLSSSSYEAHEAEVLTVKEVKGHHIRIYERLKHRHIGSTHTMEDGQQVHL
AAEVGLLTRNIRIQPDSSCRGRLLVGSFRKSSGEDFSGVLQLLNVEIQNMGLPLYSSIEF
TGVSAGSWVISSTVHQSCSVGIHASSSHGVILTDNVVFGTNGHGIDVEGQNYSLTNNLVI
LTMQSANSSPWVAGIKVNYAEDIILHGNVVAGSERLGFHVGGHGCSSEVLWSDNVVHSSL
HGLHLYKKHESNNCTGVSGFMAFKNFDYGAMVQTENSVDIQNITLVDNTVGLLAITYVSS
ALLSSVSTVQITLRNSVIVATSSSFDCIHDRKAPQSANWTSTDRAPSNPRGGRIGILWPV
SASEPNAWPQEPWHKVRSRHSVPGIMKLQDVTFSSFVKSCYSNDLDVCILPNEYSTGVMY
PITAERTRMLGIKDKNKFYFPVLQSSKDLVGTICPTLVCEYPRKYLFTDLDGRTLGLPPP
VSVFPRTEEEWTGSFLNTGIFREEQKCTFRAMNQGFFCKQTEHAVLILDNVDATWTIPKS
HPLVSVTNGFVDTFSIVKDSDLCPPTSSLSTFYSILPTRQMTKVCFPEQTPPFLRFLLLG
NQRASKLILAVFYNEIQSPHVFLDKSFIPPTPLESAFSLLAEPSGANYFDIMNNLLYVVL
QGEEPVEIHSSVSIHLALTVTFSVLEKGWERAMLESLSDFFQIDPNQIRLTLEMPGNKET
LEAIANSERKRKRNCPSVTCGGPSIRYGQRRPLMAEMTSLKITPATTLETFSKVIVIEVG
DLPNIRNSEPIQSLPSNRLQRLVNQVITAQQTGALENVLGMTVGALLVTQSKGVTGYRNA
SSLITGNLIYTRPSELSILVQPSDGEVGIELPVQPRLVFLDEKNERVESLGLPSEPWIIS
VSLEGASESVLKGCTLAETRDGYVTFSRLAVLISGSNWHLFFTVISPPGTNFTARSRTFV
VLPVASKERSTIILALSLCSVASWVALSCLVCCWFKKSKTRKIKPEDISESQAKEQKKNT
HNSSKPRGLQAKTAKENTLMGEDMRMKVMQGMQSQFPQHSMDGVSKRKVSRLAVTEERTT
TPAPKIPRITCVPGSLAQQLTLQEPGNWQEAQQQLLRYQLAGRNQLLLLRPDLRQERKQG
QEPSQLDKGSDCTGLSQEKATCIPTETFSLHTAPPETIQ*
MSMv4 transcript
MMLAWLVSLLSMEVLLLAKPYSSFQFEPAEGSLAGGTWITVVFDGLDRSILYPNNGSQLQ
IDLVSVAIPTLRIPCDVSPVFVDLPVVTCQTRSLPSEADAGPYSLEIRSGEQVLGTPCPG
SLNSCTFKFSKDQTPVLYQVYPASGVPGEVVSVYGRVITTWLETFDPDVDYIESPLILEA
GEDKWLTPCSLINRQTGSCFPIQEEHGLGNVQCRVEGDYIGSQNVSFSVFNKGRSMVHKE
AWLISAKQELFLYQTYPEILSVFPKVGSLGGRTDIIITGDFFDPSARVTIAGIPCDIRYV
SPRKIECTTRAPGNEARLTAPQAGNRGLRFEVGDATKDVELTEATPGYRWQIVPNASSPS
GFWSKEGRPFRARLSGFFMAPQTNNYTFWIQADSQASLCFSSSEEPRTKVEVASVGVGTA
DWFDSWEQIGNEGSWHQKTTKLELQGGAKYYLEAEQHGIAPSRGMRIGVQIHNTWLNPDV
VNTYLLEKHQIRALAQRLPEIQVLHVSGKGNFFLTWGNVSSQPVPANATAQQIQTTIEEL
LVVKCNLAPFSARVLLRLGFEQGLEGSRSDGVRTSSTEPFCGRFSLGQLGHLILIPEAAD
KGYQPDRYPYLCLAYRGHMNKTLDMTVSFLFGFQTIMKNITCDLSLTDPHPESWQFTCIN
LWDTCLCHSEDLQSSLANTPLLAHRIDIRPVVPEAGLLYVDEIILADTNVTVSQADSGRA
CPGGNVVESVSVVGVPPVYSITSWLAGCGSELPLITACSVSTEGTGDGSELIEVTAQRLQ
RTSPPLGGHFFLYLSDTVIPDVPVRMSARQLHKLLQDSADESTSGYLNAGDFTVTEDLNS
CYEHVWTLSWTTQIGDLPNFIRVSDQNLTGVNPTVTARVVYDGGVFLQPIFGDMLATANQ
QTQVAVQVNDIPAYCSGSCSFQYQQESTPSVDHVWYSLGSDVNLLVHFTGTGFPRDTQFL
QVTVNKTSCEVLFSNETNVACELALLPVGVHQIFMLVIPSGLAVNASGEDLLLHVEPRLD
AVEPSTAAEIGGQWVTLRGSSLEGVSLVLFGTQSCVIDAIRSNSQQIQCKVPPRGEDGYT
VNVTVISGDHSIVLARAFTYVSSLNPVIVSLSRNRSSIAGGEILFLGMSLLVNYTDLDVQ
IHVQDTSAQVLSQTAWGLEVVLPPLVPGIHAISAFINGVSIRSQGVDLYIQYLTEVFSVE
PCSGSLLGGTLLSLLGTGLGRDPALIRVLVDNHPCDIVNLTEVNIWCETPPAVLPPSADV
LTVPASLEIWAGNTSFFHGPSLVGKGFTFTYEAAATPVVTAMWGEFRNNSVRFYVEGSNI
SDSVILLGSLKCELEVQFFGDSMNLSGCFFPLHSLEAGVYTLQVRHKRMGFANMSVVPQK
FELSPQIIAIFPTHGSKCGGTVLTVKGMAFSSRKRSVHVDISGPFACMILSLEDHTVLCQ
TRFVGDQFSEASLALNITVLVNGLTSKCKGNCTLFIEEAATPIVDALTISISGSLTMVLM
RGRRLATTADEPIAFVDDQLPCHTTFFNTSHVACQIRDLAPGFHYLSAVHTSAGYACLNS
VSRNFFIVPQVLDYFPKDFSIHGGSLLTIKGTALRGWKATVVYVGRQACLTVNFSSDFIQ
CIVPAGNGSAALEIDVDGVLYHIGLVDYSSIFTPELLSVSRSQDILTFTVARISGAANVD
IFIGTSPCLGVAGNRTVLQCMVPLLRAGEYLVTGYDHSRGWASSTLILVLRATVTSVTKN
YGCLGGRLLHVLGAGFSPGNISAAVCGAPCQVLANATVSAFSCLVLPLDVSLAFLCDLRH
AEDSCKVRSSTYLRCDLTVSMGTERLPGSWPYVYLCEESSLCLFEPDHWTESVFPSFSGL
FLSPKVERDEVLIYNSSCNITMETEAEMECEMPNQPITAKITEIQKSWGQNTQGNFSFQF
CRRWSRPHSWFPQRVPHDGDSVTVETGHLLLLDANTSFLNSLHIKGGKLIFMDPGPIELR
AHSILITDGGELHIGSEEKPFQGKARIKIYGSVHSTPFFPYGVKFLAVRNGTLSLHGSVP
EVTVTYLQAAAHAGDKVLTLGEAVDWKPGDEAVITSGMTVEGAEATEVVVVETVHNADLH
LRNALRYSYNFRENWVAGENPILKPTVALLSRNIIIQGNLTRERVKLLNSCQEANTAKGN
LKHCLYSKSEKMLGARDLGARVIIQSFPEEPSFVKLKGVQFRDLGQAFHKHLSSLALVGA
MRGSYIQSCSVWNSFSRGLSMHRTWGLKVDSNIFYKIVGHALLLGSYLDGRFSTSETVTG
RKNGWWEQGSTIRNNVIISVSAAEGLSGSEMLAPAGIYTFSPTNVIEGNRVCAAGYGYVF
HLVTSQTLQAPLLSFNWNTAHSCTRYGLLVYPKFQPPWNNDTGFTLFQNFMVWGSAGGAQ
IFRSNNLHLKNFQVYACRDFGIDILESDANTLITDSFLLGHFTHKGSLCMSAGIKTPQRW
ELTISNTTFVNFDGNCVAIRTCSGCFQGQGGYTVKSRQLKFVNSSNLVAFPFPHAAVLED
LDGSLAGKNGSHVLASMETLSDTCLTNASFSQIVPGSVCGEAVLFHRMSIALANSLDVPK
NLTITDISNKTITVNYVEDTLSNYYGWMALLLDQETYSLQFESPWMNRSLQYSATFDSFA
PGNYLLIMHRDLPPYPDILLRCESQVGQSLPFHPLPSQDRACDWFFNRQLRQLTYLVSGE
GQVKVFLQLKPGVPPSVSASTSLPESASRWSLPETWQDVEKGWGGYNHTIPGPGDDVLIL
PNKTVLVDTELPVLRCLYVMGTLEFPVDRSNVLSVACLLIAGGELKVGTLENPLEKDQRL
LIFLRASEEVICDYFEGIHVDPGTIGVYGKLRLHSAYPKKSWVHLGADIAPGNERIIVHN
AVDWQPHDTIVLSSSSYEAHEAEVLTVKEVKGHHIRIYERLKHRHIGSTHIMEDGQQVHL
AAEVGLLTRNIRIQPDSSCRGRLLVGSFRKSSGEDFSGVLQLLNVEIQNMGLPLYSSIEF
TGVSAGSWVISSTVHQSCSVGIHASSSHGVILTDNVVFGTNGHGIDVEGQNYFLTNNLVI
LTMQSANSSPWVAGIKVNYAEDIILHGNVVAGSERLGFHVGGHGCSSEVLWSDNVVHSSL
HGLHLYKKHESNNCTGVSGFMAFKNFDYGAMVQTENSVDIQNITLVDNTVGLLAITYVSS
ALLSSVSTVQITLRNSVIVATSSSFDCIHDRKAPQSANWTSTDRAPSNPRGGRIGILWPV
SASEPNAWPQEPWHKVRSHHSVPGIMKLQDVTFSSFVKSCYSNDLDVCILPNEYSTGVMY
PITAERTRMLGIKDKNKFYFPVLQSSKDLVGTICPTLVCEYPRKYLFTDLDGRTLGLPPP
VSVFPRTEEEWTGSFLNTGIFREEQKCTFRAMNQGFFCKQTEHAVLILDNVDATWPIPKS
HPLVSVTNGFVDTFSIVKDSDLCSPTSSLSTFYSILPTRQMTKVCFPEQTPPFLRFLLLG
NQRASKLILAVFYNEIQSPHVFLDKSFIPPTPLESAFSLLAEPSGANYFDIMNNLLYVVL
QGEEPVEIHSSVSIHFALTVTFSVLEKGWERAMLESLTDFFQIDPNQIRLTLEMPGNKET
LEAIANSEGKRKRNCPSVTCGDPSIRYGQRRPLMAEMTSLKITPATTLETFSKVIVIEVG
DPPNIRNSEPIQALPSNRLQRLVNQVITAQQTGALENVLGMTVGALLVTQSKGVTGYRNA
SSLITGNLIYTRPSELSILVQPSDGEVGIELPVQPRLVFLDEKNERVESLGLPSEPWIIS
VSLEGASESVLKGCTLAETRDGYVTFSRLAVLISGSNWHLFFTVISPPGTNFTARSRTFV
VLPVASKERSTIILALSLCSVASWVALSCLICCWFKKSKTRKIKPEDISESQAKEQKKNT
HNSSKPRGLQAKTAKENTLMGEDMRMKVMQGMQSQFPQHSMDGVSKRKVSRLAVTEERTA
TPAPKIPRITCVPGSLAQQLALQEPGNWQEAQQQLLRYQLAGRNQLLLLRPDLRQERKQG
QEPSQLDKGSDCTGLSQKKATCIPTETFGLHTAPPETIQ*
homology98.67 (4060 / 4060)

Exon Detail Report

Target Strain  MSMv4  JF1v3  KJRv1  SWNv1  CHDv1  NJLv1  BLG2v1  HMIv1  BFMv1  PGN2v1
Gene Symbol (Gene ID) Pkhd1 (ENSMUSG00000043760)
Transcript ID ENSMUST00000088448
No. Exon / Intron Start End Start Phase End Phase Length Sequence
5' upstream sequence
..........TTTCAAAGTAAGGAAAGGGGAAAAGCTCAAACCAGAAGTGGCCCCAGGCA
TTCTCAGTTTCAATATTTTGCTTTCATTGCCTAGGTCTATTTCAAATATATCCCTAATAT
AATCCACGTTATGGATGCGTCTACTCTATAGAAAGCACAGTGCAATCTATTTGGGTTTAT
AGAAGAATAAACATAGTATTTTTCCCCTAAGTGATGTACACAGAGTTCTGGGAATAGCTT
ATATAAGTCAGACACTATTGAGCAGCTCAACCCTGCTGAATCATTTAGCAAGGTACACTC
AAGTTTTGATGACTGTGAACTGTATATTGCCAATACGGGAACTTAGTTATCTCTTAGAGT
ATATATAACCTTAGAGTCCTACTAAGAAATAGAAGGCATATTTGAGATAAAAAATTATTA
AAGGGATTAGTTCTAGAAGGGCAGCCAAGATTTAGAAAAGGCATAAAGGGGTGGTATTAA
AAACTTGCAAGCTAGCAATAGTATAAGCTGTTAGTAGCCTTGGCCTGAAGATGCACACAA
AGGAAATATATCTGAACCTGCAGAAAAAGCAAGCACAAGACAGCAACAGTATTCCATGAA
GGAAATGATCTACTCTAGTGACCTTTGAACCCCAGGCTGTGCCATATTTTTGAAACCAAT
AAGACATCAAGTGTAGTGGACCACCACTGAAAGCCCATAGCATAGGGTGCAGGATCAGGC
AGAGAGCACTCATGGAGCATGTAAGTTCCTGCTGGGGTCTCTGCTCACTGGCTGTCTTTC
TGGCACCTCCTTTCAGTTACTGAGTGCCCACTGGTCACACTGGCTAGACTATTTTTTTCT
TTTCTTTTCTTTTTTTTTTTTTAATTCTTGTCTGAGACACATGCAGTAAGTGGAGAAAAA
TGTAAGCAGCCCTTTCTTTGGGTCTCTAAGTAGCTCGCGTTAATTATTAAACTTGCCCTG
TGGTCATTTGTGAACTTTCACTCTGGTGCACGTTTAGCCAGGACACAAGC
1 EXON 1 20,617,911 20,618,064 - - 154
GAGTTAGGTGAGTTCCAGTCCAACAGGAAGTGAGCTACCTGCATCTTAGCTAGCTAGCTA
GCTAGCTGCAGGCTGGCCTGTCACCGAATAACGCGGCTTCGTTTAGAAGGGGATGGTTTC
TCTCATTTGAGGCACAAGGCTGACACAGCATCAG
INTRON 1 - 2 20,615,406 20,617,910 2,505
GTACTGTTTGATTCAGAAAAAGACT..........TTTTTTCCACTTTATGTTTTATAAG
2 EXON 2 20,615,269 20,615,405 - 1 137
GCACAAAAACTACATGGCGCCAATCAACCCTAAAAATGCTTCTAATATCTGAGGAATCTC
AAGAGAGCTGAGCTAACTGGACATGATGCTTGCCTGGCTGGTCTCTCTGCTGAGTATGGA
AGTACTACTGTTAGCAA
INTRON 2 - 3 20,613,473 20,615,268 1,796
GTAAGTATAAAGTGTTTGAACAGAG..........AACCGACATGTTCTCTGATTGATAG
3 EXON 3 20,613,395 20,613,472 1 1 78
AGCCTTACTCGAGTTTCCAGTTTGAACCCGCAGAAGGTAGCCTTGCAGGGGGAACATGGA
TCACAGTTGTATTTGACG
INTRON 3 - 4 20,612,844 20,613,394 551
GTAGGTTTGGGCTTTTCTGAATTTG..........GCCTGAGATTTCTCCTTGTGTTTAG
4 EXON 4 20,612,702 20,612,843 1 2 142
GTTTGGATAGAAGTATTCTTTACCCCAACAATGGCTCTCAGCTGCAGATAGACCTGGTGA
GTGTGGCAATACCTACCTTGAGGATCCCCTGTGACGTCTCTCCGGTCTTCGTGGATTTGC
CTGTGGTGACATGCCAGACGAG
INTRON 4 - 5 20,608,428 20,612,701 4,274
GTACACTTGCCTAAAGTATAAAACC..........AAAGATTTCCATTTTCTGTCCCTAG
5 EXON 5 20,608,319 20,608,427 2 0 109
GTCTCTTCCATCAGAAGCAGATGCAGGGCCATACTCCCTGGAAATACGCTCTGGGGAGCA
AGTGCTAGGCACTCCATGTCCTGGATCACTAAACAGCTGTACTTTCAAG
INTRON 5 - 6 20,593,969 20,608,318 14,350
GTGGGTTCTTAGGATAGAGGAATGT..........ACATGTGATAATACTTTCTAAACAG
6 EXON 6 20,593,911 20,593,968 0 1 58
TTTTCCAAGGATCAGACACCTGTTTTATATCAAGTTTACCCAGCAAGTGGAGTTCCAG
INTRON 6 - 7 20,588,564 20,593,910 5,347
GTAAGAAATCTTCTATTAAATATAA..........TTTGAGCTAACTCTTCTTAAAACAG
7 EXON 7 20,588,485 20,588,563 1 2 79
GAGAAGTAGTGTCCGTGTACGGCCGGGTCATCACTACCTGGCTGGAGACCTTCGATCCTG
ATGTGGACTACATAGAGAG
INTRON 7 - 8 20,586,899 20,588,484 1,586
GTAAGGATGTGTTTGTTCCTGTGTT..........TTTTTTTTTTTGCCCTCCAATCCAG
8 EXON 8 20,586,824 20,586,898 2 2 75
CCCATTGATCCTAGAAGCTGGAGAAGACAAATGGCTTACTCCCTGTTCCCTTATAAACAG
GCAGACAGGAAGCTG
INTRON 8 - 9 20,585,712 20,586,823 1,112
GTGAGTATTTTTGTTGTTGCTGTTA..........TACTTCTGTATGTTTTTTTCCACAG
9 EXON 9 20,585,647 20,585,711 2 1 65
TTTTCCCATCCAGGAGGAGCATGGCCTTGGGAATGTGCAGTGTCGTGTGGAAGGCGATTA
TATTG
INTRON 9 - 10 20,585,198 20,585,646 449
GTCTGTTTTACAAGTGCCATTTAAA..........TACTGTGTGTGTTTTTGTGTTTCAG
10 EXON 10 20,585,158 20,585,197 1 2 40
GTTCTCAGAATGTTAGTTTTTCAGTATTTAACAAAGGGAG
INTRON 10 - 11 20,584,131 20,585,157 1,027
GTGAGTAACTGGGATAGACAAATCT..........TATTTTCCTTTGTTTTCCTTTGGAG
11 EXON 11 20,584,060 20,584,130 2 1 71
GTCGATGGTGCATAAGGAAGCCTGGCTCATCAGTGCTAAACAGGAACTGTTCCTGTACCA
GACATACCCAG
INTRON 11 - 12 20,571,441 20,584,059 12,619
GTACTCTTTCCCTTCATCCTGTCTT..........CTCCCATTTTTATATACTCTTGCAG
12 EXON 12 20,571,339 20,571,440 1 1 102
AAATCTTATCCGTGTTTCCAAAAGTTGGGAGCCTTGGGGGAAGAACGGACATCATCATTA
CGGGAGATTTCTTTGACCCTTCTGCCCGGGTTACCATTGCAG
INTRON 12 - 13 20,569,925 20,571,338 1,414
GTAATTATGCTAAAATAAAATGGTT..........TATAGGTTTTAAAAATTCTCCTTAG
13 EXON 13 20,569,829 20,569,924 1 1 96
GCATCCCATGTGATATTAGATATGTGTCTCCCAGGAAGATTGAGTGCACTACCAGGGCTC
CAGGAAATGAAGCAAGGCTCACTGCTCCTCAGGCAG
INTRON 13 - 14 20,567,590 20,569,828 2,239
GTAAGGAAATCACTAGGGCTGCACA..........GTTATGGGGTATATATATCTTACAG
14 EXON 14 20,567,448 20,567,589 1 2 142
GCAATCGAGGACTCCGTTTTGAAGTTGGAGATGCTACTAAGGATGTGGAGCTGACTGAAG
CCACCCCAGGGTACAGGTGGCAGATAGTTCCTAATGCCAGTTCTCCATCTGGCTTTTGGT
CAAAGGAAGGGAGACCTTTCAG
INTRON 14 - 15 20,566,873 20,567,447 575
GTATGTTATAGACTGGGAATCTATA..........GATTCTGTGTTCTTCTATGTTACAG
15 EXON 15 20,566,758 20,566,872 2 0 115
AGCACGGCTCAGTGGGTTCTTCATGGCGCCACAGACAAACAATTACACATTCTGGATCCA
GGCAGACAGCCAAGCTTCCTTGTGTTTCAGTTCTTCAGAGGAGCCAAGGACCAAG
INTRON 15 - 16 20,565,878 20,566,757 880
GTACTCACCTTCTCTGGGTTACCTT..........CCCTGATTTGCTTATTTGGGCACAG
16 EXON 16 20,565,599 20,565,877 0 0 279
GTAGAAGTGGCCTCTGTTGGGGTTGGCACTGCTGACTGGTTTGACTCTTGGGAGCAGATC
GGGAATGAAGGGAGCTGGCACCAGAAGACAACCAAGCTAGAACTGCAGGGCGGAGCCAAG
TACTACTTGGAAGCAGAGCAGCATGGGATAGCTCCCAGCAGAGGGATGAGAATTGGTGTC
CAGATTCACAACACCTGGCTGAATCCAGATGTGGTCAACACTTACCTTCTGGAGAAACAC
CAGATCCGAGCTCTAGCCCAGAGACTTCCAGAAATACAG
INTRON 16 - 17 20,563,891 20,565,598 1,708
GTCTGTGTGTCTTTCCAGTCCCAGG..........AACTTTGTATCTCTTGACTTTTTAG
17 EXON 17 20,563,801 20,563,890 0 0 90
GTGTTGCATGTGTCAGGTAAAGGAAACTTTTTCCTTACTTGGGGCAATGTCTCCAGCCAA
CCAGTTCCTGCAAATGCCACAGCCCAACAG
INTRON 17 - 18 20,563,714 20,563,800 87
GTGAGGGTCTTCTTCCAAAAACGAA..........ACTGCATTTTTATTCATCTTGATAG
18 EXON 18 20,563,623 20,563,713 0 1 91
ATCCAAACCACCATTGAAGAGTTGCTTGTGGTGAAATGCAATCTGGCACCGTTTTCGGCC
CGTGTTCTTCTCCGGCTTGGATTTGAGCAAG
INTRON 18 - 19 20,562,503 20,563,622 1,120
GTGGCTCCTCTGTTGACAAGTTCTG..........TTCTATGCATTTGCATTATATATAG
19 EXON 19 20,562,360 20,562,502 1 0 143
GCTTAGAAGGCTCCAGGTCTGATGGGGTCCGCACCAGTTCAACTGAACCCTTCTGTGGCA
GATTCAGCCTTGGTCAACTTGGACATCTTATCCTAATTCCAGAGGCTGCCGACAAGGGCT
ATCAGCCGGATCGATACCCGTAT
INTRON 19 - 20 20,559,549 20,562,359 2,811
GTGAGTGTCTATCTTCATGTCTCTG..........TGAAGGGCATATTTGGTATCCACAG
20 EXON 20 20,559,421 20,559,548 0 2 128
CTGTGCCTTGCGTACAGAGGCCATATGAACAAGACCCTGGACATGACTGTTTCTTTCCTC
TTTGGCTTCCAAACTATCATGAAGAACATCACCTGTGACTTGAGTCTTACCGATCCCCAC
CCTGAGAG
INTRON 20 - 21 20,558,764 20,559,420 657
GTAACCATGTGGGAGAAGGTGGGAG..........GGCCCCTTCCACTCTGATTTGTCAG
21 EXON 21 20,558,588 20,558,763 2 1 176
CTGGCAGTTCACTTGCATTAACCTCTGGGACACATGTCTATGTCACTCTGAGGATCTCCA
GTCTTCTCTGGCAAACACCCCATTGCTGGCTCATCGGATTGACATCCGCCCCGTGGTTCC
GGAGGCAGGCCTGCTCTATGTGGATGAAATTATTCTTGCAGATACCAACGTAACAG
INTRON 21 - 22 20,555,217 20,558,587 3,371
GTGATCACCGCATCTGCTCTCCTCT..........CTATAATTGGATCCCTGGTTTCTAG
22 EXON 22 20,555,078 20,555,216 1 2 139
TTTCTCAAGCTGATTCTGGAAGAGCCTGCCCAGGTGGGAATGTGGTGGAGTCAGTATCGG
TGGTGGGAGTCCCTCCAGTCTACAGCATAACCTCCTGGTTGGCAGGATGTGGCTCAGAGC
TCCCTCTCATCACTGCATG
INTRON 22 - 23 20,553,597 20,555,077 1,481
GTAAGGAGTGGGTTTTCTACATGGG..........ATGCTTAGCTTTTGATCCACCACAG
23 EXON 23 20,553,469 20,553,596 2 1 128
CTCTGTGTCCACGGAGGGAACAGGAGATGGATCTGAATTGATTGAGGTGACAGCTCAAAG
ACTCCAGAGGACAAGCCCACCTTTGGGAGGACACTTCTTCCTTTACCTCTCTGACACAGT
GATACCTG
INTRON 23 - 24 20,551,032 20,553,468 2,437
GTAAAGGGGGATTCAGGGTACATGT..........TCTGCATCAAACCCTTGCCTCACAG
24 EXON 24 20,550,847 20,551,031 1 0 185
ATGTTCCGGTGCGCATGTCTGCCCGACAGCTGCATAAGCTACTGCAGGACAGTGCTGATG
AGTCCACATCTGGATATCTCAATGCCGGTGACTTCACTGTGACAGAGGATCTGAATTCCT
GCTATGAACATGTGTGGACTCTTTCTTGGACCACTCAGATTGGGGATTTGCCCAATTTTA
TCAGG
INTRON 24 - 25 20,549,809 20,550,846 1,038
GTAGGTATACTCAACCCTATTTGTT..........TTGACCAGAAATGTAACTATCTCAG
25 EXON 25 20,549,686 20,549,808 0 0 123
GTATCTGATCAAAATCTTACCGGGGTGAATCCCACTGTAACTGCTCGCGTGGTATATGAT
GGTGGAGTTTTCCTTCAACCCATCTTTGGAGACATGTTGGCTACTGCCAACCAGCAAACT
CAG
INTRON 25 - 26 20,548,197 20,549,685 1,489
GTGAGCGTGGCACCTAGCTCCAAAC..........TCATTCTCTTACCTCTGTCCCCCAG
26 EXON 26 20,548,091 20,548,196 0 1 106
GTGGCTGTACAGGTGAATGACATACCAGCCTATTGTTCAGGCTCCTGTTCTTTCCAATAC
CAGCAAGAGTCAACTCCCAGTGTGGATCATGTGTGGTACTCCCTTG
INTRON 26 - 27 20,547,545 20,548,090 546
GTATGATTTAGCTATGAAACTTAGA..........TTTCTCCCCCCCCCACCCCCTTTAG
27 EXON 27 20,547,269 20,547,544 1 1 276
GAAGCGATGTCAACTTGCTGGTTCATTTTACTGGAACTGGTTTCCCTAGAGACACCCAGT
TCTTACAGGTCACGGTGAACAAAACTAGCTGTGAAGTTCTTTTCTCAAATGAAACCAATG
TGGCCTGTGAGCTGGCTCTGCTACCAGTTGGAGTGCACCAGATTTTTATGCTGGTGATAC
CGTCAGGCCTTGCTGTTAATGCCAGTGGAGAAGACCTCCTCCTGCATGTGGAACCCAGGC
TGGATGCTGTGGAGCCTTCTACAGCTGCAGAGATTG
INTRON 27 - 28 20,540,445 20,547,268 6,824
GTAATATGGGCGGGGCTACACTGGA..........GTGAAAATGCTGTTTTTTGTTACAG
28 EXON 28 20,540,314 20,540,444 1 0 131
GAGGACAGTGGGTTACTCTCCGAGGCTCTAGTTTGGAAGGTGTTAGCCTGGTGTTATTTG
GAACTCAGTCATGTGTCATTGATGCCATTAGAAGCAATTCACAACAAATTCAGTGCAAAG
TCCCACCTAGG
INTRON 28 - 29 20,537,409 20,540,313 2,905
GTAAGAAGACTCTTTGCTATTGTAA..........TTTGAATTCTAAAATTGATTTTCAG
29 EXON 29 20,537,273 20,537,408 0 1 136
GGGGAAGATGGATACACTGTGAATGTGACTGTGATCAGTGGAGACCACTCTATTGTTCTT
GCCAGAGCATTTACATATGTCTCCTCTTTAAATCCAGTGATTGTGTCATTGAGCAGAAAC
AGAAGCAGCATAGCAG
INTRON 29 - 30 20,534,732 20,537,272 2,541
GTAAGATACCTGTTACTTCAAGCCT..........AGTAAATATATTCTTCTTGACATAG
30 EXON 30 20,534,536 20,534,731 1 2 196
GAGGTGAGATTCTGTTCCTTGGGATGTCACTGCTGGTGAACTACACAGATCTGGATGTGC
AAATCCATGTGCAGGATACTTCTGCTCAGGTCCTTTCACAGACAGCGTGGGGACTGGAGG
TAGTGTTGCCTCCACTAGTACCTGGCATCCATGCGATTTCAGCATTCATCAATGGAGTCA
GTATTCGTTCACAAGG
INTRON 30 - 31 20,533,911 20,534,535 625
GTAAGGTCAACACTGTGGTTGAACT..........TTCTAACACCACCCATCTTCTCTAG
31 EXON 31 20,533,843 20,533,910 2 1 68
GGTTGATCTCTATATCCAGTACCTCACTGAAGTTTTCAGCGTGGAACCTTGCTCTGGGTC
TCTCTTGG
INTRON 31 - 32 20,524,266 20,533,842 9,577
GTGAGTGATTCTGGCATTGCACATA..........TGTGTCTTTTATGTTTACACTTTAG
32 EXON 32 20,522,664 20,524,265 1 1 1,602
GTGGAACTCTCCTCAGTCTCTTAGGAACAGGACTGGGCAGAGACCCAGCTCTGATTCGGG
TGCTTGTGGACAATCATCCTTGTGATATTGTGAACTTAACGGAAGTTAACATTTGGTGTG
AGACTCCTCCAGCTGTACTACCACCCAGCGCAGATGTTCTCACTGTCCCAGCCTCTTTGG
AGATCTGGGCTGGCAACACTTCCTTCTTCCATGGACCAAGCTTGGTGGGGAAGGGCTTTA
CCTTCACATATGAAGCAGCAGCAACGCCAGTGGTCACTGCTATGTGGGGAGAATTCAGGA
ACAACAGTGTGAGGTTTTATGTGGAAGGAAGTAACATCTCTGACTCAGTCATTCTTTTGG
GGTCCTTGAAATGTGAACTTGAAGTACAATTTTTTGGTGATAGCATGAACCTGTCTGGGT
GCTTTTTTCCTCTCCATAGTTTGGAAGCCGGGGTCTATACTCTCCAAGTTCGTCACAAGA
GGATGGGGTTTGCCAATATGTCTGTGGTACCTCAGAAATTTGAGTTGTCACCTCAGATTA
TTGCCATCTTCCCAACACATGGGTCTAAATGTGGTGGGACAGTACTTACTGTGAAGGGCA
TGGCCTTCAGTTCCAGAAAGAGGTCAGTTCATGTTGACATTTCAGGCCCTTTTGCTTGCA
TGATTTTGAGTTTGGAAGACCACACAGTCCTATGCCAGACCAGATTTGTGGGTGACCAAT
TTTCTGAAGCATCACTGGCTCTAAACATCACAGTTCTGGTCAATGGGCTGACCAGCAAGT
GTAAGGGGAACTGTACACTCTTCATAGAGGAAGCAGCAACTCCTATTGTGGATGCTTTGA
CTATAAGCATCAGTGGGTCTCTAACCATGGTGCTGATGAGAGGCCGGAGGTTAGCTACCA
CTGCTGATGAGCCAATAGCATTTGTGGATGATCAACTTCCCTGCCACACAACGTTCTTCA
ATACCAGCCATGTGGCATGCCAGATAAGAGATTTGGCCCCAGGCTTCCACTATCTGTCAG
CTGTTCATACAAGTGCTGGATATGCTTGCCTCAATAGTGTTTCTAGAAACTTCTTCATTG
TGCCTCAGGTGCTTGATTATTTTCCTAAGGACTTTAGCATCCATGGTGGAAGTCTCTTGA
CGATAAAAGGCACAGCCCTGCGAGGATGGAAAGCTACAGTTGTCTATGTTGGCCGGCAGG
CTTGTCTAACAGTGAACTTCAGCTCTGACTTCATCCAGTGCATTGTTCCTGCAGGAAATG
GCTCTGCTGCTCTGGAAATTGATGTGGATGGAGTTTTATACCACATAGGACTTGTTGATT
ACAGCAGCATCTTCACCCCAGAATTGCTTTCTGTTTCACGGAGCCAAGACATCTTAACCT
TTACAGTGGCCCGGATTTCAGGGGCTGCAAATGTTGACATTTTTATTGGGACATCACCGT
GTCTAGGTGTTGCTGGCAACCGTACAGTTCTCCAGTGCATGGTCCCTTTGCTTCGTGCTG
GGGAGTATCTTGTCACAGGTTACGATCACAGCCGAGGGTGGGCCTCATCCACTCTCATTC
TTGTGCTGAGAGCCACTGTGACCTCAGTGACCAAGAACTATG
INTRON 32 - 33 20,520,298 20,522,663 2,366
GTAAGTAGAGAATATAAGACAGACT..........ATGCACCTGGGATTTGTCTCTGAAG
33 EXON 33 20,520,154 20,520,297 1 1 144
GTTGCCTGGGTGGAAGGCTTTTGCATGTGCTCGGCGCAGGATTTTCTCCAGGGAACATCT
CAGCTGCCGTATGTGGTGCTCCATGCCAAGTCTTGGCTAATGCGACAGTGTCTGCCTTCA
GCTGCTTGGTTCTGCCCCTGGATG
INTRON 33 - 34 20,509,113 20,520,153 11,041
GTAAGAAAAAACCCACATGTAAACA..........CCTAAACTCTTGGTGACTTTTCCAG
34 EXON 34 20,508,893 20,509,112 1 2 220
TGTCCTTGGCTTTCCTATGTGACCTGAGGCATGCAGAAGACAGCTGTAAAGTCAGGAGCT
CCACCTACTTGCGATGTGATTTGACTGTCTCCATGGGGACAGAGAGACTGCCTGGATCCT
GGCCTTATGTCTACCTTTGTGAAGAGAGTTCCCTGTGCCTCTTCGAACCAGATCACTGGA
CAGAGTCAGTCTTTCCATCGTTCTCAGGCCTCTTCCTCAG
INTRON 34 - 35 20,503,093 20,508,892 5,800
GTAGTTCCATCTCATCTGTCCTCTC..........CATTTAACCTCCCCTCTTGTTTCAG
35 EXON 35 20,502,942 20,503,092 2 0 151
CCCTAAAGTGGAAAGAGATGAAGTTCTCATCTATAATAGCTCCTGTAACATTACCATGGA
AACTGAGGCAGAGATGGAGTGTGAGATGCCTAATCAGCCAATTACCGCCAAGATTACTGA
AATACAGAAAAGCTGGGGCCAGAACACTCAG
INTRON 35 - 36 20,450,378 20,502,941 52,564
GTATAATCAAATCTTTTTTACAGAC..........CTAAATCTTTTTTTCTCTTTCCCAG
36 EXON 36 20,450,221 20,450,377 0 1 157
GGAAACTTTTCCTTCCAATTCTGCCGAAGGTGGTCCAGGCCTCACAGTTGGTTTCCTCAA
AGAGTGCCACACGATGGCGACAGTGTCACAGTGGAGACCGGTCACCTGCTACTGCTTGAT
GCGAACACTAGCTTCCTGAACTCCCTGCACATTAAAG
INTRON 36 - 37 20,414,434 20,450,220 35,787
GTCTGTGGCATTTGAACAGCAAGTA..........GACAGCTTGATTTTTTGTTTGTCAG
37 EXON 37 20,414,221 20,414,433 1 1 213
GTGGCAAGCTGATCTTCATGGATCCGGGACCCATTGAGCTCAGAGCCCACTCCATCCTTA
TTACAGATGGTGGAGAACTCCATATTGGATCTGAGGAAAAGCCTTTCCAAGGCAAAGCTC
GGATCAAAATCTATGGAAGTGTCCATTCCACTCCCTTCTTTCCCTATGGAGTCAAGTTCC
TAGCTGTGAGGAATGGAACTCTTTCCCTGCATG
INTRON 37 - 38 20,392,220 20,414,220 22,001
GTAAGTAGACCATACACACACACAC..........ACAAGTTTTCTCTTGGTGGCTTTAG
38 EXON 38 20,392,012 20,392,219 1 2 208
GTTCAGTTCCAGAGGTTACTGTCACCTATCTTCAAGCAGCTGCACATGCAGGAGACAAAG
TGTTGACTCTGGGGGAAGCTGTGGACTGGAAGCCTGGGGATGAGGCTGTCATTACCAGTG
GGATGACTGTAGAAGGAGCTGAAGCAACAGAAGTTGTTGTTGTAGAAACTGTCCACAATG
CAGACCTCCATCTCAGGAACGCCCTGAG
INTRON 38 - 39 20,391,623 20,392,011 389
GTACTCAAATTTCAGCTTGGATAGG..........CTTACTCTCTTATTTTTTTTTTCAG
39 EXON 39 20,391,465 20,391,622 2 1 158
ATATTCCTACAATTTCAGAGAGAACTGGGTAGCTGGAGAGAATCCTATTTTGAAGCCAAC
AGTTGCTCTCCTCAGCAGGAACATTATCATCCAAGGAAACCTCACTCGTGAGAGGGTAAA
GCTTCTCAATTCATGCCAGGAGGCCAACACTGCTAAAG
INTRON 39 - 40 20,381,595 20,391,464 9,870
GTAGAAATACAGTTTGATGCAAAAC..........CCCTGGACATCATTATTTGTTTCAG
40 EXON 40 20,381,403 20,381,594 1 1 192
GTAACTTGAAACACTGTTTGTATTCTAAGAGTGAGAAGATGCTGGGAGCCAGGGATCTGG
GGGCCAGAGTCATCATTCAGTCCTTCCCAGAGGAACCCAGCTTCGTCAAGCTGAAGGGAG
TGCAGTTCAGAGACCTGGGACAGGCCTTCCATAAGCACCTGAGCTCACTCGCACTGGTGG
GAGCTATGAGAG
INTRON 40 - 41 20,377,501 20,381,402 3,902
GTAGGGGGAGCAGCGTTGATCTCCC..........ATTTACGTTACTCTTTCCTATTCAG
41 EXON 41 20,377,375 20,377,500 1 1 126
GCTCTTATATCCAAAGCTGTTCAGTGTGGAACTCCTTCAGCAGAGGCCTTAGCATGCACA
GGACCTGGGGTCTGAAGGTGGACAGCAATATATTCTATAAGATTGTAGGGCATGCCCTGC
TGCTGG
INTRON 41 - 42 20,374,769 20,377,374 2,606
GTAAGTAAACTTGCTTGGTTAATGT..........AAGCAATATGATCTTCTGTTCGCAG
42 EXON 42 20,374,712 20,374,768 1 1 57
GGTCCTACCTGGACGGAAGGTTTAGCACTAGTGAGACTGTTACTGGAAGAAAAAATG
INTRON 42 - 43 20,373,987 20,374,711 725
GTAAATATGTAAACTTATTTTGAAT..........TTTGATTCATCTGTATTCAAACTAG
43 EXON 43 20,373,856 20,373,986 1 0 131
GTTGGTGGGAACAGGGAAGTACAATAAGAAACAATGTGATCATCAGTGTTTCTGCAGCTG
AGGGACTGTCCGGTTCTGAAATGTTGGCACCAGCTGGCATCTACACTTTCAGTCCCACCA
ATGTGATCGAG
INTRON 43 - 44 20,364,232 20,373,855 9,624
GTAAGAGCTTTGGTTCTACCAGGAG..........TTCAAATCCCCCTTAAATTCTGTAG
44 EXON 44 20,364,119 20,364,231 0 2 113
GGCAACAGAGTGTGTGCAGCTGGCTATGGATATGTCTTCCACCTTGTGACCAGCCAAACA
TTACAAGCTCCGCTCCTCTCATTCAATTGGAATACTGCTCATTCTTGTACAAG
INTRON 44 - 45 20,361,092 20,364,118 3,027
GTAATTCTGGGAAAACTTAACTACA..........CTTTCATTCTTGGCTGGATTTTTAG
45 EXON 45 20,360,986 20,361,091 2 0 106
ATATGGTCTCCTTGTATATCCTAAATTTCAACCACCTTGGAATAATGACACTGGCTTCAC
TCTGTTCCAAAACTTCATGGTTTGGGGAAGTGCTGGTGGTGCCCAG
INTRON 45 - 46 20,358,975 20,360,985 2,011
GTATGTTTTTTCTTAAAACATGCAT..........CATAACTTAGGATGTTATTTTATAG
46 EXON 46 20,358,840 20,358,974 0 0 135
ATTTTTAGAAGTAACAATCTACACCTGAAAAACTTCCAAGTTTATGCATGCAGAGATTTT
GGAATTGACATTTTGGAAAGTGATGCGAACACTTTGATTACCGACAGCTTTTTACTTGGT
CATTTCACCCACAAG
INTRON 46 - 47 20,350,546 20,358,839 8,294
GTAGGTGCCTTACTGAGGTATTTTT..........TTTCTTTCTTTTTAAAAATTCAAAG
47 EXON 47 20,350,413 20,350,545 0 1 133
GGAAGTCTATGTATGTCAGCTGGGATCAAAACTCCCCAAAGATGGGAACTGACCATTTCG
AACACAACTTTTGTTAATTTTGATGGCAACTGTGTGGCCATCAGAACCTGTTCTGGCTGT
TTCCAGGGACAGG
INTRON 47 - 48 20,347,458 20,350,412 2,955
GTAAGTTTGAACAGACAGGACCGAT..........TAACAGTCTATATTCTAATTTGCAG
48 EXON 48 20,347,211 20,347,457 1 2 247
GTGGCTATACTGTGAAGAGCAGGCAATTGAAGTTTGTAAACTCTTCAAATTTAGTAGCAT
TTCCATTTCCTCATGCGGCAGTTCTGGAAGACTTAGACGGGTCCCTGGCTGGGAAAAATG
GGTCGCATGTTCTTGCGTCTATGGAAACCCTCTCAGACACATGCTTGACCAATGCAAGCT
TCAGTCAGATTGTCCCTGGCAGCGTCTGTGGCGAAGCTGTTCTCTTCCATCGTATGTCTA
TTGCTCT
INTRON 48 - 49 20,312,211 20,347,210 35,000
GTAAGTAGAATCAACTATATTCCTT..........TCTTTTTCTTTTTTGTTCACTGTAG
49 EXON 49 20,312,033 20,312,210 2 0 178
AGCCAATAGCCTTGATGTTCCTAAGAATTTAACCATTACTGACATCAGTAATAAGACAAT
CACTGTCAATTATGTGGAAGACACCCTGTCTAACTACTACGGCTGGATGGCTCTGCTCTT
GGATCAAGAGACCTACTCGCTGCAGTTTGAGAGCCCTTGGATGAACAGATCTCTGCAG
INTRON 49 - 50 20,310,721 20,312,032 1,312
GTAACCCCGTACATTGATATTTCTT..........GGTTTTCGGTTCTCTCTCTCTTTAG
50 EXON 50 20,310,525 20,310,720 0 1 196
TACTCAGCAACGTTTGACAGCTTTGCCCCTGGAAATTACCTCCTGATAATGCACAGAGAC
CTACCACCTTATCCTGACATCCTCCTCAGATGTGAGAGTCAGGTGGGCCAGTCACTTCCA
TTTCATCCTTTGCCTAGTCAAGACAGAGCCTGTGATTGGTTCTTCAATAGGCAATTGAGG
CAGCTCACCTACCTGG
INTRON 50 - 51 20,288,262 20,310,524 22,263
GTAAGTGTCCATTTGCAGAGGTATC..........CTCATTTTTTTTTTTTAATGTTAAG
51 EXON 51 20,288,196 20,288,261 1 1 66
TTTCAGGTGAAGGTCAAGTTAAGGTATTTCTCCAACTGAAGCCTGGTGTACCTCCAAGTG
TTTCAG
INTRON 51 - 52 20,275,648 20,288,195 12,548
GTGAGTATAAACACTGAAGAGAATG..........TCTATATATTTCCTGTGTATTCCAG
52 EXON 52 20,275,519 20,275,647 1 1 129
CTTCTACATCACTACCTGAATCAGCTTCAAGATGGTCTCTTCCTGAAACATGGCAAGATG
TTGAAAAAGGCTGGGGAGGATACAACCACACCATCCCAGGACCCGGTGATGATGTCTTGA
TTTTACCCA
INTRON 52 - 53 20,239,439 20,275,518 36,080
GTGAGTGAAACCAGCCAGGAAAAGA..........TGAGTGATCTTTTTGTCTCCTGCAG
53 EXON 53 20,239,301 20,239,438 1 1 138
ACAAGACTGTTCTTGTGGATACTGAACTTCCAGTGCTTCGATGCCTCTATGTGATGGGTA
CCTTAGAATTCCCTGTGGACAGAAGCAACGTTCTGAGTGTGGCATGCTTACTCATTGCAG
GAGGGGAGCTGAAAGTAG
INTRON 53 - 54 20,222,973 20,239,300 16,328
GTGAGTAGATGCTGGGGTATTGGAT..........ATAGCTTACTTTGCTTTCTTAACAG
54 EXON 54 20,222,859 20,222,972 1 1 114
GCACTTTGGAAAACCCCTTAGAAAAGGACCAAAGACTTCTGATATTCCTTAGAGCCTCAG
AAGAAGTCATCTGTGACTATTTTGAAGGAATTCATGTTGACCCAGGAACAATTG
INTRON 54 - 55 20,220,127 20,222,858 2,732
GTAAGAGTTAAGTATGGTGTATGTT..........ATTTGTTGATTCTTTAATTTTTCAG
55 EXON 55 20,220,039 20,220,126 1 2 88
GAGTTTATGGGAAACTTCGCCTTCACAGTGCTTATCCTAAGAAATCCTGGGTACACCTTG
GAGCTGACATTGCACCGGGAAATGAGAG
INTRON 55 - 56 20,211,992 20,220,038 8,047
GTAAGAGTCAGGGACCTTTATTTGT..........TGACATCTGCTTTCTGAATTTACAG
56 EXON 56 20,211,837 20,211,991 2 1 155
GATTATTGTACACAATGCAGTGGATTGGCAGCCTCATGACACAATTGTCCTCAGTTCTTC
TTCTTATGAGGCTCATGAGGCAGAGGTCCTCACTGTGAAGGAAGTCAAGGGCCATCACAT
CAGGATCTATGAACGTCTAAAGCACAGGCACATTG
INTRON 56 - 57 20,209,314 20,211,836 2,523
GTATGACTTTGATTTAGTTCATGCT..........TTTCCGCTGACTCCTGTTTCTCTAG
57 EXON 57 20,209,161 20,209,313 1 1 153
GAAGTACCCACATCATGGAGGATGGTCAACAGGTTCATTTGGCTGCTGAGGTTGGGCTGT
TGACCAGAAACATTAGAATTCAGCCTGACTCATCCTGTAGAGGGAGACTCCTTGTGGGGT
CCTTCAGGAAGTCTAGCGGAGAAGACTTTTCTG
INTRON 57 - 58 20,201,396 20,209,160 7,765
GTAAGTGACAAATGAAACCTACAAT..........TGAATATATCCGTTTTCCTTTGCAG
58 EXON 58 20,200,520 20,201,395 1 1 876
GTGTTCTTCAACTTCTCAATGTAGAAATTCAGAACATGGGGTTGCCATTGTATTCATCTA
TTGAATTCACTGGTGTATCAGCTGGATCCTGGGTAATATCTTCTACTGTGCATCAAAGCT
GCAGTGTGGGCATCCATGCATCTTCCAGCCATGGGGTGATTTTAACTGATAATGTAGTGT
TTGGTACAAATGGCCATGGCATCGATGTGGAGGGTCAGAACTATTTTCTCACCAATAACC
TTGTCATTCTGACAATGCAGTCAGCAAACTCATCTCCTTGGGTGGCAGGAATCAAAGTGA
ACTATGCAGAGGACATCATTCTCCATGGCAATGTGGTGGCAGGATCTGAGAGACTTGGCT
TTCATGTCGGTGGTCATGGGTGCTCCTCTGAAGTGCTTTGGTCTGACAATGTGGTCCACT
CAAGCCTCCATGGCCTTCACCTCTACAAGAAACATGAATCCAATAACTGTACTGGTGTCT
CTGGATTTATGGCTTTTAAGAACTTTGACTATGGTGCCATGGTTCAGACAGAGAATAGTG
TGGACATACAGAATATCACTCTGGTAGACAATACTGTTGGTCTTTTGGCTATCACATATG
TATCTTCTGCTCTCCTGAGCTCTGTCAGTACTGTACAGATTACACTTAGGAATTCAGTCA
TTGTGGCCACTAGCTCCTCTTTTGACTGCATCCACGACAGAAAGGCTCCTCAGTCAGCCA
ACTGGACATCAACAGATAGAGCACCTTCCAATCCCAGAGGAGGCCGAATTGGTATTCTGT
GGCCTGTTTCTGCCTCAGAACCAAATGCATGGCCCCAGGAGCCATGGCACAAAGTAAGGA
GCCATCATTCAGTCCCAGGAATTATGAAGCTTCAAG
INTRON 58 - 59 20,199,511 20,200,519 1,009
GTAGGATTCTTGACTTTGCCCTAAA..........CATGATATATTGTTTAAAATTTCAG
59 EXON 59 20,199,342 20,199,510 1 2 169
ATGTCACCTTTTCTAGTTTTGTGAAGAGTTGCTATAGCAACGACCTGGATGTCTGCATTC
TGCCTAATGAGTATAGCACTGGAGTCATGTACCCAATAACAGCAGAGAGGACCAGAATGC
TGGGGATAAAGGACAAAAACAAGTTCTACTTTCCTGTATTACAGTCCAG
INTRON 59 - 60 20,198,176 20,199,341 1,166
GTACCACTTTCAGTATTGATGATAT..........TGTTACCCTTTCCCTTTCTCCACAG
60 EXON 60 20,198,018 20,198,175 2 1 158
CAAAGACTTAGTGGGAACCATTTGTCCCACATTGGTCTGTGAATATCCAAGAAAATACCT
CTTCACAGATCTTGATGGGAGAACACTGGGTCTACCCCCACCAGTTTCTGTGTTTCCAAG
GACAGAGGAAGAGTGGACTGGATCGTTCCTCAATACAG
INTRON 60 - 61 20,117,948 20,198,017 80,070
GTGGGTTATGTCTGACCACGATGTG..........CTCATTTGTTTCCTTTGCTTCACAG
61 EXON 61 20,116,930 20,117,947 1 2 1,018
GTATATTCAGAGAAGAACAGAAATGCACATTCCGAGCGATGAACCAGGGCTTCTTCTGTA
AGCAGACTGAGCATGCGGTCCTAATTCTTGATAATGTTGATGCAACTTGGCCAATCCCCA
AATCACACCCACTTGTATCTGTTACTAATGGCTTTGTGGACACATTTAGCATTGTGAAGG
ACAGTGATTTATGCTCTCCCACAAGCTCTCTGTCTACTTTTTATTCCATCTTGCCCACCA
GACAAATGACCAAAGTATGCTTTCCAGAGCAAACTCCTCCATTCCTGCGTTTTCTTCTAT
TGGGAAACCAAAGAGCCTCCAAGCTCATCTTGGCTGTATTCTACAATGAGATTCAGAGCC
CTCACGTTTTCTTAGACAAGAGCTTTATTCCACCTACTCCATTAGAGTCAGCATTTTCAT
TGTTGGCTGAGCCCTCTGGTGCCAACTATTTCGACATCATGAATAACCTCTTGTATGTTG
TCCTGCAAGGAGAGGAGCCTGTTGAAATACATTCAAGTGTTTCCATTCATTTCGCTTTGA
CTGTGACATTTTCAGTCCTAGAAAAGGGCTGGGAGAGAGCAATGCTTGAAAGCCTAACTG
ACTTCTTCCAGATTGACCCAAACCAAATCAGACTCACTCTTGAGATGCCTGGCAACAAAG
AGACCTTAGAAGCCATTGCAAACAGTGAAGGAAAACGAAAGCGCAATTGCCCATCTGTAA
CTTGTGGAGACCCTTCTATCAGATATGGTCAACGTAGACCTCTCATGGCAGAAATGACAT
CACTTAAGATCACACCAGCAACAACTCTGGAAACTTTCTCAAAGGTGATTGTCATTGAAG
TTGGTGATCCGCCAAACATAAGGAACAGTGAACCCATTCAGGCCTTACCAAGTAACAGAT
TACAGAGATTGGTGAACCAGGTTATCACTGCTCAACAGACTGGAGCTCTAGAAAATGTCC
TAGGTATGACTGTTGGAGCCCTTCTAGTGACTCAGTCCAAGGGAGTCACAGGATATAG
INTRON 61 - 62 20,104,678 20,116,929 12,252
GTAAGCACTAATTATTAAAACATCT..........TTTGACCTCATTTATTTTTTTCTAG
62 EXON 62 20,104,542 20,104,677 2 0 136
AAATGCAAGTAGTTTAATAACTGGGAACCTGATATACACCCGGCCCTCAGAGCTTTCCAT
CCTGGTGCAGCCTTCTGATGGAGAAGTGGGAATAGAATTGCCAGTTCAGCCACGGCTTGT
CTTCCTGGATGAGAAG
INTRON 62 - 63 20,103,303 20,104,541 1,239
GTAGCTCCTCAGATCTGACAAGTTC..........TCTCTCTTTCCTCACTTATTTCCAG
63 EXON 63 20,103,215 20,103,302 0 1 88
AATGAGAGAGTAGAGTCTTTGGGTCTCCCCTCAGAACCCTGGATTATTTCAGTTTCTCTA
GAGGGAGCATCTGAATCAGTGCTTAAAG
INTRON 63 - 64 20,081,294 20,103,214 21,921
GTAGGTGCCAGTGACTTTTAAGTAT..........CCTTTGGTTTTCTGTTTGTTTATAG
64 EXON 64 20,081,186 20,081,293 1 1 108
GGTGTACCCTGGCAGAAACACGGGATGGCTATGTGACCTTTTCTAGATTGGCTGTCTTGA
TCTCTGGGTCAAATTGGCACTTGTTTTTTACTGTTATATCCCCTCCAG
INTRON 64 - 65 20,073,616 20,081,185 7,570
GTAATTTCAGCACAGTATACTTTTA..........AAACTTGTTTCTTCTTCCTAAACAG
65 EXON 65 20,073,457 20,073,615 1 1 159
GTACTAATTTTACAGCTCGATCAAGGACCTTCGTTGTCTTGCCCGTGGCCAGCAAGGAGA
GATCAACTATCATCTTGGCCTTGTCCCTGTGCTCAGTGGCATCATGGGTGGCTCTGAGCT
GTCTCATTTGCTGCTGGTTTAAGAAAAGCAAAACCAGAA
INTRON 65 - 66 20,070,501 20,073,456 2,956
GTAGGTGGCTTAAGGGAGGATGTTA..........GGCACTTGTTTTTTCATCACTACAG
66 EXON 66 20,070,378 20,070,500 1 1 123
AAATAAAACCAGAAGACATATCTGAATCCCAGGCTAAGGAACAAAAGAAGAATACCCATA
ATTCCTCCAAACCCAGAGGACTACAAGCAAAGACAGCAAAAGAGAACACTTTGATGGGAG
AAG
INTRON 66 - 67 20,058,711 20,070,377 11,667
GTAAGGGGTAAGCAATGAAGACCTC..........TTCTTCCCTTATGTTCTTTTTATAG
67 EXON 67 20,057,779 20,058,710 1 - 932
ATATGAGAATGAAGGTCATGCAGGGAATGCAGAGCCAGTTTCCCCAACACTCAATGGATG
GAGTGTCCAAAAGGAAAGTTAGCCGCCTTGCTGTCACAGAGGAAAGAACAGCTACACCTG
CCCCAAAGATTCCCAGAATCACCTGTGTTCCAGGATCTCTTGCTCAGCAGCTGGCACTGC
AGGAGCCTGGGAACTGGCAGGAGGCCCAACAGCAGTTGCTCAGATACCAGCTGGCAGGCC
GCAATCAGCTGCTCCTGTTACGCCCAGACCTCAGGCAAGAGAGGAAACAGGGTCAGGAGC
CTAGCCAGCTGGACAAAGGGAGTGACTGCACTGGACTGTCTCAAAAGAAGGCCACTTGCA
TTCCCACTGAGACTTTCGGCCTCCACACTGCTCCACCAGAAACCATCCAGTAACAGCTGT
GGGCATGGAGCACTGTATGAAAAGGAGAAAATGTTCAAAATTATTTCTGCATTGTAAATG
GGAAAGGAGAGGTCTGATCTGTTTGGACAAATAAGGAGAATGTGAACTCTAAATCTTTAA
ATTTTAATATGGAAGACAGTCAGGCAAATGCTTGTATACTGAGATTGTAATCAATCATGT
CTCTTGTACCTCTCATTGATCCTAACCAATTCCAGCAAATAATAGGACCTCAAAAACTTG
CTGATATTTTCTGGGGTTCAAACTGGTTACGTTGCAGCCAACTTAATACCTGTGCTATAA
ATACTGAATTTCAGTAAGCAGGAACTGTGATTAAGATTCCCTATAGTCAACACTCAGGAT
GCTTTAGGCTTGTCTTATGGAAGACCTGTTATAGCTTTAGTTAGCTGATGTTGTATCTGC
AGTGCTATAGAAATACCCAGGAGATATTTTACACCAACGTTTACCCTCCCTCCAAACAGA
GTTAACTTAATAAAAGTTACTTGTAGATTTTA
3' upstream sequence
TTTCGTGGTTTAAATTCAGTCATTAACAGGCACTTACTGCATTGGAAACATTATCATTTA
TCTTCATGAGTACGTGTATAAGAAAGATGATGGTCACATGGGATTTGTTAGGATTTCAGT
AAGGAAAAGATGTGTAATACTAAGTTTAGGCAAAAAAAAATAGGTACTATAGTTACATTT
TACATTATGAGTATTTGTATGAAATGGGGAAATATTCAAAATTATATCTAAATGGTAAAT
GGACAAGGAGAGGTCTAGCTGTTTGGACAATGAAGGGATAATATGAACTCTCAATATTTT
GACTTATTAGTTCTAATATTTTCTTTTAGTTGGGTCAAATTTACAATGACAAGGAAATTT
TCCTGGAAGACTAAACATAACCTAATGATAAAGTGCATTAATAGTTATAATAGAACTGAT
TGAGGGAGGGCTCTGACACCCGGACTCAGATGAGATCACCATCTTATATCCTGGGTCTCT
CAGAGACCAGTTCACACAGGAGAGCATGCAGGTTGCAGAAGCAACAGAGCTTCTTGGACA
GGGTCACTTCAGCCTTCATCCTCAGCTAGGAGGTAGAGCTGAGACCCAGTCTTCTGCACA
CCTTCCCTGCCAGAAGAAAGTCAGCCTCCAGGGAGGGCTCTGACCCCAGGACTCAGATGA
GAGCACCATCCTGAATCTCAGGTCTCTCAGAGACCAGTCTGCAGAGGAGAGCTCGCAGAG
AGCTTGCCTGCAGAGAGTGCGCTGACCACTGGGATTCAGGGGAGAGTTGGACTCCTAGGA
GTGCTGACAGAGACTAACAGAATCACAGGAGCAACAAGCTCCAGCCAGAGTCAGCTAGAA
TATCTAACACCAGAGATTACCAGATGGCGAAAGCCATACATAAGAATCTTACTAACACAA
ACCAAGACCACTCAGCACCATCAGAACCCAATCCTCCTACCACAGTGAGTCCTGGAAAAG
CAAGATTCAGATTTAAAATCGTATCTCATGATGCTAATAG..........

Sequence Detail Report

Gene Symbol (Gene ID) Pkhd1 (ENSMUSG00000043760)
Transcript ID ENSMUST00000088448
SNP Information
Strain :
Sequence Retrieve :
Exon translate :
CDS Start ( 1 ) - End ( 4060 )
-
Strand : forward reverse
Show sequence : nucleotide amino acid
Color information