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Target CDS Information

Gene Symbol (Gene ID) Myo1b (ENSMUSG00000018417)
Cross Reference
EMBL AC108840, AC123555, AC138680
GO GO:0000146, GO:0005524, GO:0005769, ...show all
goslim_goa GO:0003674, GO:0005575, GO:0005576, ...show all
MGI_trans_name Myo1b-013
OTTP OTTMUSP00000018713
OTTT OTTMUST00000041661
UCSC uc007axt.3
UniParc UPI0000DBECD0
Uniprot/SPTREMBL E9Q580
Vega_transcript Myo1b-013, OTTMUST00000041661
Vega_translation 179228, OTTMUSP00000018713
Definition protein_id:ENSMUSP00000110188
translation:
MPPLETMAKMEVKSSLLDNMIGVGDMVLLEPLNEETFIDNLKKRFDHNEIYTYIGSVVIS
VNPYRSLPIYSPEKVEDYRNRNFYELSPHIFALSDEAYRSLRDQDKDQCILITGESGAGK
TEASKLVMSYVAAVCGKGAEVNQVKEQLLQSNPVLEAFGNAKTVRNDNSSRFGKYMDIEF
DFKGDPLGGVISNYLLEKSRVVKQPRGERNFHVFYQLLSGASEELLYKLKLERDFSRYNY
LSLDSAKVNGVDDAANFRTVRNAMQIVGFLDHEAEAVLEVVAAVLKLGNIEFKPESRVNG
LDESKIKDKNELKEICELTSIDQVVLERAFSFRTVEAKQEKVSTTLNVAQAYYARDALAK
NLYSRLFSWLVNRINESIKAQTKVRKKVMGVLDIYGFEIFEDNSFEQFIINYCNEKLQQI
FIELTLKEEQEEYIREDIEWTHIDYFNNAIICDLIENNTNGILAMLDEECLRPGTVTDET
FLEKLNQVCATHQHFESRMSKCSRFLNDTTLPHSCFRIQHYAGKVLYQVEGFVDKNNDLL
YRDLSQAMWKAGHSLIKSLFPEGNPAKVNLKRPPTAGSQFKASVATLMRNLQTKNPNYIR
CIKPNDKKAAHIFNESLVCHQIRYLGLLENVRVRRAGYAFRQAYEPCLERYKMLCKQTWP
HWKGPARSGVEVLFNELEIPVEEHSFGRSKIFIRNPRTLFQLEDLRKQRLEDLATLIQKI
YRGWKCRTHFLLMKRSQVVIAAWYRRYAQQKRYQQIKSSALVIQSYIRGWKARKILRELK
HQKRCKEAATTIAAYWHGTQVRREYRKFFRANAGKKIYEFTLQRIVQKYLLEMKNKMPSL
SPIDKNWPSRPYLFLDSTHKELKRIFHLWRCKKYRDQFTDQQKLIYEEKLEASELFKDKK
ALYPSSVGQPFQGAYLEINKNPKYKKLKDAIEEKIIIAEVVNKINRANGKSTSRIFLLTN
NNLLLADQKSGQIKSEVPLVDVTKVSMSSQNDGFFAVHLKEGSEAASKGDFLFSSDHLIE
MATKLYRTTLSQTKQKLNIEISDEFLVQFRQDKVCVKFIQGNQKNGSVPTCKRKNNRLLE
VAVP

Chromosome 1
Length
Position(start - end)
155,965
51,751,173 - 51,907,139
Orient to Chromosome minus
Link Location : (1:51751173-51907139)
/

Detail Map


 

Report

Polymorphisms Report

Target Strain  MSMv4  JF1v3  KJRv1  SWNv1  CHDv1  NJLv1  BLG2v1  HMIv1  BFMv1  PGN2v1
Gene Symbol (Gene ID) Myo1b (ENSMUSG00000018417)
Transcript ID ENSMUST00000114541
Reports
substitution
cSNPs13
Insertion118
Deletion134
SNPs
+1kb
5'UTR
CDS
3'UTR
INTRON
-1kb
Insertions
+1kb
5'UTR
CDS
3'UTR
INTRON
-1kb
Deletions
+1kb
5'UTR
CDS
3'UTR
INTRON
-1kb
coding sequence substitutions
premature termination by the nucleotide substitution0
synonymous num12
non-synonymous num1
synonymous substitutions 51751275 (p.Gln1051Gln), 51755648 (p.Ser1042Ser), 51770807 (p.Gln764Gln), 51773299 (p.Cys726Cys), 51776314 (p.Asn630Asn), 51778374 (p.Ala582Ala), 51778467 (p.Ala551Ala), 51779606 (p.Thr509Thr), 51784497 (p.Lys416Lys), 51784530 (p.Phe405Phe), 51797062 (p.Ala329Ala), 51799577 (p.Ala246Ala),
non-synonymous substitutions 51760364 (p.Lys883Arg),
B6 transcript
(ENSMUST00000114541)
MPPLETMAKMEVKSSLLDNMIGVGDMVLLEPLNEETFIDNLKKRFDHNEIYTYIGSVVIS
VNPYRSLPIYSPEKVEDYRNRNFYELSPHIFALSDEAYRSLRDQDKDQCILITGESGAGK
TEASKLVMSYVAAVCGKGAEVNQVKEQLLQSNPVLEAFGNAKTVRNDNSSRFGKYMDIEF
DFKGDPLGGVISNYLLEKSRVVKQPRGERNFHVFYQLLSGASEELLYKLKLERDFSRYNY
LSLDSAKVNGVDDAANFRTVRNAMQIVGFLDHEAEAVLEVVAAVLKLGNIEFKPESRVNG
LDESKIKDKNELKEICELTSIDQVVLERAFSFRTVEAKQEKVSTTLNVAQAYYARDALAK
NLYSRLFSWLVNRINESIKAQTKVRKKVMGVLDIYGFEIFEDNSFEQFIINYCNEKLQQI
FIELTLKEEQEEYIREDIEWTHIDYFNNAIICDLIENNTNGILAMLDEECLRPGTVTDET
FLEKLNQVCATHQHFESRMSKCSRFLNDTTLPHSCFRIQHYAGKVLYQVEGFVDKNNDLL
YRDLSQAMWKAGHSLIKSLFPEGNPAKVNLKRPPTAGSQFKASVATLMRNLQTKNPNYIR
CIKPNDKKAAHIFNESLVCHQIRYLGLLENVRVRRAGYAFRQAYEPCLERYKMLCKQTWP
HWKGPARSGVEVLFNELEIPVEEHSFGRSKIFIRNPRTLFQLEDLRKQRLEDLATLIQKI
YRGWKCRTHFLLMKRSQVVIAAWYRRYAQQKRYQQIKSSALVIQSYIRGWKARKILRELK
HQKRCKEAATTIAAYWHGTQVRREYRKFFRANAGKKIYEFTLQRIVQKYLLEMKNKMPSL
SPIDKNWPSRPYLFLDSTHKELKRIFHLWRCKKYRDQFTDQQKLIYEEKLEASELFKDKK
ALYPSSVGQPFQGAYLEINKNPKYKKLKDAIEEKIIIAEVVNKINRANGKSTSRIFLLTN
NNLLLADQKSGQIKSEVPLVDVTKVSMSSQNDGFFAVHLKEGSEAASKGDFLFSSDHLIE
MATKLYRTTLSQTKQKLNIEISDEFLVQFRQDKVCVKFIQGNQKNGSVPTCKRKNNRLLE
VAVP*
MSMv4 transcript
MPPLETMAKMEVKSSLLDNMIGVGDMVLLEPLNEETFIDNLKKRFDHNEIYTYIGSVVIS
VNPYRSLPIYSPEKVEDYRNRNFYELSPHIFALSDEAYRSLRDQDKDQCILITGESGAGK
TEASKLVMSYVAAVCGKGAEVNQVKEQLLQSNPVLEAFGNAKTVRNDNSSRFGKYMDIEF
DFKGDPLGGVISNYLLEKSRVVKQPRGERNFHVFYQLLSGASEELLYKLKLERDFSRYNY
LSLDSAKVNGVDDAANFRTVRNAMQIVGFLDHEAEAVLEVVAAVLKLGNIEFKPESRVNG
LDESKIKDKNELKEICELTSIDQVVLERAFSFRTVEAKQEKVSTTLNVAQAYYARDALAK
NLYSRLFSWLVNRINESIKAQTKVRKKVMGVLDIYGFEIFEDNSFEQFIINYCNEKLQQI
FIELTLKEEQEEYIREDIEWTHIDYFNNAIICDLIENNTNGILAMLDEECLRPGTVTDET
FLEKLNQVCATHQHFESRMSKCSRFLNDTTLPHSCFRIQHYAGKVLYQVEGFVDKNNDLL
YRDLSQAMWKAGHSLIKSLFPEGNPAKVNLKRPPTAGSQFKASVATLMRNLQTKNPNYIR
CIKPNDKKAAHIFNESLVCHQIRYLGLLENVRVRRAGYAFRQAYEPCLERYKMLCKQTWP
HWKGPARSGVEVLFNELEIPVEEHSFGRSKIFIRNPRTLFQLEDLRKQRLEDLATLIQKI
YRGWKCRTHFLLMKRSQVVIAAWYRRYAQQKRYQQIKSSALVIQSYIRGWKARKILRELK
HQKRCKEAATTIAAYWHGTQVRREYRKFFRANAGKKIYEFTLQRIVQKYLLEMKNKMPSL
SPIDKNWPSRPYLFLDSTHKELKRIFHLWRCKKYRDQFTDQQRLIYEEKLEASELFKDKK
ALYPSSVGQPFQGAYLEINKNPKYKKLKDAIEEKIIIAEVVNKINRANGKSTSRIFLLTN
NNLLLADQKSGQIKSEVPLVDVTKVSMSSQNDGFFAVHLKEGSEAASKGDFLFSSDHLIE
MATKLYRTTLSQTKQKLNIEISDEFLVQFRQDKVCVKFIQGNQKNGSVPTCKRKNNRLLE
VAVP*
homology99.91 (1085 / 1085)

Exon Detail Report

Target Strain  MSMv4  JF1v3  KJRv1  SWNv1  CHDv1  NJLv1  BLG2v1  HMIv1  BFMv1  PGN2v1
Gene Symbol (Gene ID) Myo1b (ENSMUSG00000018417)
Transcript ID ENSMUST00000114541
No. Exon / Intron Start End Start Phase End Phase Length Sequence
5' upstream sequence
..........GAACTGATTGCTTCCTATCGCCCCACTCACAGTTCTCAGTGTGTAATCTC
TCCTCCCCGCTCCTTCCCTTTAAATTCTGTGCTATTCTCCCCTGCAGAGCTCTTTGCCGT
GTTCAGATAGGAAACATGCTCGCATCCTAGCCGACCATTTCTTCCTCCTTCAAAGAGTTT
CAAAAGCATTGCCAGCGTCCATTCACTTTAGAGCCAGAGCCCAGCTGCCTTGAGGAATAG
CTTAATTTTCATAACATTGGGTTTGCGCCAGTTTGCATTGCTAGCTGTATTTTTCAGTCC
TCCTATAATCCACTTACATTTCAAGTAGAGGAACCATAGTTATGAATGTGCACGTGACAG
GGTGAGCCACATAGGAAAAAGTTCTCATTTGCCTGACATCTCCAGGGTGCGGAGAAGTAG
TCATAGAAGCATGCGAACTGCCACGAAGGGTTGTGACTTAGGGCTTCCTCCTTTCATGTT
CTGTGACATTTGGGGGAAGGAAGTGCAGTGGGACTTCCCATGTAGGTTTTATGCATGACC
AAGGGGGTCTTGAACACCCATTATTAGGGCAGTTTCTTAAAACACCTTTCAGGCCTAGTG
AAGTTAATCTTGACTTGTTTATTTTTATCTTCTAAGCTCTATGTTTCTTACCTTCCTTAA
AGATAGAACTTGTGGAGTTGTTATTTTGATTTTGAATCCCCAAGTTCTGCAGAGATGCAC
ATGAAAGGATGTTGGCCGTACTTGAGACAGGGCCAGGCACAAAGTGCTGGTTTTGTTTCC
TGTGGAGGTGGCTCACTGTCCCCCAGACCCATCTAAATCTGTGCTTAGCTTGACTGTTTT
TACTAAAAAGCATCCTTATCACCCACTTATCTGTTTTCTTCGACCTTTTGTCCACCTAGG
TCATTGCTAAATTCAGCTTGCACTCTCTGTTGGAACCCTGAAGCCTTTATTCTGGTTTAG
ACTTTTAAAAGTACTTGCCCCAAATAGCTTGTTCCACAAAAAGAGTAGCA
1 EXON 1 51,907,131 51,907,316 - 0 186
GACTGGGAAAAATGACTCTCATAAATTACATAAAGAGGGTTCCTTGGCCAATGTTGCTAC
TACTTCATTTGAATTGCTTCCTTTGAAGTAAGTTTCCTTTCGGGATGACCTCCTGGCCTT
TGTGGATATGTGCAGTGAAGTTCTGAGAAGGAGCTGTGGCTGTCACACATCTGCCTGATG
CCTCCG
INTRON 1 - 2 51,883,227 51,907,130 23,904
GTAGGTACCCTCTTGAGGAACTTAT..........CCTGACTTCTTCTTTTTTCTTCCAG
2 EXON 2 51,883,083 51,883,226 0 0 144
CTGGAAACCATGGCCAAAATGGAGGTGAAATCCTCACTTCTGGACAATATGATCGGTGTT
GGAGATATGGTTCTTTTAGAGCCGCTCAATGAGGAGACGTTCATCGACAACCTGAAGAAG
CGCTTCGACCACAATGAGATATAT
INTRON 2 - 3 51,863,435 51,883,082 19,648
GTGAGTACCTGGAGGCTTTTCTGCC..........TTCTTTCTTTTTCTCTTATTTGCAG
3 EXON 3 51,863,319 51,863,434 0 2 116
ACATACATTGGGAGCGTGGTTATATCTGTTAACCCCTACCGGTCCTTGCCCATATATTCG
CCGGAGAAAGTGGAAGATTACAGAAATAGAAACTTCTATGAACTGAGCCCTCACAT
INTRON 3 - 4 51,834,544 51,863,318 28,775
GTAAGTACAGCTAGCAAACTCTTAA..........ATCCTCCCACATTTTTTTCTTGTAG
4 EXON 4 51,834,449 51,834,543 2 1 95
CTTTGCTTTGTCGGATGAAGCATACAGATCCCTCCGTGATCAAGATAAAGATCAATGCAT
TCTCATTACTGGGGAGAGTGGAGCAGGAAAAACAG
INTRON 4 - 5 51,824,202 51,834,448 10,247
GTGAGACCACCACCAAACTGACCTT..........GTAACATGGCTGTTTCCCTCCACAG
5 EXON 5 51,824,097 51,824,201 1 1 105
AGGCCAGCAAGCTCGTCATGTCCTATGTCGCTGCCGTGTGCGGAAAAGGAGCAGAAGTCA
ATCAGGTCAAGGAACAGCTTCTGCAGTCCAACCCTGTCCTGGAAG
INTRON 5 - 6 51,820,188 51,824,096 3,909
GTAAGGATTTCATGTTTGGTCCTTG..........GATGCATCTGTTTCTTTCTCGTTAG
6 EXON 6 51,820,141 51,820,187 1 0 47
CTTTTGGAAATGCCAAGACTGTGAGGAATGACAACTCATCTAGATTC
INTRON 6 - 7 51,813,067 51,820,140 7,074
GTAAGTATTTGTATAAGCTTAAGTG..........AACTTACAGAGTCTTTCTTTGACAG
7 EXON 7 51,813,003 51,813,066 0 1 64
GGCAAATACATGGATATTGAATTTGACTTTAAAGGCGATCCGCTGGGAGGAGTGATAAGT
AACT
INTRON 7 - 8 51,801,283 51,813,002 11,720
GTGAGTATTTTTACTTGACTCTTTA..........TCTTCTATTTTTTTTTTCCTTTCAG
8 EXON 8 51,801,184 51,801,282 1 1 99
ATCTTTTAGAGAAATCTCGTGTTGTTAAGCAGCCAAGAGGTGAAAGAAACTTCCATGTGT
TCTATCAGCTGCTCTCAGGCGCCTCTGAGGAGCTCCTCT
INTRON 8 - 9 51,799,636 51,801,183 1,548
GTAAGTCTGCGGTTCTGGCCTTAGG..........TCAATTTGTATGCATGACTCAACAG
9 EXON 9 51,799,532 51,799,635 1 0 104
ACAAGCTTAAGCTGGAGCGGGATTTCAGCAGATACAACTATCTGAGTCTGGACTCTGCCA
AAGTTAATGGTGTGGATGATGCTGCCAATTTCAGAACTGTTAGG
INTRON 9 - 10 51,797,536 51,799,531 1,996
GTAAGAAGTGCCTTCATTATACTTT..........GAAAACAGGTGCTTCTCTCCTCCAG
10 EXON 10 51,797,388 51,797,535 0 1 148
AATGCGATGCAGATCGTGGGCTTTCTGGATCATGAGGCCGAGGCTGTCCTGGAGGTAGTG
GCAGCCGTTTTGAAACTGGGGAACATCGAGTTCAAGCCTGAATCACGAGTGAATGGTTTG
GATGAAAGCAAAATCAAAGATAAAAATG
INTRON 10 - 11 51,797,118 51,797,387 270
GTAAGTTAGTGGACAAGCAGTTTGG..........TCTGTCCTTCTCTACTCCCCAACAG
11 EXON 11 51,796,999 51,797,117 1 0 119
AGTTAAAAGAAATTTGCGAGTTGACCAGCATCGATCAGGTGGTTTTAGAAAGAGCATTCA
GTTTCCGAACAGTTGAAGCGAAGCAGGAGAAAGTTTCAACCACGCTGAATGTGGCTCAG
INTRON 11 - 12 51,794,399 51,796,998 2,600
GTGGGTAAATTGTAACATGCAGAGG..........AGTTGTTCTTTTTTCTTTTTAATAG
12 EXON 12 51,794,312 51,794,398 0 0 87
GCTTATTATGCCCGTGATGCCCTGGCTAAAAACCTCTACAGCCGCTTGTTTTCATGGTTG
GTAAATCGTATCAACGAAAGCATTAAG
INTRON 12 - 13 51,793,706 51,794,311 606
GTATTGAATCTCTGTAAGACACTAT..........ATTATCTTATTAATATTTTTTTAAG
13 EXON 13 51,793,640 51,793,705 0 0 66
GCACAAACAAAAGTGAGAAAGAAGGTCATGGGTGTTCTGGACATTTATGGCTTTGAAATA
TTTGAG
INTRON 13 - 14 51,784,542 51,793,639 9,098
GTAAGTTTTTTTTTTTAAATGAGTA..........GTATTGCCTTCTTCTTACCACACAG
14 EXON 14 51,784,437 51,784,541 0 0 105
GATAACAGCTTTGAGCAGTTTATTATTAACTATTGTAATGAAAAACTTCAACAAATCTTC
ATCGAACTTACCCTCAAAGAAGAGCAAGAGGAATATATTCGGGAG
INTRON 14 - 15 51,782,033 51,784,436 2,404
GTAAGGTTGAACCAGTCTAAGAGGT..........TGATTTTGTTCGGTTTTGTTTTTAG
15 EXON 15 51,781,970 51,782,032 0 0 63
GACATAGAATGGACTCACATTGACTACTTCAACAATGCTATCATTTGTGACCTAATAGAA
AAT
INTRON 15 - 16 51,779,762 51,781,969 2,208
GTGAGTACTTCGGTATTAAAGGGAT..........AACACCTTTATTTCTTTCCTCCCAG
16 EXON 16 51,779,561 51,779,761 0 0 201
AACACAAATGGAATCTTGGCCATGCTGGATGAAGAGTGCCTGAGACCCGGCACTGTTACA
GATGAGACCTTCCTGGAAAAGCTGAACCAAGTCTGTGCCACCCACCAGCACTTTGAGAGC
AGGATGAGCAAGTGTTCCCGCTTTCTCAACGACACGACCCTGCCCCACAGCTGCTTCAGA
ATCCAGCATTATGCTGGCAAG
INTRON 16 - 17 51,778,548 51,779,560 1,013
GTACCCCACGATGTTGTCCCCAGGG..........CGTGTGCTGTCACTATCACTCACAG
17 EXON 17 51,778,321 51,778,547 0 2 227
GTGCTCTACCAGGTGGAAGGATTTGTTGACAAGAACAATGACCTTCTGTACCGGGACCTG
TCTCAAGCCATGTGGAAGGCTGGCCACTCCCTCATCAAGTCTCTGTTTCCTGAAGGAAAT
CCTGCAAAGGTCAACCTGAAGAGACCTCCCACCGCAGGCTCCCAGTTCAAGGCATCTGTG
GCCACGCTGATGAGAAACCTGCAGACCAAGAACCCGAACTACATCAG
INTRON 17 - 18 51,776,405 51,778,320 1,916
GTGCTTCTGGGACTTGAGTTCATAT..........ACCTAAAATACTTGAAATGTTTTAG
18 EXON 18 51,776,204 51,776,404 2 2 201
GTGCATCAAGCCAAATGATAAAAAGGCAGCTCACATTTTCAATGAGAGTCTCGTATGCCA
TCAGATCAGGTACCTGGGTCTTTTGGAGAATGTTCGAGTGAGACGGGCAGGCTATGCCTT
CAGGCAGGCCTATGAACCTTGCCTGGAAAGATACAAGATGCTTTGCAAACAAACGTGGCC
TCACTGGAAGGGACCAGCAAG
INTRON 18 - 19 51,774,406 51,776,203 1,798
GTAAGGGACTCTCTGGCTCGTGCAG..........ATTTGGAATGTGTTTACTCTTCTAG
19 EXON 19 51,774,312 51,774,405 2 0 94
GTCTGGCGTGGAGGTTCTGTTTAATGAGCTAGAGATTCCTGTGGAAGAGCACTCCTTCGG
GAGATCCAAGATATTCATCCGAAACCCACGGACA
INTRON 19 - 20 51,773,383 51,774,311 929
GTACGTACCTTTACACTCTGACCTT..........CTGTCTATTGTTTTTTTTTAATTAG
20 EXON 20 51,773,233 51,773,382 0 0 150
TTATTCCAACTAGAAGACCTAAGGAAGCAGCGGCTGGAGGACCTGGCCACTCTCATTCAG
AAGATTTATCGAGGATGGAAATGTCGTACACATTTTCTGCTCATGAAAAGAAGCCAAGTT
GTGATTGCTGCCTGGTACAGGAGATATGCG
INTRON 20 - 21 51,770,855 51,773,232 2,378
GTGAGTCTGTTGTTACAACCCGAGG..........TTCACAGCTCCCCTTTATTCTGCAG
21 EXON 21 51,770,786 51,770,854 0 0 69
CAACAAAAGCGGTACCAGCAGATAAAGAGTTCAGCCCTGGTGATTCAATCGTACATCCGG
GGCTGGAAG
INTRON 21 - 22 51,769,091 51,770,785 1,695
GTGAGTTTCAGTAAGTGTGCTTTCT..........CATGGGCATGATTTCTCTACCATAG
22 EXON 22 51,769,004 51,769,090 0 0 87
GCTCGAAAAATCCTGCGGGAGCTGAAGCATCAGAAGCGCTGTAAGGAGGCAGCCACCACC
ATCGCGGCGTACTGGCATGGCACCCAG
INTRON 22 - 23 51,763,965 51,769,003 5,039
GTAGACCAGAGGCCCTGAGGAGGGT..........ACCCTCGGTCTGCTTCCTTTTAAAG
23 EXON 23 51,763,890 51,763,964 0 0 75
GTACGCAGGGAATACAGGAAATTCTTTAGAGCAAATGCTGGAAAGAAAATCTATGAGTTT
ACACTTCAAAGAATT
INTRON 23 - 24 51,762,627 51,763,889 1,263
GTAAGTTGATACTATGTATATAGCT..........GTATTTTCTATCAACCCCAATACAG
24 EXON 24 51,762,492 51,762,626 0 0 135
GTGCAAAAATACTTGTTGGAAATGAAAAATAAAATGCCTTCCTTGTCACCGATAGATAAA
AATTGGCCATCAAGACCTTACCTGTTCTTGGATTCGACTCACAAGGAGCTAAAAAGGATC
TTCCACTTGTGGAGG
INTRON 24 - 25 51,760,402 51,762,491 2,090
GTAAACTATGCAATGGTTCGCTTTT..........TGTATGTTTTTCTTATATCTCACAG
25 EXON 25 51,760,295 51,760,401 0 2 107
TGTAAAAAATACAGGGATCAATTCACAGACCAGCAGAGACTTATTTATGAAGAGAAGCTC
GAGGCCAGCGAACTCTTCAAAGACAAGAAGGCTTTATATCCTTCTAG
INTRON 25 - 26 51,758,009 51,760,294 2,286
GTACGTATAGTTTTGCTTACTCAAA..........GTACAAGAATTTTTATTTCCTTTAG
26 EXON 26 51,757,876 51,758,008 2 0 133
TGTTGGGCAACCATTCCAAGGAGCTTACCTGGAAATCAACAAGAACCCAAAATATAAGAA
ACTCAAAGATGCCATTGAAGAGAAGATCATTATTGCTGAGGTTGTGAACAAAATTAATCG
GGCTAATGGGAAG
INTRON 26 - 27 51,757,258 51,757,875 618
GTAAAAATGCTAACACGCCTGTGAC..........TTTCTCTCTCTCTCTCTTGTTTCAG
27 EXON 27 51,757,105 51,757,257 0 0 153
AGTACATCTCGGATTTTCCTCTTAACAAACAATAACCTTCTCCTTGCTGACCAAAAGTCT
GGGCAGATCAAGTCCGAGGTCCCCCTGGTAGATGTGACCAAGGTTTCCATGAGTTCCCAG
AACGATGGTTTCTTTGCAGTGCACCTCAAGGAG
INTRON 27 - 28 51,755,771 51,757,104 1,334
GTAAGTGTCACCTGGTGACTTGACA..........ACCCTTGTCTTGCCTTTCTTTGCAG
28 EXON 28 51,755,643 51,755,770 0 2 128
GGTTCAGAAGCGGCTAGTAAAGGGGACTTTCTCTTCAGCAGTGACCACCTGATTGAAATG
GCAACCAAGCTGTATCGCACGACTCTCAGCCAAACTAAACAGAAGCTCAACATCGAGATT
TCTGATGA
INTRON 28 - 29 51,751,297 51,755,642 4,346
GTATGTCCTTGTATTGTGTAGTACA..........CTGAGTGTGTTTGGTTCTCTTCTAG
29 EXON 29 51,749,989 51,751,296 2 - 1,308
GTTCCTGGTACAGTTCAGACAAGACAAAGTATGTGTGAAGTTTATTCAAGGCAACCAGAA
AAATGGGAGCGTGCCAACCTGCAAACGAAAGAACAACAGACTCCTTGAAGTCGCTGTCCC
TTAAGTGAGGCTTCCTCTCTGCTCTCACGGACTTGTTTCCTCGTAACAGTGCAATTTTAC
TTTGTTTTATTTGGGGTTCACTGTATGTTTGGGAATTGCCAAAGGCTAACTGTTAGCGTC
CTCTTGGCACAATTAAAAGTATTTGACTAATGAGTTTTAATTATCAGAATAGTTCATTCC
TAAGTCCACATTCTGTCCTGGGCAGAATTATAGAAATTAACAGTGTCTGTTTCCATGGTT
TATGTGTTTTCTCCTTAGTTACCTAGACTTGTGTACCCTAAACCCACATATTACCCATAA
ATCACTAGTACATGTCAGCACAGGAGGGGAGCTTACAGTCAGTTATCAGATATTTATTGA
ATGCCTACTTTTTGCTGGGCCCTGTGCTGAACTTATTCGGAGATTTCTATTTTTAAAGCT
GTTGCCTTCTGGCTGATTTGTGCTGTCGAAGCAACAGCTAAGAAAGTTGAAGAGATTGGG
TCAAATGAGACTATAAATGACGGCCACTGGTAGGAACCCAGTAGTGTGGCGTAAACAGTA
CACTCACTGAGAAGTAGAGGTCCTGGGTGGATTGGAGATAGGTAATTGGGTAGAATTCTC
CTGAGAGGTTTGGAGATAGATGATTGGGTGGAATTCCTCTGTGTTTGTTTGTTTGTTTGT
TTTTCATAAATCTATTTGAAAAAGAGATAACCAACATTTAAACATACACATTTATTGGTT
CAGATCCATTTTCACTTTAGAAAAAGTCACTGAAGCAGGGCTGTAGAATGCTTTGTTCCT
GTTCCAGAGAAGCATGACATAGGACCCTGGATGTGCACAGTGTATCCACCCAGGGTCATT
AGCTTTTGAAACTGCATGATAAGAAGAGGCTGAGAGCCGTTCAGACTGGCAAATCTTCTC
TTTGATGTGCAATAAAACATCCAAGATCACTTTTGAAAGGTTTATTTATAATATGCATTT
TTTTTGTATGAGAGAGCTGATTGGTACAAGGTGTGTATTTTAGTCAGATCAAAATTAAGT
TAGAATTGGTTTTCAGGGCTTTTTGGTTTTTTTTCTTCAAAATTAACAATAAGGATTCAT
TTTGGAAACCACATTTTAAACTCTGGAATTAAATTGTTTCTTATTTGGGAGGATAATGTA
AATACATTGGGATTATGTTAATAATAAAATTGTTCTAATTTGGTGCCA
3' upstream sequence
TTTGCTGGATCACAACTGTATTTTTGTATCTCAAGCTATTTTCATATGTTAGTGTCAAAG
TGATGTGTCACAGAAAGGATTTCCATTCAGATATTATATGGTCTCTGTGTTAACAGATTT
CCACTGATCTTTTTGTACCACTATCAGTCAATGAAAAAGTTCTCTGGGGATTTTCTTTTG
ATTTTTGTACTTAAAAAGAAAAAAAAAAAGTTCTGATAAAGAAATTCTCCGAAGTCTTCG
TGTTTATTGGTACAGGAAATGGATATGATCATTTTTTACAGTTCCTAAAGTAGGTAAATT
CATAATTCCTGCTATAGGTAGATGGAAACTTCGGACTGATCACTGGTATTTTGAAAGCAT
ATACTTATAGTTAGCTAAATATACTTACAACAGTCAAAAAACCCTGGTCAGTACAAAAGG
CTACCAACTGTCCATCTGTCAAACCACCGTCTGTCTGCTGAGTTTCTGCCTCCAAAGGTT
AGCCTTCCGGTTGCTTCTGCATTGTATGGTGTGTTTGCTTCAGGGAGAGTGTAATTCTGT
CTTCCTCTCAGTTGACAAATGCCAAGCTCGTGTGCCCACAGACATGTTATTCTTGCCTTC
TAGCAGGGACACCACAGAGGACAAGCACTTCACAGTGGCTCAGTCCTTTCTTGTGAGGTG
CCCCATACTGCCTTCTCCAGCTTCCACTCATCATCACCGAGTTGTTTCTTGAGTAGAACC
CCAATTGCAGTGGGCCCAAAGTATGAGATGGCTTGGTAAATTTTCCCACTACACTTCCAG
ATTGTCCCCTGGGGTGCTTTGCAACAGTAGCATTCAGCAAAGGTAAACAGTTTCTATTTA
GTCCTAAACAACACTGTGAACAGGCTTAGAAGACCTTATTTACAGGGGAACTAGGGGGAT
ATTTTTCATATGCCTTCTGTTACATTGCTCTATCAAGTTCTTTTGGTCACAGAATTCACT
CTATATGAACTGTGCCTTTACGTGTTAGAAAACCCTTGCT..........

Sequence Detail Report

Gene Symbol (Gene ID) Myo1b (ENSMUSG00000018417)
Transcript ID ENSMUST00000114541
SNP Information
Strain :
Sequence Retrieve :
Exon translate :
CDS Start ( 1 ) - End ( 1085 )
-
Strand : forward reverse
Show sequence : nucleotide amino acid
Color information