MoG+ -Mouse Genome database with high added value-

Target CDS Information

Gene Symbol (Gene ID)

Rpl7 (ENSMUSG00000043716)

Cross Reference

GO	GO:0003677, GO:0003729, GO:0003735, ...show all
goslim_goa	GO:0003674, GO:0003677, GO:0003723, ...show all
MGI_trans_name	Rpl7-003
OTTP	OTTMUSP00000018403
OTTT	OTTMUST00000041075
UCSC	uc007ajl.3
UniParc	UPI0000DBECCF
Uniprot/SPTREMBL	F6XI62
Vega_transcript	OTTMUST00000041075, Rpl7-003
Vega_translation	178758, OTTMUSP00000018403

Definition

codon_start:3
protein_id:ENSMUSP00000118695
translation:

XEGVRGASARRPWQYQEQTEGRLRIRLLGRREKKKKVATVPGTLKKKVPAGPKTLKKKVP
AVPETLKKKRRNFAELKVKRLRKKFALKTLRKARRKLIYEKAKHYHKEYRQMYRTEIRMA
RMARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIFNGTFVKLNKASINM
LRIVEPYIAWGYPNLKSVNELIYKRGYGKINKKRIALTDNSLIARSLGKFGIICMEDLIH
EIYTVGKRFKEANNFLWPFKLSSPRGGMKKKTTHFVEGG

Chromosome

Length
Position(start - end)

2,446
16,101,780 - 16,104,227

Orient to Chromosome

minus

Link

Location : (1:16101780-16104227)
/

Detail Map

name	Rpl7 (ENSMUSG00000043716)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : Rpl7 note : ribosomal protein L7 [Source:MGI Symbol;Acc:MGI:98073]

name	Rdh10 (ENSMUSG00000025921)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : Rdh10 note : retinol dehydrogenase 10 (all-trans) [Source:MGI Symbol;Acc:MGI:1924238]

name	Rpl7 (ENSMUSG00000043716)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000058437

name	Rpl7 (ENSMUSG00000043716)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000149566

name	Rdh10 (ENSMUSG00000025921)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000027053

name	Rpl7 (ENSMUSG00000043716) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS14829.1 Uniprot/SWISSPROT:P14148 RefSeq_peptide:NP_035421 RefSeq_mRNA:NM_011291.5 Vega_transcript:OTTMUST00000041073 Vega_transcript:Rpl7-001 Uniprot/SPTREMBL:Q5M9N8 UCSC:uc007ajl.3 Fantom:C920030B17 Fantom:E430010G11 Fantom:I730035E14 Fantom:I730060E22 EMBL:AK050656 EMBL:AK088291 EMBL:AK146219 EMBL:AK168137 EMBL:BC025909 EMBL:BC051261 EMBL:BC086786 EMBL:BC096452 EMBL:M29015 EMBL:M29016 EMBL:M85235 EMBL:X57960 EMBL:X57961 GO:GO:0003677 GO:GO:0003677 GO:GO:0003729 GO:GO:0003729 GO:GO:0003735 GO:GO:0005515 GO:GO:0005634 GO:GO:0005634 GO:GO:0005730 GO:GO:0005730 GO:GO:0005737 GO:GO:0005737 GO:GO:0005844 GO:GO:0005925 GO:GO:0005925 GO:GO:0006364 GO:GO:0006364 GO:GO:0006412 GO:GO:0016020 GO:GO:0016020 GO:GO:0022625 GO:GO:0022625 GO:GO:0030529 GO:GO:0030529 GO:GO:0042273 GO:GO:0042273 GO:GO:0042803 GO:GO:0042803 GO:GO:0044822 GO:GO:0044822 GO:GO:0070062 GO:GO:0070062 MGI_trans_name:Rpl7-001 Vega_translation:178757 Vega_translation:OTTMUSP00000018402 goslim_goa:GO:0003674 goslim_goa:GO:0003677 goslim_goa:GO:0003723 goslim_goa:GO:0003729 goslim_goa:GO:0003735 goslim_goa:GO:0005198 goslim_goa:GO:0005575 goslim_goa:GO:0005576 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005730 goslim_goa:GO:0005737 goslim_goa:GO:0005829 goslim_goa:GO:0005840 goslim_goa:GO:0006412 goslim_goa:GO:0008150 goslim_goa:GO:0009058 goslim_goa:GO:0034641 goslim_goa:GO:0042254 goslim_goa:GO:0043226 protein_id:AAA40064.1 protein_id:AAA40069.1 protein_id:AAA40070.1 protein_id:AAH25909.1 protein_id:AAH51261.1 protein_id:AAH86786.1 protein_id:AAH96452.1 protein_id:BAC34366.1 protein_id:BAC40262.1 protein_id:BAE26987.1 protein_id:BAE40105.1 protein_id:CAA41028.1 protein_id:CAA41029.1 OTTP:OTTMUSP00000018402 OTTT:OTTMUST00000041073 Reactome:R-MMU-156827 Reactome:R-MMU-156842 Reactome:R-MMU-156902 Reactome:R-MMU-1799339 Reactome:R-MMU-392499 Reactome:R-MMU-72613 Reactome:R-MMU-72689 Reactome:R-MMU-72706 Reactome:R-MMU-72737 Reactome:R-MMU-72764 Reactome:R-MMU-72766 Reactome:R-MMU-74160 Reactome:R-MMU-927802 Reactome:R-MMU-975956 Reactome:R-MMU-975957 UniParc:UPI0000001A05
definition	note : transcript_id=ENSMUST00000058437 protein_id : ENSMUSP00000071616 translation : MEAVPEKKKKVATVPGTLKKKVPAGPKTLKKKVPAVPETLKKKRRNFAELKVKRLRKKFALKTLRKARRKLIYEKAKHYHKEYRQMYRTEIRMARMARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIFNGTFVKLNKASINMLRIVEPYIAWGYPNLKSVNELIYKRGYGKINKKRIALTDNSLIARSLGKFGIICMEDLIHEIYTVGKRFKEANNFLWPFKLSSPRGGMKKKTTHFVEGGDAGNREDQINRLIRRMN

name	Rpl7 (ENSMUSG00000043716) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000041075 Vega_transcript:Rpl7-003 Uniprot/SPTREMBL:F6XI62 UCSC:uc007ajl.3 GO:GO:0003677 GO:GO:0003729 GO:GO:0003735 GO:GO:0005634 GO:GO:0005730 GO:GO:0005737 GO:GO:0005844 GO:GO:0005925 GO:GO:0006364 GO:GO:0006412 GO:GO:0016020 GO:GO:0022625 GO:GO:0030529 GO:GO:0042273 GO:GO:0042803 GO:GO:0044822 GO:GO:0070062 MGI_trans_name:Rpl7-003 Vega_translation:178758 Vega_translation:OTTMUSP00000018403 goslim_goa:GO:0003674 goslim_goa:GO:0003677 goslim_goa:GO:0003723 goslim_goa:GO:0003729 goslim_goa:GO:0003735 goslim_goa:GO:0005198 goslim_goa:GO:0005575 goslim_goa:GO:0005576 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005730 goslim_goa:GO:0005737 goslim_goa:GO:0005829 goslim_goa:GO:0005840 goslim_goa:GO:0006412 goslim_goa:GO:0008150 goslim_goa:GO:0009058 goslim_goa:GO:0034641 goslim_goa:GO:0042254 goslim_goa:GO:0043226 OTTP:OTTMUSP00000018403 OTTT:OTTMUST00000041075 UniParc:UPI0000DBECCF
definition	codon_start : 3 note : transcript_id=ENSMUST00000149566 protein_id : ENSMUSP00000118695 translation : XEGVRGASARRPWQYQEQTEGRLRIRLLGRREKKKKVATVPGTLKKKVPAGPKTLKKKVPAVPETLKKKRRNFAELKVKRLRKKFALKTLRKARRKLIYEKAKHYHKEYRQMYRTEIRMARMARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIFNGTFVKLNKASINMLRIVEPYIAWGYPNLKSVNELIYKRGYGKINKKRIALTDNSLIARSLGKFGIICMEDLIHEIYTVGKRFKEANNFLWPFKLSSPRGGMKKKTTHFVEGG

name	Rdh10 (ENSMUSG00000025921) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS14830.1 Uniprot/SWISSPROT:Q8VCH7 RefSeq_peptide:NP_598593 RefSeq_mRNA:NM_133832.3 Vega_transcript:OTTMUST00000062152 Vega_transcript:Rdh10-001 UCSC:uc007ajm.1 EMBL:AF456767 EMBL:BC019796 GO:GO:0001656 GO:GO:0001701 GO:GO:0002138 GO:GO:0004745 GO:GO:0004745 GO:GO:0004745 GO:GO:0005737 GO:GO:0005737 GO:GO:0005789 GO:GO:0007601 GO:GO:0007601 GO:GO:0008406 GO:GO:0009887 GO:GO:0014032 GO:GO:0016020 GO:GO:0016021 GO:GO:0016021 GO:GO:0031076 GO:GO:0035115 GO:GO:0042572 GO:GO:0042574 GO:GO:0042574 GO:GO:0042574 GO:GO:0043583 GO:GO:0043584 GO:GO:0044297 GO:GO:0048568 GO:GO:0048703 GO:GO:0052650 GO:GO:0052650 GO:GO:0055114 GO:GO:0060431 GO:GO:0060449 MGI_trans_name:Rdh10-001 Vega_translation:178759 Vega_translation:OTTMUSP00000030597 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005737 goslim_goa:GO:0005783 goslim_goa:GO:0006629 goslim_goa:GO:0008150 goslim_goa:GO:0009058 goslim_goa:GO:0009790 goslim_goa:GO:0016491 goslim_goa:GO:0030154 goslim_goa:GO:0040007 goslim_goa:GO:0043226 goslim_goa:GO:0044281 goslim_goa:GO:0048646 goslim_goa:GO:0048856 goslim_goa:GO:0050877 protein_id:AAH19796.2 protein_id:AAN64749.1 OTTP:OTTMUSP00000030597 OTTT:OTTMUST00000062152 Reactome:R-MMU-162582 Reactome:R-MMU-2187338 Reactome:R-MMU-2453902 Reactome:R-MMU-5362517 Reactome:R-MMU-5365859 UniParc:UPI00000E8BA4
definition	note : transcript_id=ENSMUST00000027053 protein_id : ENSMUSP00000027053 translation : MNIVVEFFVVTFKVLWAFVLAAARWLVRPKEKSVAGQVCLITGAGSGLGRLFALEFARRRALLVLWDINTQSNEETAGMVRHIYRDLEAADAAALQAGKGEEEILPPCNLQVFTYTCDVGKRENVYLTAERVRKEVGEVSVLVNNAGVVSGHHLLECPDELIERTMMVNCHAHFWTTKAFLPTMLEINHGHIVTVASSLGLFSTAGVEDYCASKFGVVGFHESLSHELKAAEKDGIKTTLVCPYLVDTGMFRGCRIRKEIEPFLPPLKPDYCVKQAMRAILTDQPMVCTPRLMYIVTFMKSILPFEAVVCMYRFLGADKCMYPFIAQRKQATNNNEAKNGI

name
type	misc_feature
link
xref
definition	note : contig AC162442.19 8380..201383(1)

name	Rpl7 (ENSMUSG00000043716)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000041078 Vega_transcript:OTTMUST00000041078 MGI_trans_name:Rpl7-006 OTTT:OTTMUST00000041078
definition	note : processed_transcript note : transcript_id=ENSMUST00000140597

name	Rpl7 (ENSMUSG00000043716)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000041074 Vega_transcript:OTTMUST00000041074 MGI_trans_name:Rpl7-002 OTTT:OTTMUST00000041074
definition	note : retained_intron note : transcript_id=ENSMUST00000141217

name	Rpl7 (ENSMUSG00000043716)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000041077 Vega_transcript:OTTMUST00000041077 MGI_trans_name:Rpl7-005 OTTT:OTTMUST00000041077
definition	note : retained_intron note : transcript_id=ENSMUST00000151017

name	Rpl7 (ENSMUSG00000043716)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000041076 Vega_transcript:OTTMUST00000041076 MGI_trans_name:Rpl7-004 OTTT:OTTMUST00000041076
definition	note : retained_intron note : transcript_id=ENSMUST00000125005

Polymorphisms
Exon
Sequence

Polymorphisms Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Rpl7 (ENSMUSG00000043716)
Transcript ID	ENSMUST00000149566

Reports
substitution
cSNPs	1
Insertion	6
Deletion	10
SNPs	+1kb 16104439(c.-214G>C), 16104530(c.-305C>A), 16104561(c.-336A>G), 16104716(c.-491C>G), 16104767(c.-542C>T), 16105119(c.-894A>G), 16105156(c.-931A>T), 16105752(c.-1527T>G), 16106348(c.-2123C>T), 16106455(c.-2230T>G), 16107189(c.-2964T>C), 16107309(c.-3084A>G), 16108099(c.-3874T>C), 16108100(c.-3875A>G), 16108116(c.-3891T>C), 16108123(c.-3898A>G), 16108175(c.-3950T>C), 16108192(c.-3967A>C), 16108203(c.-3978A>G), 16108209(c.-3984T>C), 16108485(c.-4260T>C), 16108783(c.-4558A>G), 5'UTR CDS 16102709(c.552G>A), 3'UTR INTRON 16102154(c.680-218C>T), 16102260(c.679+230A>G), 16102626(c.570-27C>G), 16103756(c.90-72C>T), 16103959(c.89+178G>A), 16104095(c.89+42G>A), -1kb 16096890(c.4890A>G), 16097273(c.4507C>A), 16097815(c.3965T>A), 16097821(c.3959G>A), 16097836(c.3944G>A), 16097859(c.3921C>G), 16097935(c.3845T>C), 16098324(c.3456A>C), 16098866(c.2914C>T), 16098967(c.2813T>C), 16099094(c.2686T>C), 16099171(c.2609G>A), 16099384(c.2396C>G), 16099836(c.1944C>T), 16100124(c.1656T>G), 16100143(c.1637T>C), 16100244(c.1536T>C), 16100274(c.1506C>T), 16100374(c.1406T>C), 16100436(c.1344G>T), 16100487(c.1293T>C), 16100517(c.1263T>C), 16100857(c.923C>A), 16100873(c.907C>T), 16100929(c.851C>T), 16100936(c.844C>T), 16101017(c.763G>A), 16101307(c.473T>C), 16101316(c.464G>C), 16101468(c.312A>G), 16101469(c.311C>T), 16101687(c.93C>T),
Insertions	+1kb 16108529 (c.-4305_-4304insTACT), 5'UTR CDS 3'UTR INTRON 16102626 (c.570-28dupT), -1kb 16097624 (c.4155_4156insAAAA), 16098412 (c.3367_3368insT), 16099455 (c.2324_2325insCTGGCT), 16101692 (c.87_88insTA),
Deletions	+1kb 16105741 (c.-1520_-1517delGTCC), 5'UTR CDS 3'UTR INTRON 16101939 (c.680-4delT), 16102838 (c.432-10delT), -1kb 16096981 (c.4798delC), 16097486 (c.4290_4293delTCTT), 16097802 (c.3975_3977delAAT), 16098136 (c.3642_3643delGG), 16099037 (c.2742delT), 16099225 (c.2554delT), 16101128 (c.650_*651delTA),
coding sequence substitutions
premature termination by the nucleotide substitution	0
synonymous num	1
non-synonymous num	0
synonymous substitutions	16102709 (p.Glu184Glu),
non-synonymous substitutions
B6 transcript (ENSMUST00000149566)	EGVRGASARRPWQYQEQTEGRLRIRLLGRREKKKKVATVPGTLKKKVPAGPKTLKKKVPA VPETLKKKRRNFAELKVKRLRKKFALKTLRKARRKLIYEKAKHYHKEYRQMYRTEIRMAR MARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIFNGTFVKLNKASINML RIVEPYIAWGYPNLKSVNELIYKRGYGKINKKRIALTDNSLIARSLGKFGIICMEDLIHE IYTVGKRFKEANNFLWPFKLSSPRGGMKKKTTHFVEGG
MSMv4 transcript	EGVRGASARRPWQYQEQTEGRLRIRLLGRREKKKKVATVPGTLKKKVPAGPKTLKKKVPA VPETLKKKRRNFAELKVKRLRKKFALKTLRKARRKLIYEKAKHYHKEYRQMYRTEIRMAR MARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIFNGTFVKLNKASINML RIVEPYIAWGYPNLKSVNELIYKRGYGKINKKRIALTDNSLIARSLGKFGIICMEDLIHE IYTVGKRFKEANNFLWPFKLSSPRGGMKKKTTHFVEGG
homology	100.00 (278 / 278)

Exon Detail Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Rpl7 (ENSMUSG00000043716)
Transcript ID	ENSMUST00000149566


..........CCTCTTCCACGACCGCGGCCGAAGGCTCCCGCCCTCGTCGTGCCACTCTT
CGCGGCTCACGCCCCCTGCTGTGGGTCGCCGTGGCTTGCGCCTGCCGGGTCCCGCAGCGG
CGAACCCCCCCATCCTCCTCGGACCTTCGGGTCATCACTCTTCCCGGTCTCGCTGCTTTC
GCCAACCGAGGGACTGTGGACCTGGCGGCCGATGATCAGGCGCTGCGGAAGACAGCCCGG
CAGTCGGGCGGAAAAAGGACCTCGGCAGCGCAGCCGAGGTGGGGGAGCAGGGCTGCGTGG
CCACGGGCCGCAGAGAGCCGGAGGAGGTGACAGACAGTGATTTCATAGCTCAGCTAGCCG
CTGAGGACGTGAAGCCTCATACTCTAGTGAGCCTAATGGGAATCACCGCCGCGAAGGCTG
CCCAGAGTGTCGGTCAACGTCGCCCTCCAGCCCCGCGGGTTATGCAGCGATGCATGCTGG
GACTTGTAGTTCACATCCCTGAACATGCCTTTTGGGTCCAAGGAATTCCGCAGAGCCTGA
CCCTAGGGTTGTCAACGCAACCTGGAGAAATTAAGCCCAGAGCTGACGAGGTGTCCCCAC
TCTATTCATTAAAAAAAAAAAAAAAAAAAAAAAAAATGTATTCAGTGCATTTGTTTTCCG
ATGAGTTTTACCATAAGGTTGGCTGGCCGTGACTAAGCCAAGCTGTTAATTTTGCGCCAG
CAAAGTGCAAAAATCTCAATTCTAGATTATTTTCCGGCTTATCTCAGGACAGCTATAAGG
CGTGGGGCTTCGCGCCCTCAGACCTTTAAGGAGACAGTGCGCATGCGCCACCTTTCTCTC
TTCTTTTCCGGCTGGAACCATGGAGGCTGTTCCGTAAGTCGATTCTTCTCTCCCCCAGAA
TCCTTCTCCATCCCCCAAACTAGAGGCATTTTGTCTCACTTTTCCTGTATCTGAGTGTAG
CCTGGAACCACTGCCTGCCTGTCTGGGTGTTTGTGACGCCGTGTGGTACT
AGGAGGGAGTGCGGGGGGCCTCCGCGCGGAGGCCTTGGCAGTACCAGGAGCAAACTGAGGGCAGACTGCGGATCCGGCTACTTGGGCGGAG
GTCCGTTCTTCGGTAGAATGTATTC..........ACTAGTAATTCTCTACAAACAACAG
AGAGAAGAAAAAGAAGGTTGCCACTGTGCCAGGAACCCTTAAGAAAAAGGTTCCTGCTGGGCCAAAAACTCTCAAGAAAAAGGTTCCCGCTGTGCCAGAAACCCTCAAGAAAAAGCGAAGGAATTTCGCAGAGTTGAAGGTGAAGCGCCTGAGGAAGAAGTTTGCCCTGAAGACA
GTAAGTAAACTTTGGAGGTCTTTAG..........GACTGACTGGCCATTGGTTTTTCAG
CTTCGAAAGGCAAGGAGGAAGCTCATCTATGAGAAGGCAAAGCACTATCACAAGGAGTACAGGCAGATGTACCGCACTGAGATTCGGATGGCCAGGATGGCAAGGAAAGCTGGCAACTTCTATGTGCCCGCAGAACCAAAGCTGGCCTTTGTCATCAGAATTCGAGG
GTGAGTTCACTTTGCATCGTGTTCT..........TGGATCTATTTTTTTTCTCTGGCAG
TATCAATGGAGTAAGCCCAAAGGTTCGTAAGGTTCTGCAGCTCCTTCGTCTTCGACAGATCTTCAATGGCACCTTTGTTAAGCTCAACAAGGCTTCAATTAACATGCTGCGGATTGTGGAACCATACATTGCATGGGG
GTGAGTTTTCTGTCTAGTCGGTTGG..........AACTTACCTGGTTTTCCTGGTGCAG
GTACCCCAACCTGAAGTCAGTAAACGAGCTCATCTACAAGCGAGGCTACGGCAAAATCAACAAGAAGCGGATTGCCTTGACAGATAATTCCTTGATTGCTCGGTCTCTTG
GTAGGTAATGATTTTTCAGGGAGGG..........GATCTTGGACTCAATTTTTTTTCAG
GTAAGTTTGGCATCATCTGCATGGAGGATCTAATTCATGAGATCTATACAGTCGGGAAACGCTTCAAGGAAGCAAATAACTTCCTGTGGCCCTTCAAGTTATCTTCCCCACGAGGTGGGATGAAGAAAAAGACAACTCACTTTGTAGAAGGTGGAGA
TGCTGGCAACAGGGAAGACCAGATAAACAGGCTTATTAGACGGATGAACTAAGGTAAGAA
GTTAGTGTTGTTTTTTGAGACAGAATCTATTTCTGGCAATCGCAAAACTATGTGTAGACT
CACCTAGTTTTGAATTCAAAACTTGATTGACGGCTTTTCTGTTGAGTGCGGATTGGGTAT
ATTGTTAAGTGTTTTTTGTTTTGTGTTTTTTGAGAGGGGGTTTGTCTGTATAACTCAAAT
CCGCCTGCCTCTGCCTTCCAAGTGCTGGGATTAAAGGCGTGCGTGTGCCCCCACGCCCGA
CCAGACATTATGTTTTACTTTGGGGAAATGTGTCTTTAATGGAAGTGTGCTCCTTTACGG
GGGGGTGCTGATGTGCGGCTTGGAAGACAGTCTCTAACTCGTGTGTTTTTTCCCTTTCAG
GTGTCACCCATTGTATTTTTGTAATCTGGTCAGTTAATAAACACTCACAGCTCGGCAAAT
TGAAATGTGTCGGAGTCTTTGTTGGCCTGCCCCTGCCCTGCTTACCACTGTAGTGGCTAA
TCCTGGAGTGTTCAGTCAGATCAACAGCCTATGATGTGCAAAGTTCCAGTTTATAGTTTT
TGAAAGACAACTTGTTAAAGGCTTTTCTCTGAGAAGATATATATATATATAAGCTATGCT
GAGTGTATCAAACTAGATAAGCATTTGTGATCTCTAGGAAATTGTAAAAGACATTGTAAT
TTGCTGCAGTTCCGTGTTTCAGGCATGGACTTGTTGGCCTACACATGAATGCATCCTTTT
TTTCATGTGTGGATGTTTTGCCTGCATGTGACTACCACATGTTAATTAATGCAACTAATT
AATTAAGGGGTTACTGATTGTTGTGAGACACCATGTGGGCATTGAGACTTGCTGGGCCCT
TGTGAGTTAAAAGTACTTTTTAAATTTTAAATACATAAGTACTTATTAGCATCTTAGGCA
GTTGGAGTGAGATAGACCAAAACCTAAAAGCTTGGAGGTT..........

No.	Exon / Intron	Start	End	Start Phase	End Phase	Length	Sequence
	5' upstream sequence						..........CCTCTTCCACGACCGCGGCCGAAGGCTCCCGCCCTCGTCGTGCCACTCTT CGCGGCTCACGCCCCCTGCTGTGGGTCGCCGTGGCTTGCGCCTGCCGGGTCCCGCAGCGG CGAACCCCCCCATCCTCCTCGGACCTTCGGGTCATCACTCTTCCCGGTCTCGCTGCTTTC GCCAACCGAGGGACTGTGGACCTGGCGGCCGATGATCAGGCGCTGCGGAAGACAGCCCGG CAGTCGGGCGGAAAAAGGACCTCGGCAGCGCAGCCGAGGTGGGGGAGCAGGGCTGCGTGG CCACGGGCCGCAGAGAGCCGGAGGAGGTGACAGACAGTGATTTCATAGCTCAGCTAGCCG CTGAGGACGTGAAGCCTCATACTCTAGTGAGCCTAATGGGAATCACCGCCGCGAAGGCTG CCCAGAGTGTCGGTCAACGTCGCCCTCCAGCCCCGCGGGTTATGCAGCGATGCATGCTGG GACTTGTAGTTCACATCCCTGAACATGCCTTTTGGGTCCAAGGAATTCCGCAGAGCCTGA CCCTAGGGTTGTCAACGCAACCTGGAGAAATTAAGCCCAGAGCTGACGAGGTGTCCCCAC TCTATTCATTAAAAAAAAAAAAAAAAAAAAAAAAAATGTATTCAGTGCATTTGTTTTCCG ATGAGTTTTACCATAAGGTTGGCTGGCCGTGACTAAGCCAAGCTGTTAATTTTGCGCCAG CAAAGTGCAAAAATCTCAATTCTAGATTATTTTCCGGCTTATCTCAGGACAGCTATAAGG CGTGGGGCTTCGCGCCCTCAGACCTTTAAGGAGACAGTGCGCATGCGCCACCTTTCTCTC TTCTTTTCCGGCTGGAACCATGGAGGCTGTTCCGTAAGTCGATTCTTCTCTCCCCCAGAA TCCTTCTCCATCCCCCAAACTAGAGGCATTTTGTCTCACTTTTCCTGTATCTGAGTGTAG CCTGGAACCACTGCCTGCCTGTCTGGGTGTTTGTGACGCCGTGTGGTACT
1	EXON 1	16,104,137	16,104,227	-	2	91	AGGAGGGAGTGCGGGGGGCCTCCGCGCGGAGGCCTTGGCAGTACCAGGAGCAAACTGAGG GCAGACTGCGGATCCGGCTACTTGGGCGGAG
	INTRON 1 - 2	16,103,685	16,104,136			452	GTCCGTTCTTCGGTAGAATGTATTC..........ACTAGTAATTCTCTACAAACAACAG
2	EXON 2	16,103,510	16,103,684	2	0	175	AGAGAAGAAAAAGAAGGTTGCCACTGTGCCAGGAACCCTTAAGAAAAAGGTTCCTGCTGG GCCAAAAACTCTCAAGAAAAAGGTTCCCGCTGTGCCAGAAACCCTCAAGAAAAAGCGAAG GAATTTCGCAGAGTTGAAGGTGAAGCGCCTGAGGAAGAAGTTTGCCCTGAAGACA
	INTRON 2 - 3	16,103,335	16,103,509			175	GTAAGTAAACTTTGGAGGTCTTTAG..........GACTGACTGGCCATTGGTTTTTCAG
3	EXON 3	16,103,168	16,103,334	0	2	167	CTTCGAAAGGCAAGGAGGAAGCTCATCTATGAGAAGGCAAAGCACTATCACAAGGAGTAC AGGCAGATGTACCGCACTGAGATTCGGATGGCCAGGATGGCAAGGAAAGCTGGCAACTTC TATGTGCCCGCAGAACCAAAGCTGGCCTTTGTCATCAGAATTCGAGG
	INTRON 3 - 4	16,102,830	16,103,167			338	GTGAGTTCACTTTGCATCGTGTTCT..........TGGATCTATTTTTTTTCTCTGGCAG
4	EXON 4	16,102,692	16,102,829	2	2	138	TATCAATGGAGTAAGCCCAAAGGTTCGTAAGGTTCTGCAGCTCCTTCGTCTTCGACAGAT CTTCAATGGCACCTTTGTTAAGCTCAACAAGGCTTCAATTAACATGCTGCGGATTGTGGA ACCATACATTGCATGGGG
	INTRON 4 - 5	16,102,600	16,102,691			92	GTGAGTTTTCTGTCTAGTCGGTTGG..........AACTTACCTGGTTTTCCTGGTGCAG
5	EXON 5	16,102,490	16,102,599	2	1	110	GTACCCCAACCTGAAGTCAGTAAACGAGCTCATCTACAAGCGAGGCTACGGCAAAATCAA CAAGAAGCGGATTGCCTTGACAGATAATTCCTTGATTGCTCGGTCTCTTG
	INTRON 5 - 6	16,101,937	16,102,489			553	GTAGGTAATGATTTTTCAGGGAGGG..........GATCTTGGACTCAATTTTTTTTCAG
6	EXON 6	16,101,780	16,101,936	1	-	157	GTAAGTTTGGCATCATCTGCATGGAGGATCTAATTCATGAGATCTATACAGTCGGGAAAC GCTTCAAGGAAGCAAATAACTTCCTGTGGCCCTTCAAGTTATCTTCCCCACGAGGTGGGA TGAAGAAAAAGACAACTCACTTTGTAGAAGGTGGAGA
	3' upstream sequence						TGCTGGCAACAGGGAAGACCAGATAAACAGGCTTATTAGACGGATGAACTAAGGTAAGAA GTTAGTGTTGTTTTTTGAGACAGAATCTATTTCTGGCAATCGCAAAACTATGTGTAGACT CACCTAGTTTTGAATTCAAAACTTGATTGACGGCTTTTCTGTTGAGTGCGGATTGGGTAT ATTGTTAAGTGTTTTTTGTTTTGTGTTTTTTGAGAGGGGGTTTGTCTGTATAACTCAAAT CCGCCTGCCTCTGCCTTCCAAGTGCTGGGATTAAAGGCGTGCGTGTGCCCCCACGCCCGA CCAGACATTATGTTTTACTTTGGGGAAATGTGTCTTTAATGGAAGTGTGCTCCTTTACGG GGGGGTGCTGATGTGCGGCTTGGAAGACAGTCTCTAACTCGTGTGTTTTTTCCCTTTCAG GTGTCACCCATTGTATTTTTGTAATCTGGTCAGTTAATAAACACTCACAGCTCGGCAAAT TGAAATGTGTCGGAGTCTTTGTTGGCCTGCCCCTGCCCTGCTTACCACTGTAGTGGCTAA TCCTGGAGTGTTCAGTCAGATCAACAGCCTATGATGTGCAAAGTTCCAGTTTATAGTTTT TGAAAGACAACTTGTTAAAGGCTTTTCTCTGAGAAGATATATATATATATAAGCTATGCT GAGTGTATCAAACTAGATAAGCATTTGTGATCTCTAGGAAATTGTAAAAGACATTGTAAT TTGCTGCAGTTCCGTGTTTCAGGCATGGACTTGTTGGCCTACACATGAATGCATCCTTTT TTTCATGTGTGGATGTTTTGCCTGCATGTGACTACCACATGTTAATTAATGCAACTAATT AATTAAGGGGTTACTGATTGTTGTGAGACACCATGTGGGCATTGAGACTTGCTGGGCCCT TGTGAGTTAAAAGTACTTTTTAAATTTTAAATACATAAGTACTTATTAGCATCTTAGGCA GTTGGAGTGAGATAGACCAAAACCTAAAAGCTTGGAGGTT..........

Sequence Detail Report

Gene Symbol (Gene ID)	Rpl7 (ENSMUSG00000043716)
Transcript ID	ENSMUST00000149566

		SNP Information
Strain :
Sequence Retrieve :
Exon translate : CDS Start ( 1 ) - End ( 278 ) -
Strand :	forward reverse
Show sequence :	nucleotide amino acid
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