MoG+ -Mouse Genome database with high added value-

Target CDS Information

Gene Symbol (Gene ID)

Smarca2 (ENSMUSG00000024921)

Cross Reference

CCDS	CCDS37945.1
EMBL	AC118249, AC118472, AK011935
Fantom	2610209L14
GO	GO:0000790, GO:0001105, GO:0005515, ...show all
goslim_goa	GO:0000228, GO:0000988, GO:0003674, ...show all
MGI_trans_name	Smarca2-007
OTTP	OTTMUSP00000058200
OTTT	OTTMUST00000104066
protein_id	BAB27925.1
RefSeq_mRNA	NM_026003.2

RefSeq_mRNA_predicted	XM_006527290, XM_006527291
RefSeq_peptide	NP_080279
RefSeq_peptide_predicted	XP_006527354.1
UCSC	uc008hbr.1
UniParc	UPI00000224A2
Uniprot/SPTREMBL	Q9D007
Vega_transcript	OTTMUST00000104066, Smarca2-007
Vega_translation	222486, OTTMUSP00000058200

Definition

protein_id:ENSMUSP00000108256
translation:

MEEEVRLKKRKRRRNVDKDPVKEDVEKAKKRRGRPPAEKLSPNPPKLTKQMNAIIDTVIN
YKDSSGRQLSEVFIQLPSRKDLPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLL
CHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEEESNEEEEEDDEEESESEAKS
VKVKIKLNKKEEKGRDTGKGKKRPNRGKAKPVVSDFDSDEEQEENEQSEASGTDNE

Chromosome

Length
Position(start - end)

25,518
26,751,851 - 26,777,370

Orient to Chromosome

plus

Link

Location : (19:26751851-26777370)
/

Detail Map

name	Smarca2 (ENSMUSG00000024921)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : Smarca2 note : SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 [Source:MGI Symbol;Acc:MGI:99603]

name	4931403E22Rik (ENSMUSG00000093772)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : 4931403E22Rik note : RIKEN cDNA 4931403E22 gene [Source:MGI Symbol;Acc:MGI:1918192]

name	Smarca2 (ENSMUSG00000024921)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000025862

name	Smarca2 (ENSMUSG00000024921)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000176030

name	Smarca2 (ENSMUSG00000024921)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000099537

name	Smarca2 (ENSMUSG00000024921)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000176769

name	Smarca2 (ENSMUSG00000024921)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000175791

name	Smarca2 (ENSMUSG00000024921)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000176698

name	Smarca2 (ENSMUSG00000024921)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000177252

name	Smarca2 (ENSMUSG00000024921)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000176475

name	Smarca2 (ENSMUSG00000024921)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000112637

name	Smarca2 (ENSMUSG00000024921)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000175842

name	Smarca2 (ENSMUSG00000024921)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000175953

name	Smarca2 (ENSMUSG00000024921)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000176731

name	Smarca2 (ENSMUSG00000024921)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000177116

name	Smarca2 (ENSMUSG00000024921)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000177484

name	Smarca2 (ENSMUSG00000024921) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS29720.1 RefSeq_peptide:NP_035546 RefSeq_mRNA:NM_011416.2 RefSeq_mRNA_predicted:XM_006527285 RefSeq_peptide_predicted:XP_006527348.1 Vega_transcript:OTTMUST00000104062 Vega_transcript:Smarca2-001 Uniprot/SPTREMBL:F2Z4A9 UCSC:uc008hbn.1 EMBL:AC118249 EMBL:AC118472 GO:GO:0000790 GO:GO:0000790 GO:GO:0001105 GO:GO:0001105 GO:GO:0003682 GO:GO:0005515 GO:GO:0005524 GO:GO:0005634 GO:GO:0005654 GO:GO:0005654 GO:GO:0006325 GO:GO:0006334 GO:GO:0006338 GO:GO:0007286 GO:GO:0008152 GO:GO:0008285 GO:GO:0008285 GO:GO:0016514 GO:GO:0016514 GO:GO:0016887 GO:GO:0030308 GO:GO:0030308 GO:GO:0035887 GO:GO:0042393 GO:GO:0043231 GO:GO:0043231 GO:GO:0044212 GO:GO:0044212 GO:GO:0045111 GO:GO:0045111 GO:GO:0045892 GO:GO:0045892 GO:GO:0045893 GO:GO:0045893 GO:GO:0045944 GO:GO:0045944 GO:GO:0071564 GO:GO:0071565 GO:GO:0090544 MGI_trans_name:Smarca2-001 Vega_translation:222477 Vega_translation:OTTMUSP00000058197 goslim_goa:GO:0000228 goslim_goa:GO:0000988 goslim_goa:GO:0003674 goslim_goa:GO:0003677 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0005694 goslim_goa:GO:0005856 goslim_goa:GO:0006461 goslim_goa:GO:0008150 goslim_goa:GO:0016887 goslim_goa:GO:0022607 goslim_goa:GO:0030154 goslim_goa:GO:0042393 goslim_goa:GO:0043167 goslim_goa:GO:0043226 goslim_goa:GO:0043234 goslim_goa:GO:0048856 goslim_goa:GO:0051276 goslim_goa:GO:0065003 OTTP:OTTMUSP00000058197 OTTT:OTTMUST00000104062 UniParc:UPI000042B0CA
definition	note : transcript_id=ENSMUST00000025862 protein_id : ENSMUSP00000025862 translation : MSTPTDPAAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVSHPLSTMGSADFPQEGMHQLHKPMDGIHDKGIVEDVHCGSMKGTSMRPPHPGMGPPQSPMDQHSQGYMSPHPSPLGAPEHVSSPISGGGPTPPQMPPSQPGALIPGDPQAMNQPNRGPSPFSPVQLHQLRAQILAYKMLARGQPLPETLQLAVQGKRTLPGMQQQQQQQQQQQQQQQQQQQQQQQQQQPQQPQQQAQAQPQQQQQQQQQPALVSYNRPSGPGQELLLSGQSAPQKLSAPAPSGRPSPAPQAAVQPTATAVPGPSVQQPAPGQPSPVLQLQQKQSRISPIQKPQGLDPVEILQEREYRLQARIAHRIQELESLPGSLPPDLRTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLREARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHANTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVWEHKQAQAAKEKKKRRRRKKKAEENAEGGEPALGPDGEPIDESSQMSDLPVKVTHTETGKVLFGPEAPKASQLDAWLEMNPGYEVAPRSDSEESESDYEEEDEEEESSRQETEEKILLDPNSEEVSEKDAKQIIETAKQDVDDEYSMQYSARGSQSYYTVAHAISERVEKQSALLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMDRRREDARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQWLRAIEDGNLEEMEEEVRLKKRKRRRNVDKDPVKEDVEKAKKRRGRPPAEKLSPNPPKLTKQMNAIIDTVINYKDSSGRQLSEVFIQLPSRKDLPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEEESNEEEEEDDEEESESEAKSVKVKIKLNKKEEKGRDTGKGKKRPNRGKAKPVVSDFDSDEEQEENEQSEASGTDNE

name	Smarca2 (ENSMUSG00000024921) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	RefSeq_mRNA_predicted:XM_006527281.2 RefSeq_mRNA_predicted:XM_006527282.2 RefSeq_mRNA_predicted:XM_006527283.2 RefSeq_mRNA_predicted:XM_006527284.2 RefSeq_mRNA_predicted:XM_006527286.1 RefSeq_peptide_predicted:XP_006527344.1 RefSeq_peptide_predicted:XP_006527345.1 RefSeq_peptide_predicted:XP_006527346.1 RefSeq_peptide_predicted:XP_006527347.1 RefSeq_peptide_predicted:XP_006527349.1 Vega_transcript:OTTMUST00000104061 Vega_transcript:Smarca2-003 Uniprot/SPTREMBL:H3BLH0 UCSC:uc008hbn.1 EMBL:AC118249 EMBL:AC118472 GO:GO:0000790 GO:GO:0001105 GO:GO:0005515 GO:GO:0005524 GO:GO:0005634 GO:GO:0005654 GO:GO:0006325 GO:GO:0006334 GO:GO:0006338 GO:GO:0008152 GO:GO:0008285 GO:GO:0016514 GO:GO:0016887 GO:GO:0030308 GO:GO:0035887 GO:GO:0042393 GO:GO:0043231 GO:GO:0044212 GO:GO:0045111 GO:GO:0045892 GO:GO:0045893 GO:GO:0045944 GO:GO:0071564 GO:GO:0071565 GO:GO:0090544 MGI_trans_name:Smarca2-003 Vega_translation:222478 Vega_translation:OTTMUSP00000058196 goslim_goa:GO:0000228 goslim_goa:GO:0000988 goslim_goa:GO:0003674 goslim_goa:GO:0003677 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0005694 goslim_goa:GO:0005856 goslim_goa:GO:0006461 goslim_goa:GO:0008150 goslim_goa:GO:0016887 goslim_goa:GO:0022607 goslim_goa:GO:0030154 goslim_goa:GO:0042393 goslim_goa:GO:0043167 goslim_goa:GO:0043226 goslim_goa:GO:0043234 goslim_goa:GO:0048856 goslim_goa:GO:0051276 goslim_goa:GO:0065003 OTTP:OTTMUSP00000058196 OTTT:OTTMUST00000104061 UniParc:UPI00024675E9
definition	note : transcript_id=ENSMUST00000176030 protein_id : ENSMUSP00000135784 translation : MSTPTDPAAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVSHPLSTMGSADFPQEGMHQLHKPMDGIHDKGIVEDVHCGSMKGTSMRPPHPGMGPPQSPMDQHSQGYMSPHPSPLGAPEHVSSPISGGGPTPPQMPPSQPGALIPGDPQAMNQPNRGPSPFSPVQLHQLRAQILAYKMLARGQPLPETLQLAVQGKRTLPGMQQQQQQQQQQQQQQQQQQQQQQQQQQPQQPQQQAQAQPQQQQQQQQQPALVSYNRPSGPGQELLLSGQSAPQKLSAPAPSGRPSPAPQAAVQPTATAVPGPSVQQPAPGQPSPVLQLQQKQSRISPIQKPQGLDPVEILQEREYRLQARIAHRIQELESLPGSLPPDLRTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLREARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHANTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVWEHKQAQAAKEKKKRRRRKKKAEENAEGGEPALGPDGEPIDESSQMSDLPVKVTHTETGKVLFGPEAPKASQLDAWLEMNPGYEVAPRSDSEESESDYEEEDEEEESSRQETEEKILLDPNSEEVSEKDAKQIIETAKQDVDDEYSMQYSARGSQSYYTVAHAISERVEKQSALLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMDRRREDARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQWLRAIEDGNLEEMEEEVRLKKRKRRRNVDKDPVKEDVEKAKKRRGRPPAEKLSPNPPKLTKQMNAIIDTVINYKDRCNVEKVPCNSQLEIEGNSSGRQLSEVFIQLPSRKDLPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEEESNEEEEEDDEEESESEAKSVKVKIKLNKKEEKGRDTGKGKKRPNRGKAKPVVSDFDSDEEQEENEQSEASGTDNE

name	Smarca2 (ENSMUSG00000024921) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000104063 Vega_transcript:Smarca2-002 Uniprot/SPTREMBL:E9QAB8 UCSC:uc008hbn.1 EMBL:AC118249 EMBL:AC118472 GO:GO:0000790 GO:GO:0001105 GO:GO:0005515 GO:GO:0005524 GO:GO:0005634 GO:GO:0005654 GO:GO:0006325 GO:GO:0006334 GO:GO:0006338 GO:GO:0008152 GO:GO:0008285 GO:GO:0016514 GO:GO:0016887 GO:GO:0030308 GO:GO:0035887 GO:GO:0042393 GO:GO:0043231 GO:GO:0044212 GO:GO:0045111 GO:GO:0045892 GO:GO:0045893 GO:GO:0045944 GO:GO:0071564 GO:GO:0071565 GO:GO:0090544 MGI_trans_name:Smarca2-002 Vega_translation:222479 Vega_translation:OTTMUSP00000058198 goslim_goa:GO:0000228 goslim_goa:GO:0000988 goslim_goa:GO:0003674 goslim_goa:GO:0003677 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0005694 goslim_goa:GO:0005856 goslim_goa:GO:0006461 goslim_goa:GO:0008150 goslim_goa:GO:0016887 goslim_goa:GO:0022607 goslim_goa:GO:0030154 goslim_goa:GO:0042393 goslim_goa:GO:0043167 goslim_goa:GO:0043226 goslim_goa:GO:0043234 goslim_goa:GO:0048856 goslim_goa:GO:0051276 goslim_goa:GO:0065003 OTTP:OTTMUSP00000058198 OTTT:OTTMUST00000104063 UniParc:UPI0000D8ACEB
definition	note : transcript_id=ENSMUST00000099537 protein_id : ENSMUSP00000097135 translation : MSTPTDPAAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVSHPLSTMGSADFPQEGMHQLHKPMDGIHDKGIVEDVHCGSMKGTSMRPPHPGMGPPQSPMDQHSQGYMSPHPSPLGAPEHVSSPISGGGPTPPQMPPSQPGALIPGDPQAMNQPNRGPSPFSPVQLHQLRAQILAYKMLARGQPLPETLQLAVQGKRTLPGMQQQQQQQQQQQQQQQQQQQQQQQQQQPQQPQQQAQAQPQQQQQQQQQPALVSYNRPSGPGQELLLSGQSAPQKLSAPAPSGRPSPAPQAAVQPTATAVPGPSVQQPAPGQPSPVLQLQQKQSRISPIQKPQGLDPVEILQEREYRLQARIAHRIQELESLPGSLPPDLRTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLREARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHANTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVWEHKQAQAAKEKKKRRRRKKKAEENAEGGEPALGPDGEPIDESSQMSDLPVKVTHTETGKVLFGPEAPKASQLDAWLEMNPGYEVAPRSDSEESESDYEEEDEEEESSRQETEEKILLDPNSEEVSEKDAKQIIETAKQDVDDEYSMQYSARGSQSYYTVAHAISERVEKQSALLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMDRRREDARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQWLRAIEDGNLEEMEEEVRLKKRKRRRNVDKDPVKEDVEKAKKRRGRPPAEKLSPNPPKLTKQMNAIIDTVINYKDRCNVEKVPCNSQLEIEGNRSESVIISIGAWETWRKTSCFSVTTHRHSTWKDPRSTKTPLSYSQCLRVLGRKLPKKKRVRKKAMKKRKKMMKRSRSQRRNL

name	Smarca2 (ENSMUSG00000024921) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000104064 Vega_transcript:Smarca2-005 Uniprot/SPTREMBL:H3BJK2 UCSC:uc008hbn.1 EMBL:AC118249 EMBL:AC118472 GO:GO:0000790 GO:GO:0001105 GO:GO:0005515 GO:GO:0005524 GO:GO:0005634 GO:GO:0005654 GO:GO:0006325 GO:GO:0006334 GO:GO:0006338 GO:GO:0008152 GO:GO:0008285 GO:GO:0016514 GO:GO:0016887 GO:GO:0030308 GO:GO:0035887 GO:GO:0042393 GO:GO:0043231 GO:GO:0044212 GO:GO:0045111 GO:GO:0045892 GO:GO:0045893 GO:GO:0045944 GO:GO:0071564 GO:GO:0071565 GO:GO:0090544 MGI_trans_name:Smarca2-005 Vega_translation:222480 Vega_translation:OTTMUSP00000058199 goslim_goa:GO:0000228 goslim_goa:GO:0000988 goslim_goa:GO:0003674 goslim_goa:GO:0003677 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0005694 goslim_goa:GO:0005856 goslim_goa:GO:0006461 goslim_goa:GO:0008150 goslim_goa:GO:0016887 goslim_goa:GO:0022607 goslim_goa:GO:0030154 goslim_goa:GO:0042393 goslim_goa:GO:0043167 goslim_goa:GO:0043226 goslim_goa:GO:0043234 goslim_goa:GO:0048856 goslim_goa:GO:0051276 goslim_goa:GO:0065003 OTTP:OTTMUSP00000058199 OTTT:OTTMUST00000104064 UniParc:UPI00024675EB
definition	note : transcript_id=ENSMUST00000176769 protein_id : ENSMUSP00000135017 translation : MSTPTDPAAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVSHPLSTMGSADFPQEGMHQLHKPMDGIHDKGIVEDVHCGSMKGTSMRPPHPGMGPPQSPMDQHSQGYMSPHPSPLGAPEHVSSPISGGGPTPPQMPPSQPGALIPGDPQAMNQPNRGPSPFSPVQLHQLRAQILAYKMLARGQPLPETLQLAVQGKRTLPGMQQQQQQQQQQQQQQQQQQQQQQQQQQPQQPQQQAQAQPQQQQQQQQQPALVSYNRPSGPGQELLLSGQSAPQKLSAPAPSGRPSPAPQAAVQPTATAVPGPSVQQPAPGQPSPVLQLQQKQSRISPIQKPQGLDPVEILQEREYRLQARIAHRIQELESLPGSLPPDLRTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLREARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHANTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVWEHKQAQAAKEKKKRRRRKKKAEENAEGGEPALGPDGEPIDESSQMSDLPVKVTHTETGKVLFGPEAPKASQLDAWLEMNPGYEVAPRSDSEESESDYEEEDEEEESSRQETEEKILLDPNSEEVSEKDAKQIIETAKQDVDDEYSMQYSARGSQSYYTVAHAISERVEKQSALLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMDRRREDARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQWLRAIEDGNLEEMEEEVRLKKRKRRRNVDKDPVKEDVEKAKKRRGRPPAEKLSPNPPKLTKQMNAIIDTVINYKDSSGRQLSEVFIQLPSRKDLPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEEESNEEEEEDDEEESESEAKSVKVKIKLNKKEEKGRDTGKGKKRPNRGKAKPVVSDFDSDEEQEENEQSEASGTDNE

name	Smarca2 (ENSMUSG00000024921) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000104079 Vega_transcript:Smarca2-010 Uniprot/SPTREMBL:H3BKJ3 UCSC:uc008hbr.1 EMBL:AC118249 EMBL:AC118472 GO:GO:0000790 GO:GO:0001105 GO:GO:0005515 GO:GO:0005634 GO:GO:0005654 GO:GO:0006325 GO:GO:0006334 GO:GO:0006338 GO:GO:0008152 GO:GO:0008285 GO:GO:0016514 GO:GO:0016887 GO:GO:0030308 GO:GO:0035887 GO:GO:0043231 GO:GO:0044212 GO:GO:0045111 GO:GO:0045892 GO:GO:0045893 GO:GO:0045944 GO:GO:0071564 GO:GO:0071565 GO:GO:0090544 MGI_trans_name:Smarca2-010 Vega_translation:222482 Vega_translation:OTTMUSP00000058207 goslim_goa:GO:0000228 goslim_goa:GO:0000988 goslim_goa:GO:0003674 goslim_goa:GO:0003677 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0005694 goslim_goa:GO:0005856 goslim_goa:GO:0006461 goslim_goa:GO:0008150 goslim_goa:GO:0016887 goslim_goa:GO:0022607 goslim_goa:GO:0030154 goslim_goa:GO:0043226 goslim_goa:GO:0043234 goslim_goa:GO:0048856 goslim_goa:GO:0051276 goslim_goa:GO:0065003 OTTP:OTTMUSP00000058207 OTTT:OTTMUST00000104079 UniParc:UPI00024675ED
definition	note : transcript_id=ENSMUST00000175791 protein_id : ENSMUSP00000135412 translation : MEEEVRLKKRKRRRNVDKDPVKEDVEKAKKRRGRPPAEKLSPNPPKLTKQMNAIIDTVINYKDRCNVEKVPCNSQLEIEGNSSGRQLSEVFIQLPSRKDLPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEEESNEEEEEDDEEESESEAKSVKVKIKLNKKEEKGRDTGKGKKRPNRGKAKPVVSDFDSDEEQEENEQSEASGTDNE

name	Smarca2 (ENSMUSG00000024921) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000104073 Vega_transcript:Smarca2-011 Uniprot/SPTREMBL:H3BKJ3 UCSC:uc008hbr.1 EMBL:AC118249 EMBL:AC118472 GO:GO:0000790 GO:GO:0001105 GO:GO:0005515 GO:GO:0005634 GO:GO:0005654 GO:GO:0006325 GO:GO:0006334 GO:GO:0006338 GO:GO:0008152 GO:GO:0008285 GO:GO:0016514 GO:GO:0016887 GO:GO:0030308 GO:GO:0035887 GO:GO:0043231 GO:GO:0044212 GO:GO:0045111 GO:GO:0045892 GO:GO:0045893 GO:GO:0045944 GO:GO:0071564 GO:GO:0071565 GO:GO:0090544 MGI_trans_name:Smarca2-011 Vega_translation:222483 Vega_translation:OTTMUSP00000058204 goslim_goa:GO:0000228 goslim_goa:GO:0000988 goslim_goa:GO:0003674 goslim_goa:GO:0003677 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0005694 goslim_goa:GO:0005856 goslim_goa:GO:0006461 goslim_goa:GO:0008150 goslim_goa:GO:0016887 goslim_goa:GO:0022607 goslim_goa:GO:0030154 goslim_goa:GO:0043226 goslim_goa:GO:0043234 goslim_goa:GO:0048856 goslim_goa:GO:0051276 goslim_goa:GO:0065003 OTTP:OTTMUSP00000058204 OTTT:OTTMUST00000104073 UniParc:UPI00024675ED
definition	note : transcript_id=ENSMUST00000176698 protein_id : ENSMUSP00000134914 translation : MEEEVRLKKRKRRRNVDKDPVKEDVEKAKKRRGRPPAEKLSPNPPKLTKQMNAIIDTVINYKDRCNVEKVPCNSQLEIEGNSSGRQLSEVFIQLPSRKDLPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEEESNEEEEEDDEEESESEAKSVKVKIKLNKKEEKGRDTGKGKKRPNRGKAKPVVSDFDSDEEQEENEQSEASGTDNE

name	Smarca2 (ENSMUSG00000024921) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000104080 Vega_transcript:Smarca2-016 Uniprot/SPTREMBL:H3BJI1 UCSC:uc008hbr.1 EMBL:AC118249 EMBL:AC118472 GO:GO:0000790 GO:GO:0001105 GO:GO:0005515 GO:GO:0005634 GO:GO:0005654 GO:GO:0006325 GO:GO:0006334 GO:GO:0006338 GO:GO:0008152 GO:GO:0008285 GO:GO:0016514 GO:GO:0016887 GO:GO:0030308 GO:GO:0035887 GO:GO:0043231 GO:GO:0044212 GO:GO:0045111 GO:GO:0045892 GO:GO:0045893 GO:GO:0045944 GO:GO:0071564 GO:GO:0071565 GO:GO:0090544 MGI_trans_name:Smarca2-016 Vega_translation:222484 Vega_translation:OTTMUSP00000058208 goslim_goa:GO:0000228 goslim_goa:GO:0000988 goslim_goa:GO:0003674 goslim_goa:GO:0003677 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0005694 goslim_goa:GO:0005856 goslim_goa:GO:0006461 goslim_goa:GO:0008150 goslim_goa:GO:0016887 goslim_goa:GO:0022607 goslim_goa:GO:0030154 goslim_goa:GO:0043226 goslim_goa:GO:0043234 goslim_goa:GO:0048856 goslim_goa:GO:0051276 goslim_goa:GO:0065003 OTTP:OTTMUSP00000058208 OTTT:OTTMUST00000104080 UniParc:UPI00024675EE
definition	note : transcript_id=ENSMUST00000177252 protein_id : ENSMUSP00000134995 translation : MEEEVRLKKRKRRRNVDKDPVKEDVEKAKKRRGRPPAEKLSPNPPKLTKQMNAIIDTVINYKDSSGRQLSEVFIQLPSRKDLPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEEESNEEEEEDDEEESESEAKSVKVKIKLNKKEEKGRDTGKGKKRPNRGKAKPVVSDFDSDEEQEE

name	Smarca2 (ENSMUSG00000024921) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	RefSeq_peptide_predicted:XP_006527351.1 RefSeq_peptide_predicted:XP_006527352.1 Vega_transcript:OTTMUST00000104074 Vega_transcript:Smarca2-009 Uniprot/SPTREMBL:H3BK47 UCSC:uc008hbr.1 EMBL:AC118249 EMBL:AC118472 GO:GO:0000790 GO:GO:0001105 GO:GO:0005515 GO:GO:0005634 GO:GO:0005654 GO:GO:0006325 GO:GO:0006334 GO:GO:0006338 GO:GO:0008152 GO:GO:0008285 GO:GO:0016514 GO:GO:0016887 GO:GO:0030308 GO:GO:0035887 GO:GO:0043231 GO:GO:0044212 GO:GO:0045111 GO:GO:0045892 GO:GO:0045893 GO:GO:0045944 GO:GO:0071564 GO:GO:0071565 GO:GO:0090544 MGI_trans_name:Smarca2-009 Vega_translation:222485 Vega_translation:OTTMUSP00000058205 goslim_goa:GO:0000228 goslim_goa:GO:0000988 goslim_goa:GO:0003674 goslim_goa:GO:0003677 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0005694 goslim_goa:GO:0005856 goslim_goa:GO:0006461 goslim_goa:GO:0008150 goslim_goa:GO:0016887 goslim_goa:GO:0022607 goslim_goa:GO:0030154 goslim_goa:GO:0043226 goslim_goa:GO:0043234 goslim_goa:GO:0048856 goslim_goa:GO:0051276 goslim_goa:GO:0065003 OTTP:OTTMUSP00000058205 OTTT:OTTMUST00000104074 UniParc:UPI00001ECDC7
definition	note : transcript_id=ENSMUST00000176475 protein_id : ENSMUSP00000135248 translation : MKRLAARCFAGLLILSPLTVISDSRPADSGKAIEDGNLEEMEEEVRLKKRKRRRNVDKDPVKEDVEKAKKRRGRPPAEKLSPNPPKLTKQMNAIIDTVINYKDSSGRQLSEVFIQLPSRKDLPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEEESNEEEEEDDEEESESEAKSVKVKIKLNKKEEKGRDTGKGKKRPNRGKAKPVVSDFDSDEEQEENEQSEASGTDNE

name	Smarca2 (ENSMUSG00000024921) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS37945.1 RefSeq_peptide:NP_080279 RefSeq_mRNA:NM_026003.2 RefSeq_mRNA_predicted:XM_006527290 RefSeq_mRNA_predicted:XM_006527291 RefSeq_peptide_predicted:XP_006527354.1 Vega_transcript:OTTMUST00000104066 Vega_transcript:Smarca2-007 Uniprot/SPTREMBL:Q9D007 UCSC:uc008hbr.1 Fantom:2610209L14 EMBL:AC118249 EMBL:AC118472 EMBL:AK011935 GO:GO:0000790 GO:GO:0001105 GO:GO:0005515 GO:GO:0005634 GO:GO:0005654 GO:GO:0006325 GO:GO:0006334 GO:GO:0006338 GO:GO:0008152 GO:GO:0008285 GO:GO:0016514 GO:GO:0016887 GO:GO:0030308 GO:GO:0035887 GO:GO:0043231 GO:GO:0044212 GO:GO:0045111 GO:GO:0045892 GO:GO:0045893 GO:GO:0045944 GO:GO:0071564 GO:GO:0071565 GO:GO:0090544 MGI_trans_name:Smarca2-007 Vega_translation:222486 Vega_translation:OTTMUSP00000058200 goslim_goa:GO:0000228 goslim_goa:GO:0000988 goslim_goa:GO:0003674 goslim_goa:GO:0003677 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0005694 goslim_goa:GO:0005856 goslim_goa:GO:0006461 goslim_goa:GO:0008150 goslim_goa:GO:0016887 goslim_goa:GO:0022607 goslim_goa:GO:0030154 goslim_goa:GO:0043226 goslim_goa:GO:0043234 goslim_goa:GO:0048856 goslim_goa:GO:0051276 goslim_goa:GO:0065003 protein_id:BAB27925.1 OTTP:OTTMUSP00000058200 OTTT:OTTMUST00000104066 UniParc:UPI00000224A2
definition	note : transcript_id=ENSMUST00000112637 protein_id : ENSMUSP00000108256 translation : MEEEVRLKKRKRRRNVDKDPVKEDVEKAKKRRGRPPAEKLSPNPPKLTKQMNAIIDTVINYKDSSGRQLSEVFIQLPSRKDLPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEEESNEEEEEDDEEESESEAKSVKVKIKLNKKEEKGRDTGKGKKRPNRGKAKPVVSDFDSDEEQEENEQSEASGTDNE

name	Smarca2 (ENSMUSG00000024921) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000104081 Vega_transcript:Smarca2-015 Uniprot/SPTREMBL:H3BLI4 EMBL:AC118249 EMBL:AC118472 GO:GO:0000790 GO:GO:0001105 GO:GO:0005515 GO:GO:0005634 GO:GO:0005654 GO:GO:0006325 GO:GO:0006334 GO:GO:0006338 GO:GO:0008152 GO:GO:0008285 GO:GO:0016514 GO:GO:0016887 GO:GO:0030308 GO:GO:0035887 GO:GO:0043231 GO:GO:0044212 GO:GO:0045111 GO:GO:0045892 GO:GO:0045893 GO:GO:0045944 GO:GO:0071564 GO:GO:0071565 GO:GO:0090544 MGI_trans_name:Smarca2-015 Vega_translation:222487 Vega_translation:OTTMUSP00000058209 goslim_goa:GO:0000228 goslim_goa:GO:0000988 goslim_goa:GO:0003674 goslim_goa:GO:0003677 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0005694 goslim_goa:GO:0005856 goslim_goa:GO:0006461 goslim_goa:GO:0008150 goslim_goa:GO:0016887 goslim_goa:GO:0022607 goslim_goa:GO:0030154 goslim_goa:GO:0043226 goslim_goa:GO:0043234 goslim_goa:GO:0048856 goslim_goa:GO:0051276 goslim_goa:GO:0065003 OTTP:OTTMUSP00000058209 OTTT:OTTMUST00000104081 UniParc:UPI00024675EF
definition	note : transcript_id=ENSMUST00000175842 protein_id : ENSMUSP00000135800 translation : MKRLAARCFAGLLILSPLTVISDSRPADSGKAIEDGNLEEMEEEVRLKKRKRRRNVDKDPVKEDVEKAKKRRGRPPAEKLSPNPPKLTKQMNAIIDTVINYKDRCNVEKVPCNSQLEIEGNSSGRQLSEVFIQLPSRKDLPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEEESNEEEEEDDEEESESE

name	Smarca2 (ENSMUSG00000024921) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000104082 Vega_transcript:Smarca2-017 Uniprot/SPTREMBL:H3BJM2 EMBL:AC118249 EMBL:AC118472 GO:GO:0000790 GO:GO:0001105 GO:GO:0005515 GO:GO:0005634 GO:GO:0005654 GO:GO:0006325 GO:GO:0006334 GO:GO:0006338 GO:GO:0008152 GO:GO:0008285 GO:GO:0016514 GO:GO:0016887 GO:GO:0030308 GO:GO:0035887 GO:GO:0043231 GO:GO:0044212 GO:GO:0045111 GO:GO:0045892 GO:GO:0045893 GO:GO:0045944 GO:GO:0071564 GO:GO:0071565 GO:GO:0090544 MGI_trans_name:Smarca2-017 Vega_translation:222488 Vega_translation:OTTMUSP00000058210 goslim_goa:GO:0000228 goslim_goa:GO:0000988 goslim_goa:GO:0003674 goslim_goa:GO:0003677 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0005694 goslim_goa:GO:0005856 goslim_goa:GO:0006461 goslim_goa:GO:0008150 goslim_goa:GO:0016887 goslim_goa:GO:0022607 goslim_goa:GO:0030154 goslim_goa:GO:0043226 goslim_goa:GO:0043234 goslim_goa:GO:0048856 goslim_goa:GO:0051276 goslim_goa:GO:0065003 OTTP:OTTMUSP00000058210 OTTT:OTTMUST00000104082 UniParc:UPI00024675F0
definition	note : transcript_id=ENSMUST00000175953 protein_id : ENSMUSP00000135042 translation : MEEEVRLKKRKRRRNVDKDPVKEDVEKAKKRRGRPPAEKLSPNPPKLTKQMNAIIDTVINYKDSSGRQLSEVFIQLPSRKDLP

name	Smarca2 (ENSMUSG00000024921) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000104067 Vega_transcript:Smarca2-006 Uniprot/SPTREMBL:H3BKN5 UCSC:uc008hbr.1 EMBL:AC118249 EMBL:AC118472 GO:GO:0000790 GO:GO:0001105 GO:GO:0005515 GO:GO:0005634 GO:GO:0005654 GO:GO:0006325 GO:GO:0006334 GO:GO:0006338 GO:GO:0008152 GO:GO:0008285 GO:GO:0016514 GO:GO:0016887 GO:GO:0030308 GO:GO:0035887 GO:GO:0043231 GO:GO:0044212 GO:GO:0045111 GO:GO:0045892 GO:GO:0045893 GO:GO:0045944 GO:GO:0071564 GO:GO:0071565 GO:GO:0090544 MGI_trans_name:Smarca2-006 Vega_translation:222489 Vega_translation:OTTMUSP00000058201 goslim_goa:GO:0000228 goslim_goa:GO:0000988 goslim_goa:GO:0003674 goslim_goa:GO:0003677 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0005694 goslim_goa:GO:0005856 goslim_goa:GO:0006461 goslim_goa:GO:0008150 goslim_goa:GO:0016887 goslim_goa:GO:0022607 goslim_goa:GO:0030154 goslim_goa:GO:0043226 goslim_goa:GO:0043234 goslim_goa:GO:0048856 goslim_goa:GO:0051276 goslim_goa:GO:0065003 OTTP:OTTMUSP00000058201 OTTT:OTTMUST00000104067 UniParc:UPI00024675F1
definition	note : transcript_id=ENSMUST00000176731 protein_id : ENSMUSP00000135460 translation : GRPPAEKLSPNPPKLTKQMNAIIDTVINYKDRSESVIISIGAWETWRKTSCFSVTTHRHSTWKDPRSTKTPLSYSQCLRVLGRKLPKKKRVRKKAMKKRKKMMKRSRSQRRNL

name	Smarca2 (ENSMUSG00000024921) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000104083 Vega_transcript:Smarca2-018 Uniprot/SPTREMBL:Q99KH6 UCSC:uc012bjx.1 EMBL:AC118249 EMBL:AC118472 EMBL:BC004653 GO:GO:0000790 GO:GO:0001105 GO:GO:0005515 GO:GO:0005634 GO:GO:0005654 GO:GO:0006325 GO:GO:0006334 GO:GO:0006338 GO:GO:0008152 GO:GO:0008285 GO:GO:0016514 GO:GO:0016887 GO:GO:0030308 GO:GO:0035887 GO:GO:0043231 GO:GO:0044212 GO:GO:0045111 GO:GO:0045892 GO:GO:0045893 GO:GO:0045944 GO:GO:0071564 GO:GO:0071565 GO:GO:0090544 MGI_trans_name:Smarca2-018 Vega_translation:222490 Vega_translation:OTTMUSP00000058211 goslim_goa:GO:0000228 goslim_goa:GO:0000988 goslim_goa:GO:0003674 goslim_goa:GO:0003677 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0005694 goslim_goa:GO:0005856 goslim_goa:GO:0006461 goslim_goa:GO:0008150 goslim_goa:GO:0016887 goslim_goa:GO:0022607 goslim_goa:GO:0030154 goslim_goa:GO:0043226 goslim_goa:GO:0043234 goslim_goa:GO:0048856 goslim_goa:GO:0051276 goslim_goa:GO:0065003 protein_id:AAH04653.1 OTTP:OTTMUSP00000058211 OTTT:OTTMUST00000104083 UniParc:UPI00000E78BF
definition	note : transcript_id=ENSMUST00000177116 protein_id : ENSMUSP00000135116 translation : MLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEEESNEEEEEDDEEESESEAKSVKVKIKLNKKEEKGRDTGKGKKRPNRGKAKPVVSDFDSDEEQEENEQSEASGTDNE

name	Smarca2 (ENSMUSG00000024921) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000104077 Vega_transcript:Smarca2-014 Uniprot/SPTREMBL:Q99KH6 UCSC:uc012bjx.1 EMBL:AC118249 EMBL:AC118472 EMBL:BC004653 GO:GO:0000790 GO:GO:0001105 GO:GO:0005515 GO:GO:0005634 GO:GO:0005654 GO:GO:0006325 GO:GO:0006334 GO:GO:0006338 GO:GO:0008152 GO:GO:0008285 GO:GO:0016514 GO:GO:0016887 GO:GO:0030308 GO:GO:0035887 GO:GO:0043231 GO:GO:0044212 GO:GO:0045111 GO:GO:0045892 GO:GO:0045893 GO:GO:0045944 GO:GO:0071564 GO:GO:0071565 GO:GO:0090544 MGI_trans_name:Smarca2-014 Vega_translation:222491 Vega_translation:OTTMUSP00000058212 goslim_goa:GO:0000228 goslim_goa:GO:0000988 goslim_goa:GO:0003674 goslim_goa:GO:0003677 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0005694 goslim_goa:GO:0005856 goslim_goa:GO:0006461 goslim_goa:GO:0008150 goslim_goa:GO:0016887 goslim_goa:GO:0022607 goslim_goa:GO:0030154 goslim_goa:GO:0043226 goslim_goa:GO:0043234 goslim_goa:GO:0048856 goslim_goa:GO:0051276 goslim_goa:GO:0065003 protein_id:AAH04653.1 OTTP:OTTMUSP00000058212 OTTT:OTTMUST00000104077 UniParc:UPI00000E78BF
definition	note : transcript_id=ENSMUST00000177484 protein_id : ENSMUSP00000135869 translation : MLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEEESNEEEEEDDEEESESEAKSVKVKIKLNKKEEKGRDTGKGKKRPNRGKAKPVVSDFDSDEEQEENEQSEASGTDNE

name
type	misc_feature
link
xref
definition	note : contig AC118472.8 1..207146(-1)

name	Smarca2 (ENSMUSG00000024921)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000104065 Vega_transcript:OTTMUST00000104065 MGI_trans_name:Smarca2-004 OTTT:OTTMUST00000104065
definition	note : processed_transcript note : transcript_id=ENSMUST00000175935

name	Smarca2 (ENSMUSG00000024921)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000104078 Vega_transcript:OTTMUST00000104078 MGI_trans_name:Smarca2-019 OTTT:OTTMUST00000104078
definition	note : retained_intron note : transcript_id=ENSMUST00000176700

name	Smarca2 (ENSMUSG00000024921)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000104069 Vega_transcript:OTTMUST00000104069 MGI_trans_name:Smarca2-008 OTTT:OTTMUST00000104069
definition	note : processed_transcript note : transcript_id=ENSMUST00000176494

name	4931403E22Rik (ENSMUSG00000093772)
type	misc_RNA
link	VEGA Ensembl MGI
xref	RefSeq_ncRNA:NR_045306 Vega_transcript:OTTMUST00000104068 Vega_transcript:OTTMUST00000104068 UCSC:uc029trw.1 Clone_based_vega_transcript:RP23-187N14.2-001 MGI_trans_name:4931403E22Rik-001 OTTT:OTTMUST00000104068
definition	note : processed_transcript note : transcript_id=ENSMUST00000177048

Polymorphisms Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Smarca2 (ENSMUSG00000024921)
Transcript ID	ENSMUST00000112637

Reports
substitution
cSNPs	3
Insertion	29
Deletion	41
SNPs	-1kb 26743801(c.-8050G>A), 26743965(c.-7886C>G), 26744128(c.-7723C>A), 26744227(c.-7624A>G), 26744420(c.-7431C>A), 26744465(c.-7386A>G), 26744483(c.-7368T>C), 26744526(c.-7325T>A), 26744588(c.-7263T>A), 26744822(c.-7029C>G), 26744982(c.-6869A>G), 26745145(c.-6706C>T), 26745209(c.-6642G>T), 26745237(c.-6614G>A), 26745243(c.-6608G>T), 26745253(c.-6598A>T), 26745339(c.-6512G>A), 26745414(c.-6437G>A), 26745640(c.-6211T>C), 26745689(c.-6162C>T), 26745820(c.-6031T>G), 26745845(c.-6006G>C), 26745908(c.-5943T>C), 26745928(c.-5923A>G), 26745946(c.-5905G>A), 26745960(c.-5891A>C), 26746094(c.-5757T>A), 26746132(c.-5719G>A), 26746634(c.-5217G>A), 26746687(c.-5164C>T), 26746943(c.-4908C>T), 26746951(c.-4900T>C), 26746952(c.-4899A>G), 26747032(c.-4819T>A), 26747033(c.-4818A>C), 26747035(c.-4816G>A), 26747336(c.-4515C>T), 26747342(c.-4509C>A), 26747345(c.-4506C>A), 26747536(c.-4315G>A), 26747579(c.-4272C>G), 26747706(c.-4145T>A), 26747884(c.-3967A>G), 26747952(c.-3899A>G), 5'UTR CDS 26774295(c.522G>A), 26776201(c.633C>T), 26776231(c.663A>G), 3'UTR 26777559(c.189T>C), 26777753(c.383T>C), 26778119(c.749A>G), 26778242(c.872A>C), INTRON 26748753(c.-159+209A>G), 26749207(c.-158-645G>A), 26749287(c.-158-565T>C), 26750333(c.-63+386T>A), 26750509(c.-63+562A>T), 26751072(c.-62-50T>C), 26751336(c.-28+180A>C), 26751402(c.-28+246T>G), 26751404(c.-28+248T>C), 26751423(c.-28+267T>C), 26751439(c.-28+283C>T), 26751489(c.-28+333C>T), 26751703(c.-27-121A>G), 26751800(c.-27-24T>C), 26751817(c.-27-7T>C), 26752574(c.191+533A>G), 26752984(c.191+943A>C), 26753148(c.191+1107T>C), 26753321(c.191+1280A>G), 26753325(c.191+1284A>G), 26753413(c.191+1372T>G), 26753661(c.191+1620T>G), 26753870(c.191+1829C>T), 26753896(c.191+1855C>T), 26753966(c.191+1925T>A), 26753968(c.191+1927T>A), 26753970(c.191+1929A>T), 26753972(c.191+1931A>T), 26754083(c.191+2042C>G), 26755138(c.191+3097A>G), 26755139(c.191+3098T>C), 26755190(c.191+3149G>C), 26755245(c.191+3204C>T), 26755399(c.191+3358A>T), 26755413(c.191+3372G>A), 26755425(c.191+3384A>G), 26755517(c.191+3476C>T), 26755625(c.191+3584T>C), 26755688(c.191+3647T>C), 26755693(c.191+3652G>C), 26755699(c.191+3658T>C), 26755870(c.191+3829C>T), 26755892(c.191+3851C>T), 26756092(c.191+4051G>A), 26756117(c.191+4076C>T), 26756208(c.191+4167T>C), 26756241(c.191+4200T>C), 26756286(c.191+4245A>G), 26756482(c.191+4441G>A), 26756485(c.191+4444G>A), 26756554(c.191+4513C>T), 26756623(c.191+4582C>A), 26756679(c.191+4638T>C), 26756876(c.191+4835T>G), 26756882(c.191+4841A>C), 26756884(c.191+4843T>C), 26756964(c.191+4923T>C), 26756966(c.191+4925T>A), 26757008(c.191+4967T>C), 26757032(c.191+4991A>G), 26757170(c.191+5129T>C), 26757339(c.191+5298C>T), 26757467(c.191+5426A>G), 26757510(c.191+5469T>A), 26757562(c.191+5521C>G), 26757577(c.191+5536A>G), 26757578(c.191+5537C>T), 26757604(c.191+5563C>T), 26757659(c.191+5618C>T), 26757912(c.191+5871G>A), 26758328(c.191+6287C>T), 26758482(c.191+6441G>A), 26758514(c.191+6473G>A), 26758571(c.191+6530G>A), 26758576(c.191+6535G>A), 26758583(c.191+6542C>T), 26758602(c.191+6561A>G), 26758631(c.191+6590G>C), 26758818(c.191+6777C>A), 26758822(c.191+6781T>G), 26758858(c.191+6817A>G), 26758888(c.191+6847C>T), 26758915(c.191+6874T>A), 26759061(c.191+7020T>C), 26759086(c.191+7045T>C), 26759215(c.191+7174T>G), 26759218(c.191+7177T>G), 26759418(c.191+7377G>A), 26759456(c.191+7415C>T), 26759465(c.191+7424G>T), 26759548(c.191+7507C>T), 26759578(c.191+7537G>A), 26759581(c.191+7540C>T), 26759588(c.191+7547A>T), 26759623(c.191+7582C>T), 26759645(c.191+7604G>A), 26759669(c.191+7628A>G), 26759719(c.191+7678A>G), 26759737(c.191+7696G>A), 26759747(c.191+7706T>G), 26759754(c.191+7713A>T), 26759756(c.191+7715G>A), 26759763(c.191+7722A>C), 26760199(c.191+8158T>C), 26760249(c.191+8208C>A), 26760627(c.191+8586C>G), 26760684(c.191+8643C>T), 26760732(c.191+8691A>T), 26760794(c.191+8753C>A), 26760795(c.191+8754C>A), 26760857(c.191+8816A>G), 26761080(c.191+9039C>T), 26761173(c.191+9132C>T), 26761216(c.191+9175C>T), 26761276(c.191+9235A>G), 26761602(c.192-9336T>C), 26761634(c.192-9304G>A), 26761791(c.192-9147A>G), 26761915(c.192-9023C>G), 26762059(c.192-8879A>G), 26762139(c.192-8799C>A), 26762166(c.192-8772T>G), 26762236(c.192-8702C>T), 26762269(c.192-8669C>T), 26762281(c.192-8657T>C), 26762298(c.192-8640T>G), 26762331(c.192-8607A>C), 26762342(c.192-8596T>A), 26762648(c.192-8290G>T), 26762897(c.192-8041A>G), 26763434(c.192-7504T>C), 26763451(c.192-7487G>A), 26763735(c.192-7203G>A), 26763906(c.192-7032A>G), 26764161(c.192-6777C>T), 26764284(c.192-6654A>G), 26764423(c.192-6515A>C), 26764453(c.192-6485T>C), 26764763(c.192-6175T>C), 26764846(c.192-6092A>G), 26764847(c.192-6091A>G), 26764937(c.192-6001A>C), 26764940(c.192-5998A>T), 26765106(c.192-5832G>A), 26765165(c.192-5773T>C), 26765388(c.192-5550C>A), 26765829(c.192-5109G>T), 26765868(c.192-5070C>T), 26765913(c.192-5025C>G), 26766049(c.192-4889T>G), 26766065(c.192-4873A>G), 26766277(c.192-4661C>T), 26766343(c.192-4595C>A), 26766354(c.192-4584T>G), 26766360(c.192-4578T>C), 26766520(c.192-4418C>A), 26766523(c.192-4415A>T), 26766528(c.192-4410T>G), 26766530(c.192-4408T>A), 26766583(c.192-4355C>T), 26766632(c.192-4306C>T), 26766745(c.192-4193A>G), 26766758(c.192-4180T>G), 26766766(c.192-4172A>C), 26766839(c.192-4099G>A), 26766975(c.192-3963G>A), 26767015(c.192-3923T>C), 26767054(c.192-3884A>G), 26767180(c.192-3758C>G), 26767236(c.192-3702A>T), 26767430(c.192-3508C>T), 26767507(c.192-3431T>C), 26767516(c.192-3422G>A), 26767920(c.192-3018A>C), 26768112(c.192-2826A>T), 26768429(c.192-2509G>C), 26768494(c.192-2444A>T), 26768620(c.192-2318C>T), 26768848(c.192-2090C>T), 26769343(c.192-1595C>T), 26769636(c.192-1302C>T), 26770053(c.192-885A>G), 26770076(c.192-862G>A), 26770140(c.192-798A>G), 26770179(c.192-759T>C), 26770528(c.192-410G>A), 26770572(c.192-366G>T), 26770839(c.192-99G>A), 26771326(c.298-182T>C), 26771369(c.298-139C>T), 26771613(c.399+4T>C), 26771627(c.399+18A>G), 26771673(c.399+64T>A), 26771747(c.399+138T>G), 26771758(c.399+149T>C), 26771786(c.399+177T>G), 26771794(c.399+185A>C), 26771885(c.399+276T>C), 26772229(c.399+620T>C), 26772440(c.399+831T>C), 26773033(c.400-1140A>C), 26773280(c.400-893C>T), 26773321(c.400-852T>G), 26773495(c.400-678C>T), 26773684(c.400-489T>A), 26773706(c.400-467C>T), 26773707(c.400-466T>C), 26773838(c.400-335C>A), 26773839(c.400-334G>A), 26773874(c.400-299G>C), 26773907(c.400-266C>G), 26773942(c.400-231T>A), 26773960(c.400-213G>A), 26774043(c.400-130A>G), 26774315(c.532+10G>A), 26774513(c.532+208G>A), 26774692(c.532+387T>C), 26774837(c.532+532A>C), 26775062(c.532+757C>T), 26775226(c.533-875T>C), 26775369(c.533-732A>G), 26775580(c.533-521T>C), 26775640(c.533-461G>A), 26775666(c.533-435T>C), 26775684(c.533-417C>T), 26775751(c.533-350T>C), 26776002(c.533-99G>A), 26776043(c.533-58G>A), 26776069(c.533-32T>C), 26776328(c.675+85C>G), 26776395(c.675+152T>C), 26776407(c.675+164A>G), 26776585(c.675+342G>A), 26776593(c.675+350T>A), 26776597(c.675+354A>G), 26776604(c.675+361A>G), 26776672(c.675+429C>A), 26776715(c.675+472T>A), 26776720(c.675+477T>A), 26776909(c.676-426C>T), 26777083(c.676-252A>G), 26777189(c.676-146A>G), +1kb 26778313(c.943G>T), 26778346(c.976C>T), 26778400(c.1030A>G), 26778422(c.1052G>T), 26778432(c.1062C>A), 26778477(c.1107A>T), 26778598(c.1228T>G), 26778691(c.1321T>A), 26778744(c.1374T>C), 26778843(c.1473A>T), 26778902(c.1532T>C), 26778903(c.1533A>G), 26778969(c.1599G>A), 26778999(c.1629G>A), 26779139(c.1769C>T), 26779151(c.1781T>C), 26779212(c.1842T>C), 26779256(c.1886T>A), 26779258(c.1888T>C), 26779341(c.1971T>C), 26779391(c.2021T>C), 26779421(c.2051A>G), 26779426(c.2056C>G), 26779440(c.2070G>A), 26779790(c.2420C>A), 26779794(c.2424T>C), 26779795(c.2425C>G), 26779844(c.2474G>A), 26780101(c.2731C>T), 26780210(c.2840G>A), 26780434(c.3064C>T), 26780799(c.3429G>A), 26780854(c.3484T>C), 26780896(c.3526A>T), 26780897(c.3527A>G), 26780898(c.3528C>G), 26780906(c.3536C>T), 26780907(c.3537C>T), 26780974(c.3604T>C), 26781000(c.3630T>G), 26781019(c.3649G>C), 26781043(c.3673T>A), 26781086(c.3716A>C), 26781087(c.3717G>A), 26781129(c.3759T>C), 26781202(c.3832C>T), 26781236(c.3866A>C), 26781256(c.3886G>A), 26781302(c.3932T>G), 26781349(c.3979A>G), 26781351(c.3981C>T), 26781371(c.4001C>T), 26781392(c.4022C>A), 26781464(c.4094A>G), 26781481(c.4111A>G), 26781482(c.4112A>C), 26781510(c.4140A>G), 26781800(c.4430G>A), 26782385(c.5015C>T), 26782391(c.5021C>T), 26782401(c.5031T>C), 26782428(c.5058T>C), 26782867(c.5497G>A), 26783050(c.5680T>C),
Insertions	-1kb 26744414 (c.-7437_-7436insC), 26744416 (c.-7435_-7434insAT), 26745450 (c.-6401_-6400insAGCAC), 5'UTR CDS 3'UTR 26777596 (c.226_227insT), 26778064 (c.703dupT), 26778071 (c.701_702insCT), INTRON 26749235 (c.-158-618_-158-617dupAA), 26750483 (c.-63+536dupT), 26755014 (c.191+2983dupA), 26759224 (c.191+7183_191+7184insTCTT), 26761856 (c.192-9082dupG), 26762434 (c.192-8504_192-8503insT), 26764462 (c.192-6475_192-6474insGGGGG), 26764646 (c.192-6292dupA), 26764708 (c.192-6224_192-6222dupAAA), 26764717 (c.192-6221_192-6220insAA), 26766223 (c.192-4707dupT), 26766526 (c.192-4411dupC), 26768706 (c.192-2230_192-2228dupCAT), 26773767 (c.400-406_400-405insA), 26774006 (c.400-166_400-165dupAG), 26775522 (c.533-570_533-569dupTT), 26776063 (c.533-35_533-34insTTGA), 26776491 (c.675+250dupA), +1kb 26779265 (c.1895_1896insC), 26779454 (c.2084_2085insTTTTT), 26781151 (c.3781_3782insCAC), 26782143 (c.4773_4774insTT), 26782910 (c.5540_*5541insG),
Deletions	-1kb 26745883 (c.-5967_-5966delAC), 26746045 (c.-5805_-5804delGG), 26747244 (c.-4606_-4605delAC), 26748383 (c.-3467delC), 5'UTR CDS 3'UTR 26778015 (c.646_647delAA), INTRON 26748605 (c.-159+64_-159+67delGTTT), 26748645 (c.-159+102_-159+104delCTT), 26748659 (c.-159+126_-159+128delCCC), 26748668 (c.-159+125_-159+131delCCCCAGC), 26749148 (c.-159+605delT), 26749382 (c.-158-469_-158-465delGGGTG), 26749475 (c.-158-366delA), 26750265 (c.-63+319delC), 26750551 (c.-62-570_-62-569delAC), 26750833 (c.-62-288_-62-287delGA), 26750933 (c.-62-188_-62-187delCT), 26751189 (c.-28+50_-28+53delGTGT), 26751371 (c.-28+221_-28+222delTG), 26753499 (c.191+1469delT), 26756391 (c.191+4353_191+4358delGTTCGT), 26759003 (c.191+6963_191+6965delCAG), 26760073 (c.191+8039delG), 26761933 (c.192-9004_192-8995delGGGTGGGGGT), 26764331 (c.192-6606_192-6605delCC), 26765522 (c.192-5415delG), 26766106 (c.192-4831_192-4829delGGC), 26766490 (c.192-4447_192-4443delACCCC), 26767531 (c.192-3405delA), 26769909 (c.192-1028delC), 26769920 (c.192-1017_192-1016delTG), 26770249 (c.192-688delA), 26771299 (c.298-208_298-207delTC), 26772020 (c.399+415_399+418delAGTA), 26772452 (c.399+861_399+862delTT), 26773525 (c.400-647_400-644delAAAA), 26773550 (c.400-622delA), 26773569 (c.400-603_400-600delTTTG), 26773842 (c.400-330delT), +1kb 26778703 (c.1334_1336delTAG), 26778860 (c.1491delC), 26781618 (c.4249delT),
coding sequence substitutions
premature termination by the nucleotide substitution	0
synonymous num	3
non-synonymous num	0
synonymous substitutions	26774295 (p.Ser174Ser), 26776201 (p.Pro211Pro), 26776231 (p.Glu221Glu),
non-synonymous substitutions
B6 transcript (ENSMUST00000112637)	MEEEVRLKKRKRRRNVDKDPVKEDVEKAKKRRGRPPAEKLSPNPPKLTKQMNAIIDTVIN YKDSSGRQLSEVFIQLPSRKDLPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLL CHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEEESNEEEEEDDEEESESEAKS VKVKIKLNKKEEKGRDTGKGKKRPNRGKAKPVVSDFDSDEEQEENEQSEASGTDNE*
MSMv4 transcript	MEEEVRLKKRKRRRNVDKDPVKEDVEKAKKRRGRPPAEKLSPNPPKLTKQMNAIIDTVIN YKDSSGRQLSEVFIQLPSRKDLPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLL CHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEEESNEEEEEDDEEESESEAKS VKVKIKLNKKEEKGRDTGKGKKRPNRGKAKPVVSDFDSDEEQEENEQSEASGTDNE*
homology	100.00 (237 / 237)

Exon Detail Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Smarca2 (ENSMUSG00000024921)
Transcript ID	ENSMUST00000112637


..........TATGCTTGGTTTGTTTGTTTTTCTTTTTCCTCTATTTACCATCTATAGTC
TAGTGATCTCCAGAATTCCTGCTTTACATGTTTCCTAGAGATGGTTTGGGCCATAGTGAG
AGGGCCCTATGACACTGCCGGGTGCTTCAGCGAGGAGGCAAGGGTGGGAACAATGGGCAG
AGTGGCTTTTTGTTCTCCCGCCGCTGTTTACCTATTCACAATCCTGAAGCTGCTCCGCTG
TGATGGGGGATGTCACGAGTAACTCCACCCCCGCCCCCACATCCCCCACCCCCTGGCTGA
GAAGGAGCATAATGCCGGCTTTCGAGACCTTCCCTCATTCAGTGAAAGATGTAGTTGGCG
TGTGTCTGGATGACAGAGAGGCACGGTGGAAGCCAGCACGTGTGGCTGATTATCGGGGCT
ACCATGTGCTTTACAGGCTCCGGTGTCTGCTCCGGAGCTGGTCCCTGCATGGCCGCCTCC
CGGCCGTCCTTGTCAGCACCGCTGCTTTCTTAAGAATCATTGGAGAGCAAGCCTGTCCCT
CCCTCGCCTGTGCGTGCACATCCTGTTTCGTGAAAACGTATTTTTCTTTTAAGCAAAATT
GAAAGAAAGAAAGGAGAGCGAGAAAGGAAGAGGGTGGGGGGAAGAAGGTTGCCATCCAGT
GGAGGAAGGAGTAATTTCTAGCTTCATTCAAGGAAGAAAAAAAAAAAAGCACACACACAC
ACACACACACACACACACGCAGGCTGAAGTATGCTTAACTCTTTTAACTTGGCTGGGGCT
TTTTAGCACCATATGGGTTCTTTCGTGACGTCCGGACCCGAAAGAGTGCAGTGTGCCTTT
AAGGAAAGAGGTACCTCACCAAACTTCCCTGTAGTTGTGCCTCACCATTTAGGTAGGGAA
GGAAAGTGTTAATTTCTTATTTGTACACTTTTTTTCCCCCCGACTTCCTTCCTATTCACT
TCATTAAATCTAGAGGCGGTTCAGCATGGGAGCCGTCTGTATGTTGAATT
AGGGCTCGCTCTCTTGCGCAACACGTCACCAGTCGGAAACTGGGGGTTTGCTTCTGTGATTTATTTCATTATTGTGCTGGTAAAAG
GTTTGGAAGGGAATTCTTTCTGGGG..........CAGCTCTCTTTTTTTTCCTGATCAG
CTGATGAAGAGACTAGCAGCTCGCTGCTTTGCCGGCTTGTTAATTTTATCCCCACTAACTGTGATTTCCGATAGCCGGCCTGCTGATAGTGGTAAG
GTAAATATCCTTTTTCGTTGCCGTC..........CGCTTTTATTATCTTTCTGCATTAG
TGCGGCTGGCTCTGGTTTAAAGCAAGCGTTTGCAG
GTAATTGGAAAAAAAGTGTTTTGCT..........TCCCTCCTTTCTTTCCTGCTTACAG
GCCATCGAAGACGGCAATTTGGAAGAAATGGAAGAGGAGGTACGGCTTAAGAAGAGAAAAAGACGAAGAAATGTGGATAAAGACCCCGTGAAGGAAGATGTGGAAAAAGCGAAGAAAAGAAGAGGCCGCCCTCCGGCTGAGAAGTTGTCACCAAATCCCCCAAAACTAACGAAGCAGATGAACGCCATCATTGATACTGTGATAAACTACAAAGACAG
GTGAGCCCCTGGCTCCTTCCTCTCC..........TCTGTTTGTCTCCCCCATCCTGCAG
TTCAGGGCGACAGCTCAGTGAAGTCTTCATTCAGTTACCTTCCAGGAAAGACTTACCAGAATACTATGAATTAATTAGGAAGCCAGTGGATTTCAAAAAGATAAAG
GTAGATACTCTGTTCCCTGTTGTTC..........TGTTTTCACCCGAAATTCCCCTCAG
GAGCGAATCCGTAATCATAAGTATCGGAGCCTGGGAGACCTGGAGAAAGACGTCATGCTTCTCTGTCACAACGCACAGACATTCAACTTGGAAGGATCCCAG
GTACGTGTCAAGTTGTCGGAGACGT..........AACAGCTGACACTTTGGCCATTTAG
ATCTACGAAGACTCCATTGTCCTACAGTCAGTGTTTAAGAGTGCTCGGCAGAAAATTGCCAAAGAAGAAGAGAGTGAGGAAGAAAGCAATGAAGAAGAGGAAGAAGATGATGAAGAGGAGTCAGAGTCAGAGG
GTAAGTCCCATGCACCTGGCCCTTC..........GGGGTCTCTCTTGTGACTGCTCTAG
CGAAATCTGTGAAGGTGAAAATCAAGCTGAATAAAAAGGAAGAGAAAGGCCGGGACACAGGGAAGGGCAAGAAGCGGCCAAACCGAGGCAAAGCCAAACCTGTCGTGAGCGATTTTGACAGTGACGAGGAGCAGGAAGAGAAC
GTGAGTGTACAGGCCGGGGCAGAGG..........CAGTCTGTCTACCTCTTTCTTTTAG
GAACAGTCAGAAGCAAGTGGAACTGATAACGAGTGACCATCCTGGACGTGAGCTTCCCGCGGTGGCAGAACCGAATGCTTTCTTCCCCCTCTCCTTCCTCCCCAGTGAGTTCACTTGCCATTCGGGCACACTGGGTTATTTCTCCGTCCTCATTGTCATCTAGAACTAGCTTTAGGGTAGTGCCAGACAAACATATGATATCATGGTGTAAAAAAAGAAACACACGCGTGCAGACACACTACACACACACACACACACACACACACACACACACACACATATTTGTAACATATTGTGACCAAATGGGCCTCAAAGATTCAAAGATTAAAAACAAAAAGCTTTTGATGGAAAAGATGTGGGTGGATAGTATATTTCTACAGGTGGGTCAGGTTTGGTAGCAGTTTGATGTGCTGGGTTCCGTCATCTGTTCTGATGAGAAGATTTTTATCTTCTGCAGTGCTGATGGCCGGGAGGAACCATTCAAAGCCACTGGTTATTTTGTTTTTCATCAGGCGATTTTCAAGATTTTCATTTGTTTCAGTATTGTTGGTTTTCTCTTTTCTCTTTTTTACACTGTGGTACATATAAGCAACTTGACTAGTGACAAATGTACAGTAGTTAGATATCACCTACATATACATTTTTCCATTTTATGCTCTATGATCTGAAGAACAAAAAAAAAAGCTTTTTGACTTGTATAAGATTTATGTCTACTGTAAACATTGCGGAATTTTTTTTTGTTCTTGTTTTATTGACAATGCTATTGAGTATTACAGTGTCTAGAGTACCCTGGATGGCTTCTCTTGTCCACCCGATCTCCCGTGTTACCAATGTGTATGGTCTCCTTCTCCCGAAAGTGTACTTAATCTTTGCTTTCTTTGCACAATGTCTTTGGTTGCAAGTCATACGCCTGAGGCAAATAAAATTCCAGTAATTTCC
AAGAATGTGGTGTTGGTACTTTCCTAATAAACCGATAACTTACCTTGACTCTGTCGCCTT
TTCTTTTATGAGTGCTAGGGCACTAAACCTCTGGGTGTGAGCAAGAGCTATCTGCAGATA
GAGAAGGGCCTTGTCATACAGATCATATTGGGGAGGGGAGAGATCATTGCTTTTCTGGCT
AAAAGAGAGGCTGCTGCCAGTCATCCTTTGCCTCCTGGCTTTAAATTTCATTCATTAGTC
AGAAAAATCTATAAAGGTAGGTAATGTGGAGACTGGCTCAGTCACTACCCATATGCCCTT
CCCACTAAGATTTAACAAAATTTTGTGCAGTGTGCCTTGTTTTAATAAGCCATGAGGATA
TAAGTCACAAGAGCAGGCACCCACAGTCCCACTGTCAAGCAGAAGGGATTAACACCCATC
CTCTAATAGTTAGTAGACCAGTCGCTAGCATATCTGCCAGTTGCCCTAAACTTGTGTTTG
GGTTTTCAATCATATGTCTTGATGTCTTTTTAAAGTCCTTAAAAAGCCAGCCCCGAGACT
GGTGCATCCTTCCCAAGGAACTGCCAGCATAGTCAAATGGAAGTTTTCCACGCCACTAAG
GAGGGTTAACATTTTCCTAAGGAGCAGGCGAGATTGCGCTAGGTGAGCTTTCCAGTGCCA
TATCAGACCACAGTCCTACGAAGCTTCATCTTCCCATCATGTCTGCTCTGACTTCCCAGC
TACTCAGAGCATTCCGGAATATTATATTTCTTTTTTGGGGGTTTGCTTATGGGATTTACT
TACTGCGGTAGGAATGGAGACTTCAGAGAGAAGCCATATTAACTTTCCACTCTGAGACCA
CTTAATATCAGTTCAAAGAAAACAGTGCCTCCCCCCTCTGCTTTCATTTCTGTATTTTCT
GTGCTGTTCTTGGCTTTGGAGGCCCTGCAGTTGGAAGGCGAGCCAAACCATTGTTTTTCT
GGTCCAAGCCTTCTCTGCCTGGTGTGTGTGCTCCCTCTTC..........

No.	Exon / Intron	Start	End	Start Phase	End Phase	Length	Sequence
	5' upstream sequence						..........TATGCTTGGTTTGTTTGTTTTTCTTTTTCCTCTATTTACCATCTATAGTC TAGTGATCTCCAGAATTCCTGCTTTACATGTTTCCTAGAGATGGTTTGGGCCATAGTGAG AGGGCCCTATGACACTGCCGGGTGCTTCAGCGAGGAGGCAAGGGTGGGAACAATGGGCAG AGTGGCTTTTTGTTCTCCCGCCGCTGTTTACCTATTCACAATCCTGAAGCTGCTCCGCTG TGATGGGGGATGTCACGAGTAACTCCACCCCCGCCCCCACATCCCCCACCCCCTGGCTGA GAAGGAGCATAATGCCGGCTTTCGAGACCTTCCCTCATTCAGTGAAAGATGTAGTTGGCG TGTGTCTGGATGACAGAGAGGCACGGTGGAAGCCAGCACGTGTGGCTGATTATCGGGGCT ACCATGTGCTTTACAGGCTCCGGTGTCTGCTCCGGAGCTGGTCCCTGCATGGCCGCCTCC CGGCCGTCCTTGTCAGCACCGCTGCTTTCTTAAGAATCATTGGAGAGCAAGCCTGTCCCT CCCTCGCCTGTGCGTGCACATCCTGTTTCGTGAAAACGTATTTTTCTTTTAAGCAAAATT GAAAGAAAGAAAGGAGAGCGAGAAAGGAAGAGGGTGGGGGGAAGAAGGTTGCCATCCAGT GGAGGAAGGAGTAATTTCTAGCTTCATTCAAGGAAGAAAAAAAAAAAAGCACACACACAC ACACACACACACACACACGCAGGCTGAAGTATGCTTAACTCTTTTAACTTGGCTGGGGCT TTTTAGCACCATATGGGTTCTTTCGTGACGTCCGGACCCGAAAGAGTGCAGTGTGCCTTT AAGGAAAGAGGTACCTCACCAAACTTCCCTGTAGTTGTGCCTCACCATTTAGGTAGGGAA GGAAAGTGTTAATTTCTTATTTGTACACTTTTTTTCCCCCCGACTTCCTTCCTATTCACT TCATTAAATCTAGAGGCGGTTCAGCATGGGAGCCGTCTGTATGTTGAATT
1	EXON 1	26,748,459	26,748,544	-	-	86	AGGGCTCGCTCTCTTGCGCAACACGTCACCAGTCGGAAACTGGGGGTTTGCTTCTGTGAT TTATTTCATTATTGTGCTGGTAAAAG
	INTRON 1 - 2	26,748,545	26,749,851			1,307	GTTTGGAAGGGAATTCTTTCTGGGG..........CAGCTCTCTTTTTTTTCCTGATCAG
2	EXON 2	26,749,852	26,749,947	-	-	96	CTGATGAAGAGACTAGCAGCTCGCTGCTTTGCCGGCTTGTTAATTTTATCCCCACTAACT GTGATTTCCGATAGCCGGCCTGCTGATAGTGGTAAG
	INTRON 2 - 3	26,749,948	26,751,121			1,174	GTAAATATCCTTTTTCGTTGCCGTC..........CGCTTTTATTATCTTTCTGCATTAG
3	EXON 3	26,751,122	26,751,156	-	-	35	TGCGGCTGGCTCTGGTTTAAAGCAAGCGTTTGCAG
	INTRON 3 - 4	26,751,157	26,751,823			667	GTAATTGGAAAAAAAGTGTTTTGCT..........TCCCTCCTTTCTTTCCTGCTTACAG
4	EXON 4	26,751,824	26,752,041	-	2	218	GCCATCGAAGACGGCAATTTGGAAGAAATGGAAGAGGAGGTACGGCTTAAGAAGAGAAAA AGACGAAGAAATGTGGATAAAGACCCCGTGAAGGAAGATGTGGAAAAAGCGAAGAAAAGA AGAGGCCGCCCTCCGGCTGAGAAGTTGTCACCAAATCCCCCAAAACTAACGAAGCAGATG AACGCCATCATTGATACTGTGATAAACTACAAAGACAG
	INTRON 4 - 5	26,752,042	26,770,937			18,896	GTGAGCCCCTGGCTCCTTCCTCTCC..........TCTGTTTGTCTCCCCCATCCTGCAG
5	EXON 5	26,770,938	26,771,043	2	0	106	TTCAGGGCGACAGCTCAGTGAAGTCTTCATTCAGTTACCTTCCAGGAAAGACTTACCAGA ATACTATGAATTAATTAGGAAGCCAGTGGATTTCAAAAAGATAAAG
	INTRON 5 - 6	26,771,044	26,771,507			464	GTAGATACTCTGTTCCCTGTTGTTC..........TGTTTTCACCCGAAATTCCCCTCAG
6	EXON 6	26,771,508	26,771,609	0	0	102	GAGCGAATCCGTAATCATAAGTATCGGAGCCTGGGAGACCTGGAGAAAGACGTCATGCTT CTCTGTCACAACGCACAGACATTCAACTTGGAAGGATCCCAG
	INTRON 6 - 7	26,771,610	26,774,172			2,563	GTACGTGTCAAGTTGTCGGAGACGT..........AACAGCTGACACTTTGGCCATTTAG
7	EXON 7	26,774,173	26,774,305	0	1	133	ATCTACGAAGACTCCATTGTCCTACAGTCAGTGTTTAAGAGTGCTCGGCAGAAAATTGCC AAAGAAGAAGAGAGTGAGGAAGAAAGCAATGAAGAAGAGGAAGAAGATGATGAAGAGGAG TCAGAGTCAGAGG
	INTRON 7 - 8	26,774,306	26,776,100			1,795	GTAAGTCCCATGCACCTGGCCCTTC..........GGGGTCTCTCTTGTGACTGCTCTAG
8	EXON 8	26,776,101	26,776,243	1	0	143	CGAAATCTGTGAAGGTGAAAATCAAGCTGAATAAAAAGGAAGAGAAAGGCCGGGACACAG GGAAGGGCAAGAAGCGGCCAAACCGAGGCAAAGCCAAACCTGTCGTGAGCGATTTTGACA GTGACGAGGAGCAGGAAGAGAAC
	INTRON 8 - 9	26,776,244	26,777,334			1,091	GTGAGTGTACAGGCCGGGGCAGAGG..........CAGTCTGTCTACCTCTTTCTTTTAG
9	EXON 9	26,777,335	26,778,273	0	-	939	GAACAGTCAGAAGCAAGTGGAACTGATAACGAGTGACCATCCTGGACGTGAGCTTCCCGC GGTGGCAGAACCGAATGCTTTCTTCCCCCTCTCCTTCCTCCCCAGTGAGTTCACTTGCCA TTCGGGCACACTGGGTTATTTCTCCGTCCTCATTGTCATCTAGAACTAGCTTTAGGGTAG TGCCAGACAAACATATGATATCATGGTGTAAAAAAAGAAACACACGCGTGCAGACACACT ACACACACACACACACACACACACACACACACACACACATATTTGTAACATATTGTGACC AAATGGGCCTCAAAGATTCAAAGATTAAAAACAAAAAGCTTTTGATGGAAAAGATGTGGG TGGATAGTATATTTCTACAGGTGGGTCAGGTTTGGTAGCAGTTTGATGTGCTGGGTTCCG TCATCTGTTCTGATGAGAAGATTTTTATCTTCTGCAGTGCTGATGGCCGGGAGGAACCAT TCAAAGCCACTGGTTATTTTGTTTTTCATCAGGCGATTTTCAAGATTTTCATTTGTTTCA GTATTGTTGGTTTTCTCTTTTCTCTTTTTTACACTGTGGTACATATAAGCAACTTGACTA GTGACAAATGTACAGTAGTTAGATATCACCTACATATACATTTTTCCATTTTATGCTCTA TGATCTGAAGAACAAAAAAAAAAGCTTTTTGACTTGTATAAGATTTATGTCTACTGTAAA CATTGCGGAATTTTTTTTTGTTCTTGTTTTATTGACAATGCTATTGAGTATTACAGTGTC TAGAGTACCCTGGATGGCTTCTCTTGTCCACCCGATCTCCCGTGTTACCAATGTGTATGG TCTCCTTCTCCCGAAAGTGTACTTAATCTTTGCTTTCTTTGCACAATGTCTTTGGTTGCA AGTCATACGCCTGAGGCAAATAAAATTCCAGTAATTTCC
	3' upstream sequence						AAGAATGTGGTGTTGGTACTTTCCTAATAAACCGATAACTTACCTTGACTCTGTCGCCTT TTCTTTTATGAGTGCTAGGGCACTAAACCTCTGGGTGTGAGCAAGAGCTATCTGCAGATA GAGAAGGGCCTTGTCATACAGATCATATTGGGGAGGGGAGAGATCATTGCTTTTCTGGCT AAAAGAGAGGCTGCTGCCAGTCATCCTTTGCCTCCTGGCTTTAAATTTCATTCATTAGTC AGAAAAATCTATAAAGGTAGGTAATGTGGAGACTGGCTCAGTCACTACCCATATGCCCTT CCCACTAAGATTTAACAAAATTTTGTGCAGTGTGCCTTGTTTTAATAAGCCATGAGGATA TAAGTCACAAGAGCAGGCACCCACAGTCCCACTGTCAAGCAGAAGGGATTAACACCCATC CTCTAATAGTTAGTAGACCAGTCGCTAGCATATCTGCCAGTTGCCCTAAACTTGTGTTTG GGTTTTCAATCATATGTCTTGATGTCTTTTTAAAGTCCTTAAAAAGCCAGCCCCGAGACT GGTGCATCCTTCCCAAGGAACTGCCAGCATAGTCAAATGGAAGTTTTCCACGCCACTAAG GAGGGTTAACATTTTCCTAAGGAGCAGGCGAGATTGCGCTAGGTGAGCTTTCCAGTGCCA TATCAGACCACAGTCCTACGAAGCTTCATCTTCCCATCATGTCTGCTCTGACTTCCCAGC TACTCAGAGCATTCCGGAATATTATATTTCTTTTTTGGGGGTTTGCTTATGGGATTTACT TACTGCGGTAGGAATGGAGACTTCAGAGAGAAGCCATATTAACTTTCCACTCTGAGACCA CTTAATATCAGTTCAAAGAAAACAGTGCCTCCCCCCTCTGCTTTCATTTCTGTATTTTCT GTGCTGTTCTTGGCTTTGGAGGCCCTGCAGTTGGAAGGCGAGCCAAACCATTGTTTTTCT GGTCCAAGCCTTCTCTGCCTGGTGTGTGTGCTCCCTCTTC..........

Sequence Detail Report

Gene Symbol (Gene ID)	Smarca2 (ENSMUSG00000024921)
Transcript ID	ENSMUST00000112637

		SNP Information
Strain :
Sequence Retrieve :
Exon translate : CDS Start ( 1 ) - End ( 237 ) -
Strand :	forward reverse
Show sequence :	nucleotide amino acid
Color information