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Target CDS Information

Gene Symbol (Gene ID) Zfp451 (ENSMUSG00000042197)
Cross Reference
EMBL AC163668
GO GO:0008150
goslim_goa GO:0008150
MGI_trans_name Zfp451-002
OTTP OTTMUSP00000062963
OTTT OTTMUST00000051954
UCSC uc007anz.2
UniParc UPI0002A4780C
Uniprot/SPTREMBL M0QWT6
Vega_transcript OTTMUST00000051954, Zfp451-002
Vega_translation 178890, OTTMUSP00000062963
Definition protein_id:ENSMUSP00000137992
translation:
MGDPGPEIIESVPPAGPEASESTTDENEDDIQFVSEGPLRPVLEYIDLVSSDDEEPSTSH
SDDSEQMQLILEQKDHSNVEAGCGGLRSQFCVL

Chromosome 1
Length
Position(start - end)
31,261
33,783,096 - 33,814,358
Orient to Chromosome minus
Link Location : (1:33783096-33814358)
/

Detail Map


 

Report

Polymorphisms Report

Target Strain  MSMv4  JF1v3  KJRv1  SWNv1  CHDv1  NJLv1  BLG2v1  HMIv1  BFMv1  PGN2v1
Gene Symbol (Gene ID) Zfp451 (ENSMUSG00000042197)
Transcript ID ENSMUST00000139143
Reports
substitution
cSNPs0
Insertion40
Deletion48
SNPs
+1kb
5'UTR
CDS
3'UTR
INTRON
-1kb
Insertions
+1kb
5'UTR
CDS
3'UTR
INTRON
-1kb
Deletions
+1kb
5'UTR
CDS
3'UTR
INTRON
-1kb
coding sequence substitutions
premature termination by the nucleotide substitution0
synonymous num0
non-synonymous num0
synonymous substitutions
non-synonymous substitutions
B6 transcript
(ENSMUST00000139143)
MGDPGPEIIESVPPAGPEASESTTDENEDDIQFVSEGPLRPVLEYIDLVSSDDEEPSTSH
SDDSEQMQLILEQKDHSNVEAGCGGLRSQFCVL*
MSMv4 transcript
MGDPGPEIIESVPPAGPEASESTTDENEDDIQFVSEGPLRPVLEYIDLVSSDDEEPSTSH
SDDSEQMQLILEQKDHSNVEAGCGGLRSQFCVL*
homology100.00 (94 / 94)

Exon Detail Report

Target Strain  MSMv4  JF1v3  KJRv1  SWNv1  CHDv1  NJLv1  BLG2v1  HMIv1  BFMv1  PGN2v1
Gene Symbol (Gene ID) Zfp451 (ENSMUSG00000042197)
Transcript ID ENSMUST00000139143
No. Exon / Intron Start End Start Phase End Phase Length Sequence
5' upstream sequence
..........CCTGGGATTTAGCTGCTTTTACTTTCCCGCTGAACTCTGTACTCTAGCTT
TACTCCTTGCTCCTCTCTCTGGTCCTTGAGTGAGACTGAATACTTACTAGCACCGGGAGA
TAGAAAACATGAGAGAGATTGAGTAGCTCAAGTGCTTCAGGTCTTGGACTTCACTTAAAC
CTATCCATCCATCTATCGATCCATCCTTCCTTCTGGCCCGAAACAAAGACCACTGAGCAT
TGCTTTCATAGCAGTATGATCACTAAAGGTCTGAAAGGGTTAACTGACATTACTAGGACT
GTTTTGCCCACACCTCTGTGTTCCACTCTCCAAGTAATTAACCTATCCACTCAACCTAGC
CTGAAAAGAACTAGGGAGAAACAGGAAAGGCTAGGGGCAGCCCTCTGGAACCTTATCAGT
AATGCTACTTTTAGTTTACAGGAACCTGTGGACAACAAGGAAGCCCCTTTGTGAGACTTC
TGCGAGAATTAATGACCTCTCAGGAATGCCATATATAAGCTCTTGCCCTTGCTTTGCCAA
GATGTAATTGGGAGGAAAAAGTCTTCCATGTTTTCATCTGCCTTGCTTGTTGCCAGTGGG
GCTCTTTTCCTGTCAGTGTCTCTAAGTGAAAGGCGGCAGCGGAACGAGAATTGGCGTGGA
CTCAAAACTACATCAAGACCCTCACCACCTCCTCCTGCCATCTTCCGGAGATGCAGATGA
GCGCCGAGCTCCGGATCCTCACCACCTTTCCCCGCCACGCGGTCGTCAGCCTCGAGACCG
GCGGAAACTACGACTCCCAGAATCCCTCGCGGGGCGGGAGGAAGGCGGGGAGCGTACAAA
GCGGCGCTGGAAGCTAGCGGCAGTGAGGCCGCGCTTGGGGTCCGGCAGCTTGGCGTCCCC
GCGGCCTGAGGCGTCAGCTGCGTGGGCGCTCACGCAGGGCGGGTCGCGCGGCGCCGGGCG
AGAGGGAAGTCGTGGCGGCGGCGTCGGGAACAGCAGCGGCGGCGGCGGGA
1 EXON 1 33,814,338 33,814,385 - 0 48
GCGTGGTGCTGACAGGCCGTGGGAGAAATGGGAGACCCAGGGCCGGAG
INTRON 1 - 2 33,813,811 33,814,337 527
GTGAGTGGTGGCGGCCCGGGCCTTG..........AGCGTGTTTTGGCTTTTGTTTATAG
2 EXON 2 33,813,727 33,813,810 0 0 84
ATAATAGAATCTGTCCCACCAGCTGGGCCCGAGGCATCAGAGTCTACCACGGATGAAAAC
GAAGATGACATTCAGTTTGTTAGT
INTRON 2 - 3 33,805,420 33,813,726 8,307
GTAAGTAGAGACAGACAATCGCGGT..........TGAATTTCCTCAATTTCTTTCATAG
3 EXON 3 33,805,339 33,805,419 0 0 81
GAAGGACCGTTAAGACCCGTTTTGGAATACATTGATCTAGTCAGCAGTGATGATGAAGAG
CCTAGTACCTCTCACAGTGAT
INTRON 3 - 4 33,783,192 33,805,338 22,147
GTAAGTACATTTCATTTGATCTCAT..........ACTAGGAATTTATATTATGATGTAG
4 EXON 4 33,783,041 33,783,191 0 - 151
GACTCAGAACAAATGCAGCTAATTCTGGAACAAAAAGATCATTCCAACGTGGAGGCAGGA
TGTGGAGGTCTGAGAAGCCAATTTTGTGTCCTATAATGCACTGTAACAAGGAATTTGACA
ATGGGCACCTTCTGTTGGGACATTTGAAAAG
INTRON 4 - 5 33,782,195 33,783,040 846
GTAAGCAGGGCACTCTGGATTCAAA..........TGATGGCACTTCTTTCCTTGTATAG
5 EXON 5 33,782,068 33,782,194 - - 127
GTTTGATCACTCCCCATGTGATCCCACAATTACGTTACATGGACCTCTGGCTAATTCGTT
TGCATGTGCAGTGTGCTATGAACATTTCGTTACTCAACAGCAGTACAAGGACCATCTTCT
CTCCAGG
INTRON 5 - 6 33,780,050 33,782,067 2,018
GTAAGAGCATGCTCTGGGAATAGAT..........GACGTGGCTTTCCTTTTTATTTTAG
6 EXON 6 33,779,896 33,780,049 - - 154
ACAGCTGCAGCCGATGGACATAGCAATAGCCTTCTTCCTCAGATTATTCAATGTTATGCT
TGTCCACAGTGCTTTCTTTTGTTTAGCACCAAGGATGAGTGTTTGAAGCATATGTCTACA
AAGAATCATTTCCATCAGAGCTTTAAACTGAGTG
INTRON 6 - 7 33,779,192 33,779,895 704
GTATGTTTAATATATTGCTGCTAAC..........ATTTGTGGTTCATTTTCTCTTTTAG
7 EXON 7 33,779,044 33,779,191 - - 148
ATAATAAAGGAACGGCCCGCCCAATATCATTTCCATCTTTTGCAAAGAAGCGTTTGGTCT
CTCTGTGCAAAGATGTTCCATTTCAGGTTAAGTGTGTGGCCTGCCACCAGACTCTGCGTT
CTCACATGGAGCTCACTGCCCATTTCAG
INTRON 7 - 8 33,777,864 33,779,043 1,180
GTTTGTACAGCTCTGGTCTTAGGCT..........TTTTTTTTTTTTTAATCCAAATTAG
8 EXON 8 33,776,269 33,777,863 - - 1,595
GGTTCGTTGTCAAAATGCTGGACCTGTTGCTATAGCTGAAAAAAGCATTACTCAGGTTGC
AAAAGAATTCATAGTAAGAGGTTATTGTTCAGATTGCAACCAGGTCTTTATGGATGTAGC
CAGCACCCAAAGTCACAAGAATTCAGGACACAAAATTACACTTGCGAACTCGGTGGAAGA
ATCTGTCTTGCTTTATTGCCACATCAGTGAAGGGAGTCGGCCTCCTTGTGATTTACATTT
ATTTAGTCAACCAAAAATTTCATCACTTAAACGGATTCTGTCCGTTAAAGAGTCCAGTGC
AGAGGATTGTATCATTCCGACAAAGAAGGTGAACTTAGGTGTTGAAAGCCTTGGAGGTGC
AACTCGTGTGCAGAGGCAGAGTCCAGCAGTCACAGCCTGGTTTTGTGAATGCAGACGGCG
GTTTCCCAGTGAAGAGGCGGTAGAAAAGCATGTTTTCTCGGCAAACACAATGTGTTATAA
GTGTGTGGTCTGTGGAAAGGTTTGTGAAGATTCGGGGGTCATGCGTTTACACATGAGCCG
GTTTCATGGAGGGGCGCATTTAAATAACTTTCTATTTTGGTGTCGGACGTGCAAAAAGGA
GTTAGTAAAGAAAGATGCCATCATGGCACACATTACTGAGTTTCATAGTGGGCATAGATA
TTTTTATGAGATGGATGAGGTAGAGGAGGAAGAGGAGGAGGCCATGCCGTCATCCTCTGT
GGAGAGCCATTTGAATACTGACAAACCTCCTTCACCCATTGCTGTTGTTGATCACTGCCC
GGCCAACAGTCCTCCCAGGGGCAGGTGGCAGTGCCGCATCTGTGAGGACATGTTTGAATC
CCAGGAGTGTGTGAAGCAGCACTGCATGTCCTTGACAAGCCACCGGTTTCACAGATACAG
CTGTGCCCACTGCAGAAAGACTTTCCATAAAGTGGAAACTCTGTACCGACATTGCCAGGA
CGAGCATGACAGTGAGATCATGATGAAGTACTTCTGTGGGCTTTGTGATCTCATTTTTAA
CAAGGAAGAAGAATTTCTGAGTCACTATAAGGAACACCACAGCATAGATTATGTGTTTGT
GTCAGAAAAAACTAAAACCTCAATTAAAACTGAAGGCGATTTTAAAATAGTAGAGACCAG
TAGTTTACTAAGCTGTGGCTGTCATGAGAGTTACATGTGTAAAATCAACAGAAAGGAAGA
CTATGACCGATGCCTTCCAGTCCTGCTGGAGAAAGGTAGGCTGTGGTTTCGCTGCAGTTC
GTGCTCAGCCACAGCACAGAATGTGACTGACATTAACACTCACGTCTGTCAAGTGCACAG
AAAAGAGAAAAGTGAGGAGGAGCAGCAGTATGTGATCAAGTGTGGCATCTGCACCAAGGC
ATTCCAGAACACGGAGAGCGCTCAGCAGCACTTCCACAGGAAGCACGCGGCCCTCCAGAA
ACCCACCGCGACCCCGGGGGGAGCCGACAGAAGCAGCACATGCCAGCTGGCTGCTAGTGC
CTCACATGCTGAGAAAAACCTGAAACAGCCTAGCTCTCAGAAACATTCAGACGTGGAAAA
AGGAGCTGAGCATGATGTACGCTGCCAGAACATAG
INTRON 8 - 9 33,773,034 33,776,268 3,235
GTATGGCTTTACAGCGTGAAATAAG..........TGTTGTTGTTGTTTGTTTTCCTTAG
9 EXON 9 33,772,893 33,773,033 - - 141
AGGAGGAAGTTGAGCTTCCGGATGTGGACTACCTGCGGACCATGACTCACATAGTCTTTG
TAGATTTTGATAACTGGTCCAACTTTTTTGGTCATCTACCTGGGCATCTTAATCAAGGAA
CGTTTATTTGGGGCTTTCAAG
INTRON 9 - 10 33,770,900 33,772,892 1,993
GTATGGTTGAGAAGGAGAGCATTAG..........CATATTTTTTTTCTAAAATTGATAG
10 EXON 10 33,770,769 33,770,899 - - 131
GGGGAAACACCAACTGGAAGCCCCCGCTCAGCTGTAAGGTCTATAATTACTTGAGCAGGA
TTGGCTGCTTCTTCCTTCATCCTCGCTGCAGTAAAAGAAAAGATGCCGCGGATTTTGCCA
TATGTATGCAT
INTRON 10 - 11 33,769,908 33,770,768 861
GTAAGTAGGAGTTTTATTAAAGACT..........ACCTGTACCGTTTGTTCCAACTTAG
11 EXON 11 33,769,721 33,769,907 - - 187
GCTGGCCGTCTAGATGAGCAACTTCCCAAACAAATTCCTTTCACCATCCTCTCGGGAGAC
CAAGGCTTTCTGGAGCTAGAGAATCAATTTAAGAAGACCCAGAGGCCAGCTCATATACTA
AACCCTCACCACTTAGAGGGAGACATGATGTGTGCCTTGTTAAATAGCATATCTGATACT
ACCAAAG
INTRON 11 - 12 33,765,910 33,769,720 3,811
GTATGCGGCTGCCATCACAGTGCAA..........CTGCCTTTGCGTTTCTGTTTTGCAG
12 EXON 12 33,765,844 33,765,909 - - 66
AGTGTGACAGTGACGATAGCTCGGGGATGAAAGGATCTCCAGCAGAGGAGCTCAGGGCCA
CGGAGG
INTRON 12 - 13 33,762,210 33,765,843 3,634
GTAAGACCGCATCCCTGCCACCCGA..........AAAATCTTTTTTTTTTTTAATGCAG
13 EXON 13 33,761,545 33,762,209 - - 665
ATGTGGAATTAGAAGAAGCTATTAGAAGAAGTCTTGAGGAGATGTAATTAAAGATATTAC
CACACAGCATCAAGTGGCCTTGAAGAGACTCAGGAAAATGAAACCTTGACCCTGTTTTCT
AAAAGAGATCAGGAAGCTACTAGGATAAATGTATCCCAAACGTGTTCTTTTCTATGTTCA
GAATCTCGTATTTGCTTTGTATTTTGTGCTATTATGTAAATAATGAATGGAAGGAAGAGA
ATGCATACCAATGGAAACATAAACTCATATTCTAATATGATGGGTGACACGTTTCTCCAA
CTAACACAGAATTCATGCATTTGGGTTACAGCCGTTTTCTAGGAGGAAAGGTGTGTAAAG
TTCTCTTTCCTTAGCAGTGCGTCTTTTTTTGTACTTTACAAATGACTCTTTTATTTTTTT
AGGAATGAAAATGAATATAAATAAAAGGTGCCATAACTCAGTTTTTTTCCAGAAATTCTC
TGTGTTATGTGACCCTAATGTATAATATACCTTGGAGATGACTGTTTATGATTATTAGAA
GAGAGCGATACACATTGATCACAGAAACAGATTCAAGTCAGTGCGGTTCCATGTGCTATT
ATGCAGCTGTATGCTTGCTCTGATTACAGTTGCACCTTACCACAATAAAAACATCTTTAA
AGCAA
3' upstream sequence
CTAAGAGGAAATTTTTTCTATCCCTTTCAGACTTTGGTATGATTTGAAATATCAAAGTAT
ATGTATGGACTTAAACTTATTTTAATATAAATTTTTTTATATAAATATACTTCTAAAGAA
ATAGTGTTAAAGTTTAGTCTATTCAGGAATAGTTCTTAACTCCTTACAACTTCAGCTTCA
TGTGGGCTGTCTAGTTCTTCACTGAGTTGATCTGGGATGGCATATGTAGTTCTTAAGGGT
CGGCGCCTCATTGGGAATAAGAACCTTACCAGCGGAAGAAGCAGCGCCTCATTGCCTTGA
TGTGTGTGTTTCATGATATTTGGGCAGAAATGTCATATAAGATACTTGAGACATAATTTG
TCAATATTAAATACATTTCTCTAGCTGGGCATGCCTGTGATTCCAGTACTCAGTCTGAGG
CAGGAGGACAACGTACCAAATTTCTAAATATCAAGCTTATTGTTTTTGCTAAAACAGAAA
GATGTGGCTTGAATTTTCTCTTTCCTCTGCAGCACTGGATAATTTAGTCTGAAATGGAAC
GTCTGGTCTTTCACGTTCCTTCTTCAGGCTCTCCTGGAGGAGCAAGCGAGCTCCTTGGAT
GGTCTGTGACATCGCCATCCTCTTGTGCTTTCTGAGTAGCCCTACGTAGATTTTTTAGTA
GATGTTATAACTTGAGAGTTTGTTATTCATATTACAAAATCAACCAGACTGTAGTTTATT
TTTCTTCTGTTTTTGTTTTCTTACTTTATTTCATGTATATGGGTACACTGTCGCTGTCTT
CACACACACCAGAAGAGGGCATTGGATCCCATTACAGATGGTTGTGAGCCACCATGTCAG
TTGCTGGGAATTGAACTCAGGACCTCTGGAAGAACAGTCAGTGCTCCTAACCGCCGAGCC
ATCTCTCCAGGCCCCTGTTTTTGTTTTTAAGTTGTTGTCACTGTGCATCCCTAGCTGCTT
TGACATTTTATGTTAAGGTGTCAAGCAAGGCCATTAAAGG..........

Sequence Detail Report

Gene Symbol (Gene ID) Zfp451 (ENSMUSG00000042197)
Transcript ID ENSMUST00000139143
SNP Information
Strain :
Sequence Retrieve :
Exon translate :
CDS Start ( 1 ) - End ( 94 )
-
Strand : forward reverse
Show sequence : nucleotide amino acid
Color information