MoG+ -Mouse Genome database with high added value-

Target CDS Information

Gene Symbol (Gene ID)

Lman2l (ENSMUSG00000001143)

Cross Reference

EMBL	AC084391, AC132456
GO	GO:0003674, GO:0005789, GO:0005794, ...show all
goslim_goa	GO:0003674, GO:0005575, GO:0005622, ...show all
MGI_trans_name	Lman2l-006
OTTP	OTTMUSP00000062561
OTTT	OTTMUST00000051152
UniParc	UPI000268B57B
Uniprot/SPTREMBL	J3QPK9
Vega_transcript	Lman2l-006, OTTMUST00000051152
Vega_translation	178971, OTTMUSP00000062561

Definition

protein_id:ENSMUSP00000137344
translation:

MAAASRPSWWQRWRRRAWARDGAKLLLFLLLLGSGPGPRHVRAGQAVEYLKREHSLSKPY
QGFLCVALAVLELTL

Chromosome

Length
Position(start - end)

1,133
36,444,099 - 36,445,233

Orient to Chromosome

minus

Link

Location : (1:36444099-36445233)
/

Detail Map

name	Lman2l (ENSMUSG00000001143)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : Lman2l note : lectin, mannose-binding 2-like [Source:MGI Symbol;Acc:MGI:2443010]

name	Lman2l (ENSMUSG00000001143)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000192969

name	Lman2l (ENSMUSG00000001143)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000125304

name	Lman2l (ENSMUSG00000001143)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000115011

name	Lman2l (ENSMUSG00000001143)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000001171

name	Lman2l (ENSMUSG00000001143)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000152088

name	Lman2l (ENSMUSG00000001143)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000123583

name	Lman2l (ENSMUSG00000001143) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:Lman2l-008 Vega_transcript:OTTMUST00000127607 Uniprot/SPTREMBL:A0A0A6YX25 UCSC:uc007aqd.1 GO:GO:0003674 GO:GO:0005789 GO:GO:0005794 GO:GO:0015031 MGI_trans_name:Lman2l-008 Vega_translation:178966 Vega_translation:OTTMUSP00000068811 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005737 goslim_goa:GO:0005783 goslim_goa:GO:0005794 goslim_goa:GO:0006810 goslim_goa:GO:0008150 goslim_goa:GO:0043226 OTTP:OTTMUSP00000068811 OTTT:OTTMUST00000127607 UniParc:UPI00053BD6A2
definition	codon_start : 3 note : transcript_id=ENSMUST00000192969 protein_id : ENSMUSP00000141806 translation : XKNLHGDGLAIWYTKDRMQPGPVFGNMDKFVGLGVFVDTYPNEEKQHERVFPYISAMVNNGSLSYDHERDGRPTELGGCTAIVRNIRYDTFLVIRYVKRHLTIMMDIDGKHEWRDCIEMPGVRLPRGYYFGTSSITGDLSDNHDVISLKLFELTGVRTPEEEKLHRDVFLPSVDNLKLPESLLDQVHFSCAPDDTTQLVPAATVL

name	Lman2l (ENSMUSG00000001143) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS14878.1 Uniprot/SWISSPROT:P59481 RefSeq_peptide:NP_001013392 RefSeq_mRNA:NM_001013374.1 Vega_transcript:Lman2l-001 Vega_transcript:OTTMUST00000051147 UCSC:uc007aqd.1 Fantom:F930016M20 EMBL:AK158015 EMBL:BC046969 GO:GO:0000139 GO:GO:0003674 GO:GO:0005789 GO:GO:0005789 GO:GO:0005794 GO:GO:0005794 GO:GO:0015031 GO:GO:0015031 GO:GO:0016021 GO:GO:0030246 GO:GO:0046872 MGI_trans_name:Lman2l-001 Vega_translation:178967 Vega_translation:OTTMUSP00000024024 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005737 goslim_goa:GO:0005783 goslim_goa:GO:0005794 goslim_goa:GO:0006810 goslim_goa:GO:0008150 goslim_goa:GO:0043167 goslim_goa:GO:0043226 protein_id:AAH46969.1 protein_id:BAE34318.1 OTTP:OTTMUSP00000024024 OTTT:OTTMUST00000051147 UniParc:UPI000000BB48
definition	note : transcript_id=ENSMUST00000125304 protein_id : ENSMUSP00000117200 translation : MAAASRPSWWQRWRRRAWARDGAKLLLFLLLLGSGPGPRHVRAGQAVEYLKREHSLSKPYQGVGTSSSSLWNLMGNAMVMTQYIRLTPDMQSKQGALWNRVPCFLKDWELQVHFKIHGQGKKNLHGDGLAIWYTKDRMQPGPVFGNMDKFVGLGVFVDTYPNEEKQHERVFPYISAMVNNGSLSYDHERDGRPTELGGCTAIVRNIRYDTFLVIRYVKRHLTIMMDIDGKHEWRDCIEMPGVRLPRGYYFGTSSITGDLSDNHDVISLKLFELTGVRTPEEEKLHRDVFLPSVDNLKLPEMTVPPTPLSGLALFLIVFFSLVFSVFAIVIGIILYNKWQDQSRKRFY

name	Lman2l (ENSMUSG00000001143) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	RefSeq_peptide:NP_001297446.1 RefSeq_mRNA:NM_001310517.1 Vega_transcript:Lman2l-002 Vega_transcript:OTTMUST00000051148 Uniprot/SPTREMBL:D3Z4P2 UCSC:uc007aqd.1 EMBL:AC084391 EMBL:AC132456 EMBL:CH466536 GO:GO:0003674 GO:GO:0005789 GO:GO:0005794 GO:GO:0015031 MGI_trans_name:Lman2l-002 Vega_translation:178968 Vega_translation:OTTMUSP00000024025 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005737 goslim_goa:GO:0005783 goslim_goa:GO:0005794 goslim_goa:GO:0006810 goslim_goa:GO:0008150 goslim_goa:GO:0043226 protein_id:EDL14483.1 OTTP:OTTMUSP00000024025 OTTT:OTTMUST00000051148 UniParc:UPI00001E2FFA
definition	note : transcript_id=ENSMUST00000115011 protein_id : ENSMUSP00000110663 translation : MAAASRPSWWQRWRRRAWARDGAKLLLFLLLLGSGPGPRHVRAGQAVEYLKREHSLSKPYQGVGTSSSSLWNLMGNAMVMTQYIRLTPDMQSKQGALWNRVPCFLKDWELQVHFKIHGQGKKNLHGDGLAIWYTKDRMQPGPVFGNMDKFVGLGVFVDTYPNEEKQHEAQKRRYSPGVQRVFPYISAMVNNGSLSYDHERDGRPTELGGCTAIVRNIRYDTFLVIRYVKRHLTIMMDIDGKHEWRDCIEMPGVRLPRGYYFGTSSITGDLSDNHDVISLKLFELTGVRTPEEEKLHRDVFLPSVDNLKLPEMTVPPTPLSGLALFLIVFFSLVFSVFAIVIGIILYNKWQDQSRKRFY

name	Lman2l (ENSMUSG00000001143) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:Lman2l-003 Vega_transcript:OTTMUST00000051149 Uniprot/SPTREMBL:J3QNZ7 UCSC:uc007aqd.1 EMBL:AC084391 EMBL:AC132456 GO:GO:0003674 GO:GO:0005789 GO:GO:0005794 GO:GO:0015031 MGI_trans_name:Lman2l-003 Vega_translation:178969 Vega_translation:OTTMUSP00000062560 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005737 goslim_goa:GO:0005783 goslim_goa:GO:0005794 goslim_goa:GO:0006810 goslim_goa:GO:0008150 goslim_goa:GO:0043226 OTTP:OTTMUSP00000062560 OTTT:OTTMUST00000051149 UniParc:UPI000268B57A
definition	note : transcript_id=ENSMUST00000001171 protein_id : ENSMUSP00000137028 translation : MAAASRPSWWQRWRRRAWARDGAKLLLFLLLLGSGPGPRHVRAGQAVEYLKREHSLSKPYQGVGTSSSSLWNLMGNAMVMTQYIRLTPDMQSKQGALWNRVPCFLKDWELQVHFKIHGQGKKNLHGDGLAIWYTKDRMQPAGIPLHLSHGEQRLPQL

name	Lman2l (ENSMUSG00000001143) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:Lman2l-005 Vega_transcript:OTTMUST00000051151 Uniprot/SPTREMBL:F6QN75 GO:GO:0003674 GO:GO:0005789 GO:GO:0005794 GO:GO:0015031 MGI_trans_name:Lman2l-005 Vega_translation:178970 Vega_translation:OTTMUSP00000024026 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005737 goslim_goa:GO:0005783 goslim_goa:GO:0005794 goslim_goa:GO:0006810 goslim_goa:GO:0008150 goslim_goa:GO:0043226 OTTP:OTTMUSP00000024026 OTTT:OTTMUST00000051151 UniParc:UPI0000F22054
definition	codon_start : 2 note : transcript_id=ENSMUST00000152088 protein_id : ENSMUSP00000119798 translation : XAIVRNIRYDTFLVIRYVKRHLTIMMDIDGKHEWRDCIEMPGVRLPRGYYFGTSSITGDLSDNHDVISLKLFELTGVRTPEEEKLHRDVFLPSVDNLKLPESECGILRNGPCLERRLQCPWSLG

name	Lman2l (ENSMUSG00000001143) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:Lman2l-006 Vega_transcript:OTTMUST00000051152 Uniprot/SPTREMBL:J3QPK9 EMBL:AC084391 EMBL:AC132456 GO:GO:0003674 GO:GO:0005789 GO:GO:0005794 GO:GO:0015031 MGI_trans_name:Lman2l-006 Vega_translation:178971 Vega_translation:OTTMUSP00000062561 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005737 goslim_goa:GO:0005783 goslim_goa:GO:0005794 goslim_goa:GO:0006810 goslim_goa:GO:0008150 goslim_goa:GO:0043226 OTTP:OTTMUSP00000062561 OTTT:OTTMUST00000051152 UniParc:UPI000268B57B
definition	note : transcript_id=ENSMUST00000123583 protein_id : ENSMUSP00000137344 translation : MAAASRPSWWQRWRRRAWARDGAKLLLFLLLLGSGPGPRHVRAGQAVEYLKREHSLSKPYQGFLCVALAVLELTL

name
type	STS
link
xref	UniSTS_NUM:163045 UniSTS:C78282 UniSTS:RH126337
definition	note : map_weight=1 standard_name : RH126337

name
type	misc_feature
link
xref
definition	note : contig AC132456.5 1..167110(-1)

name
type	misc_feature
link
xref
definition	note : contig AC084391.1 1..158328(-1)

name	Lman2l (ENSMUSG00000001143)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000051150 Vega_transcript:OTTMUST00000051150 MGI_trans_name:Lman2l-004 OTTT:OTTMUST00000051150
definition	note : retained_intron note : transcript_id=ENSMUST00000134594

name	Lman2l (ENSMUSG00000001143)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000127134 Vega_transcript:OTTMUST00000127134 MGI_trans_name:Lman2l-007 OTTT:OTTMUST00000127134
definition	note : retained_intron note : transcript_id=ENSMUST00000193502

Polymorphisms Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Lman2l (ENSMUSG00000001143)
Transcript ID	ENSMUST00000123583

Reports
substitution
cSNPs	1
Insertion	9
Deletion	21
SNPs	+1kb 36446224(c.-991A>G), 36446344(c.-1111C>G), 36446349(c.-1116G>C), 36446398(c.-1165G>C), 36446401(c.-1168A>G), 36446407(c.-1174A>G), 36446643(c.-1410C>A), 36446796(c.-1563A>T), 36446814(c.-1581C>T), 36446860(c.-1627G>A), 36446956(c.-1723A>G), 36446983(c.-1750A>T), 36447024(c.-1791G>A), 36447450(c.-2217A>G), 36447592(c.-2359A>C), 36447805(c.-2572C>T), 36447868(c.-2635T>C), 36448100(c.-2867G>A), 36448255(c.-3022C>T), 36448399(c.-3166G>A), 36448400(c.-3167T>C), 36448663(c.-3430C>T), 36448793(c.-3560G>A), 36448913(c.-3680T>C), 36448967(c.-3734C>T), 36449074(c.-3841G>A), 36449157(c.-3924C>G), 36449169(c.-3936C>G), 36449185(c.-3952T>C), 36449245(c.-4012C>A), 36449448(c.-4215C>A), 36449472(c.-4239G>A), 36449543(c.-4310C>T), 36449581(c.-4348G>A), 36449633(c.-4400A>T), 36449634(c.-4401C>T), 36449687(c.-4454G>A), 36449721(c.-4488A>G), 36449803(c.-4570A>G), 36449873(c.-4640G>C), 36449960(c.-4727A>G), 36449963(c.-4730A>C), 36449969(c.-4736T>C), 36449975(c.-4742C>T), 36450046(c.-4813G>A), 36450067(c.-4834C>T), 36450181(c.-4948A>G), 36450236(c.-5003A>G), 5'UTR 36428426(c.389C>T), 36443551(c.121A>G), CDS 36445187(c.47G>A), 3'UTR INTRON 36429552(c.354-1091G>A), 36430232(c.354-1771G>A), 36430239(c.354-1778A>G), 36430555(c.354-2094A>G), 36431575(c.354-3114T>C), 36432531(c.354-4070T>C), 36432717(c.354-4256G>C), 36432719(c.354-4258A>C), 36432791(c.354-4330C>T), 36432793(c.354-4332G>A), 36432896(c.354-4435T>C), 36432910(c.354-4449T>C), 36432945(c.354-4484G>A), 36433056(c.354-4595A>G), 36433083(c.354-4622A>G), 36433249(c.354-4788T>G), 36433599(c.354-5138C>T), 36433766(c.353+4984T>C), 36433908(c.353+4842T>C), 36434235(c.353+4515T>C), 36434250(c.353+4500T>C), 36434276(c.353+4474G>T), 36434289(c.353+4461G>A), 36434297(c.353+4453A>G), 36434335(c.353+4415A>G), 36434337(c.353+4413A>G), 36434691(c.353+4059G>T), 36434934(c.353+3816C>T), 36435064(c.353+3686A>G), 36435071(c.353+3679T>C), 36435087(c.353+3663C>T), 36435140(c.353+3610T>A), 36435253(c.353+3497C>T), 36435396(c.353+3354G>T), 36435697(c.353+3053G>A), 36435782(c.353+2968T>C), 36435803(c.353+2947G>A), 36436006(c.353+2744A>G), 36436059(c.353+2691A>G), 36436106(c.353+2644A>G), 36436166(c.353+2584T>A), 36436297(c.353+2453A>T), 36436471(c.353+2279T>C), 36436572(c.353+2178A>C), 36436630(c.353+2120G>A), 36436798(c.353+1952C>T), 36436856(c.353+1894A>G), 36436861(c.353+1889C>G), 36437086(c.353+1664C>T), 36437281(c.353+1469G>A), 36437291(c.353+1459G>A), 36437367(c.353+1383G>A), 36437565(c.353+1185G>A), 36437566(c.353+1184A>G), 36437863(c.353+887A>G), 36437880(c.353+870C>T), 36437900(c.353+850A>G), 36437968(c.353+782G>A), 36437996(c.353+754G>C), 36438004(c.353+746T>C), 36438194(c.353+556G>A), 36438417(c.353+333C>T), 36438493(c.353+257T>A), 36438681(c.353+69G>A), 36438684(c.353+66G>C), 36438704(c.353+46T>C), 36438717(c.353+33T>C), 36438840(c.271-8C>T), 36439089(c.271-257A>G), 36439540(c.270+69G>A), 36439749(c.153-23C>T), 36439902(c.153-176A>G), 36439950(c.153-224A>G), 36440083(c.153-357A>G), 36440463(c.153-737T>A), 36440729(c.153-1003G>C), 36441088(c.153-1362T>G), 36441101(c.153-1375T>C), 36441159(c.153-1433T>A), 36441190(c.153-1464G>C), 36441218(c.153-1492C>T), 36443457(c.152+63C>T), 36443750(c.63-141A>C), 36443839(c.62+198A>C), 36443863(c.62+174A>C), 36443929(c.62+108T>A), 36443987(c.62+50T>C), 36444340(c.185-198T>C), 36444375(c.185-233A>G), 36444415(c.185-273C>A), 36444648(c.184+402G>A), 36444660(c.184+390G>A), -1kb 36423672(c.20427T>C), 36423994(c.20105G>A), 36424072(c.20027T>C), 36424181(c.19918G>A), 36424562(c.19537C>A), 36424701(c.19398T>C), 36424737(c.19362A>T), 36424800(c.19299G>A), 36424963(c.19136C>A), 36425221(c.18878T>C), 36425317(c.18782G>A), 36425538(c.18561G>A), 36425539(c.18560T>C), 36425644(c.18455T>C), 36425724(c.18375G>A), 36425796(c.18303T>C), 36425846(c.18253C>T), 36425926(c.18173C>G), 36425982(c.18117T>C), 36426023(c.18076A>G), 36426033(c.18066G>C), 36426261(c.17838T>C), 36426287(c.17812G>C), 36426382(c.17717G>T), 36426553(c.17546T>C), 36426761(c.17338C>A), 36426785(c.17314T>A), 36426829(c.17270A>G), 36426947(c.17152T>C), 36427160(c.16939G>A), 36427368(c.16731T>C), 36427481(c.16618A>T), 36427500(c.16599C>T), 36427511(c.16588C>T), 36427603(c.16496C>T), 36427649(c.16450G>A), 36427650(c.16449A>C), 36427763(c.16336C>T), 36427977(c.16122T>C), 36428169(c.*15930G>A),
Insertions	+1kb 36447895 (c.-2663_-2662insAAAAAAAC), 36448835 (c.-3603_-3602insA), 5'UTR CDS 3'UTR INTRON 36433366 (c.354-4906dupA), 36436951 (c.353+1798dupA), 36440063 (c.153-340_153-338dupGTT), 36443068 (c.152+451_152+452insAAAT), 36443297 (c.*152+222dupT), 36444157 (c.185-19_185-16dupATTT), 36444648 (c.184+401_184+402insAA), -1kb
Deletions	+1kb 36445523 (c.-291delA), 36448328 (c.-3103_-3096delTTTACTTA), 36448613 (c.-3388_-3381delATGACACA), 36449342 (c.-4110delT), 36449610 (c.-4379_-4378delTT), 5'UTR CDS 3'UTR INTRON 36430157 (c.354-1705_354-1697delCCAATGACT), 36431719 (c.354-3260_354-3259delTT), 36431733 (c.354-3280_354-3273delATATATAT), 36431976 (c.354-3521_354-3516delGTTTTT), 36432539 (c.354-4079delA), 36432889 (c.354-4429delC), 36434760 (c.353+3985_353+3989delTTTTT), 36436215 (c.353+2534delA), 36441157 (c.153-1432delT), 36443014 (c.152+504_152+505delTC), 36443618 (c.63-10delC), 36444604 (c.184+442_184+445delTTCC), 36444670 (c.184+376_184+379delTCGG), -1kb 36423785 (c.20311_20313delCTC), 36425199 (c.18897_18899delTTT), 36427001 (c.17096_*17097delAA),
coding sequence substitutions
premature termination by the nucleotide substitution	0
synonymous num	0
non-synonymous num	1
synonymous substitutions
non-synonymous substitutions	36445187 (p.Arg16His),
B6 transcript (ENSMUST00000123583)	MAAASRPSWWQRWRRRAWARDGAKLLLFLLLLGSGPGPRHVRAGQAVEYLKREHSLSKPY QGFLCVALAVLELTL*
MSMv4 transcript	MAAASRPSWWQRWRRHAWARDGAKLLLFLLLLGSGPGPRHVRAGQAVEYLKREHSLSKPY QGFLCVALAVLELTL*
homology	98.68 (76 / 76)

Exon Detail Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Lman2l (ENSMUSG00000001143)
Transcript ID	ENSMUST00000123583


..........CCTCAACTAAGTAACTTAAAACCCACCTACCTCTAATCCCTCCCTCCGGT
AATTGGCTGTAGTCAATTCTATTTAACCAATCATTTTAAATCAAGGAACAAGGTTTGCAC
AATAAAAGCATGTAACCCTGAAAATTCACACAGAATTTAGCATACACTTAATTTCTATAA
ATATCATCATGTGATGTTGGTTGATTGTGCTCGTCAACCCAGCATGTAACCCAGGCTGCC
CTTTACACATTTTACAGTTTGCCAGATGTTTGTTTCTTTGGTTTGGTTTGCCTGTTTGAG
ACAGTTTGCCAGATGTTTGTTTCTTTGGTTTGGTTTGCCTGTTTGAGACAAGGTTTCTCT
GTGTAGCCTTGGCTATTCTAGAACTTGCTCTGTAGACCAGGCTTGCCTCAAACTCAGAGA
TCCAAATACCGTTGCCTCCAAGCATTGGGATACAATCCGTGCACCACCACCACCCTGGAA
CCAGTCGTTTCATTCTAATGAATTACTTAGGTCACTCCCTAACTCACTGTGTTGACTTTG
AACTCCTCACCTTCCTGCCTCAGTCTCCAGAGTGCTGGGATGACCTAATGCCTTCCCACA
TCGTAAGTCAAGTTCTTTACCAACACAGCTAGTCTTCAGTTCCTTCCACTCATTTTAGTC
ACGGATTTGTCTATTTTTCTTTTTACTTCTATGCCCTCTTGGCTGTTAGCTTGGCGGCCA
GGTAGGTACAAATGGCAGTGACAATCGGGAAAAAAAAATGTTTTATCGCTTTAAATTTAC
TATAGAATGCAGAAACAAACTAAGAATCTCTATTACTAGCAGGCCTGGTGAAGCCTGGGA
CAAAAGCAGAGAAGGGAGTCTGGACATTCGGCAACGCCCCTTGCCTGGGTTGGCAAGGCA
ACTGCTACTAGTCAGCCAATCGGTGGGATACTCACCTGCGGGGGAGGGAACTCTCCAGGA
GCCAATGGGAGATCGGGCCGATGGTTCCGCAGGCCAATGGGTTGGGCCAC
GGGGCGGGCTTTTTGATGAAGGGCCGGCGGTGGGAAAGATGGCGGCGGCTTCGAGACCCTCCTGGTGGCAGCGGTGGCGGCGGCACGCGTGGGCTCGGGACGGGGCCAAGCTTTTGCTCTTTCTCCTTCTGTTGGGGTCTGGGCCGGGGCCGCGGCATGTCAGGGCGGGTCAAGCGGTGGAGTACTTGAAACGGGAGCACTCGCTGTCGAAGCCCTACCAGG
GTGAGGCGCCCGGGGCGAGGTGGTC..........TTATTTATTTTGTTTTTCGAGACAG
GGTTTCTCTGTGTAGCCTTGGCTGTCCTGGAACTCACTCTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCGCTTGCCTCTGCCTCCCAAATGCTGGGATTAAAG
GTGTGTGCCATCACTGCCCGGCCTG..........TGGGCTGATTCTCCCCTCCCCATAG
GTGTGGGAACAAGCAGTTCTTCGCTATGGAACCTGATGGGCAACGCCATGGTGATGACGCAGTACATCCGCCTCACTCCAGATATGCAAA
GTAAACAGGGTGCCTTGTGGAACCG..........TATGCCGTTGTCTTCCTCACCTTAG
CCATGTTTCCTGAAAGACTGGGAACTGCAGGTGCACTTCAAGATTCACGGCCAAGGGAAGAAGAATCTGCACGGAGACGGCTTGGCAATCTGGTACACAAAGGACCGAATGCAGCCAG
GTATTAGGGATCCTGGGTTGCTTCT..........TTCATCATCTGTTCTCTTTCTCTAG
GGCCTGTGTTTGGAAACATGGACAAATTTGTGGGGCTGGGAGTGTTTGTAGACACCTATCCCAATGAGGAGAAGCAGCACGAG
GTAATGGCGAGTGTCAGAGCTTAGG..........CTGTTTTTCCCTCCCTGTGTTCCAG
CGGGTATTCCCCTACATCTCAGCCATGGTGAACAATGGCTCCCTCAGCTATGATCACGAGCGGGATGGGC
GGCCTACAGAGCTGGGTGGCTGCACAGCCATTGTCCGAAATATCCGTTATGACACCTTCC
TCGTGATTCGCTATGTCAAGAGGCATCTGACGGTGAGTCCTGTCTTAGAGCAGCTGGTGG
TCTGCACTGCCTCTGCTCCTGTGGCCTGACTTTGATACTCTTTGTCTTATTCCAGATAAT
GATGGATATTGATGGCAAACATGAGTGGAGGGACTGCATTGAAATGCCCGGGGTCCGGCT
CCCCCGGGGCTATTACTTCGGCACTTCCTCCATTACTGGGGATCTCTCTGGTACTGTACT
GCTCCTTCTCTCTGTGCCTCAGTTGACCCCTTTGGTCAGGACCCCAGGCTTAGTGAGGCC
CCCTCAAAGGACAGCTAGATAGCTATGGGAAGCCACTCAGATGGTTTCAGAATGCTGCAC
ATTCTTGTCTAGATCTGTAAAAGTTCCAATCCAGGCTCCTTTGGGACAGTTGCAGCCAGG
AGCTACCTAAGCATTGAGTGTGTGTGCCTTGTCTGGGCAGCTCTTCTGGCCTGTGCCTCT
TGCCTGTACTTACTGCTGTGCCCCACCATCCCCTCCTAACCAACCCCAGTCTCTCTCCCT
CTTTGTTCAGACATTTGAATGAAGCTTGTGGACAAGTTTGCTAACCATCTGCCTCCTCCT
GAGCTGCACTTGGTACTGTAAATGTCTACTGTGCCATCTGCATGCTGTAGAGAGCCTTGC
CCGGGCTCTCTTCTGACCAGCCACGTCTGCCTCCTGTGCACAGTGCGCTGTCTCTGCCTT
TCTTTGACTGGTCTGCAGTTCATCTCATCAGCACTGGGGTTCCTACCTTCCTTGGTTGAC
ATGCCAATGCCATACTTAGTTTTGGCCTGGGCAGCCAATTTTTAAAAATATTTATAAACT
TCTAACCTATTGAAGTATATAGTTTTATTGTCATTAATGTTGACTTTTTGTTTGTTGGTT
TCTTTGCATCTTGGTTTTGAGACAGTCTTGCTTTGTACCC..........

No.	Exon / Intron	Start	End	Start Phase	End Phase	Length	Sequence
	5' upstream sequence						..........CCTCAACTAAGTAACTTAAAACCCACCTACCTCTAATCCCTCCCTCCGGT AATTGGCTGTAGTCAATTCTATTTAACCAATCATTTTAAATCAAGGAACAAGGTTTGCAC AATAAAAGCATGTAACCCTGAAAATTCACACAGAATTTAGCATACACTTAATTTCTATAA ATATCATCATGTGATGTTGGTTGATTGTGCTCGTCAACCCAGCATGTAACCCAGGCTGCC CTTTACACATTTTACAGTTTGCCAGATGTTTGTTTCTTTGGTTTGGTTTGCCTGTTTGAG ACAGTTTGCCAGATGTTTGTTTCTTTGGTTTGGTTTGCCTGTTTGAGACAAGGTTTCTCT GTGTAGCCTTGGCTATTCTAGAACTTGCTCTGTAGACCAGGCTTGCCTCAAACTCAGAGA TCCAAATACCGTTGCCTCCAAGCATTGGGATACAATCCGTGCACCACCACCACCCTGGAA CCAGTCGTTTCATTCTAATGAATTACTTAGGTCACTCCCTAACTCACTGTGTTGACTTTG AACTCCTCACCTTCCTGCCTCAGTCTCCAGAGTGCTGGGATGACCTAATGCCTTCCCACA TCGTAAGTCAAGTTCTTTACCAACACAGCTAGTCTTCAGTTCCTTCCACTCATTTTAGTC ACGGATTTGTCTATTTTTCTTTTTACTTCTATGCCCTCTTGGCTGTTAGCTTGGCGGCCA GGTAGGTACAAATGGCAGTGACAATCGGGAAAAAAAAATGTTTTATCGCTTTAAATTTAC TATAGAATGCAGAAACAAACTAAGAATCTCTATTACTAGCAGGCCTGGTGAAGCCTGGGA CAAAAGCAGAGAAGGGAGTCTGGACATTCGGCAACGCCCCTTGCCTGGGTTGGCAAGGCA ACTGCTACTAGTCAGCCAATCGGTGGGATACTCACCTGCGGGGGAGGGAACTCTCCAGGA GCCAATGGGAGATCGGGCCGATGGTTCCGCAGGCCAATGGGTTGGGCCAC
1	EXON 1	36,445,050	36,445,271	-	1	222	GGGGCGGGCTTTTTGATGAAGGGCCGGCGGTGGGAAAGATGGCGGCGGCTTCGAGACCCT CCTGGTGGCAGCGGTGGCGGCGGCACGCGTGGGCTCGGGACGGGGCCAAGCTTTTGCTCT TTCTCCTTCTGTTGGGGTCTGGGCCGGGGCCGCGGCATGTCAGGGCGGGTCAAGCGGTGG AGTACTTGAAACGGGAGCACTCGCTGTCGAAGCCCTACCAGG
	INTRON 1 - 2	36,444,143	36,445,049			907	GTGAGGCGCCCGGGGCGAGGTGGTC..........TTATTTATTTTGTTTTTCGAGACAG
2	EXON 2	36,444,037	36,444,142	1	-	106	GGTTTCTCTGTGTAGCCTTGGCTGTCCTGGAACTCACTCTGTAGACCAGGCTGGCCTCGA ACTCAGAAATCCGCTTGCCTCTGCCTCCCAAATGCTGGGATTAAAG
	INTRON 2 - 3	36,443,610	36,444,036			427	GTGTGTGCCATCACTGCCCGGCCTG..........TGGGCTGATTCTCCCCTCCCCATAG
3	EXON 3	36,443,520	36,443,609	-	-	90	GTGTGGGAACAAGCAGTTCTTCGCTATGGAACCTGATGGGCAACGCCATGGTGATGACGC AGTACATCCGCCTCACTCCAGATATGCAAA
	INTRON 3 - 4	36,439,727	36,443,519			3,793	GTAAACAGGGTGCCTTGTGGAACCG..........TATGCCGTTGTCTTCCTCACCTTAG
4	EXON 4	36,439,609	36,439,726	-	-	118	CCATGTTTCCTGAAAGACTGGGAACTGCAGGTGCACTTCAAGATTCACGGCCAAGGGAAG AAGAATCTGCACGGAGACGGCTTGGCAATCTGGTACACAAAGGACCGAATGCAGCCAG
	INTRON 4 - 5	36,438,833	36,439,608			776	GTATTAGGGATCCTGGGTTGCTTCT..........TTCATCATCTGTTCTCTTTCTCTAG
5	EXON 5	36,438,750	36,438,832	-	-	83	GGCCTGTGTTTGGAAACATGGACAAATTTGTGGGGCTGGGAGTGTTTGTAGACACCTATC CCAATGAGGAGAAGCAGCACGAG
	INTRON 5 - 6	36,428,462	36,438,749			10,288	GTAATGGCGAGTGTCAGAGCTTAGG..........CTGTTTTTCCCTCCCTGTGTTCCAG
6	EXON 6	36,428,392	36,428,461	-	-	70	CGGGTATTCCCCTACATCTCAGCCATGGTGAACAATGGCTCCCTCAGCTATGATCACGAG CGGGATGGGC
	3' upstream sequence						GGCCTACAGAGCTGGGTGGCTGCACAGCCATTGTCCGAAATATCCGTTATGACACCTTCC TCGTGATTCGCTATGTCAAGAGGCATCTGACGGTGAGTCCTGTCTTAGAGCAGCTGGTGG TCTGCACTGCCTCTGCTCCTGTGGCCTGACTTTGATACTCTTTGTCTTATTCCAGATAAT GATGGATATTGATGGCAAACATGAGTGGAGGGACTGCATTGAAATGCCCGGGGTCCGGCT CCCCCGGGGCTATTACTTCGGCACTTCCTCCATTACTGGGGATCTCTCTGGTACTGTACT GCTCCTTCTCTCTGTGCCTCAGTTGACCCCTTTGGTCAGGACCCCAGGCTTAGTGAGGCC CCCTCAAAGGACAGCTAGATAGCTATGGGAAGCCACTCAGATGGTTTCAGAATGCTGCAC ATTCTTGTCTAGATCTGTAAAAGTTCCAATCCAGGCTCCTTTGGGACAGTTGCAGCCAGG AGCTACCTAAGCATTGAGTGTGTGTGCCTTGTCTGGGCAGCTCTTCTGGCCTGTGCCTCT TGCCTGTACTTACTGCTGTGCCCCACCATCCCCTCCTAACCAACCCCAGTCTCTCTCCCT CTTTGTTCAGACATTTGAATGAAGCTTGTGGACAAGTTTGCTAACCATCTGCCTCCTCCT GAGCTGCACTTGGTACTGTAAATGTCTACTGTGCCATCTGCATGCTGTAGAGAGCCTTGC CCGGGCTCTCTTCTGACCAGCCACGTCTGCCTCCTGTGCACAGTGCGCTGTCTCTGCCTT TCTTTGACTGGTCTGCAGTTCATCTCATCAGCACTGGGGTTCCTACCTTCCTTGGTTGAC ATGCCAATGCCATACTTAGTTTTGGCCTGGGCAGCCAATTTTTAAAAATATTTATAAACT TCTAACCTATTGAAGTATATAGTTTTATTGTCATTAATGTTGACTTTTTGTTTGTTGGTT TCTTTGCATCTTGGTTTTGAGACAGTCTTGCTTTGTACCC..........

Sequence Detail Report

Gene Symbol (Gene ID)	Lman2l (ENSMUSG00000001143)
Transcript ID	ENSMUST00000123583

		SNP Information
Strain :
Sequence Retrieve :
Exon translate : CDS Start ( 1 ) - End ( 76 ) -
Strand :	forward reverse
Show sequence :	nucleotide amino acid
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