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Target CDS Information

Gene Symbol (Gene ID) Adam15 (ENSMUSG00000028041)
Cross Reference
EMBL AB022089, AF006196, AK048901, ...show all
Fantom C230079P07, F630016O18, G530017P16, ...show all
GO GO:0001525, GO:0001669, GO:0001953, ...show all
goslim_goa GO:0000902, GO:0002376, GO:0003674, ...show all
MEROPS M12.215
MGI_trans_name Adam15-003
OTTP OTTMUSP00000024875
OTTT OTTMUST00000052450
protein_id AAC61896.1, AAH09132.1, ABP73662.1, ...show all
Reactome R-MMU-1474228, R-MMU-1474244
UCSC uc008pyw.1
UniParc UPI00000E63D2
Uniprot/SWISSPROT O88839
Vega_transcript Adam15-003, OTTMUST00000052450
Vega_translation 187700, OTTMUSP00000024875
Definition protein_id:ENSMUSP00000103070
translation:
MRLALLWALGLLGAGSPRPSPPLPNIGGTEEEQQASPERTLSGSMESRVVQDSPPMSLAD
VLQTGLPEALRISLELDSESHVLELLQNRDLIPGRPTLVWYQPDGTRMVSEGYSLENCCY
RGRVQGHPSSWVSLCACSGIRGLIVLSPERGYTLELGPGDLQRPVISRIQDHLLLGHTCA
PSWHASVPTRAGPDLLLEQHHAHRLKRDVVTETKIVELVIVADNSEVRKYPDFQQLLNRT
LEAALLLDTFFQPLNVRVALVGLEAWTQHNLIEMSSNPAVLLDNFLRWRRTDLLPRLPHD
SAQLVTVTSFSGPMVGMAIQNSICSPDFSGGVNMDHSTSILGVASSIAHELGHSLGLDHD
SPGHSCPCPGPAPAKSCIMEASTDFLPGLNFSNCSRQALEKALLEGMGSCLFERHPPGDL
PGPGDGSLPLVVPSRPAPPPPAASSLYL

Chromosome 3
Length
Position(start - end)
9,975
89,339,911 - 89,349,887
Orient to Chromosome minus
Link Location : (3:89339911-89349887)
/

Detail Map


 

Report

Polymorphisms Report

Target Strain  MSMv4  JF1v3  KJRv1  SWNv1  CHDv1  NJLv1  BLG2v1  HMIv1  BFMv1  PGN2v1
Gene Symbol (Gene ID) Adam15 (ENSMUSG00000028041)
Transcript ID ENSMUST00000107446
Reports
substitution
cSNPs6
Insertion7
Deletion17
SNPs
+1kb
5'UTR
CDS
3'UTR
INTRON
-1kb
Insertions
+1kb
5'UTR
CDS
3'UTR
INTRON
-1kb
Deletions
+1kb
5'UTR
CDS
3'UTR
INTRON
-1kb
coding sequence substitutions
premature termination by the nucleotide substitution0
synonymous num4
non-synonymous num2
synonymous substitutions 89345585 (p.Ser275Ser), 89347407 (p.Leu115Leu), 89347874 (p.Gln87Gln), 89348542 (p.Pro55Pro),
non-synonymous substitutions 89346885 (p.Ala202Thr), 89347468 (p.Arg95His),
B6 transcript
(ENSMUST00000107446)
MRLALLWALGLLGAGSPRPSPPLPNIGGTEEEQQASPERTLSGSMESRVVQDSPPMSLAD
VLQTGLPEALRISLELDSESHVLELLQNRDLIPGRPTLVWYQPDGTRMVSEGYSLENCCY
RGRVQGHPSSWVSLCACSGIRGLIVLSPERGYTLELGPGDLQRPVISRIQDHLLLGHTCA
PSWHASVPTRAGPDLLLEQHHAHRLKRDVVTETKIVELVIVADNSEVRKYPDFQQLLNRT
LEAALLLDTFFQPLNVRVALVGLEAWTQHNLIEMSSNPAVLLDNFLRWRRTDLLPRLPHD
SAQLVTVTSFSGPMVGMAIQNSICSPDFSGGVNMDHSTSILGVASSIAHELGHSLGLDHD
SPGHSCPCPGPAPAKSCIMEASTDFLPGLNFSNCSRQALEKALLEGMGSCLFERHPPGDL
PGPGDGSLPLVVPSRPAPPPPAASSLYL*
MSMv4 transcript
MRLALLWALGLLGAGSPRPSPPLPNIGGTEEEQQASPERTLSGSMESRVVQDSPPMSLAD
VLQTGLPEALRISLELDSESHVLELLQNRDLIPGHPTLVWYQPDGTRMVSEGYSLENCCY
RGRVQGHPSSWVSLCACSGIRGLIVLSPERGYTLELGPGDLQRPVISRIQDHLLLGHTCA
PSWHASVPTRAGPDLLLEQHHTHRLKRDVVTETKIVELVIVADNSEVRKYPDFQQLLNRT
LEAALLLDTFFQPLNVRVALVGLEAWTQHNLIEMSSNPAVLLDNFLRWRRTDLLPRLPHD
SAQLVTVTSFSGPMVGMAIQNSICSPDFSGGVNMDHSTSILGVASSIAHELGHSLGLDHD
SPGHSCPCPGPAPAKSCIMEASTDFLPGLNFSNCSRQALEKALLEGMGSCLFERHPPGDL
PGPGDGSLPLVVPSRPAPPPPAASSLYL*
homology99.55 (449 / 449)

Exon Detail Report

Target Strain  MSMv4  JF1v3  KJRv1  SWNv1  CHDv1  NJLv1  BLG2v1  HMIv1  BFMv1  PGN2v1
Gene Symbol (Gene ID) Adam15 (ENSMUSG00000028041)
Transcript ID ENSMUST00000107446
No. Exon / Intron Start End Start Phase End Phase Length Sequence
5' upstream sequence
..........GAAGATCATCCAGTTCCCTGGAACTCAAGTGACAGGCAATTGTTAGCTAT
GTGAGTGCTGGGATTCAAACCTGGGTCCTCTGGAAGAGCAGTCAGGGTTCTTAACCACGG
AACCATCTCTCCAGCCCAGTAAGGTGTAAATTGTGCCCTCCTCCCTTCTAAGCCTAAGTA
CCAAATTAAGCCGCTCCACAGGTGTACAGAATTGTTGTGGGTCATCCTTGGGAGTAAGTT
TGGGCACGCCAGGCTCCGCAGCCCATCATGGAGAAGAAGACTCTTTCGATTTATCTCAAT
ATCGCCCTCGAGGGCTCTTCTTGTCTACCCCAGCTTCCTCCAATATAGCATTGTCAGGCC
TTGGGACTTCATACATTAAGAGCTGCTCAGTGCCCCTGACAACCCTTTCTGCTCAGCCCA
CTTGGCATTAACCAATCCACCTCATCTTCCAACAGCCCCACTACCTGGTGGAGGCTCTGT
ATCGCCGGTGCCCTCTCCTGCACCGCTTCATGCGTCAGCGCTGTGTGGTGTGCCAGGCAA
TGGAGACGCCGGATTCCTACGTGTGCCCCACACCAGACTGCAAGGCCCTGTACTGCCGGT
CGTGCTGGGACGACATGCAACGGCTCTGCCCGGTGTGCACGCCCCGCGAAGAGCTCTCGT
CATCCGCCCACAGCGACAGCAACGACGACGCTGTGTATGGCGATTGAAGGGATGCTGCCC
GCCTTCTTGCTTAATAAAGTGTGATGCACGCTCCTGCGGCTGGTGCTTCGCAGGCATCCG
GGATTGGGTGAGCCGGAAGAACTGGCCCGCACAATCTCCACGAAGCCGGGCTACAGACGG
GAGGCAGGATGGAGGGAAGGCGCGAGCCTTGTGGTGTCCAAACCCATCCCGGTAGCTGCC
GGAAAGAGGCTGCGCTGAGCGGCAGGGGCGGAGCCTCAGACGGGGTGGGGCGGAGCCTCA
GACGGGGCGGGGCGGGGCCTAGTTGCTGCGCTGCACCGAGCTGGTGTCCG
1 EXON 1 89,349,809 89,349,959 - 1 151
GCGGGGCCGTGGCTGCTCCTCCACGCGTAGCCCCGCACCTGCTGCCCCCGTCCAGCCCGG
AGCTCCGCGGCCATGCGGCTGGCGCTGCTCTGGGCTCTGGGACTCCTGGGCGCGGGCAGC
CCTCGGCCCTCCCCGCCGCTGCCAAATATAG
INTRON 1 - 2 89,348,628 89,349,808 1,181
GTGAGTTCCCAGGACAGTGGGTCGA..........CTTAGGATGTTCTGGGACCCTGCAG
2 EXON 2 89,348,518 89,348,627 1 0 110
GAGGCACTGAGGAAGAGCAGCAAGCCAGCCCAGAGAGGACGCTGAGTGGATCCATGGAGA
GCCGGGTTGTTCAGGACAGCCCCCCGATGAGCCTAGCAGACGTGCTTCAG
INTRON 2 - 3 89,347,946 89,348,517 572
GTGAGGGACAGCCTGCTAATAAGAT..........GGTGACATGCCTCTGGTGTCCACAG
3 EXON 3 89,347,869 89,347,945 0 2 77
ACTGGTTTACCTGAGGCCCTGAGGATTTCCTTGGAGCTGGACAGTGAGAGTCATGTCCTG
GAGCTTCTACAGAATAG
INTRON 3 - 4 89,347,486 89,347,868 383
GTAAGGTGGCAGGCGCGAATAATTA..........AAATCCTGCCCTCTTTTTCTCACAG
4 EXON 4 89,347,407 89,347,485 2 0 79
AGATCTAATCCCTGGCCACCCAACTCTGGTGTGGTACCAGCCTGATGGCACCCGAATGGT
CAGCGAGGGCTACAGTCTT
INTRON 4 - 5 89,347,229 89,347,406 178
GTGAGTCAGGCCCTCTGGTGCTGTT..........AACTAATGTGGCTTCCCTGCTGTAG
5 EXON 5 89,347,152 89,347,228 0 2 77
GAAAACTGCTGCTACCGAGGACGAGTGCAGGGCCACCCCAGCTCCTGGGTGTCCCTCTGT
GCCTGCTCTGGGATCAG
INTRON 5 - 6 89,347,067 89,347,151 85
GTACTGTGGGTGGGTTAGCTACCAG..........TCTGACTCCCTGTCTTTTTCCTTAG
6 EXON 6 89,346,877 89,347,066 2 0 190
GGGGCTCATTGTCCTGTCCCCAGAGAGAGGCTATACACTGGAGCTGGGCCCTGGGGACCT
TCAGCGTCCTGTCATTTCTCGGATCCAAGACCACCTGTTGCTGGGCCACACCTGTGCCCC
AAGCTGGCATGCCTCTGTGCCCACTCGGGCAGGACCAGACCTCCTTCTGGAACAGCATCA
CACTCACAGG
INTRON 6 - 7 89,346,009 89,346,876 868
GTGAGGAGGCAGCCTGAGAGCCCAG..........GACACATCTCACTTCTTATCCACAG
7 EXON 7 89,345,943 89,346,008 0 0 66
CTTAAGCGAGATGTAGTAACAGAGACGAAAATTGTGGAGTTGGTGATTGTGGCTGATAAT
TCAGAG
INTRON 7 - 8 89,345,838 89,345,942 105
GTGAGTGTGTTGACACCATAGCCCT..........CCCATTCCCCCCCCCCCATCCCCAG
8 EXON 8 89,345,769 89,345,837 0 0 69
GTCAGAAAGTACCCTGACTTCCAACAACTGCTGAACCGGACACTAGAAGCGGCTCTCTTG
CTAGACACG
INTRON 8 - 9 89,345,663 89,345,768 106
GTGAGTCTGGGGCTGGGTAGGAGGC..........CTTTTCTGAGCCTGGGCCCTTTTAG
9 EXON 9 89,345,493 89,345,662 0 2 170
TTCTTCCAGCCCTTGAATGTCCGGGTAGCCCTTGTGGGCCTAGAGGCATGGACCCAGCAC
AACCTGATAGAAATGAGTTCCAACCCAGCTGTCCTGCTAGACAACTTCCTCCGCTGGCGC
CGGACAGACTTGCTGCCTCGACTGCCCCATGACAGTGCCCAACTGGTGAC
INTRON 9 - 10 89,345,364 89,345,492 129
GTAAGGATCCCAAACTCTGCTACCG..........CTGATCTCTCACCTCTGCCCTGCAG
10 EXON 10 89,345,279 89,345,363 2 0 85
TGTAACTTCCTTCTCTGGTCCCATGGTGGGCATGGCCATTCAGAATTCCATCTGTTCCCC
TGACTTCTCCGGAGGTGTGAATATG
INTRON 10 - 11 89,344,855 89,345,278 424
GTAAGCTGTCTGCGGGTCTCCTCAT..........GGGGTATCTCCCTCCCCAATGATAG
11 EXON 11 89,344,706 89,344,854 0 2 149
GACCACTCCACAAGCATCTTAGGCGTTGCCTCCTCGATTGCCCATGAATTGGGCCACAGT
CTGGGTTTGGACCATGATTCTCCCGGGCACAGCTGTCCCTGTCCAGGTCCAGCCCCGGCT
AAGAGCTGCATCATGGAGGCCTCCACAGA
INTRON 11 - 12 89,344,600 89,344,705 106
GTGAGTAACTGGGGGTGGGGTGAGG..........TAGCTCGCCTGGCTGCTTTCCTCAG
12 EXON 12 89,344,510 89,344,599 2 2 90
CTTCCTACCAGGTTTGAACTTCAGCAACTGCAGCCGACAGGCCCTGGAAAAGGCCCTCCT
GGAAGGAATGGGCAGCTGCCTCTTCGAACG
INTRON 12 - 13 89,340,118 89,344,509 4,392
GCAACCCAGCCTGGCCCCTATGTCC..........CACTGCCTGCCAACCCACAGGGCCG
13 EXON 13 89,340,055 89,340,117 2 2 63
GCACCCACCAGGTGACCTGCCTGGCCCAGGAGATGGAAGCTTGCCGCTGGTGGTGCCCTC
CAG
INTRON 13 - 14 89,339,954 89,340,054 101
GTAGGTGAAGAGGGTGTTGCTGAGG..........CCTTCTTGGCTTTTCTAAACTCCAG
14 EXON 14 89,339,644 89,339,953 2 - 310
GCCAGCTCCACCACCCCCTGCAGCATCTTCGCTCTACCTCTGACCTCTGGAGATTTGGCT
GCCTCCTTCTCAAGCTCTAAGACTCAAAGAAATGGAACCTCTGCCCCAAACACTAGAGAA
GCAGGAGAACAGACAATCTGGTGTCCAGCCCTAAAGAACCACCAGGTGCTGTTAAGCAAT
ACCTGGGGACGCACTAAAATAGCTGCAGCGGGATGCTGGGGAGGGGCCGAAGCCGGGGCT
GGAGTAGGTGGCGGAAGGACATGGACACTGTCTATCTCTGCTCTGTTGTAATAAATGTGA
GATCTTGGAA
3' upstream sequence
TGTGTCTGCTCCTGGAAGCTGGGTAGTTCCTGCTGTTTGCAGGTCTGGCCACTAGGAGAC
GCTGCTGGGTCAAACCAGGGCCTGTAGAAGAGGATCACTTCCCAGAAAGGGTCAACAAGA
ATGTGTCACTTAGGATGCCTCTGGCTTGCTTCTGCCCAGTCTGGGTCCGATGGCCTCTGG
ACTCCCAAGTTCTCCCCAGCAATGCTGCTCAGCCCCCACCACAGCTAGAGACAAATGACC
TAAGTCGTCAGACCTGCATCCCCACCCTCTGACCAGTGGCTGGGAAAATGGATCTAACTG
GTGTTCTCAGAGCCCTGAGCCTGGGTGGAGCAGGGCAGCGGCTGCTTGGATTCCAAGGCT
TCACACCTGCCTCCTCCACTTCCCTGCCCCCACCTGAAGGTTCCAGAACAAAGGTGCTTT
GTGCTTTGTACTGATTGCTACCACCTCATCATTTAGACCTCAGGACTGAGGACTCCTGGG
AGAGAGGTGTGTGCGGATAAGGGGCAGGCTGTGTCCCACAATGGTCACCCAGCACGATGC
TCTAGAGGAATGTCAGGGGTGTCCCCAGAGCCACTTCAGTCCTTCCCCTTGTACCATCTG
CGTGTGCAAAGCAAAAGAACAATGCATGGAAGGTAATTCTGCTTCAGCCTCCAAAAGTAT
CTGGGGTATCAGGTGCTGGCCATCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
GTGTGCGCGCGCGCGCGCGCACGGCACCTATGTACACACTTTCCTGCCCCCAAATAGGAA
CTTGCTGTGTGCTGACTAGAATGCTGGATTCTTCTGTGGGTGTACTTCATGTGCCATCCA
GCTCTGACCTCCCAGACTTCAATGAGGCTTTCTACCTTGAACCAATGAAGACACAAAGGA
CAAGATCTAAACATAAACCGAACCGGCCCTCTTAGGTGGTGCTGCATGAACCCCGTGGCT
GTAATCCCAGCACTGGAGAGGATAGAGCAGGAGGATCATT..........

Sequence Detail Report

Gene Symbol (Gene ID) Adam15 (ENSMUSG00000028041)
Transcript ID ENSMUST00000107446
SNP Information
Strain :
Sequence Retrieve :
Exon translate :
CDS Start ( 1 ) - End ( 449 )
-
Strand : forward reverse
Show sequence : nucleotide amino acid
Color information