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Target CDS Information

Gene Symbol (Gene ID) Dsp (ENSMUSG00000054889)
Cross Reference
EMBL AC140331
GO GO:0001533, GO:0002934, GO:0005080, ...show all
goslim_goa GO:0003674, GO:0003723, GO:0005198, ...show all
MGI_trans_name Dsp-002
OTTP OTTMUSP00000043297
OTTT OTTMUST00000081067
RefSeq_mRNA_predicted XM_006516532.2
RefSeq_peptide_predicted XP_006516595.1
UCSC uc007qdk.2
UniParc UPI0000606D33
Uniprot/SPTREMBL E9PZW0
Vega_transcript Dsp-002, OTTMUST00000081067
Vega_translation 214374, OTTMUSP00000043297
Definition protein_id:ENSMUSP00000117252
translation:
MSCNGGSHPRINTLGRMTRAESGPDLRYEMTYSGGGGGGGGGGGGGTSRTFYSHSRRCTV
NDQNSDGYCQTGTMSRHQNQNTIQEMLQNCSDCLMRAELIAQPELKFGEGMQLAWNRELD
EYFTQANDQMEIIDGLIREMRQMGQPCDAYQKRLLQLQEQMRALYKAISVPRVRRASSKG
AGGYTCQSGSGWDEFTKRLTGECLGWMRQQREEMDLMAWGVDAGSVEQHINSHRSIHNTI
GDYRWQLDKIKADLREKSAIYQLEEEYENLLKASFERMDHLRQLQNIIQATSREIMWIND
CEEEELLYDWSDKNTNIAQKQEAFSIRMSQLEVKEKELNKLKQESDQLVLNQHPASDKIE
AYMDTLQTQWSWILQITKCIDVHLKENAAYFQFFEEAQSTEAYLKGLQDSIRKKYPCDKN
MPLQHLLEQIKELEKEREKIIEYKRQVQNLVNKSKKIVQLKPRNPDYRSNKPIILRALCD
YKQDQKIVHKGDECILKDNNERSKWYVTGPGGVDMLVPSVGLIIPPPNPLAVDLSCKIEQ
YYEAILALWNQLYINMKSLVSWHYCMIDIEKIRAMTIAKLKTMRQEDYMKTIEDLELHYQ
DFIKNSQGSEMFGDDDKRRMQSQFTDAQKHYQTLVIQLPGHPQHQTVTKTEITHLGTCQD
VNHNKVIETNRENDKQETWLLMELQKIRRQMEHCEARMTLKNLLLAEQGSTHHITVKINE
LKSVQNDSQALAEVLNQLKDMLANFRGSEKYCYLQNEIFGLFQKLENINGVSDGYLNSLC
SVRALLQAILQTEDMLKVYEARLTEEETVCLDLDKVEAYRCGLKKIKNDLNLKKSLLATM
KTELQKAQQIHSQSSQQYPLYDLDLGKFTEKVTQLTDRWQKIDKQIDFRLWDLEKQIKQL
RNYRDNYQSFCKWLYDAKRRQDSLESMKFGDSNTVMRFLNEQKNLHSEISGKRDKSEEVH
KIAELCANSIKDYELQLASYTSGLETLLNIPIKRTMVQSPSGVILQEAADIHARYIELLT
RSGDYYRFLSEMLKSLEDLKLKNTKIEVLEEELRLARDANSENCNKNKFLDQNLQKYQAE
CSQFKAKLVSLEELKRQAELDGKSAKQNLDKCYGQIKELNEKITRLTYEIEDEKRRRKTV
EDRFDQQKNDYDQLQKARQCEKENLSWQKLESEKAIKEKEYEIERLRVLLQEEGARKREY
ENELAKASNRIQESKSQCTQVVQERESLLVKIKVLEQDKARLQRLEDELNRAKATLEAES
RVKQRLECEKQQIQNDLNQWKTQYSRKEETIRKIESEREKSEREKNSLRSEIERLQAEIK
RIEERCRRKLEDSSRETQSQLESERCRLQKEIEKLRQRPYGSHRETQTEYEWTVDSSKLV
FDGLRKKVTAMQLYECQLIDKTTLDKLLKGKKSVEEVASEIQPFLRGAGAIAGASASPKE
KYSLVEAKRKKFITPESTVMLLEAQAATGGIIDPHRNEKLTVDNAVARDLIDFDDRQQIY
TAEKAITGFDDPFSGKTVSVSEAIKKNLIDRETGMRLLEAQLASGGVVDPVNSVFLPKDV
ALARGLIDRDLYRSLNDPRDSQKNFVDPITKKKVSYMQLRERCRIEPHTGLLLLSVQKRS
MSFQGIRQPVTVTELVDSGILRPSTVNELESGQISYDEVGERIKDFLQGSSCIAGIYNET
TKQKLGIYEAMKIGLVRPGTALELLEAQAATGFIVDPVSNLRLPVEEAYKRGLVGIEFKE
KLLSAERAVTGYNDPETGNIISLFQAMNKELIEKGHGIRLLEAQIATGGIIDPKESHRLP
VDMAYKRGYFNEELSEILSDPSDDTKGFFDPNTEENLTYLQLKERCIKDEETGLCLLPLK
EKKKQVQTSQKNTLRKRRVVIVDPETNKEMSVQEAYKKGLIDYDTFKELCEQECEWEEIT
ITGSDGSTRVVLVDRKTGSQYDIQDAIDKGLVDRKFFDQYRSGSLSLTQFADMISLKNGV
GNSSGLGGSVNDDVFSSSRHDSVSKISTISSVRNLTIRSSSLSDPLEESSPIAAIFDTEN
LEKISIAEGIERGIVDSITGQRLLEAQACTGGIIHPTTGQKLSLQDAVNQGLIDQDMATR
LKPAQKAFIGFEGVKGKKKMSAAEAVKEKWLPYEAGQRFLEFQFLTGGLVDPEVHGRIST
EEAIRKGFIDGRAAQRLQDISSYAKILTCPKTKLKISYKDAMNRSMVEDITGLRLLEAAS
VSSKGLPSPYNMSAPGSRSGSRSGSRSGSRSGSRSGSRRGSFDATGNSSYSYSYSFSSSS
IGGY

Chromosome 13
Length
Position(start - end)
46,342
38,151,589 - 38,197,932
Orient to Chromosome plus
Link Location : (13:38151589-38197932)
/

Detail Map


 

Report

Polymorphisms Report

Target Strain  MSMv4  JF1v3  KJRv1  SWNv1  CHDv1  NJLv1  BLG2v1  HMIv1  BFMv1  PGN2v1
Gene Symbol (Gene ID) Dsp (ENSMUSG00000054889)
Transcript ID ENSMUST00000127906
Reports
substitution
cSNPs46
Insertion52
Deletion55
SNPs
-1kb
5'UTR
CDS
3'UTR
INTRON
+1kb
Insertions
-1kb
5'UTR
CDS
3'UTR
INTRON
+1kb
Deletions
-1kb
5'UTR
CDS
3'UTR
INTRON
+1kb
coding sequence substitutions
premature termination by the nucleotide substitution0
synonymous num42
non-synonymous num4
synonymous substitutions 38151660 (p.Pro24Pro), 38164824 (p.Asn89Asn), 38167548 (p.Ala114Ala), 38168672 (p.Arg175Arg), 38177273 (p.Ala389Ala), 38178448 (p.Ala397Ala), 38178541 (p.Glu428Glu), 38178554 (p.Leu433Leu), 38181172 (p.Pro510Pro), 38183132 (p.Gln585Gln), 38184007 (p.Ile667Ile), 38184040 (p.Thr678Thr), 38184044 (p.Leu680Leu), 38185182 (p.Tyr751Tyr), 38185212 (p.Leu761Leu), 38185245 (p.Ser772Ser), 38185576 (p.Leu779Leu), 38185654 (p.Glu805Glu), 38185702 (p.Cys821Cys), 38186717 (p.Leu865Leu), 38186750 (p.Thr876Thr), 38187840 (p.Asp922Asp), 38187858 (p.Lys928Lys), 38189581 (p.Gly983Gly), 38190470 (p.Leu1033Leu), 38191636 (p.Asp1132Asp), 38191657 (p.Thr1139Thr), 38191699 (p.Gln1153Gln), 38194929 (p.Tyr1284Tyr), 38195013 (p.Ile1312Ile), 38195184 (p.Glu1369Glu), 38195451 (p.Thr1458Thr), 38195709 (p.Ser1544Ser), 38195892 (p.Ile1605Ile), 38195949 (p.Gln1624Gln), 38196006 (p.Pro1643Pro), 38196048 (p.Asp1657Asp), 38196120 (p.Thr1681Thr), 38196327 (p.Thr1750Thr), 38196576 (p.Thr1833Thr), 38196871 (p.Leu1932Leu), 38197164 (p.Ser2029Ser),
non-synonymous substitutions 38188460 (p.Ser947Asn), 38191736 (p.Ser1166Gly), 38195210 (p.Lys1378Thr), 38196959 (p.Arg1961Leu),
B6 transcript
(ENSMUST00000127906)
MSCNGGSHPRINTLGRMTRAESGPDLRYEMTYSGGGGGGGGGGGGGTSRTFYSHSRRCTV
NDQNSDGYCQTGTMSRHQNQNTIQEMLQNCSDCLMRAELIAQPELKFGEGMQLAWNRELD
EYFTQANDQMEIIDGLIREMRQMGQPCDAYQKRLLQLQEQMRALYKAISVPRVRRASSKG
AGGYTCQSGSGWDEFTKRLTGECLGWMRQQREEMDLMAWGVDAGSVEQHINSHRSIHNTI
GDYRWQLDKIKADLREKSAIYQLEEEYENLLKASFERMDHLRQLQNIIQATSREIMWIND
CEEEELLYDWSDKNTNIAQKQEAFSIRMSQLEVKEKELNKLKQESDQLVLNQHPASDKIE
AYMDTLQTQWSWILQITKCIDVHLKENAAYFQFFEEAQSTEAYLKGLQDSIRKKYPCDKN
MPLQHLLEQIKELEKEREKIIEYKRQVQNLVNKSKKIVQLKPRNPDYRSNKPIILRALCD
YKQDQKIVHKGDECILKDNNERSKWYVTGPGGVDMLVPSVGLIIPPPNPLAVDLSCKIEQ
YYEAILALWNQLYINMKSLVSWHYCMIDIEKIRAMTIAKLKTMRQEDYMKTIEDLELHYQ
DFIKNSQGSEMFGDDDKRRMQSQFTDAQKHYQTLVIQLPGHPQHQTVTKTEITHLGTCQD
VNHNKVIETNRENDKQETWLLMELQKIRRQMEHCEARMTLKNLLLAEQGSTHHITVKINE
LKSVQNDSQALAEVLNQLKDMLANFRGSEKYCYLQNEIFGLFQKLENINGVSDGYLNSLC
SVRALLQAILQTEDMLKVYEARLTEEETVCLDLDKVEAYRCGLKKIKNDLNLKKSLLATM
KTELQKAQQIHSQSSQQYPLYDLDLGKFTEKVTQLTDRWQKIDKQIDFRLWDLEKQIKQL
RNYRDNYQSFCKWLYDAKRRQDSLESMKFGDSNTVMRFLNEQKNLHSEISGKRDKSEEVH
KIAELCANSIKDYELQLASYTSGLETLLNIPIKRTMVQSPSGVILQEAADIHARYIELLT
RSGDYYRFLSEMLKSLEDLKLKNTKIEVLEEELRLARDANSENCNKNKFLDQNLQKYQAE
CSQFKAKLVSLEELKRQAELDGKSAKQNLDKCYGQIKELNEKITRLTYEIEDEKRRRKTV
EDRFDQQKNDYDQLQKARQCEKENLSWQKLESEKAIKEKEYEIERLRVLLQEEGARKREY
ENELAKASNRIQESKSQCTQVVQERESLLVKIKVLEQDKARLQRLEDELNRAKATLEAES
RVKQRLECEKQQIQNDLNQWKTQYSRKEETIRKIESEREKSEREKNSLRSEIERLQAEIK
RIEERCRRKLEDSSRETQSQLESERCRLQKEIEKLRQRPYGSHRETQTEYEWTVDSSKLV
FDGLRKKVTAMQLYECQLIDKTTLDKLLKGKKSVEEVASEIQPFLRGAGAIAGASASPKE
KYSLVEAKRKKFITPESTVMLLEAQAATGGIIDPHRNEKLTVDNAVARDLIDFDDRQQIY
TAEKAITGFDDPFSGKTVSVSEAIKKNLIDRETGMRLLEAQLASGGVVDPVNSVFLPKDV
ALARGLIDRDLYRSLNDPRDSQKNFVDPITKKKVSYMQLRERCRIEPHTGLLLLSVQKRS
MSFQGIRQPVTVTELVDSGILRPSTVNELESGQISYDEVGERIKDFLQGSSCIAGIYNET
TKQKLGIYEAMKIGLVRPGTALELLEAQAATGFIVDPVSNLRLPVEEAYKRGLVGIEFKE
KLLSAERAVTGYNDPETGNIISLFQAMNKELIEKGHGIRLLEAQIATGGIIDPKESHRLP
VDMAYKRGYFNEELSEILSDPSDDTKGFFDPNTEENLTYLQLKERCIKDEETGLCLLPLK
EKKKQVQTSQKNTLRKRRVVIVDPETNKEMSVQEAYKKGLIDYDTFKELCEQECEWEEIT
ITGSDGSTRVVLVDRKTGSQYDIQDAIDKGLVDRKFFDQYRSGSLSLTQFADMISLKNGV
GNSSGLGGSVNDDVFSSSRHDSVSKISTISSVRNLTIRSSSLSDPLEESSPIAAIFDTEN
LEKISIAEGIERGIVDSITGQRLLEAQACTGGIIHPTTGQKLSLQDAVNQGLIDQDMATR
LKPAQKAFIGFEGVKGKKKMSAAEAVKEKWLPYEAGQRFLEFQFLTGGLVDPEVHGRIST
EEAIRKGFIDGRAAQRLQDISSYAKILTCPKTKLKISYKDAMNRSMVEDITGLRLLEAAS
VSSKGLPSPYNMSAPGSRSGSRSGSRSGSRSGSRSGSRRGSFDATGNSSYSYSYSFSSSS
IGGY*
MSMv4 transcript
MSCNGGSHPRINTLGRMTRAESGPDLRYEMTYSGGGGGGGGGGGGGTSRTFYSHSRRCTV
NDQNSDGYCQTGTMSRHQNQNTIQEMLQNCSDCLMRAELIAQPELKFGEGMQLAWNRELD
EYFTQANDQMEIIDGLIREMRQMGQPCDAYQKRLLQLQEQMRALYKAISVPRVRRASSKG
AGGYTCQSGSGWDEFTKRLTGECLGWMRQQREEMDLMAWGVDAGSVEQHINSHRSIHNTI
GDYRWQLDKIKADLREKSAIYQLEEEYENLLKASFERMDHLRQLQNIIQATSREIMWIND
CEEEELLYDWSDKNTNIAQKQEAFSIRMSQLEVKEKELNKLKQESDQLVLNQHPASDKIE
AYMDTLQTQWSWILQITKCIDVHLKENAAYFQFFEEAQSTEAYLKGLQDSIRKKYPCDKN
MPLQHLLEQIKELEKEREKIIEYKRQVQNLVNKSKKIVQLKPRNPDYRSNKPIILRALCD
YKQDQKIVHKGDECILKDNNERSKWYVTGPGGVDMLVPSVGLIIPPPNPLAVDLSCKIEQ
YYEAILALWNQLYINMKSLVSWHYCMIDIEKIRAMTIAKLKTMRQEDYMKTIEDLELHYQ
DFIKNSQGSEMFGDDDKRRMQSQFTDAQKHYQTLVIQLPGHPQHQTVTKTEITHLGTCQD
VNHNKVIETNRENDKQETWLLMELQKIRRQMEHCEARMTLKNLLLAEQGSTHHITVKINE
LKSVQNDSQALAEVLNQLKDMLANFRGSEKYCYLQNEIFGLFQKLENINGVSDGYLNSLC
SVRALLQAILQTEDMLKVYEARLTEEETVCLDLDKVEAYRCGLKKIKNDLNLKKSLLATM
KTELQKAQQIHSQSSQQYPLYDLDLGKFTEKVTQLTDRWQKIDKQIDFRLWDLEKQIKQL
RNYRDNYQSFCKWLYDAKRRQDSLESMKFGDSNTVMRFLNEQKNLHNEISGKRDKSEEVH
KIAELCANSIKDYELQLASYTSGLETLLNIPIKRTMVQSPSGVILQEAADIHARYIELLT
RSGDYYRFLSEMLKSLEDLKLKNTKIEVLEEELRLARDANSENCNKNKFLDQNLQKYQAE
CSQFKAKLVSLEELKRQAELDGKSAKQNLDKCYGQIKELNEKITRLTYEIEDEKRRRKTV
EDRFDQQKNDYDQLQKARQCEKENLGWQKLESEKAIKEKEYEIERLRVLLQEEGARKREY
ENELAKASNRIQESKSQCTQVVQERESLLVKIKVLEQDKARLQRLEDELNRAKATLEAES
RVKQRLECEKQQIQNDLNQWKTQYSRKEETIRKIESEREKSEREKNSLRSEIERLQAEIK
RIEERCRRKLEDSSRETQSQLESERCRLQKEIEKLRQRPYGSHRETQTEYEWTVDSSTLV
FDGLRKKVTAMQLYECQLIDKTTLDKLLKGKKSVEEVASEIQPFLRGAGAIAGASASPKE
KYSLVEAKRKKFITPESTVMLLEAQAATGGIIDPHRNEKLTVDNAVARDLIDFDDRQQIY
TAEKAITGFDDPFSGKTVSVSEAIKKNLIDRETGMRLLEAQLASGGVVDPVNSVFLPKDV
ALARGLIDRDLYRSLNDPRDSQKNFVDPITKKKVSYMQLRERCRIEPHTGLLLLSVQKRS
MSFQGIRQPVTVTELVDSGILRPSTVNELESGQISYDEVGERIKDFLQGSSCIAGIYNET
TKQKLGIYEAMKIGLVRPGTALELLEAQAATGFIVDPVSNLRLPVEEAYKRGLVGIEFKE
KLLSAERAVTGYNDPETGNIISLFQAMNKELIEKGHGIRLLEAQIATGGIIDPKESHRLP
VDMAYKRGYFNEELSEILSDPSDDTKGFFDPNTEENLTYLQLKERCIKDEETGLCLLPLK
EKKKQVQTSQKNTLRKRRVVIVDPETNKEMSVQEAYKKGLIDYDTFKELCEQECEWEEIT
ITGSDGSTRVVLVDRKTGSQYDIQDAIDKGLVDRKFFDQYLSGSLSLTQFADMISLKNGV
GNSSGLGGSVNDDVFSSSRHDSVSKISTISSVRNLTIRSSSLSDPLEESSPIAAIFDTEN
LEKISIAEGIERGIVDSITGQRLLEAQACTGGIIHPTTGQKLSLQDAVNQGLIDQDMATR
LKPAQKAFIGFEGVKGKKKMSAAEAVKEKWLPYEAGQRFLEFQFLTGGLVDPEVHGRIST
EEAIRKGFIDGRAAQRLQDISSYAKILTCPKTKLKISYKDAMNRSMVEDITGLRLLEAAS
VSSKGLPSPYNMSAPGSRSGSRSGSRSGSRSGSRSGSRRGSFDATGNSSYSYSYSFSSSS
IGGY*
homology99.82 (2285 / 2285)

Exon Detail Report

Target Strain  MSMv4  JF1v3  KJRv1  SWNv1  CHDv1  NJLv1  BLG2v1  HMIv1  BFMv1  PGN2v1
Gene Symbol (Gene ID) Dsp (ENSMUSG00000054889)
Transcript ID ENSMUST00000127906
No. Exon / Intron Start End Start Phase End Phase Length Sequence
5' upstream sequence
..........AATTAGATAGGGCACATATTTAGAAAACCTCCTCTTCTCCTTTACAGCAT
ACCAATGTAGTTTGGTATTTAGTTTTTGGGCTGCTTTAACCAGCTCATGAACATTTGAGA
AATACATTGTACAAACAGAAAAGCTAACAGACATTATTCAGGGAGACAAGAAATATTTAT
TACCAAGATCTTTAAGTGGTGTTTACTAGAGAGCATTTAACGCCACCCCAAGTTATCTAA
ACAGCTTTTAATGGCTAGTGTACAGGGGTCTGTATCTAAAGTCAGTTTATGGAGACTACG
GTGTAAATAGCACTCATCTGCTAACTGGGAGTGGCTTTGGAACCAATCGGTGGAATGTGT
TACTCATCTGGAACGGTATCTGTTCAGGCTTCATGGGAGCAGAAAGGGACCCAAGTTGGG
GCTCAGGAGTCTACAGGGGACAAACGTGCTCATGATTCTTTTAGAGAAATGGAAAACCAC
GTCTTGTTTCTGTTTCAGGCAAAGTCCTGCTATGAAGCCCAGTCTAGCCTTGAACTAAGT
CCCTCATGACAAAATATTTCTGGAGAAGCCCTTTTCGGGATTCTCTGTTAAATTATCTTT
TACACAACAGAAATCGAACTCTTGGGGCTATTTAAATAGAAGCTGGCATGGTTTCCTGGG
ATAAGCAAAAAGTCAACATTTCACTAGAGTCGTCCCATGGAGTGACCCTCCCAAGCCACT
TTATTTCCGCCTCTTGGGGGAGTAGGAAATCCTCCAAAGGTGTGCCACTGTGGCTCCTAG
AGCCTGAAGCAAGTCCCGCGGGGTCGCAGCCCTCCGACGGGGATCCAGTCGCCAGGTCCC
CGCCCCTCGCCTCTGCTCAGGCTTCGGTGGCGCAGGGCGGAGCCGCAGGTTGGGGAGGGC
GGCCCCAGGCGTCGGTGACACGCGGGGGGGAGGGCGGGGGAGGCGAGGCAGCCGCACCTC
GCCCTGGGAAGAAGCCGACCAGGTGTGGCCTGGGCGCCGGGTGCCAGCGG
1 EXON 1 38,151,328 38,151,794 - 2 467
GGAGGAGACTCGCACCGCCTCGACCAACACCAACACCCAGGCGCGACCCAGCTCCTCTGA
GCCCTCGCTGCCCTCCGAGCCACAGCTCCACTCCGGTTCCCGCGCCTAGCCAGTCGCCGT
CCCCGTCTCCGCCCTGCTGGAGCGCTGAGCCCTCGCCAGTCCTCTGCGTTCCGCGCTCCT
CTCCCGGAGTCCCTCGCGTGCTCCGAGGCGACGCCTCGCGTATGCCGCGGCGCTGAGCGG
CTCTCTTGAGTGACCGCAGACATGAGCTGCAACGGCGGCTCCCACCCGCGGATCAACACG
CTGGGTCGCATGACCCGCGCGGAGTCCGGCCCAGACCTGCGCTACGAGATGACCTACAGC
GGTGGCGGCGGCGGGGGCGGCGGGGGCGGCGGCGGGGGCACCAGCAGGACGTTCTACTCC
CACTCCCGGCGCTGCACCGTCAACGACCAGAACTCCGACGGCTACTG
INTRON 1 - 2 38,151,795 38,164,763 12,969
GTGGGTATCAGCCCGCCGCCACCTA..........TGTCTGGGTTTCTTTGTCTCCACAG
2 EXON 2 38,164,764 38,164,866 2 0 103
TCAAACCGGCACCATGTCTAGACATCAGAATCAGAACACCATCCAAGAAATGCTGCAAAA
CTGCTCAGACTGTCTGATGCGGGCGGAGCTGATCGCGCAGCCG
INTRON 2 - 3 38,164,867 38,167,515 2,649
GTAAGCTCCCCTCACTTCTCCAGTC..........TTTTCATGCAACTTTTTCCTGATAG
3 EXON 3 38,167,516 38,167,664 0 2 149
GAACTGAAATTCGGAGAAGGGATGCAGCTGGCGTGGAACCGAGAGCTGGATGAGTATTTT
ACACAAGCCAACGATCAGATGGAAATCATAGACGGCTTGATCCGAGAGATGAGGCAGATG
GGCCAGCCCTGTGATGCGTATCAGAAAAG
INTRON 3 - 4 38,167,665 38,168,605 941
GTATTGCCTGCAGAGCACGGAGGGG..........GCAGCACTCTTTCCTTTCCTTTCAG
4 EXON 4 38,168,606 38,168,780 2 0 175
ACTGCTTCAGCTCCAGGAACAAATGCGAGCCCTTTACAAGGCCATCAGCGTCCCTCGGGT
CCGAAGGGCCAGCTCCAAGGGAGCCGGAGGGTACACTTGCCAGAGTGGATCCGGCTGGGA
CGAGTTCACCAAACGCCTCACGGGCGAGTGTCTGGGCTGGATGAGGCAGCAGAGG
INTRON 4 - 5 38,168,781 38,172,778 3,998
GTAAGTGACCCTACAGGGCTTGTTC..........GTGCTCCCTGTCTCTCTTGCTGCAG
5 EXON 5 38,172,779 38,172,907 0 0 129
GAGGAAATGGACCTGATGGCCTGGGGTGTGGACGCTGGTTCAGTGGAACAGCACATCAAT
AGCCACAGGAGCATCCACAACACCATTGGGGACTACCGCTGGCAGCTGGACAAGATCAAA
GCAGACCTG
INTRON 5 - 6 38,172,908 38,173,817 910
GTACCTCTCATATTCACCACGGGGT..........TTACCTGCGTTTTCTTATCTTCCAG
6 EXON 6 38,173,818 38,173,868 0 0 51
CGTGAGAAGTCAGCAATCTACCAGTTGGAGGAGGAATATGAAAACCTGCTG
INTRON 6 - 7 38,173,869 38,175,067 1,199
GTAAGCTCGTCTAGCCTCTGCTAAT..........ACGCCGCTCTCAACCCTGTCTGCAG
7 EXON 7 38,175,068 38,175,229 0 0 162
AAAGCCTCCTTCGAGAGGATGGACCACCTGCGCCAGCTGCAGAACATCATCCAGGCCACC
TCTCGAGAGATCATGTGGATCAATGACTGCGAGGAGGAGGAGCTGCTCTATGACTGGAGC
GACAAGAACACCAACATCGCTCAGAAGCAGGAGGCCTTCTCT
INTRON 7 - 8 38,175,230 38,176,395 1,166
GTAAGATGCCCTGCCTTGTGTGTGT..........ATGGACTGGTCCTTTCTTTTCACAG
8 EXON 8 38,176,396 38,176,500 0 0 105
ATACGCATGAGTCAACTGGAGGTCAAGGAAAAGGAACTCAATAAGCTTAAACAAGAAAGT
GACCAGCTTGTCCTCAATCAGCATCCAGCTTCAGACAAAATTGAG
INTRON 8 - 9 38,176,501 38,177,186 686
GTAGGCTTCATGGGATTTACATTCT..........ACATCTTGGCGTTTTCTTCTTTCAG
9 EXON 9 38,177,187 38,177,282 0 0 96
GCATACATGGACACTCTTCAGACGCAGTGGAGCTGGATTCTGCAGATCACCAAGTGCATT
GATGTCCATCTCAAAGAAAACGCTGCCTACTTCCAG
INTRON 9 - 10 38,177,283 38,178,433 1,151
GTTTTTAGACACATCTTTTTTTTTT..........TGAGGATTGCTGTCATTCCCAACAG
10 EXON 10 38,178,434 38,178,559 0 0 126
TTTTTTGAAGAGGCCCAGTCAACTGAAGCCTACCTGAAGGGCCTGCAGGACTCCATCAGG
AAGAAATACCCCTGTGACAAGAATATGCCTCTCCAGCACCTGCTGGAACAGATCAAAGAG
TTGGAG
INTRON 10 - 11 38,178,560 38,179,047 488
GTACCGTGACACACCCAGGCCCTCA..........AGGCAGACTGTGTTTGCAATTGCAG
11 EXON 11 38,179,048 38,179,200 0 0 153
AAAGAACGGGAGAAGATCATTGAATACAAGCGTCAGGTGCAGAACTTGGTAAACAAGTCC
AAGAAGATCGTGCAGCTGAAACCTCGGAACCCAGACTACAGGAGCAACAAGCCCATTATC
CTCAGGGCTCTCTGCGACTACAAACAAGACCAG
INTRON 11 - 12 38,179,201 38,181,097 1,897
GTGTGTGTTCCCCACTCAGAGGCCG..........ATTTTCATCCCTGTTTCTTTGGCAG
12 EXON 12 38,181,098 38,181,252 0 2 155
AAAATCGTACACAAAGGGGATGAGTGTATTCTGAAGGACAACAACGAGCGCAGCAAGTGG
TACGTGACGGGCCCTGGAGGCGTGGACATGCTTGTCCCTTCCGTGGGCCTGATCATCCCG
CCTCCGAACCCACTGGCTGTGGACCTTTCTTGCAA
INTRON 12 - 13 38,181,253 38,182,201 949
GTAAGTTCTGAGGTTCCTAACAACT..........AGTGTTTTCCCTTTCTGCCTCTCAG
13 EXON 13 38,182,202 38,182,328 2 0 127
GATTGAGCAGTACTATGAAGCCATCTTGGCTCTGTGGAACCAGCTCTACATCAACATGAA
GAGCCTGGTGTCTTGGCACTACTGCATGATTGACATCGAGAAGATCAGAGCCATGACTAT
TGCCAAG
INTRON 13 - 14 38,182,329 38,183,114 786
GTATGTCTCCAGGGCTGCCTAAAGG..........CTCACTGTGCCCGATTCGCTTCTAG
14 EXON 14 38,183,115 38,183,316 0 1 202
CTGAAAACGATGAGACAGGAAGATTACATGAAGACCATCGAAGACCTTGAGCTCCATTAC
CAAGACTTCATCAAGAACAGCCAAGGCTCGGAGATGTTTGGAGACGACGACAAGCGGCGG
ATGCAGTCCCAGTTCACCGATGCCCAGAAGCATTACCAGACCCTGGTCATTCAGCTTCCT
GGCCACCCCCAGCACCAGACAG
INTRON 14 - 15 38,183,317 38,183,945 629
GTCAGCCTGGACCATCTCTTGCCTT..........GTATGGTCCTAACTTATTTTTACAG
15 EXON 15 38,183,946 38,184,172 1 0 227
TCACCAAAACCGAAATCACTCACCTGGGTACCTGCCAAGATGTCAACCACAATAAAGTGA
TTGAAACGAACCGAGAAAACGACAAACAGGAGACGTGGCTGCTGATGGAGCTGCAGAAGA
TCCGCAGGCAGATGGAGCATTGTGAGGCCAGGATGACGCTTAAAAATCTCCTGCTGGCAG
AGCAAGGCTCTACACACCACATCACCGTGAAAATCAACGAGCTCAAG
INTRON 15 - 16 38,184,173 38,185,095 923
GTAGGACCTGCTAACGTTAATCTCC..........TTGTGCTCCCCTCCTTTCTTGACAG
16 EXON 16 38,185,096 38,185,262 0 2 167
AGCGTACAGAACGACTCCCAAGCCCTGGCCGAGGTTCTCAATCAGCTTAAAGACATGCTT
GCCAACTTCCGAGGCTCTGAAAAGTATTGCTACCTGCAGAATGAGATATTTGGACTATTT
CAGAAGCTGGAAAATATCAATGGTGTCTCAGATGGCTACTTAAACAG
INTRON 16 - 17 38,185,263 38,185,572 310
GTGTGCACTGCCAATGTTGCTTAAG..........TAGCCACGTCTTTTGCTCTTTGCAG
17 EXON 17 38,185,573 38,185,711 2 0 139
CCTATGTTCCGTGAGAGCCCTTCTCCAGGCTATTCTGCAAACGGAAGACATGCTGAAGGT
CTATGAAGCGAGGCTGACGGAGGAGGAAACTGTCTGTCTGGACCTGGATAAAGTAGAGGC
TTACCGCTGTGGGCTGAAG
INTRON 17 - 18 38,185,712 38,186,594 883
GTAACGTAAACAGTCGGAACTGTAG..........GCACCTTTCCCCCTTTAACTTGCAG
18 EXON 18 38,186,595 38,186,788 0 2 194
AAAATAAAAAATGACTTGAACTTGAAAAAGTCGCTGTTGGCCACCATGAAGACGGAGCTG
CAGAAGGCACAGCAGATCCACTCCCAGTCCTCTCAGCAGTACCCGCTCTATGACCTGGAC
CTAGGCAAATTCACTGAGAAAGTGACCCAGCTGACAGACCGCTGGCAAAAGATAGATAAA
CAGATAGACTTCAG
INTRON 18 - 19 38,186,789 38,187,740 952
GTGTGTCGGTCCTCTTCCTTCCCCG..........AATAATTTTATGCATTTTTCCATAG
19 EXON 19 38,187,741 38,187,903 2 0 163
ATTGTGGGACCTGGAGAAACAAATCAAACAACTGAGGAATTATCGGGACAACTATCAGAG
CTTCTGCAAGTGGCTATATGATGCCAAACGCCGCCAGGATTCTTTAGAGTCCATGAAATT
TGGAGATTCCAACACAGTCATGCGGTTTTTGAATGAGCAGAAG
INTRON 19 - 20 38,187,904 38,188,449 546
GTATAGCCCGACTCCAACGTCCTGT..........GTTTGAAATATTTCATTCTGTATAG
20 EXON 20 38,188,450 38,188,533 0 0 84
AACCTGCACAATGAAATATCTGGCAAACGAGACAAATCAGAAGAAGTGCATAAAATCGCT
GAACTTTGCGCAAACTCAATTAAG
INTRON 20 - 21 38,188,534 38,189,545 1,012
GTATATCGGTTCCATTAAGAATGAT..........TTTCCTAAACTTTGTTATTCTGCAG
21 EXON 21 38,189,546 38,189,653 0 0 108
GATTATGAACTGCAGCTGGCATCGTACACCTCAGGACTGGAAACTCTACTGAACATACCT
ATCAAGAGGACCATGGTTCAGTCCCCATCCGGGGTGATTCTGCAAGAG
INTRON 21 - 22 38,189,654 38,190,394 741
GTATGTAGTAAGTCATTACATATCT..........TATTTCTTTTTCTCTTTCCCCCAAG
22 EXON 22 38,190,395 38,190,493 0 0 99
GCTGCGGACATTCATGCGAGATACATTGAACTGCTTACGAGGTCTGGAGACTACTACAGA
TTCCTAAGTGAGATGCTGAAGAGTCTGGAAGATCTAAAG
INTRON 22 - 23 38,190,494 38,191,360 867
GTAATTCGTTTCCTTGAAGTTTTTT..........TGATTTCTGATTTTTATATCCACAG
23 EXON 23 38,191,361 38,191,858 0 0 498
CTGAAAAACACCAAGATTGAAGTTTTGGAAGAGGAGCTAAGACTGGCCCGGGATGCCAAC
TCGGAAAATTGCAATAAGAATAAGTTCCTAGATCAGAACCTGCAGAAATACCAGGCAGAG
TGTTCCCAGTTCAAGGCCAAGCTTGTGAGCCTGGAGGAGCTCAAGAGACAAGCTGAGCTC
GATGGAAAGTCAGCCAAGCAAAACCTAGACAAGTGCTACGGTCAGATCAAGGAACTCAAC
GAGAAGATCACCCGGCTGACCTATGAGATCGAAGATGAGAAGCGCCGGAGAAAGACTGTG
GAGGACAGGTTCGACCAACAGAAGAATGACTATGATCAACTGCAGAAGGCAAGGCAGTGT
GAGAAGGAGAACCTCGGCTGGCAGAAGCTGGAGTCTGAGAAAGCCATCAAGGAGAAGGAG
TACGAGATAGAGAGGTTGAGGGTTCTGCTGCAGGAAGAGGGCGCCCGGAAGAGAGAGTAT
GAAAATGAGCTGGCAAAG
INTRON 23 - 24 38,191,859 38,194,695 2,837
GTAAGAAACCACTATAATGAGGAGA..........TCTTTCTTTCTTTTTTGAATTCTAG
24 EXON 24 38,194,696 38,198,577 0 - 3,882
GCATCTAATAGGATCCAGGAGTCAAAGAGTCAGTGCACTCAAGTTGTTCAGGAGAGAGAG
AGCCTGCTGGTGAAGATCAAAGTCCTGGAGCAAGACAAGGCGAGGCTGCAGCGGCTGGAG
GATGAGCTGAACCGTGCCAAAGCAACGCTGGAGGCAGAAAGCCGGGTGAAACAGCGTCTG
GAGTGTGAGAAGCAGCAGATCCAGAACGACCTGAACCAGTGGAAAACTCAGTACTCCCGC
AAGGAGGAGACCATTAGGAAGATAGAGTCGGAAAGAGAGAAGAGCGAGCGAGAAAAGAAC
AGTCTCAGGAGTGAGATTGAGAGGCTCCAGGCGGAGATCAAGAGGATCGAAGAGAGATGC
AGGAGGAAGCTAGAGGATTCTTCTAGGGAGACTCAGTCCCAGCTGGAATCCGAACGCTGC
AGGCTTCAGAAGGAGATCGAGAAACTCAGGCAGCGCCCCTACGGGTCCCATCGGGAGACC
CAGACGGAGTACGAGTGGACCGTTGATTCCTCCACGCTGGTATTTGATGGGCTGAGGAAG
AAGGTGACGGCAATGCAGCTCTATGAGTGCCAGCTGATCGACAAGACGACGCTAGACAAG
CTGTTGAAGGGGAAGAAGTCAGTGGAGGAGGTGGCCTCAGAGATCCAGCCTTTCCTGCGC
GGCGCAGGCGCCATCGCCGGGGCTTCCGCTTCTCCCAAGGAAAAGTACTCTTTGGTGGAG
GCCAAGAGAAAGAAATTCATCACCCCAGAATCCACAGTCATGCTTCTGGAGGCCCAGGCA
GCCACCGGTGGTATCATCGATCCCCATCGGAATGAGAAGCTCACTGTGGACAATGCCGTA
GCCCGGGATCTCATCGACTTCGACGACCGCCAACAGATCTACACAGCGGAGAAAGCCATC
ACTGGTTTCGATGACCCGTTTTCGGGCAAGACGGTCTCTGTTTCAGAAGCCATCAAGAAG
AATTTGATCGACAGAGAAACCGGAATGCGCCTGCTGGAAGCCCAGCTTGCTTCGGGGGGT
GTAGTTGATCCAGTCAACAGTGTCTTCTTGCCAAAAGATGTCGCCTTGGCCCGTGGGCTG
ATTGATAGAGATTTGTATCGCTCCTTGAACGATCCCCGAGATAGTCAGAAGAACTTCGTG
GATCCAATCACCAAGAAGAAGGTCAGCTACATGCAGCTGAGAGAAAGGTGCAGAATTGAA
CCCCACACGGGTCTGCTCCTGCTGTCAGTACAGAAGAGAAGCATGTCCTTCCAAGGAATC
AGACAACCCGTGACCGTCACCGAACTGGTTGATTCTGGCATATTGAGACCATCCACTGTA
AACGAACTGGAATCCGGTCAGATTTCCTATGACGAGGTTGGGGAGAGAATCAAGGACTTC
CTCCAGGGTTCAAGCTGCATAGCAGGCATATATAATGAGACCACCAAGCAGAAGCTGGGC
ATCTATGAGGCCATGAAAATAGGCTTAGTTCGACCTGGTACCGCCCTGGAGTTGCTGGAA
GCCCAAGCAGCTACTGGCTTTATTGTGGATCCCGTCAGCAATTTAAGGCTACCTGTGGAG
GAAGCCTACAAGAGAGGTCTGGTGGGCATTGAGTTCAAAGAGAAGCTTCTGTCTGCGGAA
CGAGCCGTCACCGGCTACAACGATCCTGAGACCGGAAACATCATCTCTTTATTCCAAGCA
ATGAACAAGGAGCTCATCGAAAAGGGCCATGGCATTCGCTTGCTGGAGGCACAGATCGCA
ACCGGCGGCATCATCGACCCGAAGGAGAGCCATCGGTTACCGGTTGACATGGCGTATAAG
AGGGGTTATTTTAATGAGGAGCTTAGCGAAATCCTCTCAGACCCAAGTGATGATACCAAA
GGCTTTTTCGATCCAAACACTGAAGAAAACCTCACCTATCTGCAACTGAAGGAGAGATGC
ATCAAAGATGAGGAAACAGGGCTCTGCCTGCTGCCCCTGAAAGAGAAGAAGAAACAGGTG
CAGACTTCTCAGAAGAACACGCTCAGAAAGCGGCGGGTGGTCATAGTTGACCCGGAAACC
AATAAGGAGATGTCTGTTCAGGAGGCCTACAAGAAAGGTCTCATTGATTATGACACCTTC
AAGGAGCTATGTGAACAAGAGTGCGAATGGGAAGAAATAACCATCACAGGATCAGACGGC
TCCACCAGGGTGGTCCTAGTGGACAGGAAGACCGGCAGTCAGTATGACATTCAAGATGCT
ATTGACAAGGGCCTCGTTGACAGGAAGTTCTTCGATCAATACCTATCAGGCAGCCTTAGC
CTCACACAGTTTGCTGACATGATCTCCTTGAAAAACGGCGTCGGCAACAGCAGCGGCTTG
GGTGGGAGTGTCAACGATGATGTTTTTAGCAGCTCCCGACACGACTCCGTGAGTAAGATT
TCCACCATATCCAGTGTCAGAAATCTAACCATCCGAAGCAGCTCTCTGTCAGACCCTCTG
GAGGAGTCGAGCCCCATTGCGGCCATCTTTGACACAGAGAACCTGGAGAAAATCTCGATC
GCAGAAGGTATAGAGCGGGGCATTGTGGATAGCATCACCGGTCAGAGGCTTCTGGAGGCT
CAGGCCTGCACTGGTGGCATCATTCACCCTACCACTGGTCAGAAGCTCTCCCTTCAAGAT
GCAGTCAACCAGGGTCTCATTGACCAAGACATGGCCACCAGGCTGAAGCCTGCCCAGAAG
GCCTTCATCGGCTTTGAAGGGGTAAAAGGAAAGAAGAAGATGTCGGCAGCAGAGGCAGTC
AAAGAGAAATGGCTTCCCTACGAGGCAGGCCAGCGCTTCCTGGAGTTCCAGTTCCTCACG
GGAGGCCTTGTTGACCCGGAAGTGCATGGGAGGATCAGCACCGAAGAAGCCATCCGCAAA
GGTTTCATCGATGGCCGTGCAGCTCAGAGGTTGCAGGACATCAGCAGCTATGCCAAAATC
CTCACCTGCCCCAAAACCAAGTTAAAAATCTCCTACAAGGATGCCATGAATCGCTCCATG
GTGGAAGACATCACTGGGTTGCGCCTTCTGGAAGCCGCCTCCGTGTCCTCGAAGGGTTTG
CCTAGCCCTTATAACATGTCAGCCCCAGGCTCCCGCTCTGGTTCAAGGTCCGGATCTCGC
TCAGGCTCCCGCTCTGGCTCCCGCAGCGGGTCTCGGAGAGGAAGCTTCGATGCTACGGGC
AATTCTTCTTACTCCTATTCCTATTCATTTAGCAGTAGCTCCATTGGGGGGTACTAGTGG
TCAGAAGTAGTTACCGTACCTTAGGATCATTTGTATGTCTACTTTATCTTAACAAAGAAA
ACCTGGTGCTTGCAGTATAGCTGTAGAATTTTCTATGTTCAAGACGTAGCTGCAATAAAA
TCCCAGTAGTAAAGGCTCATTTAGCTCTGTAGCTTTCGGCTCAATTAATGTACTTCCTTA
TAGTGAATGAGAAGTGGTAGTCATTTGTAAGGATAGCACACATTGAATTTGGAATTTATT
TCTTCCATGTTTTGATCAATTCTCTGTAACTTTTCTTGGCTTATAAGGTCCAATTTCTGT
GTCTGGAGGTATAAAAAAATTACACTGACTACTGGTGGCTTAGTACTTTATGTTGTCTCT
CACCTAAATAGTTCCACTTTCTGCATTAGGAGAAAACTGCTCCCCTTCCCAAGTATTTTA
GTCCAAGTTTCCTTTAGTTTGAGAACATAGATTGTATCACCCATATATTCTTGAATACAC
TTGTTTGGTTTGGTATTACTTTGACTATGTCCACAATAGCAGCAATCTTGGCTTTTTGTT
AGCCGAGGTGTTCTGTTTATTTGGCTTGTCATTTTCCGTGTGCTTTAAAAAGGTGTTGTT
ATGAAGTTTGCTGTTCTGGCAATAAACTTGCAGACCTTGGAA
3' upstream sequence
GTGCTTGTGTTTTGATTTCTAATGCATTCATGCATACAAAGACATTTAATTGCTGATTTT
TATGTGTCGTAAAATCAGTCTAAATCTACTAAGGAACCTAATAAGAAAGCCCATCAAAAT
ACTAGTTGGGATTTTTGTTTTTAAAAAAGAGATGGTCTTCTACATTTAGTTTTTTCAACT
TAGCTCTTTGGAAAGAAACTAATGAGACTAGAGCATCCTAGCGACCAAAGCCCTGCTCTG
TCTTATTCTGGGTAATAAGTTTCAGAAGCACCAGCCAAAAGGATCACAGGACTGTGGCAA
GGAGGACTGTGGAAAGCCTCAAAATAAAAACTGTTGCATTTTATCCCTCAAAAGGAAAAA
CAAAATTGTTCTTGAATCTATGGAAAGGATCCCTGAAGAGTTCTTGGCTCTACACTGAAA
AATAAGGAATGATTTATTCTGCCCCCTGGTTTCACTTCATAATCCTTGCCTCCACTGCCT
CTGGGTGCATATTAAGGCAGAACCTCATGGCAGTGGGACAGATACCTTAGGGTGGGCAGG
AATGGGAGGGGAAATGGAAGGAAGAGACTGGCTCCTCGTGGTCTACTTCCTCTAGGCTCC
GCCCCCTAAAAATTTCAAGTCTTTCTAAGTAGCTCTACTTAGACCAAACCTTCTACATCC
AGCCTAAGGAAGACCTGTTGTGTCTGGTATTGGGCAAGGTACTGTGAGAATTCATTAGAA
ATTTACAAGTCCACCGACTACAAGACATTTGCAGTTTGGGTGGGGACAGGAGACACATAA
AACAATCAGCGGAACAATTTGCATCCATCAACATGAATTGCACAGAAAGATTTTGTCTAG
ATAAGATATAGAACAGCAAATAAATGCAGAACATCAAGAACAAGATCGGTTATACTATGC
TATTGGGGGCTTTTGGTACCAATTGAACGTTACCTTTATTTTCAATGAACAGGGCATTTT
TCCTTCATAGTGGCACTCTTTTCTCTCTCTCTCTCTCTCT..........

Sequence Detail Report

Gene Symbol (Gene ID) Dsp (ENSMUSG00000054889)
Transcript ID ENSMUST00000127906
SNP Information
Strain :
Sequence Retrieve :
Exon translate :
CDS Start ( 1 ) - End ( 2285 )
-
Strand : forward reverse
Show sequence : nucleotide amino acid
Color information