MoG+ -Mouse Genome database with high added value-

Target CDS Information

Gene Symbol (Gene ID)

Pdlim7 (ENSMUSG00000021493)

Cross Reference

CCDS	CCDS49275.1
EMBL	AK003019, AK003338, AK010141, ...show all
Fantom	0710007K04, 1110003B01, 2310073F10, ...show all
GO	GO:0001503, GO:0001725, GO:0001726, ...show all
goslim_goa	GO:0003674, GO:0005575, GO:0005622, ...show all
MGI_trans_name	Pdlim7-004
OTTP	OTTMUSP00000043944
OTTT	OTTMUST00000082030
protein_id	AAH45528.1, AAH49565.1, BAB22725.1, ...show all
UCSC	uc007qrg.3

UniParc	UPI000024E58D
Uniprot/SWISSPROT	Q3TJD7
Vega_transcript	OTTMUST00000082030, Pdlim7-004
Vega_translation	214577, OTTMUSP00000043944

Definition

protein_id:ENSMUSP00000120465
translation:

MDSFKVVLEGPAPWGFRLQGGKDFNVPLSISRLTPGGKAAQAGVAVGDWVLNIDGENAGS
LTHIEAQNKIRACGERLSLGLSRAQPVQSKPQKALTPPADPPRYTFAPSASLNKTARPFG
APPPTDSTLRQNGQLLRQPVPDASKQRLMEDTEDWRPRPGTGQSRSFRILAHLTGTEFMQ
DPDEEFMKKSSQVPRTEAPAPASTIPQESWPGPTTPSPTSRPPWAVDPAFAERYAPDKTS
TVLTRHSQPATPTPLQNRTSIVQAAAGGGTGGGSNNGKTPVCHQCHKIIRGRYLVALGHA
YHPEEFVCSQCGKVLEEGGFFEEKGAIFCPSCYDVRYAPNCAKCKKKITGEIMHALKMTW
HVHCFTCAACKTPIRNRAFYMEEGAPYCERDYEKMFGTKCRGCDFKIDAGDRFLEALGFS
WHDTCFVCAICQINLEGKTFYSKKDKPLCKSHAFSHV

Chromosome

Length
Position(start - end)

13,758
55,498,648 - 55,512,407

Orient to Chromosome

minus

Link

Location : (13:55498648-55512407)
/

Detail Map

name	Pdlim7 (ENSMUSG00000021493)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : Pdlim7 note : PDZ and LIM domain 7 [Source:MGI Symbol;Acc:MGI:1914649]

name	Mir6945 (ENSMUSG00000099096)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : Mir6945 note : microRNA 6945 [Source:MGI Symbol;Acc:MGI:5531161]

name	Pdlim7 (ENSMUSG00000021493)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000155098

name	Pdlim7 (ENSMUSG00000021493)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000046246

name	Pdlim7 (ENSMUSG00000021493)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000069968

name	Pdlim7 (ENSMUSG00000021493)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000069929

name	Pdlim7 (ENSMUSG00000021493)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000131306

name	Pdlim7 (ENSMUSG00000021493)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000144288

name	Pdlim7 (ENSMUSG00000021493)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000153426

name	Pdlim7 (ENSMUSG00000021493) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS49275.1 Uniprot/SWISSPROT:Q3TJD7 Vega_transcript:OTTMUST00000082030 Vega_transcript:Pdlim7-004 UCSC:uc007qrg.3 Fantom:0710007K04 Fantom:1110003B01 Fantom:2310073F10 Fantom:I530016H17 EMBL:AK003019 EMBL:AK003338 EMBL:AK010141 EMBL:AK167476 EMBL:BC045528 EMBL:BC049565 GO:GO:0001503 GO:GO:0001725 GO:GO:0001726 GO:GO:0005515 GO:GO:0005634 GO:GO:0005737 GO:GO:0005925 GO:GO:0007275 GO:GO:0008270 GO:GO:0015629 GO:GO:0030036 GO:GO:0030154 MGI_trans_name:Pdlim7-004 Vega_translation:214577 Vega_translation:OTTMUSP00000043944 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005737 goslim_goa:GO:0005856 goslim_goa:GO:0007010 goslim_goa:GO:0008150 goslim_goa:GO:0030154 goslim_goa:GO:0043167 goslim_goa:GO:0043226 protein_id:AAH45528.1 protein_id:AAH49565.1 protein_id:BAB22725.1 protein_id:BAB26726.1 protein_id:BAC25017.1 protein_id:BAE39558.1 OTTP:OTTMUSP00000043944 OTTT:OTTMUST00000082030 UniParc:UPI000024E58D
definition	note : transcript_id=ENSMUST00000155098 protein_id : ENSMUSP00000120465 translation : MDSFKVVLEGPAPWGFRLQGGKDFNVPLSISRLTPGGKAAQAGVAVGDWVLNIDGENAGSLTHIEAQNKIRACGERLSLGLSRAQPVQSKPQKALTPPADPPRYTFAPSASLNKTARPFGAPPPTDSTLRQNGQLLRQPVPDASKQRLMEDTEDWRPRPGTGQSRSFRILAHLTGTEFMQDPDEEFMKKSSQVPRTEAPAPASTIPQESWPGPTTPSPTSRPPWAVDPAFAERYAPDKTSTVLTRHSQPATPTPLQNRTSIVQAAAGGGTGGGSNNGKTPVCHQCHKIIRGRYLVALGHAYHPEEFVCSQCGKVLEEGGFFEEKGAIFCPSCYDVRYAPNCAKCKKKITGEIMHALKMTWHVHCFTCAACKTPIRNRAFYMEEGAPYCERDYEKMFGTKCRGCDFKIDAGDRFLEALGFSWHDTCFVCAICQINLEGKTFYSKKDKPLCKSHAFSHV

name	Pdlim7 (ENSMUSG00000021493) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS49275.1 Uniprot/SWISSPROT:Q3TJD7 RefSeq_peptide:NP_001107560 RefSeq_mRNA:NM_001114088.2 Vega_transcript:OTTMUST00000082027 Vega_transcript:Pdlim7-001 UCSC:uc007qrg.3 Fantom:0710007K04 Fantom:1110003B01 Fantom:2310073F10 Fantom:I530016H17 EMBL:AK003019 EMBL:AK003338 EMBL:AK010141 EMBL:AK167476 EMBL:BC045528 EMBL:BC049565 GO:GO:0001503 GO:GO:0001725 GO:GO:0001726 GO:GO:0005515 GO:GO:0005515 GO:GO:0005634 GO:GO:0005634 GO:GO:0005737 GO:GO:0005925 GO:GO:0005925 GO:GO:0007275 GO:GO:0008270 GO:GO:0015629 GO:GO:0015629 GO:GO:0030036 GO:GO:0030154 GO:GO:0045669 MGI_trans_name:Pdlim7-001 Vega_translation:214578 Vega_translation:OTTMUSP00000043941 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005737 goslim_goa:GO:0005856 goslim_goa:GO:0007010 goslim_goa:GO:0008150 goslim_goa:GO:0030154 goslim_goa:GO:0043167 goslim_goa:GO:0043226 protein_id:AAH45528.1 protein_id:AAH49565.1 protein_id:BAB22725.1 protein_id:BAB26726.1 protein_id:BAC25017.1 protein_id:BAE39558.1 OTTP:OTTMUSP00000043941 OTTT:OTTMUST00000082027 UniParc:UPI000024E58D
definition	note : transcript_id=ENSMUST00000046246 protein_id : ENSMUSP00000047173 translation : MDSFKVVLEGPAPWGFRLQGGKDFNVPLSISRLTPGGKAAQAGVAVGDWVLNIDGENAGSLTHIEAQNKIRACGERLSLGLSRAQPVQSKPQKALTPPADPPRYTFAPSASLNKTARPFGAPPPTDSTLRQNGQLLRQPVPDASKQRLMEDTEDWRPRPGTGQSRSFRILAHLTGTEFMQDPDEEFMKKSSQVPRTEAPAPASTIPQESWPGPTTPSPTSRPPWAVDPAFAERYAPDKTSTVLTRHSQPATPTPLQNRTSIVQAAAGGGTGGGSNNGKTPVCHQCHKIIRGRYLVALGHAYHPEEFVCSQCGKVLEEGGFFEEKGAIFCPSCYDVRYAPNCAKCKKKITGEIMHALKMTWHVHCFTCAACKTPIRNRAFYMEEGAPYCERDYEKMFGTKCRGCDFKIDAGDRFLEALGFSWHDTCFVCAICQINLEGKTFYSKKDKPLCKSHAFSHV

name	Pdlim7 (ENSMUSG00000021493) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS49276.1 RefSeq_peptide:NP_001107559 RefSeq_mRNA:NM_001114087.2 Vega_transcript:OTTMUST00000082028 Vega_transcript:Pdlim7-002 Uniprot/SPTREMBL:Q8BVJ7 UCSC:uc007qrk.3 Fantom:6230400I01 EMBL:AK077998 EMBL:BC052698 EMBL:CH466546 EMBL:CT009762 GO:GO:0001725 GO:GO:0001726 GO:GO:0005515 GO:GO:0005634 GO:GO:0005737 GO:GO:0005925 GO:GO:0015629 GO:GO:0030036 MGI_trans_name:Pdlim7-002 Vega_translation:214579 Vega_translation:OTTMUSP00000043942 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005737 goslim_goa:GO:0005856 goslim_goa:GO:0007010 goslim_goa:GO:0008150 goslim_goa:GO:0043226 protein_id:AAH52698.1 protein_id:BAC37095.1 protein_id:EDL41207.1 OTTP:OTTMUSP00000043942 OTTT:OTTMUST00000082028 UniParc:UPI00000EA8E0
definition	note : transcript_id=ENSMUST00000069968 protein_id : ENSMUSP00000070153 translation : MDSFKVVLEGPAPWGFRLQGGKDFNVPLSISRLTPGGKAAQAGVAVGDWVLNIDGENAGSLTHIEAQNKIRACGERLSLGLSRAQPVQSKPQKALTPPADPPRYTFAPSASLNKTARPFGAPPPTDSTLRQNGQLLRQPVPDASKQRLMEDTEDWRPRPGTGQSRSFRILAHLTGTEFMQDPDEEFMKKSREKYVLELQSPRYTRLRDWHHQRSAHVLNVQS

name	Pdlim7 (ENSMUSG00000021493) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS26547.1 Uniprot/SWISSPROT:Q3TJD7 RefSeq_peptide:NP_080407 RefSeq_mRNA:NM_026131.4 Vega_transcript:OTTMUST00000082029 Vega_transcript:Pdlim7-003 UCSC:uc007qri.3 Fantom:0710007K04 Fantom:1110003B01 Fantom:2310073F10 Fantom:I530016H17 EMBL:AK003019 EMBL:AK003338 EMBL:AK010141 EMBL:AK167476 EMBL:BC045528 EMBL:BC049565 GO:GO:0001503 GO:GO:0001725 GO:GO:0001726 GO:GO:0005515 GO:GO:0005634 GO:GO:0005737 GO:GO:0005925 GO:GO:0007275 GO:GO:0008270 GO:GO:0015629 GO:GO:0030036 GO:GO:0030154 MGI_trans_name:Pdlim7-003 Vega_translation:214580 Vega_translation:OTTMUSP00000043943 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005737 goslim_goa:GO:0005856 goslim_goa:GO:0007010 goslim_goa:GO:0008150 goslim_goa:GO:0030154 goslim_goa:GO:0043167 goslim_goa:GO:0043226 protein_id:AAH45528.1 protein_id:AAH49565.1 protein_id:BAB22725.1 protein_id:BAB26726.1 protein_id:BAC25017.1 protein_id:BAE39558.1 OTTP:OTTMUSP00000043943 OTTT:OTTMUST00000082029 UniParc:UPI00000E72B2
definition	note : transcript_id=ENSMUST00000069929 protein_id : ENSMUSP00000064219 translation : MDSFKVVLEGPAPWGFRLQGGKDFNVPLSISRLTPGGKAAQAGVAVGDWVLNIDGENAGSLTHIEAQNKIRACGERLSLGLSRAQPVQSKPQKVQTSDKQLLRQPVPDASKQRLMEDTEDWRPRPGTGQSRSFRILAHLTGTEFMQDPDEEFMKKSREKYVLELQSPRYTRLRDWHHQRSAHVLNVQS

name	Pdlim7 (ENSMUSG00000021493) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000082033 Vega_transcript:Pdlim7-007 Uniprot/SPTREMBL:B8JJB3 UCSC:uc007qrl.3 EMBL:CH466546 EMBL:CT009762 GO:GO:0001725 GO:GO:0001726 GO:GO:0005515 GO:GO:0005634 GO:GO:0005737 GO:GO:0005925 GO:GO:0015629 GO:GO:0030036 MGI_trans_name:Pdlim7-007 Vega_translation:214581 Vega_translation:OTTMUSP00000043945 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005737 goslim_goa:GO:0005856 goslim_goa:GO:0007010 goslim_goa:GO:0008150 goslim_goa:GO:0043226 protein_id:EDL41208.1 OTTP:OTTMUSP00000043945 OTTT:OTTMUST00000082033 UniParc:UPI000154ABCE
definition	note : transcript_id=ENSMUST00000131306 protein_id : ENSMUSP00000119753 translation : MDSFKVVLEGPAPWGFRLQGGKDFNVPLSISRLTPGGKAAQAGVAVGDWVLNIDGENAGSLTHIEAQNKIRACGERLSLGLSRAQPVQSKPQKALTPPADPPRYTFAPSASLNKTARPFGAPPPTDSTLRQNGYVSPCPSTPTSAHCLVLSQAHTQAACYRSVCAGPQPLNRVAATPGGRVGLLLFHRLCPAEQPGVSLCCGPAESHKLVATSPPSPPL

name	Pdlim7 (ENSMUSG00000021493) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000082034 Vega_transcript:Pdlim7-008 Uniprot/SPTREMBL:B8JJB2 UCSC:uc007qrl.3 EMBL:CT009762 GO:GO:0001725 GO:GO:0001726 GO:GO:0005515 GO:GO:0005634 GO:GO:0005737 GO:GO:0005925 GO:GO:0015629 GO:GO:0030036 MGI_trans_name:Pdlim7-008 Vega_translation:214582 Vega_translation:OTTMUSP00000043946 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005737 goslim_goa:GO:0005856 goslim_goa:GO:0007010 goslim_goa:GO:0008150 goslim_goa:GO:0043226 OTTP:OTTMUSP00000043946 OTTT:OTTMUST00000082034 UniParc:UPI0001889D1B
definition	note : transcript_id=ENSMUST00000144288 protein_id : ENSMUSP00000121614 translation : MDSFKVVLEGPAPWGFRLQGGKDFNVPLSISRLTPGGKAAQAGVAVGDWVLNIDGENAGSLTHIEAQNKIRACGERLSLGLSRAQPVQSKPQKALTPPADPPRYTFAPSASLNKTARPFGAPPP

name	Pdlim7 (ENSMUSG00000021493) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000082035 Vega_transcript:Pdlim7-009 Uniprot/SPTREMBL:B8JJB1 EMBL:CT009762 GO:GO:0001725 GO:GO:0001726 GO:GO:0005515 GO:GO:0005634 GO:GO:0005737 GO:GO:0005925 GO:GO:0015629 GO:GO:0030036 MGI_trans_name:Pdlim7-009 Vega_translation:214583 Vega_translation:OTTMUSP00000043947 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005737 goslim_goa:GO:0005856 goslim_goa:GO:0007010 goslim_goa:GO:0008150 goslim_goa:GO:0043226 OTTP:OTTMUSP00000043947 OTTT:OTTMUST00000082035 UniParc:UPI0001889D1C
definition	note : transcript_id=ENSMUST00000153426 protein_id : ENSMUSP00000118867 translation : MDSFKVVLEGPAPWGFRLQGGKDFNVPLSISRLTPGGKAAQAGVAVGDWVLNIDGENA

name
type	STS
link
xref	UniSTS_NUM:164527 UniSTS:AV007930 WI_MRC-RH:512529
definition	note : map_weight=1 standard_name : AV007930

name
type	misc_feature
link
xref
definition	note : contig CT009762.8 1..175032(-1)

name	Pdlim7 (ENSMUSG00000021493)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000082032 Vega_transcript:OTTMUST00000082032 UCSC:uc007qrf.3 MGI_trans_name:Pdlim7-006 OTTT:OTTMUST00000082032
definition	note : retained_intron note : transcript_id=ENSMUST00000153230

name	Pdlim7 (ENSMUSG00000021493)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000082031 Vega_transcript:OTTMUST00000082031 UCSC:uc007qrf.3 MGI_trans_name:Pdlim7-005 OTTT:OTTMUST00000082031
definition	note : retained_intron note : transcript_id=ENSMUST00000128910

name	Pdlim7 (ENSMUSG00000021493)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000082037 Vega_transcript:OTTMUST00000082037 MGI_trans_name:Pdlim7-011 OTTT:OTTMUST00000082037
definition	note : retained_intron note : transcript_id=ENSMUST00000128911

name	Pdlim7 (ENSMUSG00000021493)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000082036 Vega_transcript:OTTMUST00000082036 MGI_trans_name:Pdlim7-010 OTTT:OTTMUST00000082036
definition	note : retained_intron note : transcript_id=ENSMUST00000136583

name	Mir6945 (ENSMUSG00000099096)
type	misc_RNA
link	VEGA Ensembl MGI
xref	RefSeq_ncRNA:NR_105910 UCSC:uc033glz.1 MGI_trans_name:Mir6945-201 RNACentral:URS000075CD8D
definition	note : miRNA note : transcript_id=ENSMUST00000184300

Polymorphisms Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Pdlim7 (ENSMUSG00000021493)
Transcript ID	ENSMUST00000155098

Reports
substitution
cSNPs	3
Insertion	17
Deletion	28
SNPs	+1kb 55513722(c.-1315T>C), 55513790(c.-1383T>C), 55513791(c.-1384C>T), 55514196(c.-1789C>T), 55514464(c.-2057C>T), 55514476(c.-2069G>A), 55514692(c.-2285C>A), 55514748(c.-2341G>T), 55514821(c.-2414G>A), 55514998(c.-2591C>A), 55515091(c.-2684C>T), 55515206(c.-2799G>A), 55515440(c.-3033G>A), 55515731(c.-3324C>T), 55515910(c.-3503G>A), 55516075(c.-3668G>A), 55516097(c.-3690C>A), 55517176(c.-4769A>G), 55517425(c.-5018G>C), 55517440(c.-5033G>C), 55517595(c.-5188T>C), 55517661(c.-5254G>C), 55517771(c.-5364A>G), 55517964(c.-5557A>C), 55518014(c.-5607C>A), 55518099(c.-5692A>T), 55518108(c.-5701C>T), 55518137(c.-5730C>T), 55518218(c.-5811T>C), 5'UTR 55513409(c.-54T>G), 55513437(c.-82G>C), CDS 55499189(c.1083C>T), 55504745(c.963C>T), 55509035(c.105C>T), 3'UTR 55498613(c.35A>G), 55498616(c.32G>T), INTRON 55496396(c.74-376A>G), 55496586(c.74-566T>C), 55496765(c.74-745C>T), 55496848(c.74-828A>G), 55496927(c.74-907G>A), 55497036(c.74-1016C>T), 55497130(c.74-1110C>T), 55497371(c.73+1204G>C), 55497745(c.73+830T>C), 55497753(c.73+822G>A), 55498171(c.73+404G>A), 55498409(c.73+166C>G), 55499044(c.1172-35A>T), 55499072(c.1171+29G>A), 55499264(c.1051-43T>C), 55499668(c.1051-447C>T), 55499673(c.1051-452G>T), 55499694(c.1051-473C>G), 55499902(c.1051-681C>G), 55500000(c.1051-779G>A), 55500345(c.1051-1124G>C), 55500440(c.1051-1219G>A), 55500506(c.1051-1285T>C), 55500629(c.1051-1408T>G), 55500729(c.1051-1508T>G), 55500748(c.1051-1527C>T), 55500795(c.1051-1574T>G), 55500852(c.1051-1631G>A), 55500856(c.1051-1635C>T), 55501498(c.1051-2277T>C), 55501512(c.1051-2291C>A), 55501673(c.1051-2452T>A), 55501818(c.1051-2597A>G), 55501847(c.1051-2626G>C), 55501848(c.1051-2627A>G), 55501858(c.1051-2637A>G), 55501889(c.1051-2668G>C), 55501932(c.1051-2711G>A), 55501959(c.1050+2699T>C), 55502618(c.1050+2040T>C), 55502684(c.1050+1974C>T), 55502727(c.1050+1931T>C), 55503099(c.1050+1559A>G), 55503110(c.1050+1548G>A), 55503146(c.1050+1512A>G), 55503212(c.1050+1446A>G), 55503233(c.1050+1425C>T), 55503287(c.1050+1371G>A), 55503298(c.1050+1360T>C), 55503301(c.1050+1357T>G), 55503360(c.1050+1298T>G), 55503454(c.1050+1204G>T), 55503522(c.1050+1136G>A), 55503645(c.1050+1013G>A), 55503666(c.1050+992T>G), 55503901(c.1050+757T>A), 55503913(c.1050+745T>C), 55503918(c.1050+740A>T), 55503928(c.1050+730T>C), 55504008(c.1050+650C>A), 55504906(c.870-68A>C), 55504913(c.870-75C>T), 55505054(c.870-216T>C), 55505139(c.870-301G>T), 55505207(c.870-369G>T), 55505474(c.869+460G>C), 55505540(c.869+394C>G), 55505742(c.869+192C>T), 55506426(c.573-59G>A), 55506442(c.573-75G>A), 55506683(c.573-316T>C), 55506866(c.572+464A>G), 55506963(c.572+367C>T), 55507320(c.572+10T>C), 55507706(c.399-82G>T), 55507780(c.399-156T>C), 55507952(c.398+256A>G), 55507968(c.398+240C>T), 55507978(c.398+230G>C), 55507980(c.398+228T>A), 55508154(c.398+54C>T), 55508374(c.280-48T>C), 55508831(c.249-21T>C), 55509053(c.97-10T>C), 55509077(c.97-34G>T), 55509250(c.97-207A>T), 55509368(c.97-325C>T), 55509915(c.97-872G>C), 55509962(c.97-919A>T), 55509966(c.97-923A>G), 55510002(c.97-959C>T), 55510012(c.97-969T>C), 55510058(c.97-1015C>T), 55510171(c.97-1128C>A), 55510297(c.97-1254G>C), 55510300(c.97-1257C>A), 55510338(c.97-1295C>T), 55510391(c.97-1348G>C), 55510417(c.97-1374T>G), 55510633(c.97-1590G>A), 55510937(c.96+1375G>A), 55510946(c.96+1366T>C), 55510970(c.96+1342C>G), 55510993(c.96+1319C>G), 55511248(c.96+1064A>T), 55511502(c.96+810C>A), 55511534(c.96+778T>C), 55511606(c.96+706G>T), 55511655(c.96+657A>G), 55511673(c.96+639A>G), 55511929(c.96+383C>T), 55512015(c.96+297A>G), 55512581(c.-11-163G>C), 55512632(c.-11-214G>A), 55513251(c.-12+116T>C), -1kb 55490967(c.7681C>T), 55491018(c.7630A>T), 55491686(c.6962C>T), 55492408(c.6240A>G), 55492587(c.6061T>C), 55492735(c.5913T>C), 55492993(c.5655C>T), 55493092(c.5556G>A), 55494577(c.4071G>A), 55495137(c.3511G>T), 55495232(c.3416A>G), 55495263(c.3385G>A), 55495264(c.*3384C>T),
Insertions	+1kb 55514300 (c.-1894_-1893insGG), 55514584 (c.-2178_-2177insGAGAGAG), 5'UTR CDS 3'UTR 55498640 (c.7_8insCCCAT), INTRON 55497347 (c.73+1227dupG), 55498480 (c.73+92_73+94dupTCA), 55499281 (c.1051-61dupC), 55502017 (c.1050+2640_1050+2641insAAAAA), 55502483 (c.1050+2173_1050+2174dupCG), 55506559 (c.573-194_573-193dupCA), 55507138 (c.572+190_572+191dupCT), 55508172 (c.398+34_398+35dupTG), 55509689 (c.97-647_97-646insCGCT), 55510373 (c.97-1331_97-1330insCTT), 55511724 (c.96+587_96+588insGT), -1kb 55493287 (c.5360_5361insGA), 55493376 (c.5271_5272insAAA), 55495732 (c.2915_*2916insTTT),
Deletions	+1kb 55514496 (c.-2094_-2090delGGTTT), 55514729 (c.-2329_-2323delGTGGGAA), 55515462 (c.-3057_-3056delGT), 55516513 (c.-4107delA), 55517308 (c.-4903_-4902delCA), 55518366 (c.-5960delT), 55518401 (c.-5996_-5995delGG), 5'UTR CDS 3'UTR INTRON 55497223 (c.74-1209_74-1204delTTTTTG), 55497233 (c.74-1218_74-1214delTTTTT), 55497670 (c.73+902_73+904delAGG), 55497850 (c.73+722_73+724delTTT), 55498033 (c.73+541delG), 55499418 (c.1051-198delG), 55499781 (c.1051-561delG), 55501297 (c.1051-2078_1051-2077delCT), 55501933 (c.1051-2714_1051-2713delCG), 55503808 (c.1050+849delT), 55505137 (c.870-300delA), 55505753 (c.869+179_869+180delGT), 55507981 (c.398+225_398+226delAA), 55508146 (c.398+60_398+61delCA), 55508525 (c.280-200delC), 55511810 (c.96+501delG), 55511813 (c.96+498delG), -1kb 55493358 (c.5289delC), 55494898 (c.3746_3749delGAAA), 55495305 (c.3342delG), 55495704 (c.2940_*2943delTCTT),
coding sequence substitutions
premature termination by the nucleotide substitution	0
synonymous num	3
non-synonymous num	0
synonymous substitutions	55499189 (p.His361His), 55504745 (p.Phe321Phe), 55509035 (p.Pro35Pro),
non-synonymous substitutions
B6 transcript (ENSMUST00000155098)	MDSFKVVLEGPAPWGFRLQGGKDFNVPLSISRLTPGGKAAQAGVAVGDWVLNIDGENAGS LTHIEAQNKIRACGERLSLGLSRAQPVQSKPQKALTPPADPPRYTFAPSASLNKTARPFG APPPTDSTLRQNGQLLRQPVPDASKQRLMEDTEDWRPRPGTGQSRSFRILAHLTGTEFMQ DPDEEFMKKSSQVPRTEAPAPASTIPQESWPGPTTPSPTSRPPWAVDPAFAERYAPDKTS TVLTRHSQPATPTPLQNRTSIVQAAAGGGTGGGSNNGKTPVCHQCHKIIRGRYLVALGHA YHPEEFVCSQCGKVLEEGGFFEEKGAIFCPSCYDVRYAPNCAKCKKKITGEIMHALKMTW HVHCFTCAACKTPIRNRAFYMEEGAPYCERDYEKMFGTKCRGCDFKIDAGDRFLEALGFS WHDTCFVCAICQINLEGKTFYSKKDKPLCKSHAFSHV*
MSMv4 transcript	MDSFKVVLEGPAPWGFRLQGGKDFNVPLSISRLTPGGKAAQAGVAVGDWVLNIDGENAGS LTHIEAQNKIRACGERLSLGLSRAQPVQSKPQKALTPPADPPRYTFAPSASLNKTARPFG APPPTDSTLRQNGQLLRQPVPDASKQRLMEDTEDWRPRPGTGQSRSFRILAHLTGTEFMQ DPDEEFMKKSSQVPRTEAPAPASTIPQESWPGPTTPSPTSRPPWAVDPAFAERYAPDKTS TVLTRHSQPATPTPLQNRTSIVQAAAGGGTGGGSNNGKTPVCHQCHKIIRGRYLVALGHA YHPEEFVCSQCGKVLEEGGFFEEKGAIFCPSCYDVRYAPNCAKCKKKITGEIMHALKMTW HVHCFTCAACKTPIRNRAFYMEEGAPYCERDYEKMFGTKCRGCDFKIDAGDRFLEALGFS WHDTCFVCAICQINLEGKTFYSKKDKPLCKSHAFSHV*
homology	100.00 (458 / 458)

Exon Detail Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Pdlim7 (ENSMUSG00000021493)
Transcript ID	ENSMUST00000155098


..........ACTCACTACATAGATCAGTCAGTCTGGCCTTGAACTCAGAGACCCACCTG
AAGAGGATTTCTTCAAGGATGACAACTCCCATAAGAATTTATGTACTTGGGACAATGATG
GGGAAGAGGGGGTGTGATGATGGGGGGGCTGGGCAAGGGGAGGCTGTGCACCTCTCTACT
GACTCAAACATTCAGGAGAGCTCAGCTTTTCCTTCTGCCCACCCTTGGCTAAGACCGAGG
CTAAAGCAGGGGTTCTGAGAACACTCCGTGGCAGCCCCTTCCATCCCAACCGCATTGGAA
GAACTGTGTACTCTGGACTGGGGTTAAATGGGAAACAATCCATTCCAATAGTGGTTCTGG
GGGCTCTGGGTGGAAGTCCCATGGCTGTGGACTCTACTTACACCGTCAGACAACAAGTGG
CGCTAAGCCCGCCCCCGTTGGCTCTTACTATGTATGTATTTACTTGTTTGTTATATCCTG
CAAGCCTTTGGTTGGGTTTGGTGTTGAGGACTGAAACAAGGGCCTCCAGAGAGCTTAGCT
ACTGAGCTCCACCACTAAGCTACATCCCGAACACCAGGAAGCCTAACTTGAAACTACCCT
ATCTCGCTTCTCCAGTTCCTAGAGAATCTGAAATCTGATGATGCTGACAATATTGACTCC
TAACAGTATCCCTAACAGAAAAGTGTTACCATGCCATTTTCCTCTACAAGAGAATACGGT
GAGAGACCAATCAACTCTGGGGTTTCAAACGGATGCTTTCCTCCACTCCGCCAGTGGGAG
GCGCAAGGGGCTTGGGCGAGAGCCTGAAGCGGGGCACAGGCTGGGCAGCGACCCGACTGG
CGAGGGTAAGTGCCCGATCTCACCTTCCCTCTCCTGGAGACTCAGGGTTTTTTGACTGGG
TGGGGCCTCCCACCGACCCCGGGATGTCCACTCGTTTGGCCTGGGGAGGGCGTGGCCTAG
GGCTCCGCCCCCTTCCGCGGGCTCAAAAGGCGCGGCGTCCGCGGAGGCGG
GCTCAGAGCGCAGCGGCGGATCCCATCGCGGCTCCCGGAGGCTGCCAGGCAGCGGCCCAGGCGGGCACTCAG
GTACCGGCGTCCGCGAGGGGGTTCC..........AGACACTTTCTCTTCTTCCTCACAG
GAGCAGGCACGATGGATTCCTTCAAGGTGGTGCTGGAAGGGCCAGCCCCTTGGGGCTTCCGTCTGCAAGGGGGCAAGGACTTCAATGTGCCCCTCTCTATCTCTCGG
GTGAGCCTAGGTGGGGGAACAAACT..........GACCTCTGACCATTCCTCTCTACAG
CTCACGCCTGGAGGCAAAGCTGCACAGGCCGGTGTGGCTGTGGGAGACTGGGTACTGAATATTGACGGTGAGAACGCGGGCAGCCTCACGCACATCGAAGCCCAGAACAAGATCCGCGCCTGTGGGGAGCGCCTCAGCCTGGGTCTTAGCAG
GTACAGGTGCTGACAGGCAGAAGGG..........TGACCGCGTCTCTCTTCTTCTCCAG
AGCCCAGCCTGTTCAGAGCAAACCACAGAAG
GTAGGTTATACAGGAGATGTCCTGG..........CCTGCCCGGCTCTGTCTCTGCCCAG
GCCCTGACCCCTCCCGCCGACCCCCCGAGGTACACTTTTGCACCAAGCGCCTCCCTCAACAAGACGGCCCGGCCCTTCGGGGCACCCCCACCTACTGACAGCACCCTGCGGCAGAATGG
GTATGTCAGCCCCTGCCCATCCACT..........GTTCTGAGCTCTGCCCTTCCCATAG
ACAGTTGCTCAGACAGCCGGTCCCCGATGCCAGCAAGCAGCGGCTGATGGAGGATACCGAAGACTGGCGGCCGCGGCCGGGGACAGGCCAGTCCCGCTCCTTCCGCATCCTTGCCCACCTCACGGGCACAGAGTTCA
GTAAGTGCTGGCCCAGGACAGGGCA..........TCAATGCCTGCCTCTGTCCTCTCAG
TGCAAGACCCGGATGAGGAATTCATGAAGAAGTCAAG
GTAAAAGCTCGGGCGCTAACCCCTC..........GGGCCTTGAATGGCAGATCTTACAG
CCAGGTGCCCAGGACAGAAGCCCCAGCCCCAGCCTCAACTATACCCCAGGAATCCTGGCCTG
GTAAGATTTGGGGCTGAAGAAGGGT..........TGGATCTACTTTCTTTGGCTGTCAG
GCCCCACCACTCCCAGCCCCACCAGCCGCCCACCCTGGGCTGTGGATCCTGCATTTGCTGAGCGCTATGCCCCAGACAAAACCAGCACAGTGCTGACCCGGCACAGCCAGCCAGCCACACCCACGCCTCTGCAGAACCGCACCTCCATAGTGCAGGCCGCAGCTGGAGGGGGCACAGGAGGGGGCAGCAACAACGGCAAGACTCCTGTATGCCACCAGTGCCACAAGATCATCCG
GTAAGTGTTCCCTTCTAGTGCTGAT..........TTGCATATATTCCCTCTCTTTGCAG
CGGCCGCTACCTGGTAGCACTGGGCCACGCATACCATCCCGAGGAGTTTGTGTGCAGCCAGTGTGGAAAGGTCCTGGAAGAGGGTGGCTTCTTTGAGGAGAAGGGAGCTATCTTTTGCCCCTCCTGCTATGATGTGCGCTATGCACCCAACTGTGCCAAATGCAAGAAGAAGATCACTGGA
GTGAGTGGGGCTGGCAGGTGGGCAG..........CTGATGTGACTCTGGCCCATTCCAG
GAGATCATGCATGCTCTGAAGATGACCTGGCATGTCCATTGCTTCACCTGTGCTGCCTGCAAAACGCCAATTCGCAACAGAGCCTTTTACATGGAAGAAGGGGCCCCCTACTGCGAGCGAG
GTGTGCGGTTGCCCAGAGAAGGCAA..........CCCTCTCTTCTGTCCCCATTACCAG
ACTATGAGAAGATGTTTGGCACAAAATGTCGAGGCTGTGACTTCAAGATTGATGCTGGAGACCGCTTCCTGGAAGCGCTGGGCTTCAGCTGGCATGACACATGCTTTGTTTGCGCA
GTAAGCACCTCCCTCCCCTCTCCCC..........ACTGGACCTTCATTGTTGCCCTCAG
ATATGTCAGATCAACTTGGAAGGAAAGACCTTCTACTCCAAGAAGGACAAGCCCCTCTGCAAGAGCCACGCCTTCTCTCACGTATGAGTACCTCACGAGATTGCCACCCTACTCCGCCTAAGGGGTGGAAAACTAGAGAGATCACCCTCGACCTGCCTGG
GTAGGGCTGGCAGTAGCTGTCCCAG..........GCGTATTAAACACAATGTCTTTTAG
TTCACAGGGAAACGTACTTACTCTCTCCTGCTTCTGTTGAACTGTGAAGCCCTCTCAGTCCATCCTCGGTTTCCATGGAGACCAAAGAGCAAGAACAGAAGGGTGGGTGGGAATTGCTGCCAGGTGCCCTTCTGGGGGTAGCCACCCCTTGTCCTGAACTAAGAGGCTGCCATGTCCCCCAGGCAGTGCAGCCAGATTTGCCAGATTAGCAACAGTGTGTACAGGT
TCATGTGTTTCGTGTGACAGCTGTTTTTTGGGGGTTTGTTTTTGTTTTTTTGTTTTTTTT
TTGTTTTTTTTATTGGCAGCTGCAATTCTTTTTTTTTTTTTTTTTTAAATCCCACTTTAA
AAACAATAAATGCAGGCCAAATCCAGTGTGAGGATAGCTAGGGACTCAGCACAGAAAGCT
GACGGGACCCGAAACAGTACCGTAGAGCTGGGCACAGAAAGCAGAGGGAGCCGCCAGGGA
CGGCATGACAGACAGCCTGCAGGGTGCTCCGGCAGGGCTCTCCACACAGGCCAAGAGCAT
TTCCAGAAGTTGCCAACACTGTCAACCAGGCAGATAAGGCCAAGGAGTCCCCATGGTATT
TCAAAACAAGGTGACATTTGCCAGATCAGTTTAGCAGAGAGCTGGGCCACTGCCAGGATT
AAAGAGTGAACAGGTGCATGTGTGAAGAGCGTGCAGACAGCCCTTGAGAGGCATGCTGGG
GGCGGGGCGGGGGGGGGCACAGTCAGCTAAGCACAGATATGGCTAGGGAGTAGGGAGGGG
GCATGCCGGAGCGCGGCTTGAAGATGGGAAGTTCGAGGGTCCAAGATAGGGGCAAGGAAA
ATCACTGAGGGCTGTGGGAGGAGAGAGATACCACACGCCTGTCTGGATCCCAGGGCGTCT
AGAGAGCAAGTGCTCGGAGCTAGCTATCCTACCACCTGTTAGGAGGGATGGTTCAAGCCA
GGCATGGTGGCTGATGCCTCTAATCCCAACACTCTGGGAGGCTGAGGCAGGAGGAAGGTG
GGAGTTTCATGGCAGACTGCTATAAGCGCTAGGCAAGCCAGAGCTGCACATTAAGACCTG
CTTTAAAAAAAAGAAAAGAAAAGAAAAAAGAAAAAAAGAAAAAAGAAAGAAAGAAACAGG
AACCTTAGACTCAGAGAAGCAAAGGTGACCTGTCCAGAGCCACCCAGCTGGAATGACCAG
AAACCGCTAAGTATGGACGAAAGGATCAGGCACTTCCAAC..........

No.	Exon / Intron	Start	End	Start Phase	End Phase	Length	Sequence
	5' upstream sequence						..........ACTCACTACATAGATCAGTCAGTCTGGCCTTGAACTCAGAGACCCACCTG AAGAGGATTTCTTCAAGGATGACAACTCCCATAAGAATTTATGTACTTGGGACAATGATG GGGAAGAGGGGGTGTGATGATGGGGGGGCTGGGCAAGGGGAGGCTGTGCACCTCTCTACT GACTCAAACATTCAGGAGAGCTCAGCTTTTCCTTCTGCCCACCCTTGGCTAAGACCGAGG CTAAAGCAGGGGTTCTGAGAACACTCCGTGGCAGCCCCTTCCATCCCAACCGCATTGGAA GAACTGTGTACTCTGGACTGGGGTTAAATGGGAAACAATCCATTCCAATAGTGGTTCTGG GGGCTCTGGGTGGAAGTCCCATGGCTGTGGACTCTACTTACACCGTCAGACAACAAGTGG CGCTAAGCCCGCCCCCGTTGGCTCTTACTATGTATGTATTTACTTGTTTGTTATATCCTG CAAGCCTTTGGTTGGGTTTGGTGTTGAGGACTGAAACAAGGGCCTCCAGAGAGCTTAGCT ACTGAGCTCCACCACTAAGCTACATCCCGAACACCAGGAAGCCTAACTTGAAACTACCCT ATCTCGCTTCTCCAGTTCCTAGAGAATCTGAAATCTGATGATGCTGACAATATTGACTCC TAACAGTATCCCTAACAGAAAAGTGTTACCATGCCATTTTCCTCTACAAGAGAATACGGT GAGAGACCAATCAACTCTGGGGTTTCAAACGGATGCTTTCCTCCACTCCGCCAGTGGGAG GCGCAAGGGGCTTGGGCGAGAGCCTGAAGCGGGGCACAGGCTGGGCAGCGACCCGACTGG CGAGGGTAAGTGCCCGATCTCACCTTCCCTCTCCTGGAGACTCAGGGTTTTTTGACTGGG TGGGGCCTCCCACCGACCCCGGGATGTCCACTCGTTTGGCCTGGGGAGGGCGTGGCCTAG GGCTCCGCCCCCTTCCGCGGGCTCAAAAGGCGCGGCGTCCGCGGAGGCGG
1	EXON 1	55,513,367	55,513,438	-	-	72	GCTCAGAGCGCAGCGGCGGATCCCATCGCGGCTCCCGGAGGCTGCCAGGCAGCGGCCCAG GCGGGCACTCAG
	INTRON 1 - 2	55,512,419	55,513,366			948	GTACCGGCGTCCGCGAGGGGGTTCC..........AGACACTTTCTCTTCTTCCTCACAG
2	EXON 2	55,512,312	55,512,418	-	0	107	GAGCAGGCACGATGGATTCCTTCAAGGTGGTGCTGGAAGGGCCAGCCCCTTGGGGCTTCC GTCTGCAAGGGGGCAAGGACTTCAATGTGCCCCTCTCTATCTCTCGG
	INTRON 2 - 3	55,509,044	55,512,311			3,268	GTGAGCCTAGGTGGGGGAACAAACT..........GACCTCTGACCATTCCTCTCTACAG
3	EXON 3	55,508,892	55,509,043	0	2	152	CTCACGCCTGGAGGCAAAGCTGCACAGGCCGGTGTGGCTGTGGGAGACTGGGTACTGAAT ATTGACGGTGAGAACGCGGGCAGCCTCACGCACATCGAAGCCCAGAACAAGATCCGCGCC TGTGGGGAGCGCCTCAGCCTGGGTCTTAGCAG
	INTRON 3 - 4	55,508,811	55,508,891			81	GTACAGGTGCTGACAGGCAGAAGGG..........TGACCGCGTCTCTCTTCTTCTCCAG
4	EXON 4	55,508,780	55,508,810	2	0	31	AGCCCAGCCTGTTCAGAGCAAACCACAGAAG
	INTRON 4 - 5	55,508,327	55,508,779			453	GTAGGTTATACAGGAGATGTCCTGG..........CCTGCCCGGCTCTGTCTCTGCCCAG
5	EXON 5	55,508,208	55,508,326	0	2	119	GCCCTGACCCCTCCCGCCGACCCCCCGAGGTACACTTTTGCACCAAGCGCCTCCCTCAAC AAGACGGCCCGGCCCTTCGGGGCACCCCCACCTACTGACAGCACCCTGCGGCAGAATGG
	INTRON 5 - 6	55,507,625	55,508,207			583	GTATGTCAGCCCCTGCCCATCCACT..........GTTCTGAGCTCTGCCCTTCCCATAG
6	EXON 6	55,507,488	55,507,624	2	1	137	ACAGTTGCTCAGACAGCCGGTCCCCGATGCCAGCAAGCAGCGGCTGATGGAGGATACCGA AGACTGGCGGCCGCGGCCGGGGACAGGCCAGTCCCGCTCCTTCCGCATCCTTGCCCACCT CACGGGCACAGAGTTCA
	INTRON 6 - 7	55,507,367	55,507,487			121	GTAAGTGCTGGCCCAGGACAGGGCA..........TCAATGCCTGCCTCTGTCCTCTCAG
7	EXON 7	55,507,330	55,507,366	1	2	37	TGCAAGACCCGGATGAGGAATTCATGAAGAAGTCAAG
	INTRON 7 - 8	55,506,368	55,507,329			962	GTAAAAGCTCGGGCGCTAACCCCTC..........GGGCCTTGAATGGCAGATCTTACAG
8	EXON 8	55,506,306	55,506,367	2	1	62	CCAGGTGCCCAGGACAGAAGCCCCAGCCCCAGCCTCAACTATACCCCAGGAATCCTGGCC TG
	INTRON 8 - 9	55,506,169	55,506,305			137	GTAAGATTTGGGGCTGAAGAAGGGT..........TGGATCTACTTTCTTTGGCTGTCAG
9	EXON 9	55,505,934	55,506,168	1	2	235	GCCCCACCACTCCCAGCCCCACCAGCCGCCCACCCTGGGCTGTGGATCCTGCATTTGCTG AGCGCTATGCCCCAGACAAAACCAGCACAGTGCTGACCCGGCACAGCCAGCCAGCCACAC CCACGCCTCTGCAGAACCGCACCTCCATAGTGCAGGCCGCAGCTGGAGGGGGCACAGGAG GGGGCAGCAACAACGGCAAGACTCCTGTATGCCACCAGTGCCACAAGATCATCCG
	INTRON 9 - 10	55,504,839	55,505,933			1,095	GTAAGTGTTCCCTTCTAGTGCTGAT..........TTGCATATATTCCCTCTCTTTGCAG
10	EXON 10	55,504,658	55,504,838	2	0	181	CGGCCGCTACCTGGTAGCACTGGGCCACGCATACCATCCCGAGGAGTTTGTGTGCAGCCA GTGTGGAAAGGTCCTGGAAGAGGGTGGCTTCTTTGAGGAGAAGGGAGCTATCTTTTGCCC CTCCTGCTATGATGTGCGCTATGCACCCAACTGTGCCAAATGCAAGAAGAAGATCACTGG A
	INTRON 10 - 11	55,499,222	55,504,657			5,436	GTGAGTGGGGCTGGCAGGTGGGCAG..........CTGATGTGACTCTGGCCCATTCCAG
11	EXON 11	55,499,101	55,499,221	0	1	121	GAGATCATGCATGCTCTGAAGATGACCTGGCATGTCCATTGCTTCACCTGTGCTGCCTGC AAAACGCCAATTCGCAACAGAGCCTTTTACATGGAAGAAGGGGCCCCCTACTGCGAGCGA G
	INTRON 11 - 12	55,499,010	55,499,100			91	GTGTGCGGTTGCCCAGAGAAGGCAA..........CCCTCTCTTCTGTCCCCATTACCAG
12	EXON 12	55,498,894	55,499,009	1	0	116	ACTATGAGAAGATGTTTGGCACAAAATGTCGAGGCTGTGACTTCAAGATTGATGCTGGAG ACCGCTTCCTGGAAGCGCTGGGCTTCAGCTGGCATGACACATGCTTTGTTTGCGCA
	INTRON 12 - 13	55,498,735	55,498,893			159	GTAAGCACCTCCCTCCCCTCTCCCC..........ACTGGACCTTCATTGTTGCCCTCAG
13	EXON 13	55,498,575	55,498,734	0	-	160	ATATGTCAGATCAACTTGGAAGGAAAGACCTTCTACTCCAAGAAGGACAAGCCCCTCTGC AAGAGCCACGCCTTCTCTCACGTATGAGTACCTCACGAGATTGCCACCCTACTCCGCCTA AGGGGTGGAAAACTAGAGAGATCACCCTCGACCTGCCTGG
	INTRON 13 - 14	55,496,021	55,498,574			2,554	GTAGGGCTGGCAGTAGCTGTCCCAG..........GCGTATTAAACACAATGTCTTTTAG
14	EXON 14	55,495,795	55,496,020	-	-	226	TTCACAGGGAAACGTACTTACTCTCTCCTGCTTCTGTTGAACTGTGAAGCCCTCTCAGTC CATCCTCGGTTTCCATGGAGACCAAAGAGCAAGAACAGAAGGGTGGGTGGGAATTGCTGC CAGGTGCCCTTCTGGGGGTAGCCACCCCTTGTCCTGAACTAAGAGGCTGCCATGTCCCCC AGGCAGTGCAGCCAGATTTGCCAGATTAGCAACAGTGTGTACAGGT
	3' upstream sequence						TCATGTGTTTCGTGTGACAGCTGTTTTTTGGGGGTTTGTTTTTGTTTTTTTGTTTTTTTT TTGTTTTTTTTATTGGCAGCTGCAATTCTTTTTTTTTTTTTTTTTTAAATCCCACTTTAA AAACAATAAATGCAGGCCAAATCCAGTGTGAGGATAGCTAGGGACTCAGCACAGAAAGCT GACGGGACCCGAAACAGTACCGTAGAGCTGGGCACAGAAAGCAGAGGGAGCCGCCAGGGA CGGCATGACAGACAGCCTGCAGGGTGCTCCGGCAGGGCTCTCCACACAGGCCAAGAGCAT TTCCAGAAGTTGCCAACACTGTCAACCAGGCAGATAAGGCCAAGGAGTCCCCATGGTATT TCAAAACAAGGTGACATTTGCCAGATCAGTTTAGCAGAGAGCTGGGCCACTGCCAGGATT AAAGAGTGAACAGGTGCATGTGTGAAGAGCGTGCAGACAGCCCTTGAGAGGCATGCTGGG GGCGGGGCGGGGGGGGGCACAGTCAGCTAAGCACAGATATGGCTAGGGAGTAGGGAGGGG GCATGCCGGAGCGCGGCTTGAAGATGGGAAGTTCGAGGGTCCAAGATAGGGGCAAGGAAA ATCACTGAGGGCTGTGGGAGGAGAGAGATACCACACGCCTGTCTGGATCCCAGGGCGTCT AGAGAGCAAGTGCTCGGAGCTAGCTATCCTACCACCTGTTAGGAGGGATGGTTCAAGCCA GGCATGGTGGCTGATGCCTCTAATCCCAACACTCTGGGAGGCTGAGGCAGGAGGAAGGTG GGAGTTTCATGGCAGACTGCTATAAGCGCTAGGCAAGCCAGAGCTGCACATTAAGACCTG CTTTAAAAAAAAGAAAAGAAAAGAAAAAAGAAAAAAAGAAAAAAGAAAGAAAGAAACAGG AACCTTAGACTCAGAGAAGCAAAGGTGACCTGTCCAGAGCCACCCAGCTGGAATGACCAG AAACCGCTAAGTATGGACGAAAGGATCAGGCACTTCCAAC..........

Sequence Detail Report

Gene Symbol (Gene ID)	Pdlim7 (ENSMUSG00000021493)
Transcript ID	ENSMUST00000155098

		SNP Information
Strain :
Sequence Retrieve :
Exon translate : CDS Start ( 1 ) - End ( 458 ) -
Strand :	forward reverse
Show sequence :	nucleotide amino acid
Color information