top page

Tutorials are available here.

Target CDS Information

Gene Symbol (Gene ID) Adgrb3 (ENSMUSG00000033569)
Cross Reference
CCDS CCDS14855.1
EMBL AC116556, AC117221, AC121828, ...show all
GO GO:0004930, GO:0005096, GO:0005515, ...show all
goslim_goa GO:0003674, GO:0004871, GO:0005575, ...show all
MGI_trans_name Adgrb3-001
OTTP OTTMUSP00000030754
OTTT OTTMUST00000062405
protein_id AAO27431.1, EDL14414.1
RefSeq_mRNA NM_175642.4
RefSeq_peptide NP_783573
RefSeq_peptide_predicted XP_006495880.1
UCSC uc011wis.1
UniParc UPI00001ECF80
Uniprot/SWISSPROT Q80ZF8
Vega_transcript Bai3-001, OTTMUST00000062405
Vega_translation 178861, OTTMUSP00000030754
Definition protein_id:ENSMUSP00000116231
translation:
MKAVRNLLIYIFSTYLLVMFGFNAAQDFWCSTLVKGVIYGSYSVSEMFPKNFTNCTWTLE
NPDPTKYSIYLKFSKKDLSCSNFSLLAYQFDHFSHEKIKDLLRKNHSIMQLCSSKNAFVF
LQYDKNFIQIRRVFPTDFPGLQKKVEEDQKSFFEFLVLNKVSPSQFGCHVLCTWLESCLK
SENGRTESCGIMYTKCTCPQHLGEWGIDDQSLVLLNNVVLPLNEQTEGCLTQELQTTQVC
NLTREAKRPPKEEFGMMGDHTIKSQRPRSVHEKRVPQEQADAAKFMAQTGESGVEEWSQW
SACSVTCGQGSQVRTRTCVSPYGTHCSGPLRESRVCNNTALCPVHGVWEEWSPWSLCSFT
CGRGQRTRTRSCTPPQYGGRPCEGPETHHKPCNIALCPVDGQWQEWSSWSHCSVTCSNGT
QQRSRQCTAAAHGGSECRGPWAESRECYNPECTANGQWNQWGHWSGCSKSCDGGWERRMR
TCQGAAVTGQQCEGTGEEVRRCSEQRCPAPYEICPEDYLISMVWKRTPAGDLAFNQCPLN
ATGTTSRRCSLSLHGVASWEQPSFARCISNEYRHLQHSIKEHLAKGQRMLAGDGMSQVTK
TLLDLTQRKNFYAGDLLVSVEILRNVTDTFKRASYIPASDGVQNFFQIVSNLLDEENKEK
WEDAQQIYPGSIELMQVIEDFIHIVGMGMMDFQNSYLMTGNVVASIQKLPAASVLTDINF
PMKGRKGMVDWARNSEDRVVIPKSIFTPVSSKELDESSVFVLGAVLYKNLDLILPTLRNY
TVVNSKVIVVTIRPEPKTTDSFLEIELAHLANGTLNPYCVLWDDSKSNESLGTWSTQGCK
TVLTDASHTKCLCDRLSTFAILAQQPREIVMESSGTPSVTLIVGSGLSCLALITLAVVYA
ALWRYIRSERSIILINFCLSIISSNILILVGQTQTHNKSICTTTTAFLHFFFLASFCWVL
TEAWQSYMAVTGKIRTRLIRKRFLCLGWGLPALVVATSVGFTRTKGYGTDHYCWLSLEGG
LLYAFVGPAAAVVLVNMVIGILVFNKLVSRDGILDKKLKHRAGQMSEPHSGLTLKCAKCG
VVSTTALSATTASNAMASLWSSCVVLPLLALTWMSAVLAMTDKRSILFQILFAVFDSLQG
FVIVMVHCILRREVQDAFRCRLRNCQDPINADSSSSFPNGHAQIMTDFEKDVDIACRSVL
HKDIGPCRAATITGTLSRISLNDDEEEKGTNPEGLSYSTLPGNVISKVIIQQPTGLHMPM
SMNELSNPCLKKENTELRRTVYLCTDDNLRGADMDIVHPQERMMESDYIVMPRSSVSTQP
SMKEESKMNIGMETLPHERLLHYKVNPEFNMNPPVMDQFNMNLDQHLAPQEHMQNLPFEP
RTAVKNFMASELDDNVGLSRSETGSTISMSSLERRKSRYSDLDFEKVMHTRKRHMELFQE
LNQKFQTLDRFRDIPNTSSMENPAPNKNPWDTFKPPSEYQHYTTINVLDTEAKDTLELRP
AEWEKCLNLPLDVQEGDFQTEV

Chromosome 1
Length
Position(start - end)
758,591
25,068,168 - 25,826,760
Orient to Chromosome minus
Link Location : (1:25068168-25826760)
/

Detail Map


 

Report

Polymorphisms Report

Target Strain  MSMv4  JF1v3  KJRv1  SWNv1  CHDv1  NJLv1  BLG2v1  HMIv1  BFMv1  PGN2v1
Gene Symbol (Gene ID) Adgrb3 (ENSMUSG00000033569)
Transcript ID ENSMUST00000151309
Reports
substitution
cSNPs11
Insertion428
Deletion575
SNPs
+1kb
5'UTR
CDS
3'UTR
INTRON
-1kb
Insertions
+1kb
5'UTR
CDS
3'UTR
INTRON
-1kb
Deletions
+1kb
5'UTR
CDS
3'UTR
INTRON
-1kb
coding sequence substitutions
premature termination by the nucleotide substitution0
synonymous num10
non-synonymous num1
synonymous substitutions 25068237 (p.Pro1500Pro), 25117303 (p.Leu1058Leu), 25128833 (p.Tyr1007Tyr), 25396459 (p.Cys819Cys), 25432521 (p.Pro721Pro), 25457098 (p.Ile667Ile), 25460746 (p.Gln665Gln), 25487931 (p.Gly641Gly), 25487979 (p.Asn625Asn), 25826227 (p.Cys178Cys),
non-synonymous substitutions 25826369 (p.Arg131His),
B6 transcript
(ENSMUST00000151309)
MKAVRNLLIYIFSTYLLVMFGFNAAQDFWCSTLVKGVIYGSYSVSEMFPKNFTNCTWTLE
NPDPTKYSIYLKFSKKDLSCSNFSLLAYQFDHFSHEKIKDLLRKNHSIMQLCSSKNAFVF
LQYDKNFIQIRRVFPTDFPGLQKKVEEDQKSFFEFLVLNKVSPSQFGCHVLCTWLESCLK
SENGRTESCGIMYTKCTCPQHLGEWGIDDQSLVLLNNVVLPLNEQTEGCLTQELQTTQVC
NLTREAKRPPKEEFGMMGDHTIKSQRPRSVHEKRVPQEQADAAKFMAQTGESGVEEWSQW
SACSVTCGQGSQVRTRTCVSPYGTHCSGPLRESRVCNNTALCPVHGVWEEWSPWSLCSFT
CGRGQRTRTRSCTPPQYGGRPCEGPETHHKPCNIALCPVDGQWQEWSSWSHCSVTCSNGT
QQRSRQCTAAAHGGSECRGPWAESRECYNPECTANGQWNQWGHWSGCSKSCDGGWERRMR
TCQGAAVTGQQCEGTGEEVRRCSEQRCPAPYEICPEDYLISMVWKRTPAGDLAFNQCPLN
ATGTTSRRCSLSLHGVASWEQPSFARCISNEYRHLQHSIKEHLAKGQRMLAGDGMSQVTK
TLLDLTQRKNFYAGDLLVSVEILRNVTDTFKRASYIPASDGVQNFFQIVSNLLDEENKEK
WEDAQQIYPGSIELMQVIEDFIHIVGMGMMDFQNSYLMTGNVVASIQKLPAASVLTDINF
PMKGRKGMVDWARNSEDRVVIPKSIFTPVSSKELDESSVFVLGAVLYKNLDLILPTLRNY
TVVNSKVIVVTIRPEPKTTDSFLEIELAHLANGTLNPYCVLWDDSKSNESLGTWSTQGCK
TVLTDASHTKCLCDRLSTFAILAQQPREIVMESSGTPSVTLIVGSGLSCLALITLAVVYA
ALWRYIRSERSIILINFCLSIISSNILILVGQTQTHNKSICTTTTAFLHFFFLASFCWVL
TEAWQSYMAVTGKIRTRLIRKRFLCLGWGLPALVVATSVGFTRTKGYGTDHYCWLSLEGG
LLYAFVGPAAAVVLVNMVIGILVFNKLVSRDGILDKKLKHRAGQMSEPHSGLTLKCAKCG
VVSTTALSATTASNAMASLWSSCVVLPLLALTWMSAVLAMTDKRSILFQILFAVFDSLQG
FVIVMVHCILRREVQDAFRCRLRNCQDPINADSSSSFPNGHAQIMTDFEKDVDIACRSVL
HKDIGPCRAATITGTLSRISLNDDEEEKGTNPEGLSYSTLPGNVISKVIIQQPTGLHMPM
SMNELSNPCLKKENTELRRTVYLCTDDNLRGADMDIVHPQERMMESDYIVMPRSSVSTQP
SMKEESKMNIGMETLPHERLLHYKVNPEFNMNPPVMDQFNMNLDQHLAPQEHMQNLPFEP
RTAVKNFMASELDDNVGLSRSETGSTISMSSLERRKSRYSDLDFEKVMHTRKRHMELFQE
LNQKFQTLDRFRDIPNTSSMENPAPNKNPWDTFKPPSEYQHYTTINVLDTEAKDTLELRP
AEWEKCLNLPLDVQEGDFQTEV*
MSMv4 transcript
MKAVRNLLIYIFSTYLLVMFGFNAAQDFWCSTLVKGVIYGSYSVSEMFPKNFTNCTWTLE
NPDPTKYSIYLKFSKKDLSCSNFSLLAYQFDHFSHEKIKDLLRKNHSIMQLCSSKNAFVF
LQYDKNFIQIHRVFPTDFPGLQKKVEEDQKSFFEFLVLNKVSPSQFGCHVLCTWLESCLK
SENGRTESCGIMYTKCTCPQHLGEWGIDDQSLVLLNNVVLPLNEQTEGCLTQELQTTQVC
NLTREAKRPPKEEFGMMGDHTIKSQRPRSVHEKRVPQEQADAAKFMAQTGESGVEEWSQW
SACSVTCGQGSQVRTRTCVSPYGTHCSGPLRESRVCNNTALCPVHGVWEEWSPWSLCSFT
CGRGQRTRTRSCTPPQYGGRPCEGPETHHKPCNIALCPVDGQWQEWSSWSHCSVTCSNGT
QQRSRQCTAAAHGGSECRGPWAESRECYNPECTANGQWNQWGHWSGCSKSCDGGWERRMR
TCQGAAVTGQQCEGTGEEVRRCSEQRCPAPYEICPEDYLISMVWKRTPAGDLAFNQCPLN
ATGTTSRRCSLSLHGVASWEQPSFARCISNEYRHLQHSIKEHLAKGQRMLAGDGMSQVTK
TLLDLTQRKNFYAGDLLVSVEILRNVTDTFKRASYIPASDGVQNFFQIVSNLLDEENKEK
WEDAQQIYPGSIELMQVIEDFIHIVGMGMMDFQNSYLMTGNVVASIQKLPAASVLTDINF
PMKGRKGMVDWARNSEDRVVIPKSIFTPVSSKELDESSVFVLGAVLYKNLDLILPTLRNY
TVVNSKVIVVTIRPEPKTTDSFLEIELAHLANGTLNPYCVLWDDSKSNESLGTWSTQGCK
TVLTDASHTKCLCDRLSTFAILAQQPREIVMESSGTPSVTLIVGSGLSCLALITLAVVYA
ALWRYIRSERSIILINFCLSIISSNILILVGQTQTHNKSICTTTTAFLHFFFLASFCWVL
TEAWQSYMAVTGKIRTRLIRKRFLCLGWGLPALVVATSVGFTRTKGYGTDHYCWLSLEGG
LLYAFVGPAAAVVLVNMVIGILVFNKLVSRDGILDKKLKHRAGQMSEPHSGLTLKCAKCG
VVSTTALSATTASNAMASLWSSCVVLPLLALTWMSAVLAMTDKRSILFQILFAVFDSLQG
FVIVMVHCILRREVQDAFRCRLRNCQDPINADSSSSFPNGHAQIMTDFEKDVDIACRSVL
HKDIGPCRAATITGTLSRISLNDDEEEKGTNPEGLSYSTLPGNVISKVIIQQPTGLHMPM
SMNELSNPCLKKENTELRRTVYLCTDDNLRGADMDIVHPQERMMESDYIVMPRSSVSTQP
SMKEESKMNIGMETLPHERLLHYKVNPEFNMNPPVMDQFNMNLDQHLAPQEHMQNLPFEP
RTAVKNFMASELDDNVGLSRSETGSTISMSSLERRKSRYSDLDFEKVMHTRKRHMELFQE
LNQKFQTLDRFRDIPNTSSMENPAPNKNPWDTFKPPSEYQHYTTINVLDTEAKDTLELRP
AEWEKCLNLPLDVQEGDFQTEV*
homology99.93 (1523 / 1523)

Exon Detail Report

Target Strain  MSMv4  JF1v3  KJRv1  SWNv1  CHDv1  NJLv1  BLG2v1  HMIv1  BFMv1  PGN2v1
Gene Symbol (Gene ID) Adgrb3 (ENSMUSG00000033569)
Transcript ID ENSMUST00000151309
No. Exon / Intron Start End Start Phase End Phase Length Sequence
5' upstream sequence
..........ATCCCGGTGCTGAAATGACAGCTCTCCCGCTGCGGCAGGTCCGCTCTGAA
CGGCAGCAGACAGATGATCGAGTCCAGCGTTTACTTCCTACCCCTCCGTGTCGCCTTCCC
GTCTCCGCGCCCCCCTGCCTCTCCTCCTGGGGACTTTCTCCTACACTTGGTGGCGACCAG
CCTCAGCGGTGGGAACTGAGGATGCGAAAACCTCCCAGGCGCAGAAAAGATCGGTTTTCC
AGACGTGTTTGGGTTTGAGTAGCAGGGCGCGGGCTCGGCTAGAGCCCCGAGGAGCCCGCG
CCCGCCCGCCCGCCCGCCCGCCTCGCTCCCGCGCCCGTCCTCCCTCCCGCCCGCTCGCCC
GCTCGCCCGCTCGCCCGCCCGCCAGCTCGCCCGCCGCGGGGGAGGCCGGACTCTGGTCCG
GGCGCAGCGCTCCGCCGGGGACGCGCGCACCCACGAGCACGCGCGCGGGAGGGTTGCCCA
GCGGCGGGTGCGCGCCGAGGAACGCGCGGGCCCCCTTCGCGCGCAGCCCGGGGAGAGCGA
GCGCCGCGCGCCGGCGCGCACGCCCGCCACACAGCTTTACTATCTCGTGCCCTCGCGCGC
CTCCCTCCTCGCCCGGCATTCAAACAGCTTCCCGACGTCGCCAGCCCAGGATTTTACCCC
CAGCTCCTCAGCCGCGCTCCGTCCATCAGTACCTGGCAGGGAGGAGGGCCGGGGAGGAGG
GCGCACCAAGCAAGCAAACGGCTCCTGCTCCAGCCTCGCCACCGGCCGGGAGCACTCCTG
CCACCAGCCCACCGCCCAACACGCCGCCCCAGCCAGCGCCGCCGGCCACTTCTCAGCGCT
TTTTTGGCTTCTTGGCCAATCCGTTTGTTGCGGGGGGGTGGGTTTGGGAAAACACATCTG
CGCTCTTTATCCACTTCCATTTTTCTGTTTGGTGTTTCTGTGGAGTCTCCCTTCAGGGGG
CCTCTCCCCGCCTCTCCTTTGAAGGCTTCATTCACTTGGATAAGGCGCAA
1 EXON 1 25,829,462 25,829,707 - - 246
GGCTCTGGCCGCTGGATACCACCGCCCCCCCCCCTATTATTTTTTTTTCCTTTTTTTCCC
TCTGCCTTTCGTTTGCATGCATTATTTGTTTTCCAATCATAAATCTTAATATTTGAAGCT
GAACCGGGGGGAAAAATGGGCAACGGTGATTGGGACCGAAGGGGAGTCTCTCCATCACTG
TTGTTGGGACGTGTGCCTGTTCTGGTGTCTTAGATCAAGAGCCTCCCGGAGCTTTCGGAG
TGGAAG
INTRON 1 - 2 25,826,776 25,829,461 2,686
GTAAGGAAAGGGGCCTAAGGGTCAC..........CTCACTTCCTTTGCCATTCTTACAG
2 EXON 2 25,826,004 25,826,775 - 1 772
GCCAAATGACATAGGATGAAGGCTGTTCGTAACCTGCTGATTTATATATTTTCCACCTAT
CTCCTGGTTATGTTTGGATTTAATGCTGCCCAAGACTTCTGGTGTTCCACTTTGGTGAAG
GGAGTCATTTATGGATCCTATTCTGTAAGTGAAATGTTTCCCAAAAACTTTACAAACTGC
ACCTGGACACTGGAAAATCCAGATCCAACCAAATATAGCATTTACCTGAAATTTTCCAAA
AAGGACCTTAGCTGCTCTAACTTTTCCCTTCTGGCTTATCAGTTTGATCATTTTTCCCAT
GAAAAAATAAAGGATCTTTTGAGAAAGAACCATTCCATAATGCAACTTTGCAGTTCCAAG
AATGCTTTTGTTTTTCTACAGTACGATAAAAATTTCATTCAGATACACCGGGTATTTCCA
ACTGATTTCCCAGGATTACAGAAAAAAGTCGAAGAGGATCAGAAATCTTTTTTTGAGTTT
TTGGTACTGAACAAGGTGAGCCCGAGCCAGTTTGGTTGCCATGTCTTATGCACTTGGTTG
GAAAGCTGTTTAAAATCCGAAAATGGGAGAACCGAGTCTTGTGGAATTATGTACACAAAA
TGCACGTGCCCCCAGCACTTGGGAGAGTGGGGAATAGATGACCAGTCCCTGGTTCTGTTA
AATAACGTCGTGTTACCCCTGAATGAGCAGACGGAGGGTTGCCTGACTCAGGAGCTGCAA
ACTACTCAAGTCTGCAATCTGACCAGGGAGGCCAAGAGACCACCCAAAGAAG
INTRON 2 - 3 25,559,866 25,826,003 266,138
GTAAGTGCTCAGAGGCAGGGGGAGT..........TCATATACCTTTATTCTGTCTTTAG
3 EXON 3 25,559,755 25,559,865 1 1 111
AATTTGGAATGATGGGAGATCATACAATTAAAAGTCAGCGACCTCGATCTGTCCATGAGA
AAAGGGTCCCTCAGGAACAAGCTGATGCTGCTAAATTTATGGCACAAACTG
INTRON 3 - 4 25,553,837 25,559,754 5,918
GTAATACGTTAGTTACATTTTTCTA..........TGTTTATTTGTTGTCTTGCATGCAG
4 EXON 4 25,553,675 25,553,836 1 1 162
GTGAATCTGGTGTGGAAGAGTGGTCCCAGTGGAGCGCATGCTCAGTTACTTGTGGTCAAG
GGTCGCAGGTGCGAACCAGAACTTGTGTATCACCTTACGGGACACACTGCAGCGGCCCAT
TAAGAGAATCAAGGGTTTGCAATAACACTGCCCTCTGTCCAG
INTRON 4 - 5 25,547,581 25,553,674 6,094
GTAGTGTTAGCAGCAACTACGACTG..........CTGAAGCTTCTCTGCTTTATTACAG
5 EXON 5 25,547,416 25,547,580 1 1 165
TACATGGAGTTTGGGAGGAATGGTCACCTTGGAGCTTATGCTCCTTCACATGTGGCCGAG
GCCAAAGAACACGAACCAGGTCATGCACACCTCCTCAGTATGGAGGAAGGCCCTGTGAGG
GACCTGAAACTCATCACAAGCCTTGTAATATTGCCCTCTGTCCAG
INTRON 5 - 6 25,532,640 25,547,415 14,776
GTAAGCATATTTGGCAATTGATGAA..........CTGTCTTCTCTCTCTGCTTTGGTAG
6 EXON 6 25,532,475 25,532,639 1 1 165
TTGACGGACAGTGGCAGGAATGGAGTTCATGGAGCCACTGCTCAGTGACATGTTCTAATG
GGACACAGCAGAGGAGTCGGCAGTGCACAGCAGCTGCTCATGGAGGCTCTGAGTGCCGAG
GACCATGGGCTGAAAGCAGGGAGTGCTACAACCCTGAATGTACAG
INTRON 6 - 7 25,532,035 25,532,474 440
GTAAGGCCAGTTCCTGTGTACCAAT..........GTTAAACAAGATCCCTTTCTTTCAG
7 EXON 7 25,531,870 25,532,034 1 1 165
CCAATGGTCAGTGGAATCAGTGGGGTCACTGGAGTGGATGTTCCAAGTCCTGTGATGGTG
GCTGGGAGAGGAGAATGAGGACTTGTCAGGGCGCAGCTGTAACAGGACAGCAGTGTGAAG
GCACAGGTGAAGAGGTACGAAGATGCAGTGAGCAGCGGTGCCCAG
INTRON 7 - 8 25,505,015 25,531,869 26,855
GTAAGAAGAGCCTGCTGCGTGTGTG..........CATATTTCTATATCTTAAATTCCAG
8 EXON 8 25,504,913 25,505,014 1 1 102
CACCTTATGAAATATGCCCAGAGGATTATCTTATATCAATGGTGTGGAAAAGGACTCCTG
CAGGCGACCTGGCATTCAATCAATGTCCACTGAATGCCACAG
INTRON 8 - 9 25,504,540 25,504,912 373
GTACAGTAAGATGACACACCCATAG..........TCTCTCTGTTCTTTGTGACTTGCAG
9 EXON 9 25,504,433 25,504,539 1 0 107
GCACCACTAGCAGACGCTGCTCTCTCAGTCTTCATGGAGTGGCCTCCTGGGAACAGCCGA
GCTTTGCAAGATGCATATCCAATGAGTACAGACACTTGCAGCATTCA
INTRON 9 - 10 25,488,120 25,504,432 16,313
GTAGGTGCAAAGCCAGCTTTAGTAC..........TTTTCTGTTCTTTTGGCTATAACAG
10 EXON 10 25,487,925 25,488,119 0 0 195
ATTAAAGAGCACCTTGCGAAGGGGCAGCGGATGCTGGCAGGTGATGGAATGTCCCAGGTC
ACCAAGACACTATTGGATTTAACCCAGAGGAAAAATTTCTATGCAGGTGACCTTCTGGTG
TCTGTGGAAATCCTGAGAAACGTGACAGACACGTTTAAAAGGGCAAGTTACATCCCTGCG
TCTGATGGTGTCCAG
INTRON 10 - 11 25,460,812 25,487,924 27,113
GTAAGGGAGAAGAAGCCTGAAAGAG..........ACTTCTTATCTGATTTAATTTACAG
11 EXON 11 25,460,743 25,460,811 0 0 69
AACTTCTTTCAAATAGTTAGCAACCTTCTTGATGAAGAAAACAAGGAGAAATGGGAAGAC
GCACAGCAG
INTRON 11 - 12 25,457,101 25,460,742 3,642
GTGAGGATGGGATTATTTTAGAACT..........GTCTAACTTGCTCTTATTTTTCTAG
12 EXON 12 25,456,992 25,457,100 0 1 109
ATATACCCAGGCTCAATAGAGTTAATGCAGGTGATTGAAGATTTTATACACATTGTTGGA
ATGGGGATGATGGACTTTCAAAATTCATACCTAATGACTGGAAATGTAG
INTRON 12 - 13 25,432,577 25,456,991 24,415
GTAAGAAATAGGAACAGTCCTCAAA..........ACAGGATTCTTCCTTTTTCAAATAG
13 EXON 13 25,432,427 25,432,576 1 1 150
TGGCGAGCATTCAGAAGCTCCCTGCTGCATCTGTTCTAACCGACATCAACTTCCCGATGA
AAGGCCGGAAAGGAATGGTAGACTGGGCAAGAAATTCAGAAGATCGCGTTGTGATTCCAA
AAAGCATTTTCACTCCCGTGTCTTCAAAAG
INTRON 13 - 14 25,431,499 25,432,426 928
GTAATAATGAGAAATAGTAGGAGCT..........TAGCTTTTCACTTTATTCTTCCTAG
14 EXON 14 25,431,423 25,431,498 1 2 76
AATTAGATGAATCATCTGTTTTTGTTCTTGGAGCGGTCCTATACAAAAACTTAGACCTAA
TTTTGCCTACTTTGAG
INTRON 14 - 15 25,420,661 25,431,422 10,762
GTAAGCTACAAAGAAATAAGCTGTT..........TTTAATCTTTATTATTCTGTTTCAG
15 EXON 15 25,420,558 25,420,660 2 0 103
AAATTACACTGTCGTCAATTCTAAAGTCATCGTGGTCACAATCAGGCCTGAACCTAAAAC
AACTGACTCATTTTTGGAGATAGAGCTAGCTCACTTGGCAAAT
INTRON 15 - 16 25,396,480 25,420,557 24,078
GTAAGTCTCATGCAATTTACACTGT..........TATTTTATTCTCTGTTTATTTTTAG
16 EXON 16 25,396,436 25,396,479 0 2 44
GGCACTTTGAATCCATATTGTGTGTTATGGGATGACTCAAAATC
INTRON 16 - 17 25,228,548 25,396,435 167,888
GTAAGTGGCCAATGCTTTGTAATAT..........GATCTCCCCTCCACCCCCTTTGCAG
17 EXON 17 25,228,421 25,228,547 2 0 127
GAACGAGTCTTTGGGAACGTGGTCCACCCAGGGATGTAAAACTGTGCTTACCGATGCATC
CCATACGAAATGCTTATGTGATCGGCTCTCTACCTTCGCCATTTTGGCTCAGCAACCTAG
AGAAATA
INTRON 17 - 18 25,226,824 25,228,420 1,597
GTAAGTAACAAAGGGAAAACACGGC..........TTCTTCCCCTCCCCCCAACTTACAG
18 EXON 18 25,226,720 25,226,823 0 2 104
GTCATGGAATCCTCTGGTACCCCCTCAGTTACCCTCATAGTAGGCAGTGGCCTCTCCTGC
CTGGCCTTGATAACTCTAGCAGTTGTGTACGCAGCACTATGGAG
INTRON 18 - 19 25,221,863 25,226,719 4,857
GTATGTAATTAGTGGGTAGACCTGA..........AAATTTATCACATTTCTTTCACTAG
19 EXON 19 25,221,760 25,221,862 2 0 103
GTATATTCGCTCTGAGAGGTCCATCATTCTAATTAACTTCTGCCTGTCTATCATCTCATC
CAATATCCTCATACTGGTTGGACAGACTCAGACACACAATAAG
INTRON 19 - 20 25,131,402 25,221,759 90,358
GTATGACAGCTGACTCCTCCCATCC..........GCGCTTCCTCCTTCTGTCTCCACAG
20 EXON 20 25,131,251 25,131,401 0 1 151
AGCATCTGCACGACCACCACCGCGTTCCTGCATTTTTTCTTCCTGGCTTCATTCTGTTGG
GTCTTGACAGAGGCGTGGCAGTCGTATATGGCTGTGACAGGAAAAATCAGGACCCGGCTT
ATAAGAAAACGCTTTTTGTGCCTTGGATGGG
INTRON 20 - 21 25,128,889 25,131,250 2,362
GTAAGCTTATTAATAGGCCCTTTAC..........AAGTGTCACCTTGCTTTTCTTGCAG
21 EXON 21 25,128,819 25,128,888 1 2 70
GGCTGCCAGCTTTAGTAGTGGCCACATCTGTAGGCTTCACTAGGACGAAAGGATATGGCA
CGGATCACTA
INTRON 21 - 22 25,126,708 25,128,818 2,111
GTAAGTCCATCTATAATGCTACCTT..........TAGTTTTATCTAATGCTATTTTTAG
22 EXON 22 25,126,641 25,126,707 2 0 67
CTGCTGGCTGTCTCTAGAAGGAGGACTGCTCTATGCCTTCGTTGGACCTGCAGCGGCTGT
TGTCCTG
INTRON 22 - 23 25,117,375 25,126,640 9,266
GTAAACTCGGAATTCGCTTACTTGA..........GGTCAACTTTGTTTCTGTTTGACAG
23 EXON 23 25,117,289 25,117,374 0 2 86
GTCAACATGGTGATTGGCATTTTGGTATTTAATAAACTTGTTTCCAGAGATGGGATCCTA
GATAAAAAGCTCAAACACAGAGCCGG
INTRON 23 - 24 25,112,276 25,117,288 5,013
GTAAGCTGCCATTGGTGGATTTTGA..........TTGTGGGTGTTCTGTTTGTTTGCAG
24 EXON 24 25,112,177 25,112,275 2 2 99
TCAGATGAGTGAGCCTCATAGCGGTCTGACGCTCAAATGTGCCAAGTGTGGAGTAGTTTC
TACAACAGCTTTGTCAGCCACCACCGCCAGTAACGCCAT
INTRON 24 - 25 25,111,864 25,112,176 313
GTTAGTCTCAAAAATTTACATCTTC..........GTCGCTTTCTTTTCCCTTTCAACAG
25 EXON 25 25,111,692 25,111,863 2 0 172
GGCCTCTCTTTGGAGCTCCTGTGTGGTGCTACCGCTTCTGGCTCTGACATGGATGTCTGC
AGTTCTGGCCATGACAGATAAACGCTCCATATTGTTTCAGATACTTTTTGCCGTGTTTGA
TTCATTACAAGGCTTTGTGATAGTCATGGTCCACTGCATTCTTCGGAGAGAG
INTRON 25 - 26 25,101,529 25,111,691 10,163
GTGAGACATAGATTTCCTCTGTAAA..........AATGTTTTTTTTTTCCTCCCCACAG
26 EXON 26 25,101,433 25,101,528 0 0 96
GTTCAAGATGCATTTAGATGCCGGTTGAGAAACTGCCAGGATCCAATCAATGCTGATTCT
TCAAGTTCTTTTCCTAATGGACATGCTCAAATCATG
INTRON 26 - 27 25,098,916 25,101,432 2,517
GTGAGCTTTTATTTTCCTTCTGGTT..........TATGCCTTATTATTTCTTGTTACAG
27 EXON 27 25,098,876 25,098,915 0 1 40
ACAGACTTTGAAAAGGACGTAGACATTGCTTGCCGATCAG
INTRON 27 - 28 25,094,409 25,098,875 4,467
GTAAGAGTATTTTGATCTTTAAGAT..........TTAACTACCCTGCTCCAATTTGCAG
28 EXON 28 25,093,765 25,094,408 1 0 644
TGCTTCATAAGGATATCGGCCCCTGCCGCGCAGCAACCATAACAGGAACACTCTCCAGGA
TTTCTCTAAATGATGATGAGGAAGAAAAGGGAACAAACCCTGAAGGGCTAAGCTACTCAA
CATTGCCTGGAAATGTCATTTCCAAAGTCATCATTCAACAGCCCACAGGCCTGCACATGC
CTATGAGTATGAACGAGCTAAGCAATCCGTGTCTGAAAAAAGAGAACACTGAACTGCGGA
GAACTGTGTACTTATGCACGGATGACAATCTGAGAGGGGCCGATATGGACATTGTCCACC
CCCAAGAACGAATGATGGAAAGTGACTATATTGTGATGCCTAGAAGTTCTGTAAGCACCC
AGCCATCAATGAAAGAGGAGAGCAAGATGAATATTGGCATGGAAACCTTGCCGCATGAAA
GGCTATTACACTACAAAGTAAACCCTGAATTCAATATGAATCCCCCCGTAATGGACCAGT
TTAATATGAACTTAGATCAGCATCTTGCACCCCAGGAACATATGCAGAATTTACCCTTTG
AGCCTCGCACAGCTGTGAAGAATTTCATGGCCTCTGAGTTGGATGATAATGTGGGACTGT
CAAGAAGTGAAACTGGATCAACGATATCAATGAGTTCTCTAGAG
INTRON 28 - 29 25,084,280 25,093,764 9,485
GTGAGTCAGAAGAGGTTAACTAGTT..........CCTTCCTCTAAAAACAAACTCACAG
29 EXON 29 25,084,244 25,084,279 0 0 36
AGAAGAAAATCGCGGTATTCTGACCTTGACTTTGAG
INTRON 29 - 30 25,074,790 25,084,243 9,454
GTGAGTTCCTATGTATTACTTTGTA..........AGAGCCGCCCTCTTCTCTCTTACAG
30 EXON 30 25,074,685 25,074,789 0 0 105
AAGGTCATGCACACAAGGAAGAGGCACATGGAATTGTTTCAGGAACTAAATCAGAAGTTT
CAGACTTTGGACAGATTTCGGGACATACCAAACACAAGCAGTATG
INTRON 30 - 31 25,068,357 25,074,684 6,328
GTGAGTATATTCTGCATCCACAATG..........CTATTCTTTTTTTTTTCCTCAACAG
31 EXON 31 25,067,550 25,068,356 0 - 807
GAAAACCCAGCACCAAACAAGAATCCATGGGACACTTTCAAACCCCCCAGTGAATACCAA
CATTACACCACAATCAATGTCTTAGACACGGAGGCAAAGGATACTCTGGAGCTGAGGCCT
GCCGAGTGGGAGAAGTGTCTGAATTTGCCTCTGGATGTGCAAGAGGGTGATTTTCAAACA
GAAGTGTAAGGCAATCAAAAAGAACTTAGGTAGAGACACAGTCAAATACACTGACACTGA
GACTTGGGAAGCCTGACATTTCCACCTGGACAGTGTGACTTTCCTCTGTCAGGACCCTTC
TTGTGCCAACATCAGTGTTTTCTTATGGCAATTTCTCACTGGTCAGGCTAGTGGAGAGAG
ATGGCCAAGTGTACAGTTCTCACCACCCCGTGTTGTAAGTACCCGTGGAATGGATTTGTA
AGGTAATCTTTATAGATAAACCTCAAGCAAGGATTTCATGTTGTAACAGCTTCATGTGGT
TTAGTTTTCAGAAAACTTCACCATGAAGCACAATGTATATATTTATGCAGTTTTTAAAGT
TTATAACAGTCTGTTTGGCCATTACTACACTTTTTACTTTATAATATAAAAGCAAAGTTT
TTGTCATTAAATGAATGTTTGTTGAGCTACATTCTTCATTGCTTTAAATGCAATAAAGTA
ATAATCTCACTTTTATATGAATAATATATTTCACATCTTTATTATTGCAGTTTTCTCTAG
AAGGCTCTGAGTAGCTTTCTCTGCTGCAGCTGTGTATAAAATATTTAAAATGTTGTATGG
TGTAAATAAACTTTTGTCTACATATCA
3' upstream sequence
GTTTTTTAGTGCATTTTATTTTGGATTTGTTGAACAGAAATTTACATATTTATAACGTTT
TCTTTTTCAATACCGACACTAAAATGTATTCAGAGTTTTAACGGCATACCATTATTACTC
CTTTGAGCCTAATGATTTCTCAGTGTAATAATAGGTTTGTATAGTGCTTCTCTATGTCCT
ACTTAAACGCCCTTCGGAATAATGTACCATGTAAATGGGGTTTGTCAGAAATCTGTGACT
ATCATCTTCGTCATATCATCATCTTCCCTTCTGTCTTGAGTCAAAATGACAAGTGGAAGG
AAACCCTAGGCTACTCAACAGAAGATGATGCAGGGGAATGATTTAGGTGATTAAGTTTGC
TGCATGTTTCCCAGAAAATGAGTTCTACTGGAGTTCTTCATAATATAAGCATCAACGAAC
TTATCTGAGACCTTAAATATCTGATCTGCATACTCACTGGCAGAAGGAAAAGGATAATCG
ATGTGGTTGTCTCTGGTTTGAAAGTAAAGAACCCAAGATGAGCCAACTGCACAAGCAGTT
CCCAGTGCCCTCTCTCATGGCGATGTCTCTCGCTTCCTCAGATGTCTGTTCAACGAAGGC
CAAGAGGGAATTGAGCAACCGCCAGGGCTTTGGAGAGTGTATCCTTGTTTTGTTTTTTGT
TTTTTTTTAACTAGATATTTTCTTTATTTACATTTCAAATGCTATCCCGAAAGTTCCCTA
TACCCTCCTCTGACCCCGCCCTGCTCTCCTACCCACCCACTCCCACTTCTTGGCCCTGGC
GACCCCCTGTACTGGGGCATCTTGCAGATCGAAGGTAATGGAGAGAAGATTGGAGGTGTG
TCCTCGTGTGTCCCAGAATGCTTCATTGGATTCGCTTCCAGCTAAGTCTGAGCTGTGTGG
TCTGTGTTTGGAACTTATGTAGATCAGTTTGTTCTCCTGGTGACCTTGGGGGACTCTGAC
ATGCAGGATGGAAGGAAGAGACCACACCATGGTGCTTCAA..........

Sequence Detail Report

Gene Symbol (Gene ID) Adgrb3 (ENSMUSG00000033569)
Transcript ID ENSMUST00000151309
SNP Information
Strain :
Sequence Retrieve :
Exon translate :
CDS Start ( 1 ) - End ( 1523 )
-
Strand : forward reverse
Show sequence : nucleotide amino acid
Color information