MoG+ -Mouse Genome database with high added value-

Target CDS Information

Gene Symbol (Gene ID)

Dbn1 (ENSMUSG00000034675)

Cross Reference

EMBL	CT009762
GO	GO:0003779, GO:0005515, GO:0005886, ...show all
goslim_goa	GO:0003674, GO:0005575, GO:0005622, ...show all
MGI_trans_name	Dbn1-005
OTTP	OTTMUSP00000018535
OTTT	OTTMUST00000041298
UniParc	UPI000246779D
Uniprot/SPTREMBL	F7CPL2
Vega_transcript	Dbn1-005, OTTMUST00000041298
Vega_translation	214576, OTTMUSP00000018535

Definition

protein_id:ENSMUSP00000122574
translation:

MYGFCSVKDSQAALPKYVLINWVGEDVPDARKCACASHVAKVAEFFQGVDVIVNASSVED
IDAGAIGQRLSNGLARLSSPVLHRLRLREDENAEPVGTTYQKTDAAVEMKRINREQFWEQ
AKKEEELRKEEERKKALDARLRFEQERMEQERQEQEERERRYREREQQI

Chromosome

Length
Position(start - end)

1,206
55,481,550 - 55,482,757

Orient to Chromosome

minus

Link

Location : (13:55481550-55482757)
/

Detail Map

name	Dbn1 (ENSMUSG00000034675)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : Dbn1 note : drebrin 1 [Source:MGI Symbol;Acc:MGI:1931838]

name	Dbn1 (ENSMUSG00000034675)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000109923

name	Dbn1 (ENSMUSG00000034675)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000021950

name	Dbn1 (ENSMUSG00000034675)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000109921

name	Dbn1 (ENSMUSG00000034675)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000139275

name	Dbn1 (ENSMUSG00000034675) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS36677.1 RefSeq_peptide:NP_062787 RefSeq_mRNA:NM_019813.4 Vega_transcript:Dbn1-002 Vega_transcript:OTTMUST00000041295 Uniprot/SPTREMBL:Q3TRK3 UCSC:uc007qrd.2 UCSC:uc011yzu.1 Fantom:9930032O15 EMBL:AK162697 MGI_trans_name:Dbn1-002 Vega_translation:214573 Vega_translation:OTTMUSP00000018532 protein_id:BAE37026.1 OTTP:OTTMUSP00000018532 OTTT:OTTMUST00000041295 UniParc:UPI0000021C16
definition	note : transcript_id=ENSMUST00000109923 protein_id : ENSMUSP00000105549 translation : MAGVSFSGHRLELLAAYEEVIREESAADWALYTYEDGSDDLKLAASGEGGLQELSGHFENQKVMYGFCSVKDSQAALPKYVLINWVGEDVPDARKCACASHVAKVAEFFQGVDVIVNASSVEDIDAGAIGQRLSNGLARLSSPVLHRLRLREDENAEPVGTTYQKTDAAVEMKRINREQFWEQAKKEEELRKEEERKKALDARLRFEQERMEQERQEQEERERRYREREQQIEEHRRKQQSLEAEEAKRRLKEQSIFGDQRDEEEESQMKKSESEVEEAAAIIAQRPDNPREFFRQQERVASASGGSCDAPAPAPFNHRPGSHLDSHRRMAPTPIPTRSPSDSSTASTPIAEQIERALDEVTSSQPPPPPPPPPPTQEAQETTPSLDEELSKEAKVTAAPEVWAGCAAEPPQAQEPPLLQSSPLEDSMCTESPEQAALAAPAEPAASVTSVADVHAADTIETTTATTDTTIANNVTPAAASLIDLWPGNGEEASTLQAEPRVPTPPSGAEASLAEVPLLNEAAQEPLPPVGEGCANLLNFDELPEPPATFCDPEEEVGETLAASQVLTMPSALEEVDQVLEQELEPEPHLLTNGETTQKEGTQASEGYFSQSQEEEFAQSEEPCAKVPPPVFYNKPPEIDITCWDADPVPEEEEGFEGGD

name	Dbn1 (ENSMUSG00000034675) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS49274.1 Uniprot/SWISSPROT:Q9QXS6 RefSeq_peptide:NP_001170842 RefSeq_mRNA:NM_001177371.1 RefSeq_mRNA_predicted:XM_006517305.2 RefSeq_peptide_predicted:XP_006517368.1 Vega_transcript:Dbn1-001 Vega_transcript:OTTMUST00000041296 UCSC:uc007qrc.2 Fantom:3010022H11 EMBL:AB028740 EMBL:AB064321 EMBL:AF187147 EMBL:AF187148 EMBL:AK132060 EMBL:BC006714 EMBL:CT009762 GO:GO:0003779 GO:GO:0005515 GO:GO:0005515 GO:GO:0005515 GO:GO:0005522 GO:GO:0005522 GO:GO:0005886 GO:GO:0005886 GO:GO:0005911 GO:GO:0005921 GO:GO:0005938 GO:GO:0007015 GO:GO:0007399 GO:GO:0010643 GO:GO:0010644 GO:GO:0015629 GO:GO:0016020 GO:GO:0030426 GO:GO:0032507 GO:GO:0048699 GO:GO:0061351 MGI_trans_name:Dbn1-001 Vega_translation:214574 Vega_translation:OTTMUSP00000018533 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005737 goslim_goa:GO:0005856 goslim_goa:GO:0005886 goslim_goa:GO:0007010 goslim_goa:GO:0008092 goslim_goa:GO:0008150 goslim_goa:GO:0008283 goslim_goa:GO:0030154 goslim_goa:GO:0043226 goslim_goa:GO:0048856 protein_id:AAF25189.1 protein_id:AAF25190.1 protein_id:AAH06714.1 protein_id:BAB86904.1 protein_id:BAB87811.1 protein_id:BAE20965.1 protein_id:CAM17636.1 OTTP:OTTMUSP00000018533 OTTT:OTTMUST00000041296 UniParc:UPI0000021C17
definition	note : transcript_id=ENSMUST00000021950 protein_id : ENSMUSP00000021950 translation : MAGVSFSGHRLELLAAYEEVIREESAADWALYTYEDGSDDLKLAASGEGGLQELSGHFENQKVMYGFCSVKDSQAALPKYVLINWVGEDVPDARKCACASHVAKVAEFFQGVDVIVNASSVEDIDAGAIGQRLSNGLARLSSPVLHRLRLREDENAEPVGTTYQKTDAAVEMKRINREQFWEQAKKEEELRKEEERKKALDARLRFEQERMEQERQEQEERERRYREREQQIEEHRRKQQSLEAEEAKRRLKEQSIFGDQRDEEEESQMKKSESEVEEAAAIIAQRPDNPREFFRQQERVASASGGSCDAPAPAPFNHRPGRPYCPFIKASDSGPSSSSSSSSSPPRTPFPYITCHRTPNLSSSLPCSHLDSHRRMAPTPIPTRSPSDSSTASTPIAEQIERALDEVTSSQPPPPPPPPPPTQEAQETTPSLDEELSKEAKVTAAPEVWAGCAAEPPQAQEPPLLQSSPLEDSMCTESPEQAALAAPAEPAASVTSVADVHAADTIETTTATTDTTIANNVTPAAASLIDLWPGNGEEASTLQAEPRVPTPPSGAEASLAEVPLLNEAAQEPLPPVGEGCANLLNFDELPEPPATFCDPEEEVGETLAASQVLTMPSALEEVDQVLEQELEPEPHLLTNGETTQKEGTQASEGYFSQSQEEEFAQSEEPCAKVPPPVFYNKPPEIDITCWDADPVPEEEEGFEGGD

name	Dbn1 (ENSMUSG00000034675) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS49273.1 RefSeq_peptide:NP_001170843 RefSeq_mRNA:NM_001177372.1 Vega_transcript:Dbn1-009 Vega_transcript:OTTMUST00000111071 UCSC:uc007qrd.2 MGI_trans_name:Dbn1-009 Vega_translation:214575 Vega_translation:OTTMUSP00000062076 OTTP:OTTMUSP00000062076 OTTT:OTTMUST00000111071 UniParc:UPI00005AB81D
definition	note : transcript_id=ENSMUST00000109921 protein_id : ENSMUSP00000105547 translation : MAGVSFSGHRLELLAAYEEVIREESAADWALYTYEDGSDDLKLAASGEGGLQELSGHFENQKVMYGFCSVKDSQAALPKYVLINWVGEDVPDARKCACASHVAKVAEFFQGVDVIVNASSVEDIDAGAIGQRLSNGLARLSSPVLHRLRLREDENAEPVGTTYQKTDAAVEMKRINREQFWEQAKKEEELRKEEERKKALDARLRFEQERMEQERQEQEERERRYREREQQIEEHRRKQQSLEAEEAKRRLKEQSIFGDQRDEEEESQMKKSESEVEEAAAIIAQRPDNPREFFRQQERVASASGGSCDAPAPAPFNHRPGSHLDSHRRMAPTPIPTRSPSDSSTASTPIAEQIERALDEVTSSQPPPPPPPPPPTQEAQETTPSLDEELSKEAKVTAAPEVWAGCAAEPPQAQEPPLLQSSPLEDSMCTESPEQAALAAPAEPAASVTSVADVHAADTIETTTATTDTTIANNVTPAAASLIDLWPGNGEEASTLQAEPRVPTPPSGAEASLAEVPLLNEAAQEPLPPVGEGCANLLNFDELPEPPATFCDPEEEVGETLAASQVLTMPSALEEVDQVLEQELEPEPHLLTNGETTQKEGTQQASEGYFSQSQEEEFAQSEEPCAKVPPPVFYNKPPEIDITCWDADPVPEEEEGFEGGD

name	Dbn1 (ENSMUSG00000034675) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:Dbn1-005 Vega_transcript:OTTMUST00000041298 Uniprot/SPTREMBL:F7CPL2 EMBL:CT009762 GO:GO:0003779 GO:GO:0005515 GO:GO:0005886 GO:GO:0005911 GO:GO:0005921 GO:GO:0007015 GO:GO:0010643 GO:GO:0010644 GO:GO:0015629 GO:GO:0016020 GO:GO:0032507 MGI_trans_name:Dbn1-005 Vega_translation:214576 Vega_translation:OTTMUSP00000018535 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005856 goslim_goa:GO:0005886 goslim_goa:GO:0007010 goslim_goa:GO:0008092 goslim_goa:GO:0008150 goslim_goa:GO:0043226 OTTP:OTTMUSP00000018535 OTTT:OTTMUST00000041298 UniParc:UPI000246779D
definition	note : transcript_id=ENSMUST00000139275 protein_id : ENSMUSP00000122574 translation : MYGFCSVKDSQAALPKYVLINWVGEDVPDARKCACASHVAKVAEFFQGVDVIVNASSVEDIDAGAIGQRLSNGLARLSSPVLHRLRLREDENAEPVGTTYQKTDAAVEMKRINREQFWEQAKKEEELRKEEERKKALDARLRFEQERMEQERQEQEERERRYREREQQI

name
type	STS
link
xref	UniSTS_NUM:239027 UniSTS:Dbn1
definition	note : map_weight=1 standard_name : Dbn1

name
type	misc_feature
link
xref
definition	note : contig CT009762.8 1..175032(-1)

name	Dbn1 (ENSMUSG00000034675)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000041294 Vega_transcript:OTTMUST00000041294 MGI_trans_name:Dbn1-003 OTTT:OTTMUST00000041294
definition	note : retained_intron note : transcript_id=ENSMUST00000135705

name	Dbn1 (ENSMUSG00000034675)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000041301 Vega_transcript:OTTMUST00000041301 MGI_trans_name:Dbn1-008 OTTT:OTTMUST00000041301
definition	note : retained_intron note : transcript_id=ENSMUST00000139516

name	Dbn1 (ENSMUSG00000034675)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000111184 Vega_transcript:OTTMUST00000111184 MGI_trans_name:Dbn1-010 OTTT:OTTMUST00000111184
definition	note : retained_intron note : transcript_id=ENSMUST00000175813

name	Dbn1 (ENSMUSG00000034675)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000041299 Vega_transcript:OTTMUST00000041299 MGI_trans_name:Dbn1-006 OTTT:OTTMUST00000041299
definition	note : processed_transcript note : transcript_id=ENSMUST00000124480

name	Dbn1 (ENSMUSG00000034675)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000041300 Vega_transcript:OTTMUST00000041300 MGI_trans_name:Dbn1-007 OTTT:OTTMUST00000041300
definition	note : retained_intron note : transcript_id=ENSMUST00000127867

Polymorphisms
Exon
Sequence

Polymorphisms Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Dbn1 (ENSMUSG00000034675)
Transcript ID	ENSMUST00000139275

Reports
substitution
cSNPs	0
Insertion	3
Deletion	2
SNPs	+1kb 55488005(c.-5248G>T), 55488230(c.-5473T>C), 55489130(c.-6373T>C), 55489308(c.-6551A>G), 55489602(c.-6845G>A), 55489878(c.-7121A>G), 55490233(c.-7476T>C), 55490236(c.-7479C>T), 55490253(c.-7496G>A), 55490266(c.-7509C>G), 55490785(c.-8028T>C), 55490967(c.-8210C>T), 55491018(c.-8261A>T), 55491686(c.-8929C>T), 55492408(c.-9651A>G), 55492587(c.-9830T>C), 5'UTR CDS 3'UTR INTRON 55482399(c.141+14A>G), 55482520(c.67-33G>A), 55482564(c.67-77T>C), 55483945(c.-103-503A>G), 55484258(c.-103-816A>G), 55484310(c.-103-868T>C), 55484405(c.-103-963C>T), 55484559(c.-103-1117C>T), 55485008(c.-103-1566A>G), 55485382(c.-103-1940G>A), 55485800(c.-104+1709C>T), 55485986(c.-104+1523T>G), 55486246(c.-104+1263T>C), 55486807(c.-104+702C>T), 55486886(c.-104+623G>T), 55487463(c.-104+46C>T), 55487464(c.-104+45G>C), -1kb 55476803(c.4747C>T), 55477583(c.3967C>T), 55477792(c.3758G>A), 55478032(c.3518A>G), 55478411(c.3139A>G), 55478996(c.2554C>T), 55479016(c.2534A>G), 55479592(c.1958G>A), 55479897(c.1653G>A), 55479973(c.1577T>G), 55479975(c.1575A>G), 55480119(c.1431T>C), 55480123(c.1427T>C), 55480425(c.1125T>A), 55480466(c.1084A>G), 55480744(c.806A>G), 55480839(c.711C>A), 55481092(c.458T>C), 55481429(c.*121T>C),
Insertions	+1kb 5'UTR CDS 3'UTR INTRON 55483234 (c.-48+152_-48+153insGG), 55486829 (c.-104+678_-104+679dupAA), -1kb 55479808 (c.1739_1741dupCTC),
Deletions	+1kb 5'UTR CDS 3'UTR INTRON 55484533 (c.-103-1094_-103-1092delCTT), -1kb 55476778 (c.4770_4771delTC),
coding sequence substitutions
premature termination by the nucleotide substitution	0
synonymous num	0
non-synonymous num	0
synonymous substitutions
non-synonymous substitutions
B6 transcript (ENSMUST00000139275)	MYGFCSVKDSQAALPKYVLINWVGEDVPDARKCACASHVAKVAEFFQGVDVIVNASSVED IDAGAIGQRLSNGLARLSSPVLHRLRLREDENAEPVGTTYQKTDAAVEMKRINREQFWEQ AKKEEELRKEEERKKALDARLRFEQERMEQERQEQEERERRYREREQQI
MSMv4 transcript	MYGFCSVKDSQAALPKYVLINWVGEDVPDARKCACASHVAKVAEFFQGVDVIVNASSVED IDAGAIGQRLSNGLARLSSPVLHRLRLREDENAEPVGTTYQKTDAAVEMKRINREQFWEQ AKKEEELRKEEERKKALDARLRFEQERMEQERQEQEERERRYREREQQI
homology	100.00 (169 / 169)

Exon Detail Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Dbn1 (ENSMUSG00000034675)
Transcript ID	ENSMUST00000139275


..........GAGGTAAGCATGGGCCTGTAGCTGAGATGGAAGTAGTGGTGGTAGACTAG
GGAGGGTCCTTTCAGAGGAAATGGACTACACGTAACCCAGGCCTGGTCTGATGAGGAACT
GAATCCGGGCAGGGACAGAGTAAGGACCATAAGGGGTTTAAGGTAGGGTGTAACGGACCC
AGGAATGATGTGAGTCTGGGCTGGAGTTAAATGGATCAAGGGTGTTGGGCTGGGTCAATT
ACTCTGGGGAGATGGAGAGGGATGAATCTGGGCCTGGAATCTTGGTGGGTTTATGGCTAG
GGAAGAGGGGTGTGCTGCCAGGTTGGGGACGAGGACAAGACAGGTGCATGGGACTGGCCC
TGGGAGCAGAGCGGAAGCTCAGTGTCCGGTGCTGGCCAGCAGGGTGAGGGGCGCGTGTGG
GACGCCCCGGGGCAAACTGGGAAGGGGGGGCGGGCCTCCCCCTGGGCCGGGCCGGGGCGG
CGCTAGGACCGAGCGAGCCGAGGGAGTGAGCCGGGCGGAGCCAGCGCCCCCCGCCCCCCG
CCGGCCGGCTCCCCTCCCCCGGCCGCTGGCTCGCTCGCTCTCAGCGCTGCAGAGGCTCTG
AGGCGGCGGCGGCGACTCCCTCATCCCCTCCCTCCGGTTTCGGTCGGTCCGCCTGTGCGT
GCGTCTGTCCGTTCGGCCTCGGTCCGGCCCGCAGCATGGCCGGCGTCAGCTTCAGCGGCC
ACCGCCTGGAGCTGCTGGCGGCGTACGAGGAGGTGATCCGGGAGGAGAGCGCAGCCGACT
GGTGAGCCCCCCGCCCCCGCCCCCGCCCCCGGCCCCTTTGTCCCCAGGCCGCCGCGCGCC
TTTGTTTCCCCGAGGCTCTGCCACCGGGAAGGGAGGGGGAGACCCCGAAATGGTGCAACG
GCTCGGGAGAGCCGGGGAGGGGCTGCCTTTGTGCGAGCCGGGGGAGGGGCCGCTCGGGCC
AGGCTGGGCGCGCGGGCCGGGGCGCCCTGAGGCCGCCCTAAGGCTCACTG
GGGGCGCGGGAGCCGGACGCCAGCCACGCGGGTGTGGAGCCCAGACGTGGGGCCTGGGGTCCTACGGTCCTGTCGGAGCCCATCCCCCTTCTCACCCTGCCTCCCTCCACGGGCCCGGGGGACAG
GTGTGCACGGGCCAGCCAAGGGCAC..........TCTGAGCCATCCTCCCTCTCCTCAG
GGCTCTGTACACATACGAGGATGGCTCAGATGACCTCAAGCTTGCAGCGTCAGGAG
GTAAGAATTCCAGCCGTTCCCTCTC..........CCCAACATCTCCCTGGTTTCTCCAG
AAGGGGGCTTGCAGGAGCTTTCCGGCCACTTCGAGAACCAGAAAGTGATGTATGGTTTCTGCAGCGTCAAGGACTCCCAAGCTGCCCTGCCAAAATATGTGCTCATCAACTGG
GTATGTGGCTGTGGGATGGGGCTGG..........CCCCTCTTCACTGGGCACATTGCAG
GTTGGTGAGGATGTGCCTGATGCCCGAAAATGTGCTTGCGCCAGTCATGTGGCCAAGGTGGCTGAATTCTTCCAG
GTATGTTGGGACCGGGTCTGAAGTG..........CTAAACACTGCTTTTTGTATGGAAG
GGTGTTGATGTCATTGTGAATGCCAGCAGTGTGGAAGACATCGATGCTGGTGCCATTGGGCAGCGGCTCTCCAATGGACTGGCACGGCTCTCCAGCCCAGTATTGCACCGCCTGCGCCTTCGGGAGGATGAAAATGCTGAACCGGTG
GTCAGTGTATTCCCGGGACAGGCTG..........CATGCCCAGGCACTTGACTCTGCAG
GGTACCACCTACCAGAAGACGGATGCAGCAGTGGAGATGAAGCGGATTAACCGTGAGCAGTTTTGGGAGCAGGCCAAG
GTGGGCAATGCTGTAGCCTTCAGGC..........TGTCCTTCCTGGGTGTGGGGTGCAG
AAGGAGGAAGAGCTGCGGAAGGAGGAGGAGCGGAAGAAGGCTCTGGACGCCAGGCTCAGGTTTGAACAGGAACGGATGGAGCAGGAGCGGCAGGAGCAGGAAGAACGTGAGCGGCGCTACCGGGAGCGGGAGCAGCAGATT
GAGGAGCACAGGTAAGCTCAGGCCCCAGGCGAAGGGCCACCCCGCCCCGCCCCGCCCCGC
CCACCGCCCCCGCCCACCGCCCCAGCCTACTGCCCCCAGTCCACCCTGAAGGGGCTTCCC
CGCACTTCTCCTTCCAGGAGGAAACAGCAGAGTCTGGAAGCTGAAGAAGCCAAGAGGAGG
TTAAAGGAGCAGTCTATCTTTGTAAGTTCTTTTCCAGGGCTCTTGTGCCTGGCCAGGAAC
GTGAGGCTGGTCTGTGTGTTCTGCCCTCTGAGGGCATGCGTGGGCATCCCTATCATGAGT
GTGTCAGGTCCAACACCTATCTTGTGGGTTCCTGGTGTTTGTGTGAAAAACAAACAGACA
AATAACAGCAGCAGCAACAACAAAACATTTTTTTTCGACGTTTTTCTCCAAATTGGAAAA
GAAAATCCACCTTGACTCAGACCCTCGCTGACCTGGCCCCTCCACTGCTTCCGCCTTGAG
ACCTGGGGTCCTTGGGGTGTATTAGTCTTGGGCTCTGCATTTGGGGCTGGGGGGCTTGAG
AATTAGGTAGGCTTCATAATGAAAGGACTCAGAGCTCCTGCCTGAATGTAGGCCAGTGTT
GTTAGGGACTGAACACATAGACAGGCTCTGGGGCAGCCTCCTCCTCCACTGTTGCTGTCC
CAATCTATATTGTGCACAGCCATTCACAGCAAGATCTTTTGAAAAAGCCAAGTTTTGTAG
GAATTTCCAAGGTGTGCGTGCACACAGAGAAGTAGATTAGTGTAGTGACTTCTGAATTTG
CCCTTCATCTTTGTCAGTCACCAGCGTCTTAAGCAATGGCTGCAGAGGTTTTGCTCTTCT
TCAAGAGTTAATCCACTGCTTCAAAGTATCTCATAGGAAAGTAACGATGTAGCAACATTG
TAGCCAGCTGTGCTCCAAGAAAGGTCCCACCGGGAGCTGAAATTTAGCACTCTAAAATGA
TCCCCCACCACCACCCAAAAATGGGTTTCTCTGTAGCCCT..........

No.	Exon / Intron	Start	End	Start Phase	End Phase	Length	Sequence
	5' upstream sequence						..........GAGGTAAGCATGGGCCTGTAGCTGAGATGGAAGTAGTGGTGGTAGACTAG GGAGGGTCCTTTCAGAGGAAATGGACTACACGTAACCCAGGCCTGGTCTGATGAGGAACT GAATCCGGGCAGGGACAGAGTAAGGACCATAAGGGGTTTAAGGTAGGGTGTAACGGACCC AGGAATGATGTGAGTCTGGGCTGGAGTTAAATGGATCAAGGGTGTTGGGCTGGGTCAATT ACTCTGGGGAGATGGAGAGGGATGAATCTGGGCCTGGAATCTTGGTGGGTTTATGGCTAG GGAAGAGGGGTGTGCTGCCAGGTTGGGGACGAGGACAAGACAGGTGCATGGGACTGGCCC TGGGAGCAGAGCGGAAGCTCAGTGTCCGGTGCTGGCCAGCAGGGTGAGGGGCGCGTGTGG GACGCCCCGGGGCAAACTGGGAAGGGGGGGCGGGCCTCCCCCTGGGCCGGGCCGGGGCGG CGCTAGGACCGAGCGAGCCGAGGGAGTGAGCCGGGCGGAGCCAGCGCCCCCCGCCCCCCG CCGGCCGGCTCCCCTCCCCCGGCCGCTGGCTCGCTCGCTCTCAGCGCTGCAGAGGCTCTG AGGCGGCGGCGGCGACTCCCTCATCCCCTCCCTCCGGTTTCGGTCGGTCCGCCTGTGCGT GCGTCTGTCCGTTCGGCCTCGGTCCGGCCCGCAGCATGGCCGGCGTCAGCTTCAGCGGCC ACCGCCTGGAGCTGCTGGCGGCGTACGAGGAGGTGATCCGGGAGGAGAGCGCAGCCGACT GGTGAGCCCCCCGCCCCCGCCCCCGCCCCCGGCCCCTTTGTCCCCAGGCCGCCGCGCGCC TTTGTTTCCCCGAGGCTCTGCCACCGGGAAGGGAGGGGGAGACCCCGAAATGGTGCAACG GCTCGGGAGAGCCGGGGAGGGGCTGCCTTTGTGCGAGCCGGGGGAGGGGCCGCTCGGGCC AGGCTGGGCGCGCGGGCCGGGGCGCCCTGAGGCCGCCCTAAGGCTCACTG
1	EXON 1	55,487,509	55,487,633	-	-	125	GGGGCGCGGGAGCCGGACGCCAGCCACGCGGGTGTGGAGCCCAGACGTGGGGCCTGGGGT CCTACGGTCCTGTCGGAGCCCATCCCCCTTCTCACCCTGCCTCCCTCCACGGGCCCGGGG GACAG
	INTRON 1 - 2	55,483,443	55,487,508			4,066	GTGTGCACGGGCCAGCCAAGGGCAC..........TCTGAGCCATCCTCCCTCTCCTCAG
2	EXON 2	55,483,387	55,483,442	-	-	56	GGCTCTGTACACATACGAGGATGGCTCAGATGACCTCAAGCTTGCAGCGTCAGGAG
	INTRON 2 - 3	55,482,805	55,483,386			582	GTAAGAATTCCAGCCGTTCCCTCTC..........CCCAACATCTCCCTGGTTTCTCCAG
3	EXON 3	55,482,692	55,482,804	-	0	113	AAGGGGGCTTGCAGGAGCTTTCCGGCCACTTCGAGAACCAGAAAGTGATGTATGGTTTCT GCAGCGTCAAGGACTCCCAAGCTGCCCTGCCAAAATATGTGCTCATCAACTGG
	INTRON 3 - 4	55,482,488	55,482,691			204	GTATGTGGCTGTGGGATGGGGCTGG..........CCCCTCTTCACTGGGCACATTGCAG
4	EXON 4	55,482,413	55,482,487	0	0	75	GTTGGTGAGGATGTGCCTGATGCCCGAAAATGTGCTTGCGCCAGTCATGTGGCCAAGGTG GCTGAATTCTTCCAG
	INTRON 4 - 5	55,482,298	55,482,412			115	GTATGTTGGGACCGGGTCTGAAGTG..........CTAAACACTGCTTTTTGTATGGAAG
5	EXON 5	55,482,151	55,482,297	0	0	147	GGTGTTGATGTCATTGTGAATGCCAGCAGTGTGGAAGACATCGATGCTGGTGCCATTGGG CAGCGGCTCTCCAATGGACTGGCACGGCTCTCCAGCCCAGTATTGCACCGCCTGCGCCTT CGGGAGGATGAAAATGCTGAACCGGTG
	INTRON 5 - 6	55,481,991	55,482,150			160	GTCAGTGTATTCCCGGGACAGGCTG..........CATGCCCAGGCACTTGACTCTGCAG
6	EXON 6	55,481,913	55,481,990	0	0	78	GGTACCACCTACCAGAAGACGGATGCAGCAGTGGAGATGAAGCGGATTAACCGTGAGCAG TTTTGGGAGCAGGCCAAG
	INTRON 6 - 7	55,481,691	55,481,912			222	GTGGGCAATGCTGTAGCCTTCAGGC..........TGTCCTTCCTGGGTGTGGGGTGCAG
7	EXON 7	55,481,550	55,481,690	0	-	141	AAGGAGGAAGAGCTGCGGAAGGAGGAGGAGCGGAAGAAGGCTCTGGACGCCAGGCTCAGG TTTGAACAGGAACGGATGGAGCAGGAGCGGCAGGAGCAGGAAGAACGTGAGCGGCGCTAC CGGGAGCGGGAGCAGCAGATT
	3' upstream sequence						GAGGAGCACAGGTAAGCTCAGGCCCCAGGCGAAGGGCCACCCCGCCCCGCCCCGCCCCGC CCACCGCCCCCGCCCACCGCCCCAGCCTACTGCCCCCAGTCCACCCTGAAGGGGCTTCCC CGCACTTCTCCTTCCAGGAGGAAACAGCAGAGTCTGGAAGCTGAAGAAGCCAAGAGGAGG TTAAAGGAGCAGTCTATCTTTGTAAGTTCTTTTCCAGGGCTCTTGTGCCTGGCCAGGAAC GTGAGGCTGGTCTGTGTGTTCTGCCCTCTGAGGGCATGCGTGGGCATCCCTATCATGAGT GTGTCAGGTCCAACACCTATCTTGTGGGTTCCTGGTGTTTGTGTGAAAAACAAACAGACA AATAACAGCAGCAGCAACAACAAAACATTTTTTTTCGACGTTTTTCTCCAAATTGGAAAA GAAAATCCACCTTGACTCAGACCCTCGCTGACCTGGCCCCTCCACTGCTTCCGCCTTGAG ACCTGGGGTCCTTGGGGTGTATTAGTCTTGGGCTCTGCATTTGGGGCTGGGGGGCTTGAG AATTAGGTAGGCTTCATAATGAAAGGACTCAGAGCTCCTGCCTGAATGTAGGCCAGTGTT GTTAGGGACTGAACACATAGACAGGCTCTGGGGCAGCCTCCTCCTCCACTGTTGCTGTCC CAATCTATATTGTGCACAGCCATTCACAGCAAGATCTTTTGAAAAAGCCAAGTTTTGTAG GAATTTCCAAGGTGTGCGTGCACACAGAGAAGTAGATTAGTGTAGTGACTTCTGAATTTG CCCTTCATCTTTGTCAGTCACCAGCGTCTTAAGCAATGGCTGCAGAGGTTTTGCTCTTCT TCAAGAGTTAATCCACTGCTTCAAAGTATCTCATAGGAAAGTAACGATGTAGCAACATTG TAGCCAGCTGTGCTCCAAGAAAGGTCCCACCGGGAGCTGAAATTTAGCACTCTAAAATGA TCCCCCACCACCACCCAAAAATGGGTTTCTCTGTAGCCCT..........

Sequence Detail Report

Gene Symbol (Gene ID)	Dbn1 (ENSMUSG00000034675)
Transcript ID	ENSMUST00000139275

		SNP Information
Strain :
Sequence Retrieve :
Exon translate : CDS Start ( 1 ) - End ( 169 ) -
Strand :	forward reverse
Show sequence :	nucleotide amino acid
Color information