MoG+ -Mouse Genome database with high added value-

Target CDS Information

Gene Symbol (Gene ID)

Sema4d (ENSMUSG00000021451)

Cross Reference

CCDS	CCDS26514.1
EMBL	BC049780, CH466546, U69535
GO	GO:0000122, GO:0001934, GO:0004872, ...show all
goslim_goa	GO:0003674, GO:0004871, GO:0005575, ...show all
MGI_trans_name	Sema4d-001
OTTP	OTTMUSP00000022963
OTTT	OTTMUST00000049521
protein_id	AAC52964.1, AAH49780.2, EDL41105.1, ...show all
Reactome	R-MMU-1266738, R-MMU-373755, R-MMU-400685, ...show all
RefSeq_mRNA	NM_001281880.1

RefSeq_mRNA_predicted	XM_006516886.2
RefSeq_peptide	NP_001268809
RefSeq_peptide_predicted	XP_006516948.1, XP_006516949.1, XP_006516950.1, ...show all
UCSC	uc007qmp.2
UniParc	UPI0000021BF6
Uniprot/SWISSPROT	O09126
Vega_transcript	OTTMUST00000049521, Sema4d-001
Vega_translation	214460, OTTMUSP00000022963

Definition

protein_id:ENSMUSP00000105667
translation:

MRMCAPVRGLFLALVVVLRTAVAFAPVPRLTWEHGEVGLVQFHKPGIFNYSALLMSEDKD
TLYVGAREAVFAVNALNISEKQHEVYWKVSEDKKSKCAEKGKSKQTECLNYIRVLQPLSS
TSLYVCGTNAFQPTCDHLNLTSFKFLGKSEDGKGRCPFDPAHSYTSVMVGGELYSGTSYN
FLGSEPIISRNSSHSPLRTEYAIPWLNEPSFVFADVIQKSPDGPEGEDDKVYFFFTEVSV
EYEFVFKLMIPRVARVCKGDQGGLRTLQKKWTSFLKARLICSKPDSGLVFNILQDVFVLR
APGLKEPVFYAVFTPQLNNVGLSAVCAYTLATVEAVFSRGKYMQSATVEQSHTKWVRYNG
PVPTPRPGACIDSEARAANYTSSLNLPDKTLQFVKDHPLMDDSVTPIDNRPKLIKKDVNY
TQIVVDRTQALDGTFYDVMFISTDRGALHKAVILTKEVHVIEETQLFRDSEPVLTLLLSS
KKGRKFVYAGSNSGVVQAPLAFCEKHGSCEDCVLARDPYCAWSPAIKACVTLHQEEASSR
GWIQDMSGDTSSCLDKSKESFNQHFFKHGGTAELKCFQKSNLARVVWKFQNGELKAASPK
YGFVGRKHLLIFNLSDGDSGVYQCLSEERVRNKTVSQLLAKHVLEVKMVPRTPPSPTSED
AQTEGSKITSKMPVASTQGSSPPTPALWATSPRAATLPPKSSSGTSCEPKMVINTVPQLH
SEKTVYLKSSDNRLLMSLLLFIFVLFLCLFSYNCYKGYLPGQCLKFRSALLLGKKTPKSD
FSDLEQSVKETLVEPGSFSQQNGDHPKPALDTGYETEQDTITSKVPTDREDSQRIDELSA
RDKPFDVKCELKFADSDADGD

Chromosome

Length
Position(start - end)

22,719
51,702,609 - 51,725,329

Orient to Chromosome

minus

Link

Location : (13:51702609-51725329)
/

Detail Map

name	Gm15440 (ENSMUSG00000051107)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : Gm15440 note : predicted gene 15440 [Source:MGI Symbol;Acc:MGI:3642353]

name	Sema4d (ENSMUSG00000021451)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : Sema4d note : sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D [Source:MGI Symbol;Acc:MGI:109244]

name	Gm23566 (ENSMUSG00000092648)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : Gm23566 note : predicted gene, 23566 [Source:MGI Symbol;Acc:MGI:5453343]

name	Gm15440 (ENSMUSG00000051107)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000110042

name	Sema4d (ENSMUSG00000021451)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000110040

name	Sema4d (ENSMUSG00000021451)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000021900

name	Sema4d (ENSMUSG00000021451)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000110039

name	Sema4d (ENSMUSG00000021451) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS26514.1 Uniprot/SWISSPROT:O09126 RefSeq_peptide:NP_001268809 RefSeq_mRNA:NM_001281880.1 RefSeq_mRNA_predicted:XM_006516886.2 RefSeq_peptide_predicted:XP_006516948.1 RefSeq_peptide_predicted:XP_006516949.1 RefSeq_peptide_predicted:XP_006516950.1 RefSeq_peptide_predicted:XP_006516951.1 Vega_transcript:OTTMUST00000049521 Vega_transcript:Sema4d-001 UCSC:uc007qmp.2 EMBL:BC049780 EMBL:CH466546 EMBL:U69535 GO:GO:0000122 GO:GO:0001934 GO:GO:0004872 GO:GO:0004888 GO:GO:0005102 GO:GO:0005615 GO:GO:0005887 GO:GO:0007162 GO:GO:0008360 GO:GO:0010693 GO:GO:0014068 GO:GO:0016020 GO:GO:0030215 GO:GO:0030335 GO:GO:0031344 GO:GO:0043547 GO:GO:0043931 GO:GO:0045668 GO:GO:0048672 GO:GO:0048814 GO:GO:0050731 GO:GO:0050732 GO:GO:0050772 GO:GO:0070486 GO:GO:0071526 GO:GO:1900220 MGI_trans_name:Sema4d-001 Vega_translation:214460 Vega_translation:OTTMUSP00000022963 goslim_goa:GO:0003674 goslim_goa:GO:0004871 goslim_goa:GO:0005575 goslim_goa:GO:0005576 goslim_goa:GO:0005615 goslim_goa:GO:0005623 goslim_goa:GO:0005886 goslim_goa:GO:0007155 goslim_goa:GO:0007165 goslim_goa:GO:0008150 goslim_goa:GO:0021700 goslim_goa:GO:0030154 goslim_goa:GO:0048856 protein_id:AAC52964.1 protein_id:AAH49780.2 protein_id:EDL41105.1 protein_id:EDL41106.1 protein_id:EDL41107.1 OTTP:OTTMUSP00000022963 OTTT:OTTMUST00000049521 Reactome:R-MMU-1266738 Reactome:R-MMU-373755 Reactome:R-MMU-400685 Reactome:R-MMU-416550 Reactome:R-MMU-416572 Reactome:R-MMU-416700 Reactome:R-MMU-422475 UniParc:UPI0000021BF6
definition	note : transcript_id=ENSMUST00000110040 protein_id : ENSMUSP00000105667 translation : MRMCAPVRGLFLALVVVLRTAVAFAPVPRLTWEHGEVGLVQFHKPGIFNYSALLMSEDKDTLYVGAREAVFAVNALNISEKQHEVYWKVSEDKKSKCAEKGKSKQTECLNYIRVLQPLSSTSLYVCGTNAFQPTCDHLNLTSFKFLGKSEDGKGRCPFDPAHSYTSVMVGGELYSGTSYNFLGSEPIISRNSSHSPLRTEYAIPWLNEPSFVFADVIQKSPDGPEGEDDKVYFFFTEVSVEYEFVFKLMIPRVARVCKGDQGGLRTLQKKWTSFLKARLICSKPDSGLVFNILQDVFVLRAPGLKEPVFYAVFTPQLNNVGLSAVCAYTLATVEAVFSRGKYMQSATVEQSHTKWVRYNGPVPTPRPGACIDSEARAANYTSSLNLPDKTLQFVKDHPLMDDSVTPIDNRPKLIKKDVNYTQIVVDRTQALDGTFYDVMFISTDRGALHKAVILTKEVHVIEETQLFRDSEPVLTLLLSSKKGRKFVYAGSNSGVVQAPLAFCEKHGSCEDCVLARDPYCAWSPAIKACVTLHQEEASSRGWIQDMSGDTSSCLDKSKESFNQHFFKHGGTAELKCFQKSNLARVVWKFQNGELKAASPKYGFVGRKHLLIFNLSDGDSGVYQCLSEERVRNKTVSQLLAKHVLEVKMVPRTPPSPTSEDAQTEGSKITSKMPVASTQGSSPPTPALWATSPRAATLPPKSSSGTSCEPKMVINTVPQLHSEKTVYLKSSDNRLLMSLLLFIFVLFLCLFSYNCYKGYLPGQCLKFRSALLLGKKTPKSDFSDLEQSVKETLVEPGSFSQQNGDHPKPALDTGYETEQDTITSKVPTDREDSQRIDELSARDKPFDVKCELKFADSDADGD

name	Sema4d (ENSMUSG00000021451) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS26514.1 Uniprot/SWISSPROT:O09126 RefSeq_peptide:NP_038688 RefSeq_mRNA:NM_013660.4 RefSeq_mRNA_predicted:XM_006516883.2 RefSeq_mRNA_predicted:XM_006516884.2 RefSeq_peptide_predicted:XP_006516946.1 RefSeq_peptide_predicted:XP_006516947.1 RefSeq_peptide_predicted:XP_006516948.1 RefSeq_peptide_predicted:XP_006516950.1 RefSeq_peptide_predicted:XP_006516951.1 Vega_transcript:OTTMUST00000049522 Vega_transcript:Sema4d-002 UCSC:uc007qmo.2 EMBL:BC049780 EMBL:CH466546 EMBL:U69535 GO:GO:0000122 GO:GO:0000122 GO:GO:0001934 GO:GO:0001934 GO:GO:0004872 GO:GO:0004872 GO:GO:0004888 GO:GO:0004888 GO:GO:0005102 GO:GO:0005102 GO:GO:0005615 GO:GO:0005887 GO:GO:0005887 GO:GO:0007162 GO:GO:0007162 GO:GO:0008360 GO:GO:0008360 GO:GO:0010693 GO:GO:0010693 GO:GO:0014068 GO:GO:0014068 GO:GO:0016020 GO:GO:0030215 GO:GO:0030335 GO:GO:0031344 GO:GO:0031344 GO:GO:0043547 GO:GO:0043931 GO:GO:0043931 GO:GO:0045668 GO:GO:0048672 GO:GO:0048672 GO:GO:0048814 GO:GO:0048814 GO:GO:0050731 GO:GO:0050732 GO:GO:0050772 GO:GO:0070486 GO:GO:0070486 GO:GO:0071526 GO:GO:0071526 GO:GO:1900220 MGI_trans_name:Sema4d-002 Vega_translation:214461 Vega_translation:OTTMUSP00000022964 goslim_goa:GO:0003674 goslim_goa:GO:0004871 goslim_goa:GO:0005575 goslim_goa:GO:0005576 goslim_goa:GO:0005615 goslim_goa:GO:0005623 goslim_goa:GO:0005886 goslim_goa:GO:0007155 goslim_goa:GO:0007165 goslim_goa:GO:0008150 goslim_goa:GO:0021700 goslim_goa:GO:0030154 goslim_goa:GO:0048856 protein_id:AAC52964.1 protein_id:AAH49780.2 protein_id:EDL41105.1 protein_id:EDL41106.1 protein_id:EDL41107.1 OTTP:OTTMUSP00000022964 OTTT:OTTMUST00000049522 Reactome:R-MMU-1266738 Reactome:R-MMU-373755 Reactome:R-MMU-400685 Reactome:R-MMU-416550 Reactome:R-MMU-416572 Reactome:R-MMU-416700 Reactome:R-MMU-422475 UniParc:UPI0000021BF6
definition	note : transcript_id=ENSMUST00000021900 protein_id : ENSMUSP00000021900 translation : MRMCAPVRGLFLALVVVLRTAVAFAPVPRLTWEHGEVGLVQFHKPGIFNYSALLMSEDKDTLYVGAREAVFAVNALNISEKQHEVYWKVSEDKKSKCAEKGKSKQTECLNYIRVLQPLSSTSLYVCGTNAFQPTCDHLNLTSFKFLGKSEDGKGRCPFDPAHSYTSVMVGGELYSGTSYNFLGSEPIISRNSSHSPLRTEYAIPWLNEPSFVFADVIQKSPDGPEGEDDKVYFFFTEVSVEYEFVFKLMIPRVARVCKGDQGGLRTLQKKWTSFLKARLICSKPDSGLVFNILQDVFVLRAPGLKEPVFYAVFTPQLNNVGLSAVCAYTLATVEAVFSRGKYMQSATVEQSHTKWVRYNGPVPTPRPGACIDSEARAANYTSSLNLPDKTLQFVKDHPLMDDSVTPIDNRPKLIKKDVNYTQIVVDRTQALDGTFYDVMFISTDRGALHKAVILTKEVHVIEETQLFRDSEPVLTLLLSSKKGRKFVYAGSNSGVVQAPLAFCEKHGSCEDCVLARDPYCAWSPAIKACVTLHQEEASSRGWIQDMSGDTSSCLDKSKESFNQHFFKHGGTAELKCFQKSNLARVVWKFQNGELKAASPKYGFVGRKHLLIFNLSDGDSGVYQCLSEERVRNKTVSQLLAKHVLEVKMVPRTPPSPTSEDAQTEGSKITSKMPVASTQGSSPPTPALWATSPRAATLPPKSSSGTSCEPKMVINTVPQLHSEKTVYLKSSDNRLLMSLLLFIFVLFLCLFSYNCYKGYLPGQCLKFRSALLLGKKTPKSDFSDLEQSVKETLVEPGSFSQQNGDHPKPALDTGYETEQDTITSKVPTDREDSQRIDELSARDKPFDVKCELKFADSDADGD

name	Sema4d (ENSMUSG00000021451) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS26514.1 Uniprot/SWISSPROT:O09126 RefSeq_peptide_predicted:XP_006516948.1 RefSeq_peptide_predicted:XP_006516950.1 RefSeq_peptide_predicted:XP_006516951.1 Vega_transcript:OTTMUST00000049523 Vega_transcript:Sema4d-003 UCSC:uc007qmn.2 EMBL:BC049780 EMBL:CH466546 EMBL:U69535 GO:GO:0000122 GO:GO:0001934 GO:GO:0004872 GO:GO:0004888 GO:GO:0005102 GO:GO:0005615 GO:GO:0005887 GO:GO:0007162 GO:GO:0008360 GO:GO:0010693 GO:GO:0014068 GO:GO:0016020 GO:GO:0030215 GO:GO:0030335 GO:GO:0031344 GO:GO:0043547 GO:GO:0043931 GO:GO:0045668 GO:GO:0048672 GO:GO:0048814 GO:GO:0050731 GO:GO:0050732 GO:GO:0050772 GO:GO:0070486 GO:GO:0071526 GO:GO:1900220 MGI_trans_name:Sema4d-003 Vega_translation:214462 Vega_translation:OTTMUSP00000022965 goslim_goa:GO:0003674 goslim_goa:GO:0004871 goslim_goa:GO:0005575 goslim_goa:GO:0005576 goslim_goa:GO:0005615 goslim_goa:GO:0005623 goslim_goa:GO:0005886 goslim_goa:GO:0007155 goslim_goa:GO:0007165 goslim_goa:GO:0008150 goslim_goa:GO:0021700 goslim_goa:GO:0030154 goslim_goa:GO:0048856 protein_id:AAC52964.1 protein_id:AAH49780.2 protein_id:EDL41105.1 protein_id:EDL41106.1 protein_id:EDL41107.1 OTTP:OTTMUSP00000022965 OTTT:OTTMUST00000049523 Reactome:R-MMU-1266738 Reactome:R-MMU-373755 Reactome:R-MMU-400685 Reactome:R-MMU-416550 Reactome:R-MMU-416572 Reactome:R-MMU-416700 Reactome:R-MMU-422475 UniParc:UPI0000021BF6
definition	note : transcript_id=ENSMUST00000110039 protein_id : ENSMUSP00000105666 translation : MRMCAPVRGLFLALVVVLRTAVAFAPVPRLTWEHGEVGLVQFHKPGIFNYSALLMSEDKDTLYVGAREAVFAVNALNISEKQHEVYWKVSEDKKSKCAEKGKSKQTECLNYIRVLQPLSSTSLYVCGTNAFQPTCDHLNLTSFKFLGKSEDGKGRCPFDPAHSYTSVMVGGELYSGTSYNFLGSEPIISRNSSHSPLRTEYAIPWLNEPSFVFADVIQKSPDGPEGEDDKVYFFFTEVSVEYEFVFKLMIPRVARVCKGDQGGLRTLQKKWTSFLKARLICSKPDSGLVFNILQDVFVLRAPGLKEPVFYAVFTPQLNNVGLSAVCAYTLATVEAVFSRGKYMQSATVEQSHTKWVRYNGPVPTPRPGACIDSEARAANYTSSLNLPDKTLQFVKDHPLMDDSVTPIDNRPKLIKKDVNYTQIVVDRTQALDGTFYDVMFISTDRGALHKAVILTKEVHVIEETQLFRDSEPVLTLLLSSKKGRKFVYAGSNSGVVQAPLAFCEKHGSCEDCVLARDPYCAWSPAIKACVTLHQEEASSRGWIQDMSGDTSSCLDKSKESFNQHFFKHGGTAELKCFQKSNLARVVWKFQNGELKAASPKYGFVGRKHLLIFNLSDGDSGVYQCLSEERVRNKTVSQLLAKHVLEVKMVPRTPPSPTSEDAQTEGSKITSKMPVASTQGSSPPTPALWATSPRAATLPPKSSSGTSCEPKMVINTVPQLHSEKTVYLKSSDNRLLMSLLLFIFVLFLCLFSYNCYKGYLPGQCLKFRSALLLGKKTPKSDFSDLEQSVKETLVEPGSFSQQNGDHPKPALDTGYETEQDTITSKVPTDREDSQRIDELSARDKPFDVKCELKFADSDADGD

name
type	STS
link
xref	UniSTS_NUM:116408 UniSTS:D13Mit139
definition	note : map_weight=1 standard_name : D13Mit139

name
type	misc_feature
link
xref
definition	note : contig AC126547.4 30663..181823(1)

name
type	misc_feature
link
xref
definition	note : contig AC126247.3 28890..143813(1)

name	Sema4d (ENSMUSG00000021451)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000049524 Vega_transcript:OTTMUST00000049524 MGI_trans_name:Sema4d-004 OTTT:OTTMUST00000049524
definition	note : retained_intron note : transcript_id=ENSMUST00000125511

name	Sema4d (ENSMUSG00000021451)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000049525 Vega_transcript:OTTMUST00000049525 MGI_trans_name:Sema4d-005 OTTT:OTTMUST00000049525
definition	note : processed_transcript note : transcript_id=ENSMUST00000139865

name	Sema4d (ENSMUSG00000021451)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000049526 Vega_transcript:OTTMUST00000049526 MGI_trans_name:Sema4d-006 OTTT:OTTMUST00000049526
definition	note : processed_transcript note : transcript_id=ENSMUST00000138228

name	Sema4d (ENSMUSG00000021451)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000049531 Vega_transcript:OTTMUST00000049531 MGI_trans_name:Sema4d-011 OTTT:OTTMUST00000049531
definition	note : processed_transcript note : transcript_id=ENSMUST00000150662

name	Sema4d (ENSMUSG00000021451)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000049530 Vega_transcript:OTTMUST00000049530 MGI_trans_name:Sema4d-010 OTTT:OTTMUST00000049530
definition	note : processed_transcript note : transcript_id=ENSMUST00000139018

name	Sema4d (ENSMUSG00000021451)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000049528 Vega_transcript:OTTMUST00000049528 MGI_trans_name:Sema4d-008 OTTT:OTTMUST00000049528
definition	note : processed_transcript note : transcript_id=ENSMUST00000146238

name	Sema4d (ENSMUSG00000021451)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000049529 Vega_transcript:OTTMUST00000049529 MGI_trans_name:Sema4d-009 OTTT:OTTMUST00000049529
definition	note : processed_transcript note : transcript_id=ENSMUST00000146922

name	Sema4d (ENSMUSG00000021451)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000049527 Vega_transcript:OTTMUST00000049527 MGI_trans_name:Sema4d-007 OTTT:OTTMUST00000049527
definition	note : processed_transcript note : transcript_id=ENSMUST00000143396

name	Sema4d (ENSMUSG00000021451)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000049532 Vega_transcript:OTTMUST00000049532 MGI_trans_name:Sema4d-012 OTTT:OTTMUST00000049532
definition	note : processed_transcript note : transcript_id=ENSMUST00000139858

name	Sema4d (ENSMUSG00000021451)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000049533 Vega_transcript:OTTMUST00000049533 MGI_trans_name:Sema4d-013 OTTT:OTTMUST00000049533
definition	note : processed_transcript note : transcript_id=ENSMUST00000155896

name	Gm23566 (ENSMUSG00000092648)
type	misc_RNA
link	VEGA Ensembl MGI
xref	MGI_trans_name:Gm23566-201
definition	note : miRNA note : transcript_id=ENSMUST00000174907

Polymorphisms Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Sema4d (ENSMUSG00000021451)
Transcript ID	ENSMUST00000110040

Reports
substitution
cSNPs	11
Insertion	56
Deletion	84
SNPs	+1kb 51794301(c.-68972C>T), 51794707(c.-69378A>G), 51794824(c.-69495C>G), 51795091(c.-69762C>T), 51795115(c.-69786T>C), 51795424(c.-70095A>C), 51795519(c.-70190G>A), 51795537(c.-70208G>C), 51795622(c.-70293T>C), 51795670(c.-70341G>A), 51795770(c.-70441C>A), 51795772(c.-70443C>T), 51795789(c.-70460G>A), 51795826(c.-70497A>G), 51795926(c.-70597C>T), 51795933(c.-70604A>G), 51795956(c.-70627T>C), 51795963(c.-70634T>G), 51796241(c.-70912G>A), 51796326(c.-70997T>C), 51796409(c.-71080G>A), 51796425(c.-71096A>T), 51796470(c.-71141A>G), 51796541(c.-71212G>A), 51796545(c.-71216A>G), 51796656(c.-71327C>T), 51796772(c.-71443C>T), 51796958(c.-71629C>T), 51797104(c.-71775T>C), 51797195(c.-71866G>A), 51797299(c.-71970A>T), 51797438(c.-72109A>G), 51797442(c.-72113G>A), 51797446(c.-72117G>A), 51797510(c.-72181G>A), 51797585(c.-72256C>T), 51797652(c.-72323A>G), 51797664(c.-72335C>T), 51797680(c.-72351A>G), 51797761(c.-72432T>A), 51797791(c.-72462C>T), 51797866(c.-72537T>C), 51798179(c.-72850C>A), 51798196(c.-72867T>C), 51798255(c.-72926T>G), 51798439(c.-73110G>A), 51798637(c.-73308A>G), 5'UTR 51725359(c.-30C>T), 51793521(c.-371T>G), CDS 51702741(c.2454G>A), 51703020(c.2175G>A), 51703341(c.1854C>T), 51704972(c.1644T>C), 51708968(c.1353A>C), 51710124(c.1118G>A), 51713765(c.549C>T), 51713801(c.513C>T), 51723594(c.201G>A), 51723603(c.192A>G), 51725273(c.57A>G), 3'UTR 51701412(c.1197C>T), 51701413(c.1196T>A), 51701618(c.991T>C), 51701713(c.896G>T), 51701772(c.837G>C), 51701773(c.836T>C), 51701886(c.723T>G), 51702080(c.529C>T), 51702201(c.408A>T), 51702204(c.405A>T), INTRON 51703864(c.1664-333G>A), 51703958(c.1664-427A>G), 51703993(c.1664-462G>A), 51704203(c.1664-672C>T), 51704656(c.1663+297G>T), 51704742(c.1663+211G>T), 51705007(c.1620-11C>T), 51705366(c.1447-121T>C), 51705571(c.1447-326C>T), 51705655(c.1447-410G>A), 51705707(c.1447-462C>G), 51705893(c.1447-648G>T), 51705903(c.1447-658A>C), 51705913(c.1447-668A>G), 51705915(c.1447-670G>T), 51706059(c.1447-814T>C), 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51765114(c.-346-1794G>T), 51765168(c.-346-1848C>T), 51765219(c.-346-1899G>A), 51765244(c.-346-1924G>C), 51765331(c.-346-2011C>T), 51765335(c.-346-2015C>T), 51765339(c.-346-2019C>T), 51765402(c.-346-2082A>G), 51765412(c.-346-2092G>A), 51765529(c.-346-2209A>G), 51765573(c.-346-2253T>C), 51765605(c.-346-2285C>T), 51765727(c.-346-2407G>C), 51765839(c.-346-2519C>T), 51765915(c.-346-2595A>G), 51765945(c.-346-2625C>T), 51765994(c.-346-2674A>G), 51766014(c.-346-2694T>C), 51766094(c.-346-2774C>T), 51766107(c.-346-2787C>T), 51766148(c.-346-2828A>G), 51766177(c.-346-2857T>G), 51766178(c.-346-2858C>T), 51766182(c.-346-2862T>C), 51766343(c.-346-3023T>C), 51766344(c.-346-3024G>C), 51766365(c.-346-3045A>G), 51766370(c.-346-3050T>C), 51766455(c.-346-3135A>G), 51766498(c.-346-3178A>G), 51766567(c.-346-3247T>C), 51766611(c.-346-3291T>G), 51766618(c.-346-3298T>A), 51766666(c.-346-3346T>C), 51766710(c.-346-3390A>G), 51766770(c.-346-3450G>A), 51766887(c.-346-3567T>C), 51766996(c.-346-3676T>A), 51766997(c.-346-3677C>T), 51767004(c.-346-3684T>C), 51767061(c.-346-3741G>T), 51767105(c.-346-3785A>G), 51767115(c.-346-3795A>G), 51767188(c.-346-3868C>T), 51767190(c.-346-3870G>A), 51767626(c.-346-4306A>G), 51767870(c.-346-4550C>T), 51767901(c.-346-4581T>C), 51768944(c.-346-5624A>G), 51768992(c.-346-5672C>T), 51769404(c.-346-6084T>C), 51769645(c.-346-6325C>T), 51769702(c.-346-6382T>C), 51770160(c.-346-6840T>A), 51770189(c.-346-6869C>T), 51770275(c.-346-6955A>G), 51770279(c.-346-6959C>G), 51770299(c.-346-6979G>A), 51770504(c.-346-7184C>T), 51770521(c.-346-7201T>G), 51770680(c.-346-7360C>T), 51770736(c.-346-7416G>T), 51770843(c.-346-7523A>G), 51770897(c.-346-7577T>A), 51770904(c.-346-7584G>A), 51770966(c.-346-7646C>T), 51771140(c.-346-7820C>T), 51771278(c.-346-7958A>G), 51771293(c.-346-7973G>C), 51771297(c.-346-7977A>G), 51771300(c.-346-7980A>C), 51771402(c.-346-8082G>T), 51771410(c.-346-8090G>A), 51771885(c.-346-8565G>A), 51771934(c.-346-8614A>G), 51771939(c.-346-8619C>T), 51772069(c.-346-8749T>C), 51772076(c.-346-8756G>A), 51772293(c.-346-8973C>T), 51772404(c.-346-9084T>C), 51772503(c.-346-9183C>G), 51772819(c.-346-9499A>C), 51772910(c.-346-9590G>A), 51772978(c.-346-9658A>G), 51773032(c.-346-9712A>G), 51773048(c.-346-9728A>G), 51773056(c.-346-9736A>G), 51773058(c.-346-9738A>G), 51773132(c.-346-9812G>A), 51773138(c.-346-9818T>C), 51773239(c.-346-9919T>C), 51773246(c.-346-9926C>T), 51773358(c.-346-10038A>T), 51773404(c.-346-10084A>G), 51773409(c.-346-10089A>G), 51773442(c.-346-10122A>G), 51773443(c.-346-10123C>T), 51773449(c.-346-10129C>A), 51773558(c.-346-10238C>T), 51773653(c.-346-10333T>A), 51773681(c.-346-10361C>T), 51773774(c.-346-10454C>T), 51773877(c.-346-10557G>C), 51773878(c.-346-10558T>C), 51773894(c.-346-10574C>T), 51774148(c.-346-10828A>G), 51774184(c.-346-10864T>C), 51774243(c.-346-10923G>A), 51774373(c.-346-11053A>G), 51774486(c.-346-11166T>A), 51774504(c.-346-11184C>T), 51774555(c.-346-11235A>C), 51774557(c.-346-11237A>C), 51774916(c.-346-11596T>C), 51774926(c.-346-11606C>T), 51774994(c.-346-11674A>G), 51775014(c.-346-11694C>T), 51775019(c.-346-11699G>A), 51775104(c.-346-11784G>C), 51775131(c.-346-11811T>C), 51775279(c.-346-11959C>T), 51775565(c.-346-12245A>G), 51775608(c.-346-12288A>G), 51775648(c.-346-12328T>C), 51775729(c.-346-12409G>A), 51775808(c.-346-12488A>G), 51775892(c.-346-12572T>A), 51775908(c.-346-12588A>T), 51775970(c.-346-12650G>A), 51776012(c.-346-12692G>T), 51776042(c.-346-12722C>T), 51776099(c.-346-12779T>C), 51776114(c.-346-12794C>A), 51776116(c.-346-12796C>T), 51776148(c.-346-12828C>T), 51776206(c.-346-12886A>C), 51776286(c.-346-12966C>T), 51776438(c.-346-13118C>T), 51776465(c.-346-13145C>A), 51776466(c.-346-13146T>C), 51776473(c.-346-13153A>G), 51776596(c.-346-13276C>T), 51776959(c.-346-13639C>T), 51777107(c.-346-13787T>C), 51777250(c.-346-13930T>C), 51777710(c.-346-14390G>C), 51777937(c.-346-14617C>T), 51778073(c.-346-14753A>G), 51778311(c.-346-14991T>A), 51778316(c.-346-14996G>T), 51778516(c.-347+14981T>G), 51778611(c.-347+14886C>T), 51778650(c.-347+14847C>T), 51778662(c.-347+14835T>C), 51778718(c.-347+14779G>A), 51778902(c.-347+14595A>C), 51778906(c.-347+14591C>T), 51779303(c.-347+14194G>A), 51779322(c.-347+14175T>C), 51779330(c.-347+14167C>T), 51779518(c.-347+13979T>G), 51779562(c.-347+13935G>A), 51779673(c.-347+13824A>G), 51779692(c.-347+13805T>C), 51779850(c.-347+13647A>G), 51779857(c.-347+13640T>C), 51779873(c.-347+13624C>T), 51779883(c.-347+13614A>G), 51779990(c.-347+13507A>G), 51780066(c.-347+13431T>G), 51780161(c.-347+13336C>A), 51780211(c.-347+13286A>G), 51780249(c.-347+13248G>A), 51780256(c.-347+13241C>T), 51780261(c.-347+13236T>C), 51780337(c.-347+13160T>C), 51780462(c.-347+13035A>G), 51780508(c.-347+12989G>A), 51780587(c.-347+12910A>G), 51780633(c.-347+12864C>T), 51780690(c.-347+12807T>C), 51780739(c.-347+12758C>G), 51780747(c.-347+12750G>A), 51780776(c.-347+12721T>G), 51780816(c.-347+12681T>C), 51780831(c.-347+12666T>A), 51780840(c.-347+12657C>T), 51780850(c.-347+12647G>A), 51780886(c.-347+12611A>C), 51780895(c.-347+12602G>A), 51781091(c.-347+12406T>C), 51781148(c.-347+12349A>G), 51781224(c.-347+12273A>G), 51781424(c.-347+12073G>A), 51781474(c.-347+12023T>G), 51781507(c.-347+11990A>G), 51781632(c.-347+11865A>G), 51781704(c.-347+11793G>A), 51781874(c.-347+11623C>T), 51781957(c.-347+11540C>T), 51781982(c.-347+11515A>G), 51782012(c.-347+11485A>G), 51782056(c.-347+11441C>T), 51782141(c.-347+11356A>G), 51782243(c.-347+11254A>G), 51782252(c.-347+11245A>G), 51782363(c.-347+11134G>T), 51782491(c.-347+11006T>C), 51782557(c.-347+10940T>A), 51782840(c.-347+10657T>C), 51782841(c.-347+10656T>A), 51782856(c.-347+10641C>T), 51783093(c.-347+10404A>G), 51783115(c.-347+10382A>C), 51783218(c.-347+10279G>A), 51783428(c.-347+10069C>T), 51783442(c.-347+10055G>T), 51783455(c.-347+10042T>C), 51783528(c.-347+9969G>C), 51783529(c.-347+9968T>C), 51783584(c.-347+9913T>C), 51783585(c.-347+9912G>T), 51783587(c.-347+9910C>T), 51783633(c.-347+9864C>T), 51783883(c.-347+9614C>T), 51784100(c.-347+9397T>C), 51784144(c.-347+9353T>G), 51784198(c.-347+9299A>T), 51784254(c.-347+9243T>C), 51784430(c.-347+9067C>T), 51784476(c.-347+9021T>A), 51784508(c.-347+8989C>T), 51784589(c.-347+8908C>T), 51784616(c.-347+8881A>G), 51784641(c.-347+8856C>T), 51784759(c.-347+8738G>A), 51784766(c.-347+8731G>A), 51784876(c.-347+8621C>A), 51784898(c.-347+8599C>T), 51784900(c.-347+8597C>A), 51784902(c.-347+8595A>T), 51784904(c.-347+8593C>A), 51784906(c.-347+8591C>T), 51784908(c.-347+8589C>A), 51784922(c.-347+8575C>T), 51784975(c.-347+8522G>A), 51785095(c.-347+8402A>G), 51785183(c.-347+8314T>G), 51785244(c.-347+8253A>G), 51785653(c.-347+7844C>T), 51785961(c.-347+7536C>T), 51786242(c.-347+7255G>A), 51786313(c.-347+7184A>G), 51786345(c.-347+7152A>T), 51786538(c.-347+6959C>A), 51786554(c.-347+6943G>A), 51786684(c.-347+6813T>C), 51786706(c.-347+6791A>T), 51786735(c.-347+6762C>T), 51786752(c.-347+6745G>A), 51786839(c.-347+6658G>A), 51786897(c.-347+6600C>G), 51786911(c.-347+6586G>A), 51786943(c.-347+6554A>G), 51786958(c.-347+6539G>C), 51787206(c.-347+6291G>A), 51787216(c.-347+6281T>G), 51787225(c.-347+6272C>T), 51787346(c.-347+6151C>T), 51787522(c.-347+5975A>G), 51787726(c.-347+5771G>A), 51787817(c.-347+5680G>A), 51787834(c.-347+5663T>C), 51787835(c.-347+5662G>T), 51787836(c.-347+5661T>C), 51787839(c.-347+5658G>A), 51787842(c.-347+5655T>C), 51787934(c.-347+5563T>C), 51787976(c.-347+5521T>C), 51788020(c.-347+5477C>T), 51788072(c.-347+5425C>T), 51788110(c.-347+5387A>T), 51788136(c.-347+5361T>A), 51788485(c.-347+5012G>A), 51788705(c.-347+4792C>T), 51788810(c.-347+4687A>G), 51788842(c.-347+4655A>G), 51788849(c.-347+4648C>T), 51789161(c.-347+4336G>A), 51789453(c.-347+4044T>C), 51789519(c.-347+3978A>C), 51789665(c.-347+3832G>A), 51789695(c.-347+3802C>A), 51789699(c.-347+3798G>T), 51789730(c.-347+3767G>A), 51790039(c.-347+3458C>A), 51790047(c.-347+3450C>T), 51790164(c.-347+3333G>A), 51790374(c.-347+3123T>G), 51790409(c.-347+3088C>T), 51790479(c.-347+3018T>G), 51790481(c.-347+3016T>C), 51790483(c.-347+3014A>T), 51790626(c.-347+2871T>G), 51790662(c.-347+2835G>C), 51790715(c.-347+2782G>A), 51790849(c.-347+2648G>A), 51791160(c.-347+2337A>G), 51791348(c.-347+2149C>T), 51791700(c.-347+1797C>T), 51791772(c.-347+1725A>G), 51791935(c.-347+1562T>C), 51792040(c.-347+1457A>G), 51792141(c.-347+1356A>T), 51792272(c.-347+1225G>A), 51792608(c.-347+889C>T), 51792652(c.-347+845T>A), 51792749(c.-347+748G>A), 51792801(c.-347+696C>A), 51793028(c.-347+469T>G), 51793094(c.-347+403A>G), 51793394(c.-347+103T>C), 51793491(c.-347+6C>G), -1kb 51696589(c.6020G>C), 51696606(c.6003C>T), 51696643(c.5966A>G), 51696715(c.5894C>T), 51696747(c.5862G>C), 51697072(c.5537G>A), 51697104(c.5505C>T), 51697580(c.5029G>A), 51697600(c.5009G>A), 51698214(c.4395T>C), 51698335(c.4274G>T), 51698528(c.4081T>C), 51698763(c.3846G>A), 51698767(c.3842G>A), 51698797(c.3812A>G), 51698862(c.3747G>C), 51698870(c.3739A>G), 51699009(c.3600A>G), 51699244(c.3365T>C), 51699300(c.3309A>T), 51699595(c.3014T>C), 51699615(c.2994G>A), 51699657(c.2952C>T), 51699699(c.2910T>A), 51699736(c.2873T>C), 51699761(c.2848C>T), 51699913(c.2696C>T), 51700469(c.2140A>T), 51700487(c.2122T>C), 51700492(c.2117G>A), 51700531(c.2078A>G), 51700573(c.2036A>G), 51700687(c.1922C>A), 51700689(c.1920G>T), 51700702(c.*1907A>C),
Insertions	+1kb 51797206 (c.-71878_-71877insC), 51797413 (c.-72085_-72084insCTGGT), 5'UTR CDS 3'UTR 51702068 (c.539_540dupTT), INTRON 51706549 (c.1447-1305_1447-1304insCGG), 51707587 (c.1446+1285_1446+1287dupAAA), 51710432 (c.1108-300_1108-299dupGT), 51717858 (c.414+2647_414+2648insG), 51718043 (c.414+2462dupA), 51721928 (c.315+389_315+390insGG), 51722869 (c.253-490_253-489insCGACA), 51722994 (c.252+547_252+548dupAA), 51728968 (c.-213-3427_-213-3426insC), 51730164 (c.-214+4342_-214+4343insAA), 51730296 (c.-214+4210_-214+4211insTCGA), 51730506 (c.-214+4000dupG), 51730682 (c.-214+3823_-214+3824dupGT), 51731591 (c.-214+2914_-214+2915dupCT), 51732380 (c.-214+2126dupC), 51735876 (c.-277-1307dupA), 51737587 (c.-277-3018dupG), 51738357 (c.-277-3788_-277-3787insG), 51745354 (c.-277-10785dupG), 51747126 (c.-277-12557_-277-12556insA), 51751125 (c.-278+12126_-278+12127insAGAGAC), 51752568 (c.-278+10683_-278+10684insCCT), 51754493 (c.-278+8758_-278+8759insG), 51755074 (c.-278+8177_-278+8178insA), 51755582 (c.-278+7669_-278+7670insCTTCCT), 51756422 (c.-278+6829dupT), 51756871 (c.-278+6380_-278+6381insAGA), 51761141 (c.-278+2110_-278+2111insCTGTTCTCAGTTCT), 51763846 (c.-346-527_-346-526insGG), 51766607 (c.-346-3288dupG), 51766611 (c.-346-3292_-346-3291insG), 51770578 (c.-346-7259_-346-7258insAAT), 51772648 (c.-346-9329_-346-9328insAC), 51773045 (c.-346-9726_-346-9725insAC), 51774774 (c.-346-11455_-346-11454insGG), 51775459 (c.-346-12140_-346-12139insTG), 51775530 (c.-346-12211_-346-12210insG), 51775532 (c.-346-12213_-346-12212insG), 51775569 (c.-346-12250dupA), 51775571 (c.-346-12252_-346-12251insA), 51779122 (c.-347+14374dupA), 51781103 (c.-347+12393_-347+12394insA), 51782825 (c.-347+10671_-347+10672insTT), 51783073 (c.-347+10423_-347+10424insT), 51783078 (c.-347+10418_-347+10419insT), 51783613 (c.-347+9883_-347+9884insG), 51784242 (c.-347+9254_-347+9255insA), 51785539 (c.-347+7957_-347+7958insC), 51786330 (c.-347+7166dupT), 51788388 (c.-347+5108_-347+5109insCCCCCA), 51789504 (c.-347+3992_-347+3993insG), -1kb 51696800 (c.5808dupA), 51699923 (c.2685_*2686insTAC),
Deletions	+1kb 51793889 (c.-68562_-68561delAA), 51794413 (c.-69087_-69085delTTA), 51797415 (c.-72089_-72087delACA), 5'UTR CDS 3'UTR 51701396 (c.1210_1212delACC), INTRON 51705530 (c.1447-286delG), 51705543 (c.1447-302_1447-299delAAAA), 51706290 (c.1447-1047_1447-1046delAG), 51708346 (c.1446+528delA), 51708595 (c.1446+279delA), 51710540 (c.1108-407delC), 51710549 (c.1108-416delC), 51710551 (c.1108-422_1108-418delTTCTC), 51710600 (c.1108-468_1108-467delAA), 51710609 (c.1108-478_1108-476delAAA), 51713217 (c.623-389_623-388delTT), 51715090 (c.415-207_415-204delGCAA), 51715627 (c.415-742_415-741delAG), 51716655 (c.415-1774_415-1769delTTTTTT), 51716802 (c.415-1921_415-1916delTCCCCC), 51717932 (c.414+2572_414+2573delGT), 51721233 (c.316-632_316-630delCAA), 51723786 (c.107-107_107-99delCCTGGGGTG), 51724280 (c.107-594_107-593delAG), 51724326 (c.107-639delA), 51724523 (c.106+699_106+700delCA), 51724789 (c.106+431_106+434delTGAA), 51726416 (c.-213-875delC), 51728173 (c.-213-2633_-213-2632delAC), 51729096 (c.-213-3559_-213-3555delTTTTT), 51729238 (c.-213-3698_-213-3697delGA), 51729445 (c.-213-3904delC), 51733404 (c.-214+1100_-214+1102delCTC), 51734159 (c.-214+346_-214+347delGT), 51734837 (c.-277-270_-277-268delTTT), 51736718 (c.-277-2153_-277-2149delAAAAA), 51741062 (c.-277-6493delG), 51741689 (c.-277-7120delC), 51742147 (c.-277-7580_-277-7578delATA), 51742514 (c.-277-7946_-277-7945delTA), 51743018 (c.-277-8449delT), 51743094 (c.-277-8525delA), 51748381 (c.-277-13815_-277-13812delGTAT), 51748532 (c.-277-13963delG), 51749626 (c.-278+13623_-278+13625delTTC), 51751264 (c.-278+11986_-278+11987delTG), 51752028 (c.-278+11223delG), 51754142 (c.-278+9102_-278+9109delCTGCCTGC), 51754667 (c.-278+8582_-278+8584delCTG), 51755292 (c.-278+7959delG), 51756755 (c.-278+6493_-278+6496delCTGT), 51757645 (c.-278+5603_-278+5606delCATA), 51758833 (c.-278+4418delA), 51759313 (c.-278+3936_-278+3938delTTA), 51760771 (c.-278+2480delG), 51763892 (c.-346-584_-346-573delGGGGGGGCGGGT), 51765309 (c.-346-1995_-346-1990delCACATA), 51765617 (c.-346-2298delT), 51765649 (c.-346-2337_-346-2330delGAACGAAC), 51765945 (c.-346-2628_-346-2626delGAA), 51766072 (c.-346-2753delA), 51766587 (c.-346-3271_-346-3268delTTGG), 51767985 (c.-346-4667_-346-4666delGT), 51769314 (c.-346-5995delC), 51770974 (c.-346-7656_-346-7655delTG), 51771195 (c.-346-7877_-346-7876delTT), 51771506 (c.-346-8192_-346-8187delTGTGAG), 51771790 (c.-346-8472_-346-8471delAC), 51773511 (c.-346-10195_-346-10192delTTCT), 51774726 (c.-346-11407delA), 51774748 (c.-346-11431_-346-11429delGGA), 51774808 (c.-346-11492_-346-11489delATGG), 51774818 (c.-346-11502_-346-11499delGGAT), 51781776 (c.-347+11716_-347+11720delCCGAG), 51782697 (c.-347+10798_-347+10799delAA), 51783066 (c.-347+10426_-347+10430delCCCAA), 51783722 (c.-347+9771_-347+9774delTGTG), 51784552 (c.-347+8944delC), 51785898 (c.-347+7598delA), 51788442 (c.-347+5052_-347+5054delGTT), 51789640 (c.-347+3854_-347+3856delTCT), 51790389 (c.-347+3107delT), 51790483 (c.-347+3010_-347+3013delCCGT), -1kb 51698778 (c.3829_3830delCG), 51699376 (c.3227_3232delGTGAGA),
coding sequence substitutions
premature termination by the nucleotide substitution	0
synonymous num	10
non-synonymous num	1
synonymous substitutions	51702741 (p.Gln818Gln), 51703020 (p.Val725Val), 51703341 (p.Asp618Asp), 51704972 (p.Gly548Gly), 51708968 (p.Ala451Ala), 51713765 (p.Gly183Gly), 51713801 (p.Gly171Gly), 51723594 (p.Arg67Arg), 51723603 (p.Val64Val), 51725273 (p.Arg19Arg),
non-synonymous substitutions	51710124 (p.Ser373Asn),
B6 transcript (ENSMUST00000110040)	MRMCAPVRGLFLALVVVLRTAVAFAPVPRLTWEHGEVGLVQFHKPGIFNYSALLMSEDKD TLYVGAREAVFAVNALNISEKQHEVYWKVSEDKKSKCAEKGKSKQTECLNYIRVLQPLSS TSLYVCGTNAFQPTCDHLNLTSFKFLGKSEDGKGRCPFDPAHSYTSVMVGGELYSGTSYN FLGSEPIISRNSSHSPLRTEYAIPWLNEPSFVFADVIQKSPDGPEGEDDKVYFFFTEVSV EYEFVFKLMIPRVARVCKGDQGGLRTLQKKWTSFLKARLICSKPDSGLVFNILQDVFVLR APGLKEPVFYAVFTPQLNNVGLSAVCAYTLATVEAVFSRGKYMQSATVEQSHTKWVRYNG PVPTPRPGACIDSEARAANYTSSLNLPDKTLQFVKDHPLMDDSVTPIDNRPKLIKKDVNY TQIVVDRTQALDGTFYDVMFISTDRGALHKAVILTKEVHVIEETQLFRDSEPVLTLLLSS KKGRKFVYAGSNSGVVQAPLAFCEKHGSCEDCVLARDPYCAWSPAIKACVTLHQEEASSR GWIQDMSGDTSSCLDKSKESFNQHFFKHGGTAELKCFQKSNLARVVWKFQNGELKAASPK YGFVGRKHLLIFNLSDGDSGVYQCLSEERVRNKTVSQLLAKHVLEVKMVPRTPPSPTSED AQTEGSKITSKMPVASTQGSSPPTPALWATSPRAATLPPKSSSGTSCEPKMVINTVPQLH SEKTVYLKSSDNRLLMSLLLFIFVLFLCLFSYNCYKGYLPGQCLKFRSALLLGKKTPKSD FSDLEQSVKETLVEPGSFSQQNGDHPKPALDTGYETEQDTITSKVPTDREDSQRIDELSA RDKPFDVKCELKFADSDADGD*
MSMv4 transcript	MRMCAPVRGLFLALVVVLRTAVAFAPVPRLTWEHGEVGLVQFHKPGIFNYSALLMSEDKD TLYVGAREAVFAVNALNISEKQHEVYWKVSEDKKSKCAEKGKSKQTECLNYIRVLQPLSS TSLYVCGTNAFQPTCDHLNLTSFKFLGKSEDGKGRCPFDPAHSYTSVMVGGELYSGTSYN FLGSEPIISRNSSHSPLRTEYAIPWLNEPSFVFADVIQKSPDGPEGEDDKVYFFFTEVSV EYEFVFKLMIPRVARVCKGDQGGLRTLQKKWTSFLKARLICSKPDSGLVFNILQDVFVLR APGLKEPVFYAVFTPQLNNVGLSAVCAYTLATVEAVFSRGKYMQSATVEQSHTKWVRYNG PVPTPRPGACIDNEARAANYTSSLNLPDKTLQFVKDHPLMDDSVTPIDNRPKLIKKDVNY TQIVVDRTQALDGTFYDVMFISTDRGALHKAVILTKEVHVIEETQLFRDSEPVLTLLLSS KKGRKFVYAGSNSGVVQAPLAFCEKHGSCEDCVLARDPYCAWSPAIKACVTLHQEEASSR GWIQDMSGDTSSCLDKSKESFNQHFFKHGGTAELKCFQKSNLARVVWKFQNGELKAASPK YGFVGRKHLLIFNLSDGDSGVYQCLSEERVRNKTVSQLLAKHVLEVKMVPRTPPSPTSED AQTEGSKITSKMPVASTQGSSPPTPALWATSPRAATLPPKSSSGTSCEPKMVINTVPQLH SEKTVYLKSSDNRLLMSLLLFIFVLFLCLFSYNCYKGYLPGQCLKFRSALLLGKKTPKSD FSDLEQSVKETLVEPGSFSQQNGDHPKPALDTGYETEQDTITSKVPTDREDSQRIDELSA RDKPFDVKCELKFADSDADGD*
homology	99.88 (862 / 862)

Exon Detail Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Sema4d (ENSMUSG00000021451)
Transcript ID	ENSMUST00000110040


..........CAAGGGCAGAAAAGGACATGCCCTGTGGCTGCAGTGTGTGTGTGTGTCTG
TGTGTGTGTACCCATGCAATATGCCATGAGGTCAACCCAGGTGTTGTCCACTTAGTTTTA
GGAGACAGGGTCCCTTACTGAAATCTGAGTCTGACTTCGGATTAAGTAAGGCAGGCTGGC
TGGCCAGTGAACTCCATCCAGGGTTCCACCAATAGTCTCTGCCTCAACACTGGGATTACA
ACAAAGCACCACTGTCTGGGTTTTTTTTTAATCATAGGTTCTGGAGCACCAACCTCAGAA
AGCATGTTAAGGACCTGGCTATGTCTACCCTTTGTACCAACCAACTTCGGAAGGCCCAGA
ATTAGTTAGAAATGTATCTCATTGGGAGCTGCATACAGGAAGCCTTGGTCCATGGGAAGA
ACCACCCACACCTTGCATTGAGAACCCCAAAGGGTCTATCCTAGATCATAAAGGTAAGAG
CCCAGCATCTCTGGGGTCAACGCTGGTGACCCCAGAGCATGGGGCACAGGAGACTTTGGG
GACCTGGACGAGCAGGCTGGATCATTAGGAGGCTGAAAGGATCAAAAGGCTCCTTTTGCT
GGTAATCTCCTCTGTTTTCAAGAGACCAGACTTGGGTAGGAAAGAGCCCCTGGGGTCTGG
ACCATGGGGCTTTGGGGGATGGGGGACGGGGGGGGGGGGACACGGGGGAAGAGGACGAGG
GAGTTGGATGAAAAGAGGAAGAGGTGGTGGAAGGTAAATGGGGAAGGAAAGGAAGGGAGG
GAGAAAGGAAACAAGAGGGGAGCAGGAGAAAAAGACTGGGGTAGGTGAAGACAGGGGCGG
GGCGCGGGAGGGCAAGGAAGAAGGGAGAGAGGTTGGGGTGAGAGGAGGGACTAGGAGGAA
GGGGGAGGGGCGAAGGGAGGGAAGAGACGGGAGGGGGAGGGGAGGAGGCGGGAAGGGAGG
GAGAGGGGGTGGGGCCTGCACGCTAGCCCCGCGCCCTCCTTCCCCACGCC
GGCCTCCGCTCCCTCTCGCGCCGCAGCATCTCCGCGCGTCTCCCGGCCTCCCCGACTCAAGCTCCTGGCGCCGTTCGCCTCTGTCGTCGCTGCCACCAACGCCGCCGCCATTCTTGGCGCGGAGCTGGCCTGGCCAGCCCCCGCCGAGAGCCGCCGCGGGTCGGACGCGCGCTCCAG
GTAAGGGACTGGGCCGGCGCGGGAG..........CCCCCCTTTCCAATTCTTGTTTCAG
ACCCTGGTAACACCACAGGAACACAGCCAAGTCCTGAATACCGACATGTCTGACAGTGCTGATCCCTAG
GTGAGTAACCAAATCCACTGCCAAG..........ACTCTTAGTCTCTCATTACTTTCAG
AGATGTCTTCCTGAAGCTTCCATTCTAAAGGTGCCAGGAACAACCCCAGAGACTCACGGCACAG
GTAAATCATTTCGTGTATGATTTCT..........GTCTCGTCCTTTCCTTCTTTTGCAG
GTCAGACGGGAACACCGGCAGCCTTGGCATGACGTCGTGAAGGTGGCCATTGCTAACCTGACATGTGGGGACTCAGGAACCCCACCCCTTATGGGCTCCAGTCTGTGCTGCTGGCCCCAGCTCTGGGGCTCTAAGAGGTCCTTGCTGCTACCCCACAGCAGCCTGCTGCCATCCATGTGTGCCTGTTGCTGAAGGCCTCGGTGGCCCCTGCCCATGAGGATGTGTGCCCCCGTTAGGGGGCTGTTCTTGGCCCTGGTGGTAGTGTTGAGGACCGCGGTGGCATTTGCACCTGTGCCTCGGCTCACCTGGGAACATGGAG
GTAAGTGAGTGTGAGCCATGAGTGA..........TTCCTTCCCCCCTCTGCTGCCACAG
AGGTAGGTCTGGTGCAGTTTCACAAGCCAGGCATCTTTAACTACTCGGCCTTGCTGATGAGTGAGGACAAAGACACTCTGTATGTGGGCGCCCGAGAAGCAGTCTTTGCAGTGAATGCGCTGAACATCTCTGAGAAGCAACATGAG
GTAGGTTCCATGGCCTCCCAGCCAT..........GCTCTGACACGTTCCTCCCTCACAG
GTATATTGGAAGGTCTCTGAAGACAAAAAATCCAAGTGTGCAGAGAAGGGGAAATCAAAGCAG
GTAATTGACCGCAAGTACAAAGAGC..........TGTTAATGGGGTGTTTCCCTTGCAG
ACGGAATGCCTAAACTACATTCGAGTACTACAGCCACTAAGCAGCACTTCCCTCTATGTGTGTGGGACCAATGCGTTCCAGCCCACCTGTGACCACCTG
GTAAGACCACAACATATCCCTGTGT..........ATGTTTTCTATTTATTCCATTGTAG
AACTTGACATCCTTCAAGTTTCTGGGGAAAAGTGAAGATGGCAAAGGAAGATGCCCCTTCGACCCCGCCCACAGCTACACATCAGTCATGGTTG
GTGAGTCCTGCGTCTGAGGCTCTTT..........CTCTACTCCCTCTCCTCCACCACAG
GGGGTGAGCTCTACTCTGGGACGTCCTATAATTTCTTGGGTAGTGAACCCATCATCTCTCGAAACTCTTCCCACAGTCCCTTGAGGACGGAGTATGCCATCCCGTGGCTGAACG
GTAAGTGTGTGCTGCCAGCCTTGTG..........ACCACCCTGTGATGCCACCCCACAG
AGCCTAGCTTCGTCTTTGCTGACGTGATCCAGAAAAGCCCAGATGGTCCGGAGGGTGAAGATGACAAGGTCTACTTCTTTTTTACGGAGGTATCCGTGGAGTACGAATTCGTCTTCAAGTTGATGATCCCGCGAGTTGCCAGGGTGTGCAAG
GTGGGTGCTGTCTCCCTGTTCCCAC..........CCATGTGCTGTCTCTGGAATTCCAG
GGCGACCAGGGCGGCCTGCGGACTTTGCAAAAAAAGTGGACCTCCTTCCTAAAGGCCAGGCTGATCTGCTCCAAGCCAGACAGTGGCCTGGTCTTCAACATACTTCAGGATGTGTTTGTGCTGAGGGCCCCGGGCCTCAAGGAGCCTGTGTTCTATGCGGTCTTCACCCCACAGCT
GTGAGTTCACTTGTGAGTCCCTTGG..........CACTCTCACGGATTCCCCTCCACAG
GAACAATGTGGGTCTGTCAGCGGTGTGCGCCTACACACTGGCCACGGTGGAGGCAGTCTTCTCCCGTGGAAAGTACATGCAGAGTGCCACAGTGGAGCAGTCTCACACCAAGTGGGTGCGCTACAATGGCCCAGTGCCCACTCCCCGACCTGGAGCG
GTAAGCAGGGTCTCGAGCTCTGGGG..........TGACCGCGGTGCTTTTACCCCACAG
TGTATCGACAATGAGGCCCGGGCAGCCAACTACACCAGCTCCTTGAATCTCCCAGACAAAACACTGCAGTTTGTAAAAGACCACCCTTTGATGGATGACTCAGTGACCCCGATAGACAACAGACCCAAGCTGATCAAAAAAGATGTAAACTACACCCAGATAGTGGTAGACAGGACCCAGGCCCTGGATGGGACTTTCTACGACGTCATGTTCATCAGCACAG
GTGGGTTCCTTGGTAAGATTGGGAA..........GCTCACCTGTGTTCTGACCTTGCAG
ACCGGGGAGCTCTGCATAAAGCCGTCATCCTCACAAAAGAGGTGCATGTCATCGAGGAGACCCAACTCTTCCGGGACTCTGAACCGGTCCTAACTCTGCTGCTATCGTCAAAGAAG
GTAATGTGGGTTTGGTTGGTTGGTT..........CTTGCCATCCGTCTCTCATACACAG
GGGAGGAAGTTTGTCTATGCAGGCTCCAACTCTGGAGTGGTCCAAGCGCCCCTGGCATTCTGCGAAAAGCACGGTAGCTGTGAAGACTGTGTGTTAGCACGGGACCCCTACTGTGCCTGGAGCCCAGCCATCAAGGCCTGTGTTACCCTGCACCAGGAAGAGGCCTCCAGCAG
GTATGCCTAAGGATGGGGCTGTGTG..........GTAATGTGCGCCTGTTGTCTTCTAG
GGGCTGGATTCAGGACATGAGCGGCGACACATCCTCATGCCTGG
GTGAGTGGATCTCCTTTGCTTCCCA..........GAGCACGTTTATTTTGATGTTCCAG
ATAAGAGTAAAGAAAGTTTCAACCAGCATTTTTTCAAGCACGGCGGCACAGCGGAACTCAAATGTTTCCAAAAGTCCAACCTAGCCCGGGTGGTATGGAAGTTCCAGAATGGCGAGTTGAAGGCCGCAAGTCCCAAGTACGGCTTTGTGGGCAGGAAGCACCTGCTCATCTTCAACCTGTCGGACGGAGATAGCGGCGTGTACCAGTGCCTGTCAGAGGAAAGGGTGAGGAATAAAACGGTCTCCCAGCTGCTGGCCAAGCACGTTCTGGAAGTGAAGATGGTACCTCGGACCCCCCCCTCACCTACCTCAGAGGATGCTCAGACAGAAGGTAGTAAGATCACATCCAAAATGCCGGTTGCATCTACCCAGGGGTCCTCTCCCCCTACCCCGGCTCTGTGGGCAACCTCCCCCAGAGCCGCCACCCTACCTCCCAAGTCCTCCTCCGGCACATCCTGTGAACCAAAGATGGTCATCAACACGGTCCCCCAGCTCCACTCAGAGAAGACGGTATATCTCAAGTCCAGTGACAACCGCCTGCTCATGTCTCTCCTCCTCTTCATCTTTGTCCTCTTCCTCTGCCTCTTTTCCTACAACTGCTACAAGGGCTACCTGCCCGGACAGTGCTTAAAATTCCGCTCAGCCCTGCTGCTTGGAAAGAAAACACCCAAGTCAGACTTCTCTGACCTGGAGCAGAGTGTGAAGGAGACACTGGTCGAGCCTGGGAGCTTCTCCCAGCAGAACGGCGACCACCCCAAGCCAGCCCTGGATACGGGCTATGAAACGGAGCAAGACACCATCACCAGCAAAGTCCCCACGGATCGTGAGGACTCGCAACGGATCGATGAACTCTCTGCCCGGGACAAACCGTTTGATGTCAAGTGTGAACTGAAGTTTGCAGATTCGGATGCTGACGGGGACTGAGGCCAGCGTGTCCCAGCCCATGCCCCTCTGTCTTCGTGGAGAGTGTTGTGTTGAGCCCATTCAGTAGCCGAGTCTTGTCACTCTGTGCCAGCCTCAGTCCTGTGTCCCTTTTTCTCTTGGGTTGAGCCTGTGGCTCATCCCCTTTGTCCTTTTGGGAAGCAAGTATCTATTCCAGTCTCAAGTCCTGCAGTTGCTGGAGCGCTTACGCACCTGAGCCCTTTGTGTCCTGGGGGAGAGATGGCCACCTCCGTGGGCTGCGAAGAGCCACCCCTTCCTCTTCCGATTCTCCTAGCAGCCACTCAGAGATAATTTAATTCCAGATTGGAAACGCCCTTTTAGTTTATCAGATTGGTAACTTACATCCTGCTGCCCAGATGGCACGGACAGTTTTCTTTCACTTAATTTTTTTTTTTTTTTTAAGGATTTTCGCTCCTATTGTGTTGATGTCTTAGGTCATTTTCTTTTTTTCTTTCTCTTTTTTTATTACCAGAGGAGATGTTTTAATATTCATGAGAAGAGGAACATTTTCTAGATTTTTTTGTTGTTATATATTGAGATATAAAATATGGCTATGTTGCTTAAGATTCTCAGGGATAGACTTATTTTTGTTAACTTCATTCTTTCCTGCTGTTAGGAACATAGGCCTAAAATTGTCTCTTGAGTTTGCTCACCCTTTTGTTTTGGTAGGGTTTTTTTGTTGTTGCTGTTATTGTTTCTAGTTTGTAATCTTATTCATTTTGAAGGATTTTTCTTTCTGAACTTTTTAAATTTTTATATTTTCCTGCCATACATCTACAAAGTGGGTTTTGAGTGAGGGCAGGTGGCCCAGTGGCTTCCGGTGGCGACTGAGCTGGTCCCACGAGGGGAGGAGGGTTTATATACCCCATGACCCTGCTGCTTCTTGGCGCCTCCTGCCCATGAGGATCACATCCTGTCTCTCCTTGCTTCCATCTCTCATCACTGCCCTTGGACTTCCGCCTTGACTGTCCACGAAAGACAGAAATGGGTTGGGTAGTTGGGCTCCCAACCTCGGATGGTGACCGCAACATCCCGTGTGGGCGGCCGGCCGCTCCTGCAGCCCGACTCTCCTGCCAGTGTCTTTCAGGATGTCAACGGGTGGTACGATTCTGGCATTTGTTTCTCGCTCACCGTGTGTGGAACACTCATTCCATGTAGAGGGTGACGAACTCTGGATATCCCCCCACCCCCACCCCGTGCCGTGTAGACACTCATCTTCTGCATGACATGATCTACCATTCGGTGTAAACATTTGTGTTTATAAGATTTACTTTGTTTTTATTTTTCTACTTGGAACTGTACACATTTGAAAAGTACCCAAATAAACCAGAAGCTTTATCGTTGA
CTGGGCCAGCCTTTGCCTTAGTGTGGAGGCTGGGGGCGGTGGGGTGTCCTCCTGTCCCTC
TGTGACGGCCCTGGGTGGGGGTTGGTCCTGGGATCTTGTCTGTTCTCATCCCATGTGTCC
GGTTTCTTGCTTTACCTTCTCCGTCATGGGAATGGTTCTGACGACTTCTTCCTCAGTGCC
TTCTTTTGTGTCCTCTGTCTCACAGCCTCATCTCCTAAGTCCTTCCCTCCTCCTGGCTCC
TCTCTATCCTGTCTGGGCCCTGACTCATCTTCTCCCAGAAGCCCTCGGCCGGCCTTGGCC
TCGGGGCCCAACAGCCGTAAGCAGGTCACCTTACTGCCACCCTTCTTGAGTGACCAGGCG
CAGAAGGTGCAGGCGCTGGGGACCTTCTACCTCTTCTGCCAGGCCACAGGTGAGTTGAGG
GGCCTGAGTGTCCATGGCTGTCCCCTCGCTCTGCCCTTGCTCCTAGCTGTGCCTGAGGTT
CAGCTGTCTGTGCTGATCCCGGGATCAACTGTCAACCGTGCAACGCTGTTGCTAGGGCTG
CCGCAGGGGTCATCCATCATCTCGCCGTAAAGGTACAGGTGTTGGGTCTTCTGAGCATGT
AGGCTGCTGTGCCCAATGTTGTATGTCAGAAAACTGGACCTACAGGGCAGCAGAGAACCA
GATGAGGCCACGGTTTGCTAACCTGGGTTAGGTAGGGAATTCAAGGCCAACCCCGGGCAA
CTTATGAGAACCCTGTCTTGGAGTTTTAAAATAAGAATCAGGATACATCCAGTGGTTGAA
TGTGTGACTAATGTGTACAAGGTCCCAGCCACAGCATAAATAAATACATAAATGCGTGAA
GTCCATAAGGTGGAGGTTTTCTCCCTCTGCTGGAGACTATCACATAAGGACATGGACTCT
TGAAAGATGGTAGTTTACCCAAACCATTCTTTAGCTCAGAGATACCCATAGCCCCATCTT
TCCCTGTGGGCTTTGGCCTCTGCACAGAAGTGAGGAATAG..........

No.	Exon / Intron	Start	End	Start Phase	End Phase	Length	Sequence
	5' upstream sequence						..........CAAGGGCAGAAAAGGACATGCCCTGTGGCTGCAGTGTGTGTGTGTGTCTG TGTGTGTGTACCCATGCAATATGCCATGAGGTCAACCCAGGTGTTGTCCACTTAGTTTTA GGAGACAGGGTCCCTTACTGAAATCTGAGTCTGACTTCGGATTAAGTAAGGCAGGCTGGC TGGCCAGTGAACTCCATCCAGGGTTCCACCAATAGTCTCTGCCTCAACACTGGGATTACA ACAAAGCACCACTGTCTGGGTTTTTTTTTAATCATAGGTTCTGGAGCACCAACCTCAGAA AGCATGTTAAGGACCTGGCTATGTCTACCCTTTGTACCAACCAACTTCGGAAGGCCCAGA ATTAGTTAGAAATGTATCTCATTGGGAGCTGCATACAGGAAGCCTTGGTCCATGGGAAGA ACCACCCACACCTTGCATTGAGAACCCCAAAGGGTCTATCCTAGATCATAAAGGTAAGAG CCCAGCATCTCTGGGGTCAACGCTGGTGACCCCAGAGCATGGGGCACAGGAGACTTTGGG GACCTGGACGAGCAGGCTGGATCATTAGGAGGCTGAAAGGATCAAAAGGCTCCTTTTGCT GGTAATCTCCTCTGTTTTCAAGAGACCAGACTTGGGTAGGAAAGAGCCCCTGGGGTCTGG ACCATGGGGCTTTGGGGGATGGGGGACGGGGGGGGGGGGACACGGGGGAAGAGGACGAGG GAGTTGGATGAAAAGAGGAAGAGGTGGTGGAAGGTAAATGGGGAAGGAAAGGAAGGGAGG GAGAAAGGAAACAAGAGGGGAGCAGGAGAAAAAGACTGGGGTAGGTGAAGACAGGGGCGG GGCGCGGGAGGGCAAGGAAGAAGGGAGAGAGGTTGGGGTGAGAGGAGGGACTAGGAGGAA GGGGGAGGGGCGAAGGGAGGGAAGAGACGGGAGGGGGAGGGGAGGAGGCGGGAAGGGAGG GAGAGGGGGTGGGGCCTGCACGCTAGCCCCGCGCCCTCCTTCCCCACGCC
1	EXON 1	51,793,497	51,793,673	-	-	177	GGCCTCCGCTCCCTCTCGCGCCGCAGCATCTCCGCGCGTCTCCCGGCCTCCCCGACTCAA GCTCCTGGCGCCGTTCGCCTCTGTCGTCGCTGCCACCAACGCCGCCGCCATTCTTGGCGC GGAGCTGGCCTGGCCAGCCCCCGCCGAGAGCCGCCGCGGGTCGGACGCGCGCTCCAG
	INTRON 1 - 2	51,763,321	51,793,496			30,176	GTAAGGGACTGGGCCGGCGCGGGAG..........CCCCCCTTTCCAATTCTTGTTTCAG
2	EXON 2	51,763,252	51,763,320	-	-	69	ACCCTGGTAACACCACAGGAACACAGCCAAGTCCTGAATACCGACATGTCTGACAGTGCT GATCCCTAG
	INTRON 2 - 3	51,734,571	51,763,251			28,681	GTGAGTAACCAAATCCACTGCCAAG..........ACTCTTAGTCTCTCATTACTTTCAG
3	EXON 3	51,734,507	51,734,570	-	-	64	AGATGTCTTCCTGAAGCTTCCATTCTAAAGGTGCCAGGAACAACCCCAGAGACTCACGGC ACAG
	INTRON 3 - 4	51,725,543	51,734,506			8,964	GTAAATCATTTCGTGTATGATTTCT..........GTCTCGTCCTTTCCTTCTTTTGCAG
4	EXON 4	51,725,224	51,725,542	-	1	319	GTCAGACGGGAACACCGGCAGCCTTGGCATGACGTCGTGAAGGTGGCCATTGCTAACCTG ACATGTGGGGACTCAGGAACCCCACCCCTTATGGGCTCCAGTCTGTGCTGCTGGCCCCAG CTCTGGGGCTCTAAGAGGTCCTTGCTGCTACCCCACAGCAGCCTGCTGCCATCCATGTGT GCCTGTTGCTGAAGGCCTCGGTGGCCCCTGCCCATGAGGATGTGTGCCCCCGTTAGGGGG CTGTTCTTGGCCCTGGTGGTAGTGTTGAGGACCGCGGTGGCATTTGCACCTGTGCCTCGG CTCACCTGGGAACATGGAG
	INTRON 4 - 5	51,723,689	51,725,223			1,535	GTAAGTGAGTGTGAGCCATGAGTGA..........TTCCTTCCCCCCTCTGCTGCCACAG
5	EXON 5	51,723,543	51,723,688	1	0	146	AGGTAGGTCTGGTGCAGTTTCACAAGCCAGGCATCTTTAACTACTCGGCCTTGCTGATGA GTGAGGACAAAGACACTCTGTATGTGGGCGCCCGAGAAGCAGTCTTTGCAGTGAATGCGC TGAACATCTCTGAGAAGCAACATGAG
	INTRON 5 - 6	51,722,381	51,723,542			1,162	GTAGGTTCCATGGCCTCCCAGCCAT..........GCTCTGACACGTTCCTCCCTCACAG
6	EXON 6	51,722,318	51,722,380	0	0	63	GTATATTGGAAGGTCTCTGAAGACAAAAAATCCAAGTGTGCAGAGAAGGGGAAATCAAAG CAG
	INTRON 6 - 7	51,720,605	51,722,317			1,713	GTAATTGACCGCAAGTACAAAGAGC..........TGTTAATGGGGTGTTTCCCTTGCAG
7	EXON 7	51,720,506	51,720,604	0	0	99	ACGGAATGCCTAAACTACATTCGAGTACTACAGCCACTAAGCAGCACTTCCCTCTATGTG TGTGGGACCAATGCGTTCCAGCCCACCTGTGACCACCTG
	INTRON 7 - 8	51,714,888	51,720,505			5,618	GTAAGACCACAACATATCCCTGTGT..........ATGTTTTCTATTTATTCCATTGTAG
8	EXON 8	51,714,794	51,714,887	0	1	94	AACTTGACATCCTTCAAGTTTCTGGGGAAAAGTGAAGATGGCAAAGGAAGATGCCCCTTC GACCCCGCCCACAGCTACACATCAGTCATGGTTG
	INTRON 8 - 9	51,713,806	51,714,793			988	GTGAGTCCTGCGTCTGAGGCTCTTT..........CTCTACTCCCTCTCCTCCACCACAG
9	EXON 9	51,713,692	51,713,805	1	1	114	GGGGTGAGCTCTACTCTGGGACGTCCTATAATTTCTTGGGTAGTGAACCCATCATCTCTC GAAACTCTTCCCACAGTCCCTTGAGGACGGAGTATGCCATCCCGTGGCTGAACG
	INTRON 9 - 10	51,712,831	51,713,691			861	GTAAGTGTGTGCTGCCAGCCTTGTG..........ACCACCCTGTGATGCCACCCCACAG
10	EXON 10	51,712,679	51,712,830	1	0	152	AGCCTAGCTTCGTCTTTGCTGACGTGATCCAGAAAAGCCCAGATGGTCCGGAGGGTGAAG ATGACAAGGTCTACTTCTTTTTTACGGAGGTATCCGTGGAGTACGAATTCGTCTTCAAGT TGATGATCCCGCGAGTTGCCAGGGTGTGCAAG
	INTRON 10 - 11	51,711,625	51,712,678			1,054	GTGGGTGCTGTCTCCCTGTTCCCAC..........CCATGTGCTGTCTCTGGAATTCCAG
11	EXON 11	51,711,449	51,711,624	0	2	176	GGCGACCAGGGCGGCCTGCGGACTTTGCAAAAAAAGTGGACCTCCTTCCTAAAGGCCAGG CTGATCTGCTCCAAGCCAGACAGTGGCCTGGTCTTCAACATACTTCAGGATGTGTTTGTG CTGAGGGCCCCGGGCCTCAAGGAGCCTGTGTTCTATGCGGTCTTCACCCCACAGCT
	INTRON 11 - 12	51,711,357	51,711,448			92	GTGAGTTCACTTGTGAGTCCCTTGG..........CACTCTCACGGATTCCCCTCCACAG
12	EXON 12	51,711,200	51,711,356	2	0	157	GAACAATGTGGGTCTGTCAGCGGTGTGCGCCTACACACTGGCCACGGTGGAGGCAGTCTT CTCCCGTGGAAAGTACATGCAGAGTGCCACAGTGGAGCAGTCTCACACCAAGTGGGTGCG CTACAATGGCCCAGTGCCCACTCCCCGACCTGGAGCG
	INTRON 12 - 13	51,710,135	51,711,199			1,065	GTAAGCAGGGTCTCGAGCTCTGGGG..........TGACCGCGGTGCTTTTACCCCACAG
13	EXON 13	51,709,912	51,710,134	0	1	223	TGTATCGACAATGAGGCCCGGGCAGCCAACTACACCAGCTCCTTGAATCTCCCAGACAAA ACACTGCAGTTTGTAAAAGACCACCCTTTGATGGATGACTCAGTGACCCCGATAGACAAC AGACCCAAGCTGATCAAAAAAGATGTAAACTACACCCAGATAGTGGTAGACAGGACCCAG GCCCTGGATGGGACTTTCTACGACGTCATGTTCATCAGCACAG
	INTRON 13 - 14	51,708,991	51,709,911			921	GTGGGTTCCTTGGTAAGATTGGGAA..........GCTCACCTGTGTTCTGACCTTGCAG
14	EXON 14	51,708,875	51,708,990	1	0	116	ACCGGGGAGCTCTGCATAAAGCCGTCATCCTCACAAAAGAGGTGCATGTCATCGAGGAGA CCCAACTCTTCCGGGACTCTGAACCGGTCCTAACTCTGCTGCTATCGTCAAAGAAG
	INTRON 14 - 15	51,705,246	51,708,874			3,629	GTAATGTGGGTTTGGTTGGTTGGTT..........CTTGCCATCCGTCTCTCATACACAG
15	EXON 15	51,705,073	51,705,245	0	2	173	GGGAGGAAGTTTGTCTATGCAGGCTCCAACTCTGGAGTGGTCCAAGCGCCCCTGGCATTC TGCGAAAAGCACGGTAGCTGTGAAGACTGTGTGTTAGCACGGGACCCCTACTGTGCCTGG AGCCCAGCCATCAAGGCCTGTGTTACCCTGCACCAGGAAGAGGCCTCCAGCAG
	INTRON 15 - 16	51,704,997	51,705,072			76	GTATGCCTAAGGATGGGGCTGTGTG..........GTAATGTGCGCCTGTTGTCTTCTAG
16	EXON 16	51,704,953	51,704,996	2	1	44	GGGCTGGATTCAGGACATGAGCGGCGACACATCCTCATGCCTGG
	INTRON 16 - 17	51,703,532	51,704,952			1,421	GTGAGTGGATCTCCTTTGCTTCCCA..........GAGCACGTTTATTTTGATGTTCCAG
17	EXON 17	51,701,246	51,703,531	1	-	2,286	ATAAGAGTAAAGAAAGTTTCAACCAGCATTTTTTCAAGCACGGCGGCACAGCGGAACTCA AATGTTTCCAAAAGTCCAACCTAGCCCGGGTGGTATGGAAGTTCCAGAATGGCGAGTTGA AGGCCGCAAGTCCCAAGTACGGCTTTGTGGGCAGGAAGCACCTGCTCATCTTCAACCTGT CGGACGGAGATAGCGGCGTGTACCAGTGCCTGTCAGAGGAAAGGGTGAGGAATAAAACGG TCTCCCAGCTGCTGGCCAAGCACGTTCTGGAAGTGAAGATGGTACCTCGGACCCCCCCCT CACCTACCTCAGAGGATGCTCAGACAGAAGGTAGTAAGATCACATCCAAAATGCCGGTTG CATCTACCCAGGGGTCCTCTCCCCCTACCCCGGCTCTGTGGGCAACCTCCCCCAGAGCCG CCACCCTACCTCCCAAGTCCTCCTCCGGCACATCCTGTGAACCAAAGATGGTCATCAACA CGGTCCCCCAGCTCCACTCAGAGAAGACGGTATATCTCAAGTCCAGTGACAACCGCCTGC TCATGTCTCTCCTCCTCTTCATCTTTGTCCTCTTCCTCTGCCTCTTTTCCTACAACTGCT ACAAGGGCTACCTGCCCGGACAGTGCTTAAAATTCCGCTCAGCCCTGCTGCTTGGAAAGA AAACACCCAAGTCAGACTTCTCTGACCTGGAGCAGAGTGTGAAGGAGACACTGGTCGAGC CTGGGAGCTTCTCCCAGCAGAACGGCGACCACCCCAAGCCAGCCCTGGATACGGGCTATG AAACGGAGCAAGACACCATCACCAGCAAAGTCCCCACGGATCGTGAGGACTCGCAACGGA TCGATGAACTCTCTGCCCGGGACAAACCGTTTGATGTCAAGTGTGAACTGAAGTTTGCAG ATTCGGATGCTGACGGGGACTGAGGCCAGCGTGTCCCAGCCCATGCCCCTCTGTCTTCGT GGAGAGTGTTGTGTTGAGCCCATTCAGTAGCCGAGTCTTGTCACTCTGTGCCAGCCTCAG TCCTGTGTCCCTTTTTCTCTTGGGTTGAGCCTGTGGCTCATCCCCTTTGTCCTTTTGGGA AGCAAGTATCTATTCCAGTCTCAAGTCCTGCAGTTGCTGGAGCGCTTACGCACCTGAGCC CTTTGTGTCCTGGGGGAGAGATGGCCACCTCCGTGGGCTGCGAAGAGCCACCCCTTCCTC TTCCGATTCTCCTAGCAGCCACTCAGAGATAATTTAATTCCAGATTGGAAACGCCCTTTT AGTTTATCAGATTGGTAACTTACATCCTGCTGCCCAGATGGCACGGACAGTTTTCTTTCA CTTAATTTTTTTTTTTTTTTTAAGGATTTTCGCTCCTATTGTGTTGATGTCTTAGGTCAT TTTCTTTTTTTCTTTCTCTTTTTTTATTACCAGAGGAGATGTTTTAATATTCATGAGAAG AGGAACATTTTCTAGATTTTTTTGTTGTTATATATTGAGATATAAAATATGGCTATGTTG CTTAAGATTCTCAGGGATAGACTTATTTTTGTTAACTTCATTCTTTCCTGCTGTTAGGAA CATAGGCCTAAAATTGTCTCTTGAGTTTGCTCACCCTTTTGTTTTGGTAGGGTTTTTTTG TTGTTGCTGTTATTGTTTCTAGTTTGTAATCTTATTCATTTTGAAGGATTTTTCTTTCTG AACTTTTTAAATTTTTATATTTTCCTGCCATACATCTACAAAGTGGGTTTTGAGTGAGGG CAGGTGGCCCAGTGGCTTCCGGTGGCGACTGAGCTGGTCCCACGAGGGGAGGAGGGTTTA TATACCCCATGACCCTGCTGCTTCTTGGCGCCTCCTGCCCATGAGGATCACATCCTGTCT CTCCTTGCTTCCATCTCTCATCACTGCCCTTGGACTTCCGCCTTGACTGTCCACGAAAGA CAGAAATGGGTTGGGTAGTTGGGCTCCCAACCTCGGATGGTGACCGCAACATCCCGTGTG GGCGGCCGGCCGCTCCTGCAGCCCGACTCTCCTGCCAGTGTCTTTCAGGATGTCAACGGG TGGTACGATTCTGGCATTTGTTTCTCGCTCACCGTGTGTGGAACACTCATTCCATGTAGA GGGTGACGAACTCTGGATATCCCCCCACCCCCACCCCGTGCCGTGTAGACACTCATCTTC TGCATGACATGATCTACCATTCGGTGTAAACATTTGTGTTTATAAGATTTACTTTGTTTT TATTTTTCTACTTGGAACTGTACACATTTGAAAAGTACCCAAATAAACCAGAAGCTTTAT CGTTGA
	3' upstream sequence						CTGGGCCAGCCTTTGCCTTAGTGTGGAGGCTGGGGGCGGTGGGGTGTCCTCCTGTCCCTC TGTGACGGCCCTGGGTGGGGGTTGGTCCTGGGATCTTGTCTGTTCTCATCCCATGTGTCC GGTTTCTTGCTTTACCTTCTCCGTCATGGGAATGGTTCTGACGACTTCTTCCTCAGTGCC TTCTTTTGTGTCCTCTGTCTCACAGCCTCATCTCCTAAGTCCTTCCCTCCTCCTGGCTCC TCTCTATCCTGTCTGGGCCCTGACTCATCTTCTCCCAGAAGCCCTCGGCCGGCCTTGGCC TCGGGGCCCAACAGCCGTAAGCAGGTCACCTTACTGCCACCCTTCTTGAGTGACCAGGCG CAGAAGGTGCAGGCGCTGGGGACCTTCTACCTCTTCTGCCAGGCCACAGGTGAGTTGAGG GGCCTGAGTGTCCATGGCTGTCCCCTCGCTCTGCCCTTGCTCCTAGCTGTGCCTGAGGTT CAGCTGTCTGTGCTGATCCCGGGATCAACTGTCAACCGTGCAACGCTGTTGCTAGGGCTG CCGCAGGGGTCATCCATCATCTCGCCGTAAAGGTACAGGTGTTGGGTCTTCTGAGCATGT AGGCTGCTGTGCCCAATGTTGTATGTCAGAAAACTGGACCTACAGGGCAGCAGAGAACCA GATGAGGCCACGGTTTGCTAACCTGGGTTAGGTAGGGAATTCAAGGCCAACCCCGGGCAA CTTATGAGAACCCTGTCTTGGAGTTTTAAAATAAGAATCAGGATACATCCAGTGGTTGAA TGTGTGACTAATGTGTACAAGGTCCCAGCCACAGCATAAATAAATACATAAATGCGTGAA GTCCATAAGGTGGAGGTTTTCTCCCTCTGCTGGAGACTATCACATAAGGACATGGACTCT TGAAAGATGGTAGTTTACCCAAACCATTCTTTAGCTCAGAGATACCCATAGCCCCATCTT TCCCTGTGGGCTTTGGCCTCTGCACAGAAGTGAGGAATAG..........

Sequence Detail Report

Gene Symbol (Gene ID)	Sema4d (ENSMUSG00000021451)
Transcript ID	ENSMUST00000110040

		SNP Information
Strain :
Sequence Retrieve :
Exon translate : CDS Start ( 1 ) - End ( 862 ) -
Strand :	forward reverse
Show sequence :	nucleotide amino acid
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