MoG+ -Mouse Genome database with high added value-

Target CDS Information

Gene Symbol (Gene ID)

Dek (ENSMUSG00000021377)

Cross Reference

EMBL	AC154171
GO	GO:0005634, GO:0042393, GO:0043292, ...show all
goslim_goa	GO:0003674, GO:0003723, GO:0005575, ...show all
MGI_trans_name	Dek-006
OTTP	OTTMUSP00000029853
OTTT	OTTMUST00000061021
UCSC	uc007qhw.2
UniParc	UPI0000021BB7
Uniprot/SPTREMBL	D3YVJ6
Vega_transcript	Dek-006, OTTMUST00000061021

Vega_translation

214423, OTTMUSP00000029853

Definition

protein_id:ENSMUSP00000114392
translation:

MSAAAAPAAEGEDAPVPPSSEKEPEMPGPREESEEEEEDDEDDDEEDEEEEKEKSLIVEG
KREKKKVERLTMQVSSLQREPFTVTQGKGQKLCEIERIHFFLSKKKPDELRNLHKLLYNR
PGTVSSLKKNVGQFSGFPFEKGSTQYKKKEEMLKKFRNAMLKSICEVLDLERSGVNSELV
KRILNFLMHPKPSGKPLPKSKKSSSKGSKKERNSSGTTRKSKQTKCPEILSDESSSDEDE
KKNKEESSEDEEKESEEE

Chromosome

Length
Position(start - end)

7,572
47,098,155 - 47,105,728

Orient to Chromosome

minus

Link

Location : (13:47098155-47105728)
/

Detail Map

name	Dek (ENSMUSG00000021377)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : Dek note : DEK oncogene (DNA binding) [Source:MGI Symbol;Acc:MGI:1926209]

name	Dek (ENSMUSG00000021377)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000021807

name	Dek (ENSMUSG00000021377)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000135278

name	Dek (ENSMUSG00000021377)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000129352

name	Dek (ENSMUSG00000021377) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS26490.1 Uniprot/SWISSPROT:Q7TNV0 RefSeq_peptide:NP_080176 RefSeq_mRNA:NM_025900.2 Vega_transcript:Dek-001 Vega_transcript:OTTMUST00000061016 UCSC:uc007qhw.2 Fantom:9030207I12 EMBL:AK033451 EMBL:BC048844 EMBL:BC055451 GO:GO:0003677 GO:GO:0005634 GO:GO:0005634 GO:GO:0016568 GO:GO:0042393 GO:GO:0042393 GO:GO:0043292 GO:GO:0044822 GO:GO:0044822 GO:GO:2000779 GO:GO:2000779 GO:GO:2001032 MGI_trans_name:Dek-001 Vega_translation:214421 Vega_translation:OTTMUSP00000029851 goslim_goa:GO:0003674 goslim_goa:GO:0003677 goslim_goa:GO:0003723 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005737 goslim_goa:GO:0008150 goslim_goa:GO:0042393 goslim_goa:GO:0043226 goslim_goa:GO:0051276 protein_id:AAH48844.1 protein_id:AAH55451.1 protein_id:BAC28296.1 OTTP:OTTMUSP00000029851 OTTT:OTTMUST00000061016 UniParc:UPI00001B62C8
definition	note : transcript_id=ENSMUST00000021807 protein_id : ENSMUSP00000021807 translation : MSAAAAPAAEGEDAPVPPSSEKEPEMPGPREESEEEEEDDEDDDEEDEEEEKEKSLIVEGKREKKKVERLTMQVSSLQREPFTVTQGKGQKLCEIERIHFFLSKKKPDELRNLHKLLYNRPGTVSSLKKNVGQFSGFPFEKGSTQYKKKEEMLKKFRNAMLKSICEVLDLERSGVNSELVKRILNFLMHPKPSGKPLPKSKKSSSKGSKKERNSSGTTRKSKQTKCPEILSDESSSDEDEKKNKEESSEDEEKESEEEQPPKKTSKKEKAKQKATAKSKKSVKSANVKKADSSTTKKNQKSSKKESESEDSSDDEPLIKKLKKPPTDEELKETVKKLLADANLEEVTMKQICKEVYENYPAYDLTERKDFIKTTVKELIS

name	Dek (ENSMUSG00000021377) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:Dek-002 Vega_transcript:OTTMUST00000061017 Uniprot/SPTREMBL:E9Q8Y1 UCSC:uc011yyz.1 EMBL:AC154171 GO:GO:0005634 GO:GO:0042393 GO:GO:0043292 GO:GO:0044822 GO:GO:2000779 GO:GO:2001032 MGI_trans_name:Dek-002 Vega_translation:214422 Vega_translation:OTTMUSP00000029852 goslim_goa:GO:0003674 goslim_goa:GO:0003723 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005737 goslim_goa:GO:0008150 goslim_goa:GO:0042393 goslim_goa:GO:0043226 OTTP:OTTMUSP00000029852 OTTT:OTTMUST00000061017 UniParc:UPI00015AA07F
definition	note : transcript_id=ENSMUST00000135278 protein_id : ENSMUSP00000121663 translation : MSAAAAPAAEGEDAPVPPSSEKEPEMPGPREESEEEEEDDEDDDEEDEEEEKEKSLIVEGKREKKKVERLTMQVSSLQREPFTVTQGKGQKLCEIERIHFFLSKKKPDELRNLHKLLYNRPGTVSSLKKNVGQFSGFPFEKGSTQYKKKEEMLKKFRNAMLKSICEVLDLERSGVNSELVKRILNFLMHPKPSGKQPPKKTS

name	Dek (ENSMUSG00000021377) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:Dek-006 Vega_transcript:OTTMUST00000061021 Uniprot/SPTREMBL:D3YVJ6 UCSC:uc007qhw.2 EMBL:AC154171 GO:GO:0005634 GO:GO:0042393 GO:GO:0043292 GO:GO:0044822 GO:GO:2000779 GO:GO:2001032 MGI_trans_name:Dek-006 Vega_translation:214423 Vega_translation:OTTMUSP00000029853 goslim_goa:GO:0003674 goslim_goa:GO:0003723 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005737 goslim_goa:GO:0008150 goslim_goa:GO:0042393 goslim_goa:GO:0043226 OTTP:OTTMUSP00000029853 OTTT:OTTMUST00000061021 UniParc:UPI0000021BB7
definition	note : transcript_id=ENSMUST00000129352 protein_id : ENSMUSP00000114392 translation : MSAAAAPAAEGEDAPVPPSSEKEPEMPGPREESEEEEEDDEDDDEEDEEEEKEKSLIVEGKREKKKVERLTMQVSSLQREPFTVTQGKGQKLCEIERIHFFLSKKKPDELRNLHKLLYNRPGTVSSLKKNVGQFSGFPFEKGSTQYKKKEEMLKKFRNAMLKSICEVLDLERSGVNSELVKRILNFLMHPKPSGKPLPKSKKSSSKGSKKERNSSGTTRKSKQTKCPEILSDESSSDEDEKKNKEESSEDEEKESEEE

name
type	misc_feature
link
xref
definition	note : contig AC154171.5 1..173300(-1)

name	Dek (ENSMUSG00000021377)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000061018 Vega_transcript:OTTMUST00000061018 MGI_trans_name:Dek-003 OTTT:OTTMUST00000061018
definition	note : processed_transcript note : transcript_id=ENSMUST00000138401

name	Dek (ENSMUSG00000021377)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000061020 Vega_transcript:OTTMUST00000061020 MGI_trans_name:Dek-005 OTTT:OTTMUST00000061020
definition	note : processed_transcript note : transcript_id=ENSMUST00000143933

name	Dek (ENSMUSG00000021377)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000061019 Vega_transcript:OTTMUST00000061019 MGI_trans_name:Dek-004 OTTT:OTTMUST00000061019
definition	note : processed_transcript note : transcript_id=ENSMUST00000150652

Polymorphisms Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Dek (ENSMUSG00000021377)
Transcript ID	ENSMUST00000129352

Reports
substitution
cSNPs	5
Insertion	17
Deletion	25
SNPs	+1kb 47105838(c.-110A>G), 47105839(c.-111C>G), 47105899(c.-171A>G), 47106114(c.-386C>A), 47106343(c.-615G>A), 47106401(c.-673G>A), 47106595(c.-867C>T), 47106619(c.-891T>C), 47106696(c.-968C>T), 47106763(c.-1035G>A), 47107108(c.-1380G>T), 47107250(c.-1522G>T), 47107304(c.-1576A>G), 47107519(c.-1791T>C), 47107601(c.-1873G>A), 47107602(c.-1874C>T), 47107673(c.-1945T>G), 47107678(c.-1950A>G), 47107701(c.-1973C>T), 47107790(c.-2062C>T), 47107948(c.-2220T>C), 47107961(c.-2233C>T), 47108150(c.-2422T>A), 47108224(c.-2496C>T), 47109018(c.-3290C>T), 47109035(c.-3307A>C), 47109036(c.-3308G>T), 47109219(c.-3491C>T), 47109277(c.-3549G>A), 47109370(c.-3642C>G), 47109641(c.-3913G>A), 47109892(c.-4164A>C), 47110628(c.-4900T>C), 47110667(c.-4939G>T), 47110717(c.-4989G>A), 5'UTR CDS 47098185(c.744G>A), 47098272(c.657G>A), 47098278(c.651A>G), 47105600(c.129T>C), 47105657(c.72C>G), 3'UTR INTRON 47098503(c.586-160T>C), 47098530(c.586-187C>T), 47098553(c.586-210T>C), 47098588(c.586-245C>A), 47099583(c.465-120A>G), 47099711(c.465-248G>A), 47099918(c.464+256C>G), 47099998(c.464+176G>A), 47100068(c.464+106G>A), 47100070(c.464+104C>G), 47100085(c.464+89T>C), 47100330(c.370-62C>T), 47100349(c.370-81G>A), 47100378(c.370-110G>T), 47100417(c.370-149T>C), 47100810(c.370-542A>G), 47100848(c.370-580A>G), 47100952(c.369+671G>C), 47101016(c.369+607G>A), 47101228(c.369+395G>T), 47101306(c.369+317C>T), 47101345(c.369+278T>C), 47101396(c.369+227C>T), 47101893(c.259+80C>A), 47102095(c.158-21G>A), 47102148(c.158-74A>G), 47102195(c.158-121A>G), 47102203(c.158-129G>A), 47102207(c.158-133T>C), 47102462(c.158-388C>A), 47102486(c.158-412T>C), 47102492(c.158-418C>T), 47102647(c.158-573T>C), 47102818(c.158-744T>C), 47102892(c.158-818A>G), 47103051(c.158-977C>G), 47103110(c.158-1036C>A), 47103136(c.158-1062A>G), 47103265(c.158-1191A>G), 47103344(c.158-1270T>C), 47103358(c.158-1284A>G), 47103494(c.158-1420C>T), 47103546(c.158-1472C>T), 47103611(c.158-1537G>A), 47103645(c.158-1571G>T), 47103783(c.158-1709C>T), 47103941(c.157+1631A>G), 47103990(c.157+1582A>G), 47103992(c.157+1580A>G), 47104235(c.157+1337A>G), 47104273(c.157+1299C>T), 47104339(c.157+1233T>C), 47104356(c.157+1216A>G), 47104413(c.157+1159G>A), 47104432(c.157+1140G>A), 47104560(c.157+1012G>T), 47104653(c.157+919A>G), 47104670(c.157+902C>T), 47104688(c.157+884T>C), 47104922(c.157+650A>G), 47105108(c.157+464T>C), 47105183(c.157+389G>A), 47105271(c.157+301T>C), 47105483(c.157+89A>G), 47105493(c.157+79C>T), 47105525(c.157+47T>C), -1kb 47093353(c.4802C>T), 47093627(c.4528T>G), 47093632(c.4523A>T), 47093645(c.4510G>A), 47093665(c.4490T>C), 47093745(c.4410G>T), 47094186(c.3969T>A), 47094187(c.3968T>A), 47094275(c.3880A>G), 47094303(c.3852C>G), 47094361(c.3794T>C), 47094756(c.3399G>A), 47094777(c.3378C>T), 47094977(c.3178C>G), 47094979(c.3176T>C), 47095065(c.3090C>T), 47095148(c.3007G>A), 47095173(c.2982G>A), 47095187(c.2968T>C), 47095265(c.2890G>A), 47095558(c.2597A>G), 47095646(c.2509T>C), 47096117(c.2038C>A), 47096158(c.1997G>A), 47096219(c.1936T>G), 47096223(c.1932T>C), 47096399(c.1756T>C), 47096498(c.1657C>T), 47096542(c.1613A>G), 47096684(c.1471T>A), 47096845(c.1310C>G), 47096891(c.1264G>A), 47096980(c.1175T>C), 47097024(c.1131G>A), 47097083(c.1072C>T), 47097225(c.930A>G), 47097250(c.905A>G), 47097362(c.793A>G), 47097376(c.779T>A), 47097497(c.658G>T), 47097766(c.389T>C), 47097841(c.314A>G),
Insertions	+1kb 47106996 (c.-1269_-1268insT), 47109348 (c.-3621_-3620insAC), 47109750 (c.-4023_-4022insA), 47109758 (c.-4031_-4030insA), 5'UTR CDS 3'UTR INTRON 47098735 (c.586-393_586-392insG), 47100512 (c.370-245_370-244insT), 47101066 (c.369+556_369+557insC), 47101804 (c.260-73dupG), 47104493 (c.157+1078_157+1079insCC), 47104761 (c.157+810_157+811insT), 47104988 (c.157+583dupA), -1kb 47094173 (c.3981_3982insAT), 47094299 (c.3855_3856insG), 47094305 (c.3849_3850insG), 47095902 (c.2250_2252dupTTT), 47095906 (c.2246_2248dupTTT), 47097699 (c.453_455dupGTT),
Deletions	+1kb 47106328 (c.-601delC), 47107207 (c.-1480delA), 47109694 (c.-3968_-3967delCT), 47110597 (c.-4873_-4870delGTGT), 5'UTR CDS 3'UTR INTRON 47098886 (c.585+456delT), 47099070 (c.585+270_585+272delTGC), 47099470 (c.465-9_465-8delCT), 47100287 (c.370-27_370-20delAGTAGCAT), 47100530 (c.370-263delA), 47100536 (c.370-269delA), 47103560 (c.158-1493_158-1487delGACTTGG), 47104209 (c.157+1361_157+1362delTT), 47104761 (c.157+808_157+810delTTC), 47104769 (c.157+802delT), 47104774 (c.157+795_157+797delTTC), 47105376 (c.157+187_157+195delTTTTTTTTT), -1kb 47093241 (c.4908_4913delATTTTT), 47094013 (c.4141delT), 47094276 (c.3873_3878delTCTCTA), 47094456 (c.3697_3698delGG), 47094841 (c.3310_3313delAAAC), 47094931 (c.3215_3223delGATAAAGAT), 47095830 (c.2315_2324delACTCTGTGTG), 47097942 (c.212delA),
coding sequence substitutions
premature termination by the nucleotide substitution	0
synonymous num	5
non-synonymous num	0
synonymous substitutions	47098185 (p.Ser248Ser), 47098272 (p.Arg219Arg), 47098278 (p.Thr217Thr), 47105600 (p.Asp43Asp), 47105657 (p.Pro24Pro),
non-synonymous substitutions
B6 transcript (ENSMUST00000129352)	MSAAAAPAAEGEDAPVPPSSEKEPEMPGPREESEEEEEDDEDDDEEDEEEEKEKSLIVEG KREKKKVERLTMQVSSLQREPFTVTQGKGQKLCEIERIHFFLSKKKPDELRNLHKLLYNR PGTVSSLKKNVGQFSGFPFEKGSTQYKKKEEMLKKFRNAMLKSICEVLDLERSGVNSELV KRILNFLMHPKPSGKPLPKSKKSSSKGSKKERNSSGTTRKSKQTKCPEILSDESSSDEDE KKNKEESSEDEEKESEEE
MSMv4 transcript	MSAAAAPAAEGEDAPVPPSSEKEPEMPGPREESEEEEEDDEDDDEEDEEEEKEKSLIVEG KREKKKVERLTMQVSSLQREPFTVTQGKGQKLCEIERIHFFLSKKKPDELRNLHKLLYNR PGTVSSLKKNVGQFSGFPFEKGSTQYKKKEEMLKKFRNAMLKSICEVLDLERSGVNSELV KRILNFLMHPKPSGKPLPKSKKSSSKGSKKERNSSGTTRKSKQTKCPEILSDESSSDEDE KKNKEESSEDEEKESEEE
homology	100.00 (258 / 258)

Exon Detail Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Dek (ENSMUSG00000021377)
Transcript ID	ENSMUST00000129352


..........TCTGCATTATAGGGGAGACCAAGGGGGCTAGAGAAAGGAAGAGGGTGAAT
CTGTCTAACATTCACCGATTTGAAACCTATTTATGTCGCTGGTGGTGTGAGCACTTAACG
TGGTGGGTCCCTGTCACGGTGCAGTGTACCGGCGACGGGAAGCCTCGCAAGTAGGTCTCA
TTTGGAAGCCTTCATCTCGAACGACCCCTCGGAAACAAACGCGGTGGCTCCGAATCAACC
CCGTCTGCGGGGTGATCGCCGCGTGAAGTCGAGTCGAGAAAGACTTCGGCGGATCCCTCA
ACTTCGTCACCTCCAGACGCTCCCCGGCTCCGCGGCCCAGGACGGCCGGTCATTTTTCTC
CCGGGATCGGGAGGCTGGAAGCTCGCAGGCCCCCTAGCGTCCAACCGTTCAGCGCGGAGG
CCCCGGCTCGCGCCCGCCCACCACCCCGTGCACCCACCCAGCCACCCGCCGGACGCCGCG
ACCCGGGTCCTCCCGCGAACCGCAGACCCCCCGAGACCCCGCCCGGGCAGCCCGCGAGAG
ACGCCGCCGCCCCGCCTCCCGCCCGCCCTCCCGCGCGCGCCAACTCCCAGCGCCGCGCGC
TGATTGGCCGGCGCCTTCCCGCTCTGCTTCCCGAACCGCCATTTTGAAAATCTTGTTGAT
TCTGAGGAGCGGGGAGAGAGAGAGCGCGAGAGAGAGCGAGCGCGCGGCGCGAGGACCTCG
GCCCCGAGCGACTTCTACACAGCGGCGGCCTTCTCGTGCGCACCCGCGGTGAGGACGGCG
GCGGGGAGGCGCCGGGGCAGCGGGGAGGGGACGCGGCCAGAAGCACTGAGGCCCGCCGCG
GGGGAGGGGACTCGCAAGGCTCGGCTCGCCTGGGCCACACTGGCCGGGCCCGAGCCGGCC
CGGGGCGGCGCAGGCCGGGCGGGAGCGCGCGCGGGCGGCTGGGAGGGCGGTGCGGTTTCC
CGCCTCGGGCATCCCCGGGGAGGCGGGCCGAGTGACAGACCGGGGGTAGG
CGACTTGGAGGGGAGCTGACGCTGGGCGCTCGGCACGCTCCATGCCCGCGCGAGCGAGAGAACCGAAGCGTGCGGCTTCCTCCCCGCCCGCAGGCCCCCAGCATGTCGGCGGCGGCGGCCCCCGCTGCGGAGGGAGAGGACGCCCCCGTGCCGCCCTCATCCGAGAAGGAACCGGAGATGCCGGGTCCCAGGGAAGAGAGTGAGGAGGAGGAGGAGGATGACGAAGACGACGATGAAGAGGACGAGGAGGAAGAAAAAG
GTGGGTGGGCAGGGATACGCATCCC..........ATATATAAGAATTATTAATTTCTAG
AAAAGAGTCTTATCGTGGAAGGCAAGAGAGAGAAGAAGAAAGTAGAGAGACTGACGATGCAAGTGTCTTCCTTACAGAGAGAGCCATTTACAGTGACACAAG
GTGAGTGCATATTGCTTTTATGGGA..........TTAATTGTGATATTTTGCTTTTCAG
GGAAGGGTCAGAAACTTTGTGAAATTGAAAGGATACATTTCTTTCTGAGTAAGAAAAAACCAGATGAACTTAGAAATCTACACAAACTGCTTTACAACAGGCCGGGCACA
GTAAGACATTTGATAAACATCTCTA..........TAGCATTAACAATAAACATTTTCAG
GTGTCCTCGTTGAAGAAGAACGTGGGTCAGTTCAGTGGCTTTCCATTCGAAAAAGGCAGTACCCAGTATAAAAAGAAGGAAGAAATGTTGAAAAA
GTAAGTTACTTTTGTAACTACTGTG..........CCTTGTTCCCTGCTTCCTGTTTCAG
GTTTCGAAATGCCATGTTAAAGAGCATCTGTGAGGTTCTTGATTTAGAGAGGTCAGGCGTGAACAGCGAACTCGTGAAGAGGATCTTGAACTTCTTAATGCATCCAAAGCCTTCTGGCAAA
GTAAGGGCCACTCTTTACCTTCCAA..........GTCAATGAATTTTTATATACTGCAG
CCATTACCAAAATCCAAAAAATCTTCCAGCAAAGGTAGTAAAAAGGAACGGAACAGTTCTGGAACGACAAGAAAGTCAAAGCAAACTAAATGCCCTGAAATTCTGTCAGATGAGTCTAGTAGTGATGAAGATGAGAAGAAAAATAAGGAAGAGTCTTCAGAAGATGAAGAGAAAGAAAGTGAAGAGGAG
GTAAAGTGTTTTAAGCTGTTGTTTTCAATCAGAAGCTATTTTGTTTTATAAACAAGTAAA
TAGTTTGGTTATTTTTTTAATTGTGAAAATATATAAATAATTGAGTAGGCTTATATCTTC
CCATTAAACATTTAACAGTTTAAGAACGGTTGAGTTTGTAATCTGAATTTGAAGTGGGCC
TTGAGCTAGCTCTCACCGTATAGGGTGGGGAATGGGAAAGGAAGCAGCAGAGGATCGGAT
TCTGCACGTGCGTCTGTGCACCACATGCATTTCTGGTGCCTACAGAGACCGGAAGGGGCA
TCAGGGTCCCCTGGAGCTGGAGTTATCTATGACTGAGTCCCACCCACCATGTGGGTGCTA
AGAATTGAATTTGGATCTCTTGGATGAGCAGCCAGTACTCTTAACCACTGAGCCATCTCC
AGCCTATGGGAGCACATTCTTAAGGGTTTGTTGTTTTTTCTTAATATATTAATATTTTAT
AATTGACTTGGTGCAAAAAGTAAAATGTTAAAGGTTGTCATTTTCTCCCCAACCTTTTGG
GAATTATTTAATGAATGCAATAGCATTTGAAGTTTATGTCATTTAGAAATAGAACATTTT
TTATTTGTAAAATGCTTCCAGAGTGCATACTAGGTGGGAGGAAAACTGTCATTTAAGTAA
TTTAGCTTTTGCTCTATTTTCAGTCAAAGTCTGGGAAGGGAGGTACAGGAGGTGAATTCC
TGTTGTTGATGGTGATTTGTGTGTTTTGTTGATTTGTTTTCTTCAGAGATTAGACTTAAT
TTATAAATGTATGTAGAAGTATCTAGGCTTATTTAATCCTGGATTGACATTGTAGTCTTA
CTTCCTTCTTGTGGGAAGCAACCACATAATTGTGATATCCAAAAAAGTCTCTAAACAATA
ATAGGTGTCCCTTGTATAGACAATAATAGGTGTCCCTTGTATAGACAATAATAGGTGTCC
CTTGTATAGTAGAGAGGATGCTTTTCATCTCCTGAACACC..........

No.	Exon / Intron	Start	End	Start Phase	End Phase	Length	Sequence
	5' upstream sequence						..........TCTGCATTATAGGGGAGACCAAGGGGGCTAGAGAAAGGAAGAGGGTGAAT CTGTCTAACATTCACCGATTTGAAACCTATTTATGTCGCTGGTGGTGTGAGCACTTAACG TGGTGGGTCCCTGTCACGGTGCAGTGTACCGGCGACGGGAAGCCTCGCAAGTAGGTCTCA TTTGGAAGCCTTCATCTCGAACGACCCCTCGGAAACAAACGCGGTGGCTCCGAATCAACC CCGTCTGCGGGGTGATCGCCGCGTGAAGTCGAGTCGAGAAAGACTTCGGCGGATCCCTCA ACTTCGTCACCTCCAGACGCTCCCCGGCTCCGCGGCCCAGGACGGCCGGTCATTTTTCTC CCGGGATCGGGAGGCTGGAAGCTCGCAGGCCCCCTAGCGTCCAACCGTTCAGCGCGGAGG CCCCGGCTCGCGCCCGCCCACCACCCCGTGCACCCACCCAGCCACCCGCCGGACGCCGCG ACCCGGGTCCTCCCGCGAACCGCAGACCCCCCGAGACCCCGCCCGGGCAGCCCGCGAGAG ACGCCGCCGCCCCGCCTCCCGCCCGCCCTCCCGCGCGCGCCAACTCCCAGCGCCGCGCGC TGATTGGCCGGCGCCTTCCCGCTCTGCTTCCCGAACCGCCATTTTGAAAATCTTGTTGAT TCTGAGGAGCGGGGAGAGAGAGAGCGCGAGAGAGAGCGAGCGCGCGGCGCGAGGACCTCG GCCCCGAGCGACTTCTACACAGCGGCGGCCTTCTCGTGCGCACCCGCGGTGAGGACGGCG GCGGGGAGGCGCCGGGGCAGCGGGGAGGGGACGCGGCCAGAAGCACTGAGGCCCGCCGCG GGGGAGGGGACTCGCAAGGCTCGGCTCGCCTGGGCCACACTGGCCGGGCCCGAGCCGGCC CGGGGCGGCGCAGGCCGGGCGGGAGCGCGCGCGGGCGGCTGGGAGGGCGGTGCGGTTTCC CGCCTCGGGCATCCCCGGGGAGGCGGGCCGAGTGACAGACCGGGGGTAGG
1	EXON 1	47,105,572	47,105,830	-	1	259	CGACTTGGAGGGGAGCTGACGCTGGGCGCTCGGCACGCTCCATGCCCGCGCGAGCGAGAG AACCGAAGCGTGCGGCTTCCTCCCCGCCCGCAGGCCCCCAGCATGTCGGCGGCGGCGGCC CCCGCTGCGGAGGGAGAGGACGCCCCCGTGCCGCCCTCATCCGAGAAGGAACCGGAGATG CCGGGTCCCAGGGAAGAGAGTGAGGAGGAGGAGGAGGATGACGAAGACGACGATGAAGAG GACGAGGAGGAAGAAAAAG
	INTRON 1 - 2	47,102,075	47,105,571			3,497	GTGGGTGGGCAGGGATACGCATCCC..........ATATATAAGAATTATTAATTTCTAG
2	EXON 2	47,101,973	47,102,074	1	1	102	AAAAGAGTCTTATCGTGGAAGGCAAGAGAGAGAAGAAGAAAGTAGAGAGACTGACGATGC AAGTGTCTTCCTTACAGAGAGAGCCATTTACAGTGACACAAG
	INTRON 2 - 3	47,101,733	47,101,972			240	GTGAGTGCATATTGCTTTTATGGGA..........TTAATTGTGATATTTTGCTTTTCAG
3	EXON 3	47,101,623	47,101,732	1	0	110	GGAAGGGTCAGAAACTTTGTGAAATTGAAAGGATACATTTCTTTCTGAGTAAGAAAAAAC CAGATGAACTTAGAAATCTACACAAACTGCTTTACAACAGGCCGGGCACA
	INTRON 3 - 4	47,100,269	47,101,622			1,354	GTAAGACATTTGATAAACATCTCTA..........TAGCATTAACAATAAACATTTTCAG
4	EXON 4	47,100,174	47,100,268	0	2	95	GTGTCCTCGTTGAAGAAGAACGTGGGTCAGTTCAGTGGCTTTCCATTCGAAAAAGGCAGT ACCCAGTATAAAAAGAAGGAAGAAATGTTGAAAAA
	INTRON 4 - 5	47,099,464	47,100,173			710	GTAAGTTACTTTTGTAACTACTGTG..........CCTTGTTCCCTGCTTCCTGTTTCAG
5	EXON 5	47,099,343	47,099,463	2	0	121	GTTTCGAAATGCCATGTTAAAGAGCATCTGTGAGGTTCTTGATTTAGAGAGGTCAGGCGT GAACAGCGAACTCGTGAAGAGGATCTTGAACTTCTTAATGCATCCAAAGCCTTCTGGCAA A
	INTRON 5 - 6	47,098,344	47,099,342			999	GTAAGGGCCACTCTTTACCTTCCAA..........GTCAATGAATTTTTATATACTGCAG
6	EXON 6	47,098,155	47,098,343	0	-	189	CCATTACCAAAATCCAAAAAATCTTCCAGCAAAGGTAGTAAAAAGGAACGGAACAGTTCT GGAACGACAAGAAAGTCAAAGCAAACTAAATGCCCTGAAATTCTGTCAGATGAGTCTAGT AGTGATGAAGATGAGAAGAAAAATAAGGAAGAGTCTTCAGAAGATGAAGAGAAAGAAAGT GAAGAGGAG
	3' upstream sequence						GTAAAGTGTTTTAAGCTGTTGTTTTCAATCAGAAGCTATTTTGTTTTATAAACAAGTAAA TAGTTTGGTTATTTTTTTAATTGTGAAAATATATAAATAATTGAGTAGGCTTATATCTTC CCATTAAACATTTAACAGTTTAAGAACGGTTGAGTTTGTAATCTGAATTTGAAGTGGGCC TTGAGCTAGCTCTCACCGTATAGGGTGGGGAATGGGAAAGGAAGCAGCAGAGGATCGGAT TCTGCACGTGCGTCTGTGCACCACATGCATTTCTGGTGCCTACAGAGACCGGAAGGGGCA TCAGGGTCCCCTGGAGCTGGAGTTATCTATGACTGAGTCCCACCCACCATGTGGGTGCTA AGAATTGAATTTGGATCTCTTGGATGAGCAGCCAGTACTCTTAACCACTGAGCCATCTCC AGCCTATGGGAGCACATTCTTAAGGGTTTGTTGTTTTTTCTTAATATATTAATATTTTAT AATTGACTTGGTGCAAAAAGTAAAATGTTAAAGGTTGTCATTTTCTCCCCAACCTTTTGG GAATTATTTAATGAATGCAATAGCATTTGAAGTTTATGTCATTTAGAAATAGAACATTTT TTATTTGTAAAATGCTTCCAGAGTGCATACTAGGTGGGAGGAAAACTGTCATTTAAGTAA TTTAGCTTTTGCTCTATTTTCAGTCAAAGTCTGGGAAGGGAGGTACAGGAGGTGAATTCC TGTTGTTGATGGTGATTTGTGTGTTTTGTTGATTTGTTTTCTTCAGAGATTAGACTTAAT TTATAAATGTATGTAGAAGTATCTAGGCTTATTTAATCCTGGATTGACATTGTAGTCTTA CTTCCTTCTTGTGGGAAGCAACCACATAATTGTGATATCCAAAAAAGTCTCTAAACAATA ATAGGTGTCCCTTGTATAGACAATAATAGGTGTCCCTTGTATAGACAATAATAGGTGTCC CTTGTATAGTAGAGAGGATGCTTTTCATCTCCTGAACACC..........

Sequence Detail Report

Gene Symbol (Gene ID)	Dek (ENSMUSG00000021377)
Transcript ID	ENSMUST00000129352

		SNP Information
Strain :
Sequence Retrieve :
Exon translate : CDS Start ( 1 ) - End ( 258 ) -
Strand :	forward reverse
Show sequence :	nucleotide amino acid
Color information