MoG+ -Mouse Genome database with high added value-

Target CDS Information

Gene Symbol (Gene ID)

Auh (ENSMUSG00000021460)

Cross Reference

MGI_trans_name	Auh-004
OTTP	OTTMUSP00000032441
OTTT	OTTMUST00000065171
UCSC	uc007qne.1
UniParc	UPI00000E6591
Vega_transcript	Auh-004, OTTMUST00000065171
Vega_translation	214470, OTTMUSP00000032441

Definition

protein_id:ENSMUSP00000112427
translation:

MAAAAPGALGALRTVGVRLVAACCARLGPAAWARGTAPRRGYSSEVKTEDELRVRHLEEE
NRGIVVLGINRAYGKNALSKNLLKMLSKAVDALKSDKKVRTIIIRSEVPGIFCAGADLKE
RAKMHSSEVGPFVSKIRSVINDIV

Chromosome

Length
Position(start - end)

32,512
52,897,128 - 52,929,641

Orient to Chromosome

minus

Link

Location : (13:52897128-52929641)
/

Detail Map

name	Auh (ENSMUSG00000021460)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : Auh note : AU RNA binding protein/enoyl-coenzyme A hydratase [Source:MGI Symbol;Acc:MGI:1338011]

name	Auh (ENSMUSG00000021460)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000021913

name	Auh (ENSMUSG00000021460)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000137064

name	Auh (ENSMUSG00000021460)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000123599

name	Auh (ENSMUSG00000021460)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000120535

name	Auh (ENSMUSG00000021460)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000119311

name	Auh (ENSMUSG00000021460)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000110031

name	Auh (ENSMUSG00000021460) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS26518.1 RefSeq_peptide:NP_057918 RefSeq_mRNA:NM_016709.2 Vega_transcript:Auh-001 Vega_transcript:OTTMUST00000065168 UCSC:uc007qnd.1 GO:GO:0003730 GO:GO:0004300 GO:GO:0004490 MGI_trans_name:Auh-001 Vega_translation:214467 Vega_translation:OTTMUSP00000032438 OTTP:OTTMUSP00000032438 OTTT:OTTMUST00000065168 UniParc:UPI0000185E48
definition	note : transcript_id=ENSMUST00000021913 protein_id : ENSMUSP00000021913 translation : MAAAAPGALGALRTVGVRLVAACCARLGPAAWARGTAPRRGYSSEVKTEDELRVRHLEEENRGIVVLGINRAYGKNALSKNLLKMLSKAVDALKSDKKVRTIIIRSEVPGIFCAGADLKERAKMHSSEVGPFVSKIRSVINDIANLPVPTIAAIDGLALGGGLELALACDIRVAASSAKMGLVETKLAIIPGGGGTQRLPRAIGMSLAKELIFSARVLDGQEAKAVGLISHVLEQNQEGDAAYRKALDLAREFLPQGPVAMRVAKLAINQGMEVDLVTGLAIEEACYAQTISTKDRLEGLLAFKEKRPPRYKGE

name	Auh (ENSMUSG00000021460) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:Auh-006 Vega_transcript:OTTMUST00000065173 Uniprot/SPTREMBL:F6RT60 UCSC:uc007qnd.1 GO:GO:0000288 GO:GO:0003723 GO:GO:0003730 GO:GO:0004300 GO:GO:0004490 GO:GO:0005739 MGI_trans_name:Auh-006 Vega_translation:214471 Vega_translation:OTTMUSP00000032442 goslim_goa:GO:0003674 goslim_goa:GO:0003723 goslim_goa:GO:0003729 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005737 goslim_goa:GO:0005739 goslim_goa:GO:0008150 goslim_goa:GO:0009056 goslim_goa:GO:0016829 goslim_goa:GO:0034641 goslim_goa:GO:0034655 goslim_goa:GO:0043226 OTTP:OTTMUSP00000032442 OTTT:OTTMUST00000065173 UniParc:UPI0001611552
definition	codon_start : 2 note : transcript_id=ENSMUST00000137064 protein_id : ENSMUSP00000121852 translation : XKNALSKNLLKMLSKAVDALKSDKKVRTIIIRSEVPGIFCAGADLKERAKMHSSEVGPFVSKIRSVINDIANLPVPTIAAIDGLALGGGLELALACDIRVAASSAKMGLVETKLAIIPGGGGTQRLPRAIGMSLAKELIFSARVLDGQEAKAVGLISHVLEQNQEGDAAYRKALDLAREFLPQGPVAMRVAKLAINQGMEVDLVTGLAIEEACYAQVIHHLVHLCGRILHSEKKGGAVK

name	Auh (ENSMUSG00000021460) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:Auh-008 Vega_transcript:OTTMUST00000065175 Uniprot/SPTREMBL:F6R307 UCSC:uc007qnd.1 EMBL:AC140443 EMBL:AC160765 GO:GO:0000288 GO:GO:0003723 GO:GO:0003730 GO:GO:0004300 GO:GO:0004490 GO:GO:0005739 MGI_trans_name:Auh-008 Vega_translation:214472 Vega_translation:OTTMUSP00000032443 goslim_goa:GO:0003674 goslim_goa:GO:0003723 goslim_goa:GO:0003729 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005737 goslim_goa:GO:0005739 goslim_goa:GO:0008150 goslim_goa:GO:0009056 goslim_goa:GO:0016829 goslim_goa:GO:0034641 goslim_goa:GO:0034655 goslim_goa:GO:0043226 OTTP:OTTMUSP00000032443 OTTT:OTTMUST00000065175 UniParc:UPI0001611553
definition	note : transcript_id=ENSMUST00000123599 protein_id : ENSMUSP00000116179 translation : RGELQASAGEAAEVCPGCHCVPEGIVVLGINRAYGKNALSKNLLKMLSKAVDALKSDKKVRTIIIRSEVPGIFCAGADLKERAKMHSSEVGPFVSKIRSVINDIANLPVPTIAAIDGLALGGGLELALACDIRVAASSAKMGLVETKLAIIPGGGGTQRLPRAIGMSLAKELIFSARVLDGQEAKAVGLISHVLEQNQEGDAAYRKALDLAREFLPQVL

name	Auh (ENSMUSG00000021460) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:Auh-004 Vega_transcript:OTTMUST00000065171 UCSC:uc007qne.1 MGI_trans_name:Auh-004 Vega_translation:214470 Vega_translation:OTTMUSP00000032441 OTTP:OTTMUSP00000032441 OTTT:OTTMUST00000065171 UniParc:UPI00000E6591
definition	note : transcript_id=ENSMUST00000120535 protein_id : ENSMUSP00000112427 translation : MAAAAPGALGALRTVGVRLVAACCARLGPAAWARGTAPRRGYSSEVKTEDELRVRHLEEENRGIVVLGINRAYGKNALSKNLLKMLSKAVDALKSDKKVRTIIIRSEVPGIFCAGADLKERAKMHSSEVGPFVSKIRSVINDIV

name	Auh (ENSMUSG00000021460) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:Auh-003 Vega_transcript:OTTMUST00000065170 Uniprot/SPTREMBL:E9Q6L3 UCSC:uc007qnf.1 EMBL:AC140443 EMBL:AC160765 GO:GO:0000288 GO:GO:0003723 GO:GO:0003730 GO:GO:0004300 GO:GO:0004490 GO:GO:0005739 MGI_trans_name:Auh-003 Vega_translation:214469 Vega_translation:OTTMUSP00000032440 goslim_goa:GO:0003674 goslim_goa:GO:0003723 goslim_goa:GO:0003729 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005737 goslim_goa:GO:0005739 goslim_goa:GO:0008150 goslim_goa:GO:0009056 goslim_goa:GO:0016829 goslim_goa:GO:0034641 goslim_goa:GO:0034655 goslim_goa:GO:0043226 OTTP:OTTMUSP00000032440 OTTT:OTTMUST00000065170 UniParc:UPI0000354721
definition	note : transcript_id=ENSMUST00000119311 protein_id : ENSMUSP00000113659 translation : MAAAAPGALGALRTVGVRLVAACCARLGPAAWARGTAPRRGYSSEVKTEDELRVRHLEEENRGIVVLGINRAYGKNALSKNLLKMLSKAVDALKSDKKVRTIIIRSEVPGIFCAE

name	Auh (ENSMUSG00000021460) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	RefSeq_peptide_predicted:XP_006516909.1 Vega_transcript:Auh-002 Vega_transcript:OTTMUST00000065169 Uniprot/SPTREMBL:E9QMT1 UCSC:uc007qng.1 EMBL:AC140443 EMBL:AC160765 GO:GO:0000288 GO:GO:0003723 GO:GO:0003730 GO:GO:0004300 GO:GO:0004490 GO:GO:0005739 MGI_trans_name:Auh-002 Vega_translation:214468 Vega_translation:OTTMUSP00000032439 goslim_goa:GO:0003674 goslim_goa:GO:0003723 goslim_goa:GO:0003729 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005737 goslim_goa:GO:0005739 goslim_goa:GO:0008150 goslim_goa:GO:0009056 goslim_goa:GO:0016829 goslim_goa:GO:0034641 goslim_goa:GO:0034655 goslim_goa:GO:0043226 OTTP:OTTMUSP00000032439 OTTT:OTTMUST00000065169 UniParc:UPI0000434A46
definition	note : transcript_id=ENSMUST00000110031 protein_id : ENSMUSP00000105658 translation : MAAAAPGALGALRTVGVRLVAACCARLGPAAWARGTAPRRGYSSEVKTEDELRVRHLEEENRGIVVLGINRAYGKNALSKNLLKMLSKAVDALKSDKKVRTIIIRSEVPGIFCAVSFQLKADIQLCFQFAPFWWPLQSHSSQKPEVTPDSRCSPQIWA

name
type	STS
link
xref	UniSTS_NUM:162817 UniSTS:RH126105 UniSTS:C77140
definition	note : map_weight=1 standard_name : RH126105

name
type	misc_feature
link
xref
definition	note : contig AC140443.2 73088..180633(1)

name	Auh (ENSMUSG00000021460)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000065172 Vega_transcript:OTTMUST00000065172 MGI_trans_name:Auh-005 OTTT:OTTMUST00000065172
definition	note : retained_intron note : transcript_id=ENSMUST00000128380

name	Auh (ENSMUSG00000021460)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000065177 Vega_transcript:OTTMUST00000065177 MGI_trans_name:Auh-010 OTTT:OTTMUST00000065177
definition	note : processed_transcript note : transcript_id=ENSMUST00000132598

name	Auh (ENSMUSG00000021460)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000065178 Vega_transcript:OTTMUST00000065178 MGI_trans_name:Auh-011 OTTT:OTTMUST00000065178
definition	note : processed_transcript note : transcript_id=ENSMUST00000142515

name	Auh (ENSMUSG00000021460)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000065180 Vega_transcript:OTTMUST00000065180 MGI_trans_name:Auh-013 OTTT:OTTMUST00000065180
definition	note : processed_transcript note : transcript_id=ENSMUST00000128544

name	Auh (ENSMUSG00000021460)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000065176 Vega_transcript:OTTMUST00000065176 MGI_trans_name:Auh-009 OTTT:OTTMUST00000065176
definition	note : processed_transcript note : transcript_id=ENSMUST00000133906

name	Auh (ENSMUSG00000021460)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000065179 Vega_transcript:OTTMUST00000065179 MGI_trans_name:Auh-012 OTTT:OTTMUST00000065179
definition	note : retained_intron note : transcript_id=ENSMUST00000153329

name	Auh (ENSMUSG00000021460)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000065174 Vega_transcript:OTTMUST00000065174 MGI_trans_name:Auh-007 OTTT:OTTMUST00000065174
definition	note : processed_transcript note : transcript_id=ENSMUST00000151469

Polymorphisms Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Auh (ENSMUSG00000021460)
Transcript ID	ENSMUST00000120535

Reports
substitution
cSNPs	2
Insertion	15
Deletion	34
SNPs	+1kb 52929667(c.-26G>A), 52929674(c.-33C>T), 52929753(c.-112A>C), 52929768(c.-127T>C), 52929772(c.-131G>T), 52929775(c.-134G>A), 52929780(c.-139G>A), 52929788(c.-147T>A), 52929810(c.-169C>T), 52929957(c.-316A>G), 52929978(c.-337T>C), 52930064(c.-423G>T), 52930085(c.-444C>A), 52930240(c.-599T>C), 52930266(c.-625T>C), 52930372(c.-731C>T), 52930382(c.-741A>G), 52930394(c.-753C>G), 52930526(c.-885T>A), 52930561(c.-920C>T), 52930592(c.-951T>C), 52930728(c.-1087G>A), 52930746(c.-1105C>T), 52930815(c.-1174C>T), 52930938(c.-1297T>A), 52930949(c.-1308C>A), 52931012(c.-1371C>T), 52931148(c.-1507C>T), 52931233(c.-1592A>G), 52931335(c.-1694T>C), 52931400(c.-1759C>G), 52931548(c.-1907T>C), 52931608(c.-1967T>C), 52931698(c.-2057G>A), 52931716(c.-2075T>G), 52931747(c.-2106C>T), 52931782(c.-2141C>T), 52932379(c.-2738G>T), 52932433(c.-2792T>C), 52932782(c.-3141G>A), 52932824(c.-3183C>G), 52933031(c.-3390G>A), 52933190(c.-3549A>G), 52933424(c.-3783T>C), 52933497(c.-3856G>A), 52933503(c.-3862T>A), 52933929(c.-4288C>T), 52934510(c.-4869G>C), 5'UTR CDS 52929598(c.44T>G), 52929606(c.36G>A), 3'UTR 52896523(c.605A>G), 52896563(c.565C>T), 52896829(c.299A>C), 52896859(c.269C>T), INTRON 52897532(c.431-400T>C), 52897660(c.431-528T>C), 52897786(c.431-654A>C), 52897879(c.431-747G>A), 52897905(c.430+745G>T), 52898135(c.430+515G>A), 52898153(c.430+497G>A), 52898257(c.430+393G>T), 52898266(c.430+384C>T), 52898270(c.430+380C>T), 52898401(c.430+249T>C), 52898449(c.430+201C>A), 52898618(c.430+32C>T), 52899087(c.344-351A>G), 52899136(c.344-400T>A), 52899196(c.344-460G>A), 52899272(c.344-536G>A), 52899340(c.344-604T>C), 52899508(c.344-772G>A), 52899739(c.344-1003A>T), 52899745(c.344-1009T>C), 52899764(c.344-1028C>T), 52899771(c.344-1035T>C), 52899779(c.344-1043T>C), 52899936(c.344-1200G>C), 52899951(c.344-1215C>T), 52900094(c.344-1358A>G), 52900096(c.344-1360G>T), 52900101(c.344-1365C>A), 52900106(c.344-1370G>A), 52900109(c.344-1373C>T), 52900119(c.344-1383C>T), 52900146(c.344-1410T>C), 52900161(c.344-1425C>A), 52900166(c.344-1430T>G), 52900466(c.344-1730G>A), 52900637(c.344-1901C>T), 52900721(c.344-1985G>T), 52900739(c.344-2003A>G), 52901198(c.344-2462T>C), 52901229(c.344-2493G>A), 52901371(c.344-2635A>T), 52901571(c.344-2835C>G), 52901655(c.344-2919A>C), 52902069(c.344-3333C>T), 52903000(c.344-4264A>T), 52903223(c.344-4487T>G), 52903498(c.344-4762C>T), 52903506(c.344-4770T>C), 52903597(c.344-4861T>C), 52903626(c.344-4890G>A), 52903627(c.344-4891T>C), 52903844(c.344-5108T>C), 52903915(c.344-5179C>T), 52904036(c.344-5300T>C), 52904102(c.344-5366G>A), 52904174(c.344-5438T>C), 52904535(c.344-5799G>T), 52904583(c.344-5847T>G), 52904586(c.344-5850T>G), 52904589(c.344-5853T>G), 52904591(c.344-5855G>T), 52905566(c.344-6830T>C), 52905673(c.344-6937A>G), 52905882(c.344-7146A>G), 52905904(c.344-7168C>A), 52906189(c.344-7453C>G), 52906272(c.344-7536A>T), 52906604(c.344-7868C>T), 52906655(c.344-7919A>G), 52907005(c.344-8269A>G), 52907393(c.344-8657A>G), 52907905(c.344-9169G>A), 52908051(c.344-9315G>C), 52908597(c.344-9861A>G), 52908892(c.343+10109A>C), 52908893(c.343+10108T>C), 52909074(c.343+9927C>T), 52909481(c.343+9520G>C), 52909523(c.343+9478A>C), 52909701(c.343+9300A>G), 52910405(c.343+8596G>A), 52910587(c.343+8414A>G), 52910675(c.343+8326A>C), 52910730(c.343+8271G>T), 52910768(c.343+8233G>A), 52911460(c.343+7541C>T), 52912148(c.343+6853C>T), 52913603(c.343+5398A>G), 52913654(c.343+5347A>T), 52913656(c.343+5345A>T), 52913659(c.343+5342A>G), 52913807(c.343+5194G>A), 52913819(c.343+5182T>G), 52913829(c.343+5172C>T), 52913840(c.343+5161A>G), 52913971(c.343+5030T>C), 52913999(c.343+5002A>G), 52914099(c.343+4902A>G), 52915006(c.343+3995T>C), 52915031(c.343+3970C>A), 52915268(c.343+3733G>A), 52915293(c.343+3708T>C), 52915299(c.343+3702C>T), 52915341(c.343+3660G>C), 52915398(c.343+3603T>C), 52915405(c.343+3596A>T), 52915412(c.343+3589T>C), 52915509(c.343+3492C>G), 52915608(c.343+3393C>T), 52915753(c.343+3248G>A), 52915914(c.343+3087C>T), 52915985(c.343+3016C>T), 52915989(c.343+3012C>G), 52916188(c.343+2813A>C), 52916389(c.343+2612C>T), 52916999(c.343+2002G>A), 52917023(c.343+1978C>T), 52917041(c.343+1960T>C), 52917128(c.343+1873G>A), 52917141(c.343+1860G>A), 52917195(c.343+1806A>T), 52917280(c.343+1721C>A), 52917281(c.343+1720T>G), 52917448(c.343+1553G>A), 52917593(c.343+1408G>A), 52917616(c.343+1385C>T), 52918032(c.343+969C>T), 52918206(c.343+795G>T), 52918241(c.343+760G>A), 52918677(c.343+324T>C), 52918889(c.343+112G>T), 52918905(c.343+96A>G), 52919110(c.256-22T>C), 52919321(c.188-55C>T), 52919348(c.188-82G>A), 52919683(c.188-417T>C), 52919705(c.188-439A>G), 52919731(c.188-465C>T), 52920101(c.188-835G>A), 52920250(c.188-984G>A), 52920287(c.188-1021A>G), 52920312(c.188-1046A>C), 52920453(c.188-1187G>C), 52920768(c.188-1502C>T), 52920891(c.188-1625G>A), 52920916(c.188-1650C>A), 52920938(c.188-1672G>A), 52920969(c.188-1703C>T), 52921132(c.188-1866T>C), 52921226(c.188-1960G>A), 52921332(c.188-2066C>G), 52921351(c.188-2085T>C), 52921358(c.188-2092A>C), 52921444(c.188-2178T>C), 52921496(c.188-2230C>T), 52921735(c.188-2469G>A), 52921806(c.188-2540G>A), 52922370(c.188-3104T>G), 52922847(c.188-3581A>G), 52922945(c.188-3679T>A), 52923392(c.188-4126C>G), 52923394(c.188-4128G>C), 52923413(c.188-4147G>C), 52923450(c.188-4184A>G), 52923511(c.188-4245C>A), 52923782(c.188-4516T>C), 52923801(c.188-4535A>G), 52924124(c.188-4858T>C), 52924352(c.188-5086C>T), 52924506(c.187+4949G>A), 52924602(c.187+4853A>G), 52924732(c.187+4723A>G), 52924873(c.187+4582G>T), 52924946(c.187+4509T>C), 52925037(c.187+4418G>C), 52925224(c.187+4231T>C), 52925531(c.187+3924G>A), 52925542(c.187+3913C>T), 52925619(c.187+3836G>A), 52926092(c.187+3363A>G), 52926408(c.187+3047A>G), 52926586(c.187+2869A>C), 52926727(c.187+2728A>C), 52926842(c.187+2613C>A), 52926988(c.187+2467G>A), 52927144(c.187+2311T>C), 52927265(c.187+2190A>G), 52927347(c.187+2108G>A), 52928055(c.187+1400T>G), 52928136(c.187+1319A>G), 52928137(c.187+1318C>A), 52928141(c.187+1314C>T), 52928222(c.187+1233G>A), 52928379(c.187+1076G>A), 52928399(c.187+1056G>A), 52928414(c.187+1041G>A), 52928420(c.187+1035G>A), 52928422(c.187+1033A>T), 52928457(c.187+998C>T), 52928458(c.187+997G>A), 52928800(c.187+655T>C), 52929203(c.187+252C>T), 52929360(c.187+95T>A), -1kb 52891132(c.5996C>T), 52891340(c.5788A>G), 52891549(c.5579T>G), 52891777(c.5351C>T), 52892040(c.5088A>G), 52892068(c.5060T>C), 52892491(c.4637A>G), 52892492(c.4636C>T), 52892581(c.4547G>A), 52893161(c.3967G>A), 52893560(c.3568T>C), 52893582(c.3546G>T), 52893634(c.3494G>C), 52893650(c.3478C>T), 52893657(c.3471A>G), 52894112(c.3016A>G), 52894696(c.2432G>A), 52894918(c.2210G>A), 52894934(c.2194C>T), 52894946(c.2182C>A), 52894970(c.2158T>A), 52895004(c.2124A>G), 52895061(c.2067T>C), 52895065(c.2063C>T), 52895106(c.2022G>A), 52895142(c.1986T>C), 52895143(c.1985G>T), 52895144(c.1984T>C), 52895145(c.1983C>T), 52895151(c.1977C>T), 52895247(c.1881A>G), 52895313(c.1815T>C), 52895355(c.1773A>G), 52895369(c.1759C>T), 52895380(c.1748A>G), 52895430(c.1698T>G), 52895452(c.1676A>C), 52895533(c.1595G>A), 52895649(c.1479C>A), 52895650(c.1478T>C), 52895664(c.1464G>A), 52895903(c.1225G>C),
Insertions	+1kb 52930399 (c.-759_-758insGGA), 5'UTR CDS 3'UTR 52896634 (c.492_493dupCA), INTRON 52897424 (c.431-296_431-293dupAGAT), 52902657 (c.344-3924_344-3922dupTTT), 52903659 (c.344-4924_344-4923insT), 52903661 (c.344-4926_344-4925insAT), 52903885 (c.344-5150_344-5149insTCATA), 52912853 (c.343+6146_343+6147dupCA), 52914390 (c.343+4610dupT), 52915186 (c.343+3814_343+3815insCTC), 52921337 (c.188-2072_188-2071insT), 52922481 (c.188-3216_188-3215insCTGTTC), -1kb 52892684 (c.4443dupT), 52893528 (c.3599dupG), 52893530 (c.*3597dupG),
Deletions	+1kb 52930105 (c.-466_-465delTT), 52930348 (c.-710_-708delCCG), 52931197 (c.-1572_-1557delGCAGGGAGGCAGGGAT), 52932762 (c.-3122delC), 52933655 (c.-4015delA), 52933709 (c.-4070_-4069delTA), 52933718 (c.-4079_-4078delTT), 5'UTR CDS 3'UTR 52896055 (c.1067_1072delAGAGAG), 52896086 (c.1041delG), 52896093 (c.1034delG), INTRON 52897384 (c.431-255_431-253delGAT), 52897395 (c.431-264delA), 52899412 (c.344-682_344-677delGCGTGC), 52900394 (c.344-1664_344-1659delACAGCA), 52901315 (c.344-2582_344-2580delGAG), 52903647 (c.344-4914_344-4912delAGA), 52904484 (c.344-5751_344-5749delCCC), 52904496 (c.344-5764_344-5761delCACC), 52905864 (c.344-7131_344-7129delAAA), 52907030 (c.344-8297_344-8295delGCT), 52907113 (c.344-8379_344-8378delTT), 52907323 (c.344-8594_344-8588delACGTGTC), 52909858 (c.343+9139_343+9142delTTTA), 52913442 (c.343+5558delC), 52917300 (c.343+1695_343+1700delGTGGGG), 52920179 (c.188-920_188-914delTCTGGAC), 52920811 (c.188-1552_188-1546delCCCCCCC), 52922327 (c.188-3062delT), 52924489 (c.187+4960_187+4965delCATTGG), 52926991 (c.187+2456_187+2463delCCCTACCC), -1kb 52891281 (c.5844_5846delAAA), 52893265 (c.3862delA), 52893504 (c.3623delG), 52894497 (c.2627_2630delGCTT),
coding sequence substitutions
premature termination by the nucleotide substitution	0
synonymous num	1
non-synonymous num	1
synonymous substitutions	52929606 (p.Leu12Leu),
non-synonymous substitutions	52929598 (p.Val15Gly),
B6 transcript (ENSMUST00000120535)	MAAAAPGALGALRTVGVRLVAACCARLGPAAWARGTAPRRGYSSEVKTEDELRVRHLEEE NRGIVVLGINRAYGKNALSKNLLKMLSKAVDALKSDKKVRTIIIRSEVPGIFCAGADLKE RAKMHSSEVGPFVSKIRSVINDIV*
MSMv4 transcript	MAAAAPGALGALRTGGVRLVAACCARLGPAAWARGTAPRRGYSSEVKTEDELRVRHLEEE NRGIVVLGINRAYGKNALSKNLLKMLSKAVDALKSDKKVRTIIIRSEVPGIFCAGADLKE RAKMHSSEVGPFVSKIRSVINDIV*
homology	99.31 (145 / 145)

Exon Detail Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Auh (ENSMUSG00000021460)
Transcript ID	ENSMUST00000120535


..........GTCTGCCTGCTTGTTTGCGTGAGGGTGCCAGATCCTCTGGAACTTGATTT
ACAGACAACTCTGTGCTGCCATGCAGGTGTGGGGAATTGAATTTGGGGGTCCTCCGGAAG
AGCAGCAAGTGCTCTTAACCACTGAGCCATCTCTCTAGTCCTTATACCGGAATTTATATG
GCCAGAGTGTAATTTGCTTGTCTGGAAGGACAGGGAATACTCTAAGGAGACATTCTATCT
CTTCCTTTAGATTCAGACTAGGAAGGCTCGCTCCTCAGGGGACTGGAAAATCTCCACTCC
CAACCCCCCCCCCGCCCCCCCCCCCAGTGGAGAAGGAAAAGCTTAAATTTCTCACAGATA
GTGCTGGGTCAAAGATGAAAGGGACCACACATTAACCTGGGCCTGGCTATGCATGATTTT
GGCTCTCTACTTCAACTTGTGTGAGGCTTCTGTCTAAAGATAAGTTCCTCCTCTGACTGG
TCCTAAACTTCCCCATCTTCACCTGGGATTCAGGGAAGAGAGGAGGGAGTCCCCACTGTT
TTTTTTTTTTTTTTTTTCTTTTTGAGACAGGGTTTCTATGTCTCTGTCAGACCAGGCTTG
CCTCTGCCTCCCAAGTGCTGGGACTAAAGGTGTGTGCCACCACCGCCAGGTGGGAGTCCC
CACTGTTAAAGACCTTGTGGATTTCAACAATCTGATGATACACAGGGGAGGGGAACAAGG
GTCTGTCTTTCGAGTATCTTCCTTCCTTCCGGGATGGTCAGTCACAAGCCTACTATGGAC
CAAGTGCATGGAGGCAAGACCCTCTTGTCCTCTTCATTTAAGCGTTTCCACACTTTAAAG
ATGCCTCTCCTTTTCTGAGCTGGCAAAACATTAAAGCTACCCAGGCGACCTAGGCAAAGA
GTGCCTGGGCGGGGCCAGACAACGAGGGGCGGGGCCAAAGCGACCGACGCCTGTCGTGTG
CGTGCGCGGCTCCAAGCGGGGGGCGGAGTCTGGCCACGGGCGCCCGCTGT
AAACATACAACATGGCGGCGGCGGCTCCAGGCGCTCTGGGCGCCTTAAGAACGGGTGGCGTCCGCCTGGTGGCCGCGTGCTGCGCGCGGCTCGGCCCCGCGGCCTGGGCTAGGGGTACCGCCCCGAGGAGGGGCTACAGCTCGGAGGTGAAGACGGAGGATGAGTTGCGCGTGCGGCACCTGGAGGAGGAGAACCGAG
GTGAGCTGCAGGCAAGCGCGGGCGA..........GTCCTTCTTCTCCCTCCCTAACCAG
GCATTGTGGTGCTCGGGATTAACAGAGCTTATGGGAAAAATGCACTCAGTAAAAATCTCCTCAAGATG
GTGAGTGGAAGACTACGCTGTTTGC..........CCCCCTCCCCCCTATCTTGGTTTAG
TTATCAAAAGCGGTGGATGCATTAAAGTCAGATAAGAAAGTTCGGACCATTATCATCAGAAGTGAAGTCCCTGGGATATTCTGTGCTG
GTAGGTAAAATAATCTCCTGTTGTC..........CTCATCTGAATACGATGTCTTGTAG
GTGCTGACCTTAAGGAACGAGCCAAGATGCATTCCAGTGAAGTTGGTCCCTTTGTCTCCAAGATCCGATCGGTGATCAATGACATTG
GTAAGCACAGCTATGCTGAGGGTGG..........AAAATAAAGTCCTATGTTTACATAG
TGTAGTGAAGAAAGCCTCTGAGAGGTGTCAGCACGTCTTCATGGAAAGGCCGAGCGAACGGGAGTGGGAGGAGGCGCCTCCAGCCACAGCCAGTGCCTATCTCTTCATGGTGAACCTTTGAAGCTGTCTCCTGAGCCCAGAAGCAAGTCGGGAGAGGCCTGTGGCAGCCTCCCTCTGCATCTTTCTGGAGTCTACCCCCTGGAAAAGGAGGGGACAAAAACAAAGACGGAAAAGAACAAAGCAAAACACCAAGAGATCAGCTTGGTTAACTAGTAGAACATTGTGGTAAGATGGCAGGGCTTGCGACTTGTGTTCCAAATGGCAACCATAGGCCGAAGCCATCACAAAAAGATACTTTTGGCCCTGGAAGTAATAGTGTATCTAGGAGCACAGGAACCATGCAGAGGTGAAACAGCCTTGTAAGATAGGGGAGTGTGTATTCCCTTTAGGGTTCAGTTTCAAGAGGTGCTTCTCATGAATCTGTGTGAGGGACACACAGCCAGAGCCAGAGTCACCAACAGAAAGAGGACAAGAAGCCTTGCTGCAGCCACGGTGCAGGCTTTATTTAATGAGACACAACTAAAGCACTGGGCTGCTTGCCTAGGCCGTGCCTGTGGCCATGTCTGTCTGGCCCACAGGACATGTTGGGGAATGGGAAAGAAAAGATGAATAAGTTCTGTCAACATTAAATGAAGACCACCGGAGGATGTGTCTGTGAACACGCAGAGGCTTGACAGCTGAGCTGCAGCCTGGAAGCCCTCGGGAGGACTCTCCAGGAAGTAGATGCAAAGCCCACCCCCTAACTAAGAAGCTGTTCACTGTCGATACCTGATGGGAAAGAAGAAATCAGTTTCCTATAGCAGAGTGTCACTGGGCACACCGGACACACACCAGGGCAGGCCCCATGCCCAGGAACAGCTGGCCAACACAAAATGAACTTAATGGTTGGTCAGTCGGTGAGTTGGTCTATCTGTCTGTCTATCATTTTTATGTGAACTTTTTGTTTTGTTTTGCATCTTTTGACTTACTGGGTCTTTTGGGGGGGGTGCTGAAGGAGGGAGGGAATGGGTTAGAGAGAGAGAGAGAGAGAGAGAGAATGAAATTGGGTGGATAGGGAGGTGGGCAAGATCTAGGAATTGATGGGCAGGAAAACATAATCAAAATGTATTGTGTGAAAAAAAGAATTTAAATAAAAAAAAGTCCCTC
ACACTCTTGGGTAGTGGTGTTTACTCTTTCTGATGCAGCGACCCTTTAACACAGTTCCTC
ATGTCGTGGTGACTTCAACCATAAAATTATTTTTGTTGCTACTTTGTAACTGTAATTTTG
CTGTTGTTATGAATGATAAGTATCTGAGTTTTGTGACCTTTGGTGACCCCTGTGTAAGGG
TCATGGCCCACAGGTTGAGAATTACTGCTTTACTGACTGGGCTTAGGCTCCTTAGTAGTC
ACTTGCAGCTTGTCTCAGTCTCAGTGGGAGGTTGTACACCCCAGATCCCACCCAGACATT
GAAGCCTGAGGAGCATTATAAAATGATAGCCCTCCCTGACAGGATGGCTCTGTAGGCAGA
GGTTTGGAGTTCAGTAGCCCACATCCACATGGTAGAACAAGAGAATCGACTCTGGCAGGT
TGTCCTCTGACCTCCACATAGACACCCTCCTCACGTGCATGCGCATGCGCGGACCCCCTG
AGTAAGTCAGTGTAAGGAAACCCATTGTGTGGCTTTGCATTTTGTGGATGAACGATCAGA
GAGGTTGCTTGGAAAGATTCCTCTCACAGATGCCTCTGTAGAGCGTAGCACTGTCCTACA
TCTTGGTCTCTGTCACGAGGGTCAGCATCTCTGGTATGACATCAGAAGGAAGGAGGAACG
TGACTGAGTTTTAAGTGCTGTTATTTATACACTTAGCCGTTAGGTTCATCCTATCACCAT
ACGGTGTTAAGAACACGGCTGCTGTCTCTCTCACTGGTGCAGCCTACAGGAGCTCTGTCT
CTCTCACTGGTGCAGCAGAGTAGCTGCCATTCTTGTTGCCATTCAGATCTACCCCACCAT
GTAGGTGTCTGACTTTTGTCCTTCTCTATTCAAAACCTCGGCCGGTTAGTGCCACAGCGA
TGTTGCCATGCAGGCAGAAGCCGAGTGCTCCTGTGTTTCCGTGCGAACTTGTTGCCACCT
GATAATTTGGCTTTTGCTTTAACCACATTGTGTTGAGAGC..........

No.	Exon / Intron	Start	End	Start Phase	End Phase	Length	Sequence
	5' upstream sequence						..........GTCTGCCTGCTTGTTTGCGTGAGGGTGCCAGATCCTCTGGAACTTGATTT ACAGACAACTCTGTGCTGCCATGCAGGTGTGGGGAATTGAATTTGGGGGTCCTCCGGAAG AGCAGCAAGTGCTCTTAACCACTGAGCCATCTCTCTAGTCCTTATACCGGAATTTATATG GCCAGAGTGTAATTTGCTTGTCTGGAAGGACAGGGAATACTCTAAGGAGACATTCTATCT CTTCCTTTAGATTCAGACTAGGAAGGCTCGCTCCTCAGGGGACTGGAAAATCTCCACTCC CAACCCCCCCCCCGCCCCCCCCCCCAGTGGAGAAGGAAAAGCTTAAATTTCTCACAGATA GTGCTGGGTCAAAGATGAAAGGGACCACACATTAACCTGGGCCTGGCTATGCATGATTTT GGCTCTCTACTTCAACTTGTGTGAGGCTTCTGTCTAAAGATAAGTTCCTCCTCTGACTGG TCCTAAACTTCCCCATCTTCACCTGGGATTCAGGGAAGAGAGGAGGGAGTCCCCACTGTT TTTTTTTTTTTTTTTTTCTTTTTGAGACAGGGTTTCTATGTCTCTGTCAGACCAGGCTTG CCTCTGCCTCCCAAGTGCTGGGACTAAAGGTGTGTGCCACCACCGCCAGGTGGGAGTCCC CACTGTTAAAGACCTTGTGGATTTCAACAATCTGATGATACACAGGGGAGGGGAACAAGG GTCTGTCTTTCGAGTATCTTCCTTCCTTCCGGGATGGTCAGTCACAAGCCTACTATGGAC CAAGTGCATGGAGGCAAGACCCTCTTGTCCTCTTCATTTAAGCGTTTCCACACTTTAAAG ATGCCTCTCCTTTTCTGAGCTGGCAAAACATTAAAGCTACCCAGGCGACCTAGGCAAAGA GTGCCTGGGCGGGGCCAGACAACGAGGGGCGGGGCCAAAGCGACCGACGCCTGTCGTGTG CGTGCGCGGCTCCAAGCGGGGGGCGGAGTCTGGCCACGGGCGCCCGCTGT
1	EXON 1	52,929,455	52,929,652	-	1	198	AAACATACAACATGGCGGCGGCGGCTCCAGGCGCTCTGGGCGCCTTAAGAACGGGTGGCG TCCGCCTGGTGGCCGCGTGCTGCGCGCGGCTCGGCCCCGCGGCCTGGGCTAGGGGTACCG CCCCGAGGAGGGGCTACAGCTCGGAGGTGAAGACGGAGGATGAGTTGCGCGTGCGGCACC TGGAGGAGGAGAACCGAG
	INTRON 1 - 2	52,919,267	52,929,454			10,188	GTGAGCTGCAGGCAAGCGCGGGCGA..........GTCCTTCTTCTCCCTCCCTAACCAG
2	EXON 2	52,919,199	52,919,266	1	0	68	GCATTGTGGTGCTCGGGATTAACAGAGCTTATGGGAAAAATGCACTCAGTAAAAATCTCC TCAAGATG
	INTRON 2 - 3	52,919,089	52,919,198			110	GTGAGTGGAAGACTACGCTGTTTGC..........CCCCCTCCCCCCTATCTTGGTTTAG
3	EXON 3	52,919,001	52,919,088	0	1	88	TTATCAAAAGCGGTGGATGCATTAAAGTCAGATAAGAAAGTTCGGACCATTATCATCAGA AGTGAAGTCCCTGGGATATTCTGTGCTG
	INTRON 3 - 4	52,898,737	52,919,000			20,264	GTAGGTAAAATAATCTCCTGTTGTC..........CTCATCTGAATACGATGTCTTGTAG
4	EXON 4	52,898,650	52,898,736	1	1	87	GTGCTGACCTTAAGGAACGAGCCAAGATGCATTCCAGTGAAGTTGGTCCCTTTGTCTCCA AGATCCGATCGGTGATCAATGACATTG
	INTRON 4 - 5	52,897,133	52,898,649			1,517	GTAAGCACAGCTATGCTGAGGGTGG..........AAAATAAAGTCCTATGTTTACATAG
5	EXON 5	52,895,927	52,897,132	1	-	1,206	TGTAGTGAAGAAAGCCTCTGAGAGGTGTCAGCACGTCTTCATGGAAAGGCCGAGCGAACG GGAGTGGGAGGAGGCGCCTCCAGCCACAGCCAGTGCCTATCTCTTCATGGTGAACCTTTG AAGCTGTCTCCTGAGCCCAGAAGCAAGTCGGGAGAGGCCTGTGGCAGCCTCCCTCTGCAT CTTTCTGGAGTCTACCCCCTGGAAAAGGAGGGGACAAAAACAAAGACGGAAAAGAACAAA GCAAAACACCAAGAGATCAGCTTGGTTAACTAGTAGAACATTGTGGTAAGATGGCAGGGC TTGCGACTTGTGTTCCAAATGGCAACCATAGGCCGAAGCCATCACAAAAAGATACTTTTG GCCCTGGAAGTAATAGTGTATCTAGGAGCACAGGAACCATGCAGAGGTGAAACAGCCTTG TAAGATAGGGGAGTGTGTATTCCCTTTAGGGTTCAGTTTCAAGAGGTGCTTCTCATGAAT CTGTGTGAGGGACACACAGCCAGAGCCAGAGTCACCAACAGAAAGAGGACAAGAAGCCTT GCTGCAGCCACGGTGCAGGCTTTATTTAATGAGACACAACTAAAGCACTGGGCTGCTTGC CTAGGCCGTGCCTGTGGCCATGTCTGTCTGGCCCACAGGACATGTTGGGGAATGGGAAAG AAAAGATGAATAAGTTCTGTCAACATTAAATGAAGACCACCGGAGGATGTGTCTGTGAAC ACGCAGAGGCTTGACAGCTGAGCTGCAGCCTGGAAGCCCTCGGGAGGACTCTCCAGGAAG TAGATGCAAAGCCCACCCCCTAACTAAGAAGCTGTTCACTGTCGATACCTGATGGGAAAG AAGAAATCAGTTTCCTATAGCAGAGTGTCACTGGGCACACCGGACACACACCAGGGCAGG CCCCATGCCCAGGAACAGCTGGCCAACACAAAATGAACTTAATGGTTGGTCAGTCGGTGA GTTGGTCTATCTGTCTGTCTATCATTTTTATGTGAACTTTTTGTTTTGTTTTGCATCTTT TGACTTACTGGGTCTTTTGGGGGGGGTGCTGAAGGAGGGAGGGAATGGGTTAGAGAGAGA GAGAGAGAGAGAGAGAATGAAATTGGGTGGATAGGGAGGTGGGCAAGATCTAGGAATTGA TGGGCAGGAAAACATAATCAAAATGTATTGTGTGAAAAAAAGAATTTAAATAAAAAAAAG TCCCTC
	3' upstream sequence						ACACTCTTGGGTAGTGGTGTTTACTCTTTCTGATGCAGCGACCCTTTAACACAGTTCCTC ATGTCGTGGTGACTTCAACCATAAAATTATTTTTGTTGCTACTTTGTAACTGTAATTTTG CTGTTGTTATGAATGATAAGTATCTGAGTTTTGTGACCTTTGGTGACCCCTGTGTAAGGG TCATGGCCCACAGGTTGAGAATTACTGCTTTACTGACTGGGCTTAGGCTCCTTAGTAGTC ACTTGCAGCTTGTCTCAGTCTCAGTGGGAGGTTGTACACCCCAGATCCCACCCAGACATT GAAGCCTGAGGAGCATTATAAAATGATAGCCCTCCCTGACAGGATGGCTCTGTAGGCAGA GGTTTGGAGTTCAGTAGCCCACATCCACATGGTAGAACAAGAGAATCGACTCTGGCAGGT TGTCCTCTGACCTCCACATAGACACCCTCCTCACGTGCATGCGCATGCGCGGACCCCCTG AGTAAGTCAGTGTAAGGAAACCCATTGTGTGGCTTTGCATTTTGTGGATGAACGATCAGA GAGGTTGCTTGGAAAGATTCCTCTCACAGATGCCTCTGTAGAGCGTAGCACTGTCCTACA TCTTGGTCTCTGTCACGAGGGTCAGCATCTCTGGTATGACATCAGAAGGAAGGAGGAACG TGACTGAGTTTTAAGTGCTGTTATTTATACACTTAGCCGTTAGGTTCATCCTATCACCAT ACGGTGTTAAGAACACGGCTGCTGTCTCTCTCACTGGTGCAGCCTACAGGAGCTCTGTCT CTCTCACTGGTGCAGCAGAGTAGCTGCCATTCTTGTTGCCATTCAGATCTACCCCACCAT GTAGGTGTCTGACTTTTGTCCTTCTCTATTCAAAACCTCGGCCGGTTAGTGCCACAGCGA TGTTGCCATGCAGGCAGAAGCCGAGTGCTCCTGTGTTTCCGTGCGAACTTGTTGCCACCT GATAATTTGGCTTTTGCTTTAACCACATTGTGTTGAGAGC..........

Sequence Detail Report

Gene Symbol (Gene ID)	Auh (ENSMUSG00000021460)
Transcript ID	ENSMUST00000120535

		SNP Information
Strain :
Sequence Retrieve :
Exon translate : CDS Start ( 1 ) - End ( 145 ) -
Strand :	forward reverse
Show sequence :	nucleotide amino acid
Color information