MoG+ -Mouse Genome database with high added value-

Target CDS Information

Gene Symbol (Gene ID)

Zfp346 (ENSMUSG00000021481)

Cross Reference

EMBL	AC123709, AC154610
GO	GO:0003725, GO:0005515, GO:0005634, ...show all
goslim_goa	GO:0003674, GO:0003723, GO:0005575, ...show all
MGI_trans_name	Zfp346-002
OTTP	OTTMUSP00000048654
OTTT	OTTMUST00000089117
UCSC	uc007qpy.1
UniParc	UPI0001DD3535
Uniprot/SPTREMBL	E9PYN2
Vega_transcript	OTTMUST00000089117, Zfp346-002

Vega_translation

214562, OTTMUSP00000048654

Definition

protein_id:ENSMUSP00000124107
translation:

MECPAPDATDAADPGEAGPYKGSEEPEGREPDGVRFDRERARRLWEAVSGAQPAGREEVE
HMIQKNQCLFTSTQCKVCCAMLISESQKLAHYQSSRSKDKNHCCPICNMTFSSPAVAQSH
YLGKTHAKSLKLKQQSTKGAALQQNREMLDPDKFCSLCHSTFNDPAMAQQHYMGKRHRKQ
ETKLKLMAHYGRLADPAVSDLPAGKGYPCKTCKIVLNSIEQYQAHVSGFKHKNQSPKTLV
TLGSQTPVQTQPTPKDSSTVQD

Chromosome

Length
Position(start - end)

27,049
55,105,344 - 55,132,394

Orient to Chromosome

plus

Link

Location : (13:55105344-55132394)
/

Detail Map

name	Zfp346 (ENSMUSG00000021481)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : Zfp346 note : zinc finger protein 346 [Source:MGI Symbol;Acc:MGI:1349417]

name	Gm17617 (ENSMUSG00000091768)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : Gm17617 note : predicted gene, 17617 [Source:MGI Symbol;Acc:MGI:4937251]

name	Zfp346 (ENSMUSG00000021481)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000161018

name	Zfp346 (ENSMUSG00000021481)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000161315

name	Zfp346 (ENSMUSG00000021481)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000021937

name	Zfp346 (ENSMUSG00000021481)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000159278

name	Zfp346 (ENSMUSG00000021481)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000161551

name	Zfp346 (ENSMUSG00000021481)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000159147

name	Zfp346 (ENSMUSG00000021481)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000162476

name	Zfp346 (ENSMUSG00000021481)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000160660

name	Zfp346 (ENSMUSG00000021481)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000162428

name	Zfp346 (ENSMUSG00000021481)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000161077

name	Gm17617 (ENSMUSG00000091768)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000164344

name	Zfp346 (ENSMUSG00000021481) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000089121 Vega_transcript:Zfp346-006 Uniprot/SPTREMBL:E0CXP1 EMBL:AC123709 EMBL:AC154610 GO:GO:0003725 GO:GO:0005515 GO:GO:0005634 GO:GO:0005654 GO:GO:0005730 GO:GO:0008270 GO:GO:0019899 GO:GO:0043065 GO:GO:0044822 MGI_trans_name:Zfp346-006 Vega_translation:214557 Vega_translation:OTTMUSP00000048657 goslim_goa:GO:0003674 goslim_goa:GO:0003723 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0005730 goslim_goa:GO:0008150 goslim_goa:GO:0019899 goslim_goa:GO:0043167 goslim_goa:GO:0043226 OTTP:OTTMUSP00000048657 OTTT:OTTMUST00000089121 UniParc:UPI0001DD3532
definition	note : transcript_id=ENSMUST00000161018 protein_id : ENSMUSP00000125154 translation : MECPAPDATDAADPGEAGPYKGSEEPEGREPDGVRFDRERARRLWEAVSGAQPAGREEVEHMIQKNQCLFTSTQCKVCCAMLISESQKLAHYQSKKHANKVKRYLAIHGMETIKGDVKRLDSDQLCRNTLQILSLWPPP

name	Zfp346 (ENSMUSG00000021481) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000089122 Vega_transcript:Zfp346-007 Uniprot/SPTREMBL:E0CY94 UCSC:uc007qpy.1 EMBL:AC123709 EMBL:AC154610 GO:GO:0003725 GO:GO:0005515 GO:GO:0005634 GO:GO:0005654 GO:GO:0005730 GO:GO:0008270 GO:GO:0019899 GO:GO:0043065 GO:GO:0044822 MGI_trans_name:Zfp346-007 Vega_translation:214558 Vega_translation:OTTMUSP00000048658 goslim_goa:GO:0003674 goslim_goa:GO:0003723 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0005730 goslim_goa:GO:0008150 goslim_goa:GO:0019899 goslim_goa:GO:0043167 goslim_goa:GO:0043226 OTTP:OTTMUSP00000048658 OTTT:OTTMUST00000089122 UniParc:UPI0001DD3533
definition	note : transcript_id=ENSMUST00000161315 protein_id : ENSMUSP00000124397 translation : MECPAPDATDAADPGEAGPYKGSEEPEGREPDGVRFDRERARRLWEAVSGAQPAGREEVEHMIQKNQCLFTSTQCKVCCAMLISESQKLAHYQSKKHANKVKRYLAIHGMETIKGDVKRLDSDQVTQNIGDTREPDASANTTHSKGLKHSA

name	Zfp346 (ENSMUSG00000021481) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS26539.1 Uniprot/SWISSPROT:Q9R0B7 RefSeq_peptide:NP_036147 RefSeq_mRNA:NM_012017.2 Vega_transcript:OTTMUST00000089114 Vega_transcript:Zfp346-001 UCSC:uc007qpy.1 EMBL:AF083339 EMBL:BC055075 GO:GO:0003725 GO:GO:0003725 GO:GO:0005515 GO:GO:0005515 GO:GO:0005634 GO:GO:0005634 GO:GO:0005654 GO:GO:0005654 GO:GO:0005730 GO:GO:0005730 GO:GO:0005737 GO:GO:0008270 GO:GO:0019899 GO:GO:0019899 GO:GO:0043065 GO:GO:0044822 GO:GO:0044822 MGI_trans_name:Zfp346-001 Vega_translation:214559 Vega_translation:OTTMUSP00000048651 goslim_goa:GO:0003674 goslim_goa:GO:0003723 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0005730 goslim_goa:GO:0005737 goslim_goa:GO:0008150 goslim_goa:GO:0019899 goslim_goa:GO:0043167 goslim_goa:GO:0043226 protein_id:AAD52017.1 protein_id:AAH55075.1 OTTP:OTTMUSP00000048651 OTTT:OTTMUST00000089114 UniParc:UPI0000021C0C
definition	note : transcript_id=ENSMUST00000021937 protein_id : ENSMUSP00000021937 translation : MECPAPDATDAADPGEAGPYKGSEEPEGREPDGVRFDRERARRLWEAVSGAQPAGREEVEHMIQKNQCLFTSTQCKVCCAMLISESQKLAHYQSKKHANKVKRYLAIHGMETIKGDVKRLDSDQKSSRSKDKNHCCPICNMTFSSPAVAQSHYLGKTHAKSLKLKQQSTKGAALQQNREMLDPDKFCSLCHSTFNDPAMAQQHYMGKRHRKQETKLKLMAHYGRLADPAVSDLPAGKGYPCKTCKIVLNSIEQYQAHVSGFKHKNQSPKTLVTLGSQTPVQTQPTPKDSSTVQD

name	Zfp346 (ENSMUSG00000021481) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	RefSeq_peptide_predicted:XP_006517322.1 Vega_transcript:OTTMUST00000089119 Vega_transcript:Zfp346-004 Uniprot/SPTREMBL:E9Q7N8 UCSC:uc007qpy.1 EMBL:AC123709 EMBL:AC154610 GO:GO:0003725 GO:GO:0005515 GO:GO:0005634 GO:GO:0005654 GO:GO:0005730 GO:GO:0008270 GO:GO:0019899 GO:GO:0043065 GO:GO:0044822 MGI_trans_name:Zfp346-004 Vega_translation:214560 Vega_translation:OTTMUSP00000048656 goslim_goa:GO:0003674 goslim_goa:GO:0003723 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0005730 goslim_goa:GO:0008150 goslim_goa:GO:0019899 goslim_goa:GO:0043167 goslim_goa:GO:0043226 OTTP:OTTMUSP00000048656 OTTT:OTTMUST00000089119 UniParc:UPI0001DD3534
definition	note : transcript_id=ENSMUST00000159278 protein_id : ENSMUSP00000125078 translation : MECPAPDATDAADPGEAGPYKGSEEPEGREPDGVRFDRERARRLWEAVSGAQPAGREEVEHMIQKNQCLFTSTQCKVCCAMLISESQKLAHYQSKKHANKVKRYLAIHGMETIKGDVKRLDSDQKSSRSKDKNHCCPICNMTFSSPAVAQSHYLGKTHAKSLKLKQQSTKGAALSKHLTNPFLVASTLALQQNREMLDPDKFCSLCHSTFNDPAMAQQHYMGKRHRKQETKLKLMAHYGRLADPAVSDLPGKGYPCKTCKIVLNSIEQYQAHVSGFKHKNQSPKTLVTLGSQTPVQTQPTPKDSSTVQD

name	Zfp346 (ENSMUSG00000021481) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000089128 Vega_transcript:Zfp346-013 Uniprot/SPTREMBL:E0CYH6 EMBL:AC123709 EMBL:AC154610 GO:GO:0003725 GO:GO:0005515 GO:GO:0005634 GO:GO:0005654 GO:GO:0005730 GO:GO:0019899 GO:GO:0043065 GO:GO:0044822 MGI_trans_name:Zfp346-013 Vega_translation:214561 Vega_translation:OTTMUSP00000048662 goslim_goa:GO:0003674 goslim_goa:GO:0003723 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0005730 goslim_goa:GO:0008150 goslim_goa:GO:0019899 goslim_goa:GO:0043226 OTTP:OTTMUSP00000048662 OTTT:OTTMUST00000089128 UniParc:UPI0001DD3536
definition	note : transcript_id=ENSMUST00000161551 protein_id : ENSMUSP00000124180 translation : MECPAPDATDAADPGEAGPYKGSEEPEGREPDGVRFDRERARRLWEAVSGAQPAGREEVEHMIQKNQCLFTSTQCKVCCAMLISESQKLAHYQPCSRIERC

name	Zfp346 (ENSMUSG00000021481) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000089117 Vega_transcript:Zfp346-002 Uniprot/SPTREMBL:E9PYN2 UCSC:uc007qpy.1 EMBL:AC123709 EMBL:AC154610 GO:GO:0003725 GO:GO:0005515 GO:GO:0005634 GO:GO:0005654 GO:GO:0005730 GO:GO:0008270 GO:GO:0019899 GO:GO:0043065 GO:GO:0044822 MGI_trans_name:Zfp346-002 Vega_translation:214562 Vega_translation:OTTMUSP00000048654 goslim_goa:GO:0003674 goslim_goa:GO:0003723 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0005730 goslim_goa:GO:0008150 goslim_goa:GO:0019899 goslim_goa:GO:0043167 goslim_goa:GO:0043226 OTTP:OTTMUSP00000048654 OTTT:OTTMUST00000089117 UniParc:UPI0001DD3535
definition	note : transcript_id=ENSMUST00000159147 protein_id : ENSMUSP00000124107 translation : MECPAPDATDAADPGEAGPYKGSEEPEGREPDGVRFDRERARRLWEAVSGAQPAGREEVEHMIQKNQCLFTSTQCKVCCAMLISESQKLAHYQSSRSKDKNHCCPICNMTFSSPAVAQSHYLGKTHAKSLKLKQQSTKGAALQQNREMLDPDKFCSLCHSTFNDPAMAQQHYMGKRHRKQETKLKLMAHYGRLADPAVSDLPAGKGYPCKTCKIVLNSIEQYQAHVSGFKHKNQSPKTLVTLGSQTPVQTQPTPKDSSTVQD

name	Zfp346 (ENSMUSG00000021481) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000089118 Vega_transcript:Zfp346-003 Uniprot/SPTREMBL:E0CZ32 UCSC:uc007qpy.1 EMBL:AC123709 EMBL:AC154610 EMBL:CH466546 GO:GO:0003725 GO:GO:0005515 GO:GO:0005634 GO:GO:0005654 GO:GO:0005730 GO:GO:0008270 GO:GO:0019899 GO:GO:0043065 GO:GO:0044822 MGI_trans_name:Zfp346-003 Vega_translation:214563 Vega_translation:OTTMUSP00000048655 goslim_goa:GO:0003674 goslim_goa:GO:0003723 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0005730 goslim_goa:GO:0008150 goslim_goa:GO:0019899 goslim_goa:GO:0043167 goslim_goa:GO:0043226 protein_id:EDL41173.1 OTTP:OTTMUSP00000048655 OTTT:OTTMUST00000089118 UniParc:UPI000154A554
definition	note : transcript_id=ENSMUST00000162476 protein_id : ENSMUSP00000125743 translation : MECPAPDATDAADPGEAGPYKGSEEPEGREPDGVRFDRERARRLWEAVSGAQPAGREEVEHMIQKNQCLFTSTQCKVCCAMLISESQKLAHYQSKKHANKVKRYLAIHGMETIKGDVKRLDSDQPCSRIERC

name	Zfp346 (ENSMUSG00000021481) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000089123 Vega_transcript:Zfp346-008 Uniprot/SPTREMBL:E0CYN4 UCSC:uc007qpy.1 EMBL:AC123709 EMBL:AC154610 EMBL:CH466546 GO:GO:0003725 GO:GO:0005515 GO:GO:0005634 GO:GO:0005654 GO:GO:0005730 GO:GO:0008270 GO:GO:0019899 GO:GO:0043065 GO:GO:0044822 MGI_trans_name:Zfp346-008 Vega_translation:214564 Vega_translation:OTTMUSP00000048659 goslim_goa:GO:0003674 goslim_goa:GO:0003723 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0005730 goslim_goa:GO:0008150 goslim_goa:GO:0019899 goslim_goa:GO:0043167 goslim_goa:GO:0043226 protein_id:EDL41172.1 OTTP:OTTMUSP00000048659 OTTT:OTTMUST00000089123 UniParc:UPI000154A553
definition	note : transcript_id=ENSMUST00000160660 protein_id : ENSMUSP00000124034 translation : MECPAPDATDAADPGEAGPYKGSEEPEGREPDGVRFDRERARRLWEAVSGAQPAGREEVEHMIQKNQCLFTSTQCKVCCAMLISESQKLAHYQSKKHANKVKRYLAIHGMETIKGDVKRLDSDQLGRATPARRVK

name	Zfp346 (ENSMUSG00000021481) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000089127 Vega_transcript:Zfp346-012 Uniprot/SPTREMBL:E0CZ32 UCSC:uc007qpy.1 EMBL:AC123709 EMBL:AC154610 EMBL:CH466546 GO:GO:0003725 GO:GO:0005515 GO:GO:0005634 GO:GO:0005654 GO:GO:0005730 GO:GO:0008270 GO:GO:0019899 GO:GO:0043065 GO:GO:0044822 MGI_trans_name:Zfp346-012 Vega_translation:214565 Vega_translation:OTTMUSP00000048661 goslim_goa:GO:0003674 goslim_goa:GO:0003723 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0005730 goslim_goa:GO:0008150 goslim_goa:GO:0019899 goslim_goa:GO:0043167 goslim_goa:GO:0043226 protein_id:EDL41173.1 OTTP:OTTMUSP00000048661 OTTT:OTTMUST00000089127 UniParc:UPI000154A554
definition	note : transcript_id=ENSMUST00000162428 protein_id : ENSMUSP00000125389 translation : MECPAPDATDAADPGEAGPYKGSEEPEGREPDGVRFDRERARRLWEAVSGAQPAGREEVEHMIQKNQCLFTSTQCKVCCAMLISESQKLAHYQSKKHANKVKRYLAIHGMETIKGDVKRLDSDQPCSRIERC

name	Zfp346 (ENSMUSG00000021481) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000089124 Vega_transcript:Zfp346-009 Uniprot/SPTREMBL:F7CTY2 UCSC:uc007qpy.1 GO:GO:0003725 GO:GO:0005515 GO:GO:0005634 GO:GO:0005654 GO:GO:0005730 GO:GO:0008270 GO:GO:0019899 GO:GO:0043065 GO:GO:0044822 MGI_trans_name:Zfp346-009 Vega_translation:214566 Vega_translation:OTTMUSP00000048660 goslim_goa:GO:0003674 goslim_goa:GO:0003723 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0005730 goslim_goa:GO:0008150 goslim_goa:GO:0019899 goslim_goa:GO:0043167 goslim_goa:GO:0043226 OTTP:OTTMUSP00000048660 OTTT:OTTMUST00000089124 UniParc:UPI0001DD3537
definition	codon_start : 3 note : transcript_id=ENSMUST00000161077 protein_id : ENSMUSP00000125204 translation : XYKGSEEPEGREPDGVRFDRERARRLWEAVSGAQPAGREEVEHMIQKNQCLFTSTQCKVCCAMLISESQKLAHYQSKKHANKVKRYLAIHGMETIKGDVKRLDSDQKSSRSKDKNHCCPICNMTFSSPAVAQSHYLGKTHAKSLKLKQQSTKGAALSKHLTNPFLVASTLALQQNREMLDPDKFCSLCHSTFNDPAMAQQHYMGKRHRKQETKLKLMAHYGRLADPAVSDLPGHPKHW

name	Gm17617 (ENSMUSG00000091768) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Uniprot/SPTREMBL:F6TMR5 MGI_trans_name:Gm17617-201 UniParc:UPI0001F78F1A
definition	note : transcript_id=ENSMUST00000164344 protein_id : ENSMUSP00000127490 translation : LRTLGAKTPVGTQ

name
type	misc_feature
link
xref
definition	note : contig AC154610.3 1..163811(-1)

name
type	misc_feature
link
xref
definition	note : contig AC123709.9 27600..99670(1)

name	Zfp346 (ENSMUSG00000021481)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000089120 Vega_transcript:OTTMUST00000089120 MGI_trans_name:Zfp346-005 OTTT:OTTMUST00000089120
definition	note : retained_intron note : transcript_id=ENSMUST00000162288

name	Zfp346 (ENSMUSG00000021481)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000089125 Vega_transcript:OTTMUST00000089125 MGI_trans_name:Zfp346-010 OTTT:OTTMUST00000089125
definition	note : retained_intron note : transcript_id=ENSMUST00000160310

name	Zfp346 (ENSMUSG00000021481)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000089126 Vega_transcript:OTTMUST00000089126 MGI_trans_name:Zfp346-011 OTTT:OTTMUST00000089126
definition	note : retained_intron note : transcript_id=ENSMUST00000162653

Polymorphisms Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Zfp346 (ENSMUSG00000021481)
Transcript ID	ENSMUST00000159147

Reports
substitution
cSNPs	0
Insertion	30
Deletion	21
SNPs	-1kb 55100363(c.-4981T>C), 55100381(c.-4963G>C), 55100468(c.-4876G>A), 55100489(c.-4855A>C), 55100544(c.-4800A>G), 55100675(c.-4669T>G), 55100676(c.-4668T>A), 55100979(c.-4365G>A), 55100998(c.-4346A>G), 55101640(c.-3704A>G), 55101731(c.-3613T>C), 55101733(c.-3611C>T), 55101803(c.-3541C>T), 55101866(c.-3478G>A), 55101934(c.-3410A>G), 55101936(c.-3408T>C), 55101993(c.-3351G>T), 55102008(c.-3336G>A), 55102494(c.-2850A>G), 55102629(c.-2715G>T), 55102961(c.-2383T>C), 55102963(c.-2381C>A), 55103401(c.-1943A>G), 55103626(c.-1718T>C), 55104001(c.-1343A>G), 55104295(c.-1049C>A), 55104370(c.-974T>C), 55104372(c.-972C>A), 55104943(c.-401T>G), 55105113(c.-231A>C), 5'UTR CDS 3'UTR 55132452(c.58C>G), INTRON 55105714(c.175+196C>A), 55106166(c.175+648G>A), 55106378(c.175+860G>A), 55106611(c.175+1093A>C), 55106778(c.175+1260T>C), 55106812(c.175+1294C>T), 55107018(c.175+1500A>G), 55107640(c.175+2122C>T), 55107860(c.175+2342A>G), 55107881(c.175+2363T>C), 55108139(c.175+2621A>G), 55108785(c.175+3267T>C), 55108851(c.175+3333T>G), 55109083(c.175+3565G>T), 55109220(c.175+3702G>T), 55109353(c.176-3683C>A), 55109522(c.176-3514C>T), 55109825(c.176-3211A>T), 55111032(c.176-2004G>A), 55111065(c.176-1971G>A), 55111472(c.176-1564A>G), 55111560(c.176-1476G>A), 55111760(c.176-1276A>G), 55111940(c.176-1096C>T), 55112046(c.176-990T>C), 55113206(c.279+67G>A), 55113409(c.279+270C>T), 55113420(c.279+281G>T), 55113467(c.279+328C>A), 55113492(c.279+353T>C), 55114155(c.279+1016T>C), 55114215(c.279+1076G>A), 55114275(c.279+1136A>G), 55114408(c.280-1075A>G), 55114496(c.280-987A>G), 55114504(c.280-979G>A), 55114734(c.280-749A>G), 55115241(c.280-242C>T), 55115373(c.280-110G>A), 55115379(c.280-104G>A), 55115666(c.421+42T>C), 55116401(c.421+777C>T), 55116437(c.421+813C>T), 55116461(c.421+837T>C), 55116747(c.421+1123G>T), 55117235(c.421+1611A>G), 55117242(c.421+1618C>T), 55118119(c.421+2495T>G), 55118140(c.421+2516T>C), 55118233(c.421+2609A>G), 55118425(c.421+2801A>C), 55118478(c.421+2854A>G), 55118496(c.421+2872T>C), 55118549(c.421+2925G>A), 55118958(c.421+3334A>G), 55118965(c.421+3341A>G), 55118978(c.422-3352T>A), 55119194(c.422-3136A>G), 55119829(c.422-2501C>T), 55119847(c.422-2483A>G), 55120061(c.422-2269G>T), 55121939(c.422-391T>C), 55122156(c.422-174T>C), 55122956(c.607+441C>T), 55123207(c.607+692A>G), 55123614(c.607+1099A>G), 55123758(c.607+1243C>T), 55123760(c.607+1245A>G), 55123775(c.607+1260C>T), 55124003(c.607+1488A>G), 55124318(c.607+1803C>T), 55124655(c.607+2140T>C), 55125223(c.607+2708T>C), 55125425(c.607+2910G>T), 55126365(c.607+3850A>C), 55126521(c.607+4006G>A), 55126615(c.608-3919T>C), 55126847(c.608-3687G>A), 55127875(c.608-2659G>A), 55128445(c.608-2089C>T), 55128878(c.608-1656A>G), 55128888(c.608-1646C>T), 55129374(c.608-1160A>G), 55129413(c.608-1121A>G), 55129748(c.608-786C>G), 55129795(c.608-739C>T), 55131617(c.702-690A>T), 55131629(c.702-678G>A), 55132172(c.702-135C>T), +1kb 55134137(c.1743A>G), 55134426(c.2032A>G), 55134435(c.2041T>C), 55134702(c.2308A>C), 55134963(c.2569C>T), 55135158(c.2764T>C), 55135356(c.2962C>G), 55135357(c.2963A>G), 55135667(c.3273T>G), 55135737(c.3343C>T), 55136267(c.3873A>G), 55136326(c.3932A>T), 55136343(c.3949C>T), 55136400(c.4006A>G), 55136485(c.4091T>C), 55136563(c.4169A>T), 55136870(c.4476C>T), 55136876(c.4482G>C), 55136918(c.4524A>G), 55137147(c.4753A>G), 55137197(c.4803A>G), 55137340(c.4946A>G), 55137487(c.5093C>T), 55137696(c.*5302C>T),
Insertions	-1kb 55100610 (c.-4734_-4733insCACAAACTT), 55101689 (c.-3655_-3654insCCCCA), 55102233 (c.-3111_-3110insCT), 55102881 (c.-2463_-2462insTTTA), 5'UTR CDS 3'UTR INTRON 55105723 (c.175+211dupC), 55108607 (c.175+3101dupT), 55110432 (c.176-2601_176-2600insTCTAA), 55117099 (c.421+1477_421+1479dupACA), 55119135 (c.422-3196_422-3195dupAC), 55119371 (c.422-2960_422-2959dupAA), 55120032 (c.422-2291_422-2287dupGTTTT), 55120911 (c.422-1416dupT), 55120914 (c.422-1416dupT), 55120926 (c.422-1402dupT), 55120929 (c.422-1401_422-1400insT), 55120936 (c.422-1393dupT), 55120939 (c.422-1390dupT), 55123009 (c.607+492_607+494dupAAA), 55123104 (c.607+590_607+591insTT), 55124170 (c.607+1662_607+1663dupAA), 55126635 (c.608-3888_608-3887dupAA), 55127778 (c.608-2756_608-2755insAC), 55128254 (c.608-2272_608-2271dupTT), 55130815 (c.701+188_701+189insTAGT), 55131141 (c.701+515dupG), 55131798 (c.702-509dupA), 55131802 (c.702-505dupA), +1kb 55133900 (c.1506_1507insAG), 55134890 (c.2496_2497insT), 55135617 (c.3223_3224insT),
Deletions	-1kb 55100752 (c.-4591_-4583delAAACTAAAA), 55100841 (c.-4502_-4500delAAA), 55101641 (c.-3702delA), 55101849 (c.-3494delT), 5'UTR CDS 3'UTR INTRON 55106587 (c.175+1083_175+1084delTT), 55111217 (c.176-1818_176-1813delAGGAGA), 55112340 (c.176-685_176-684delAA), 55114534 (c.280-947_280-946delTA), 55116863 (c.421+1242delC), 55118825 (c.421+3203delA), 55119139 (c.422-3180_422-3178delATA), 55119149 (c.422-3180_422-3178delATA), 55120839 (c.422-1490_422-1485delAGAAGA), 55127611 (c.608-2922delT), 55127626 (c.608-2907_608-2902delCATATA), 55127799 (c.608-2734_608-2731delCTCT), 55129287 (c.608-1244_608-1243delCT), 55130031 (c.608-491_608-488delGAGA), 55131701 (c.702-595_702-592delGCGC), 55131711 (c.702-595_702-592delGCGC), 55131850 (c.702-456_702-455delCT), +1kb
coding sequence substitutions
premature termination by the nucleotide substitution	0
synonymous num	0
non-synonymous num	0
synonymous substitutions
non-synonymous substitutions
B6 transcript (ENSMUST00000159147)	MECPAPDATDAADPGEAGPYKGSEEPEGREPDGVRFDRERARRLWEAVSGAQPAGREEVE HMIQKNQCLFTSTQCKVCCAMLISESQKLAHYQSSRSKDKNHCCPICNMTFSSPAVAQSH YLGKTHAKSLKLKQQSTKGAALQQNREMLDPDKFCSLCHSTFNDPAMAQQHYMGKRHRKQ ETKLKLMAHYGRLADPAVSDLPAGKGYPCKTCKIVLNSIEQYQAHVSGFKHKNQSPKTLV TLGSQTPVQTQPTPKDSSTVQD*
MSMv4 transcript	MECPAPDATDAADPGEAGPYKGSEEPEGREPDGVRFDRERARRLWEAVSGAQPAGREEVE HMIQKNQCLFTSTQCKVCCAMLISESQKLAHYQSSRSKDKNHCCPICNMTFSSPAVAQSH YLGKTHAKSLKLKQQSTKGAALQQNREMLDPDKFCSLCHSTFNDPAMAQQHYMGKRHRKQ ETKLKLMAHYGRLADPAVSDLPAGKGYPCKTCKIVLNSIEQYQAHVSGFKHKNQSPKTLV TLGSQTPVQTQPTPKDSSTVQD*
homology	100.00 (263 / 263)

Exon Detail Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Zfp346 (ENSMUSG00000021481)
Transcript ID	ENSMUST00000159147


..........GCTCCCAACACTAGCCTCAAATACATCATGACAATCCCCATGCCTCAGCC
TCCAGAGTGATATAATTACAGGCAGGCACCACATCCAACCTTATTATTGTCTGGGTTTTT
GTTTGTTTTGTGGGTGTGTTTTGTTTCGTTGAGAGATGATCTATTATTGGAGCAGAGGTT
TGTCTTGAACTCCTGGTCGTCTTGCGTCCTCCAGAGTACTTTGACCACAGCCTTAACTAT
CTTTTTCTCGAACAATGTCTTTTTTTTCTCAAATGTGCATTTCTCTAACCTTAGTCTCCC
AAATTTTGGAATAGCAAGTATGAGCCACCGTGCTCAGCCATTAGTAAGTGCTTCTTAGAC
AGGGTCTCAGGTAGCCCAGGCTGGCCTCAAGCTCCTAATCTTATATCCTCCACCTCCTGT
GTATTGAGATGAAGAGCTGTACCATTATGTCTGCTTTAATAAGCTAAGTAAAACATTTCT
AGAATCTGGGTCTTAGGTTCTCTTCCAAAGAAATGGGAGAAATTGCCGGGCATGGTGGTG
CATGCCTTTGATCCCAGCACTCGGGAGGCAGAGGCAGGAGGATTTCTGAGTTCGAGGCCA
GCCTGGTCTTCAGAGTGAGTGCCAGGACAGCCAGGGCTACACAGAGAAACCCTGTCTCGA
AAAACCAAAAAGAAAAAAGAAAAGAAATGGGAGATAATTTTCCACATATAGAAAAAGGAA
ATGACAAGTGTCCGTCAGTGGCTCACCTTGAGCAAAACTGAGAGCCCTGAGCTAAGAAGT
GATCAACATGCACCGTTTTTTTCCAATTCACTGGACTCCTAAGGCGCCAGAGGAACCAAA
ACAAAATGAGCCTCTGGGCCCCGCCTCCTCTGGGCCCCGCCCCCTCAGGGCCCCGCCCCA
GCGGGACTCTGCAGAGCCCAAACTTCGCGAGAGTTGCTGGCCGGGTCAAATCCCCGCCCA
CCCACTGCTCGTGGTAGCAGGCCGCATGCGCAGCTTCTTAACGGCGCGTC
TTGCCGGAAAGATGGAGTGTCCTGCGCCCGATGCTACGGATGCTGCGGACCCTGGAGAAGCCGGACCGTACAAGGGCTCCGAGGAGCCGGAGGGTCGGGAACCGGACGGAGTGCGCTTTGACCGCGAGAGGGCGCGTCGCCTGTGGGAAGCTGTGTCCGGTGCGCAGCCGGCGGGGAGGGAGGAAG
GTGAGTCGGGGGCTCCGGGGTTGGC..........TACATGATTTCTTTTCCCTCTGTAG
TGGAACACATGATCCAGAAGAACCAGTGTCTCTTCACCAGCACCCAGTGTAAGGTCTGCTGTGCCATGCTGATTTCTGAGTCTCAGAAGCTGGCGCATTACCAG
GTAGGCAATTTCTACTGTCTTCGTG..........CTGTGTTCTCTCTCCCAACCAGAAG
AGCAGCAGAAGCAAAGACAAGAACCACTGCTGCCCCATCTGTAACATGACCTTTTCCTCCCCTGCTGTGGCACAGTCGCACTACCTGGGGAAGACCCACGCAAAGAGCCTAAAGCTGAAGCAGCAGTCCACTAAGGGGGCAG
GTACTGCGCTTCCTGAGTAGTGCTT..........CCTTTCCTTGTGGCCTCCACCTTAG
CCTTGCAGCAGAATAGAGAGATGCTAGACCCAGACAAATTCTGCAGCCTCTGCCATTCAACATTCAACGACCCTGCCATGGCTCAGCAACATTATATGGGCAAGAGACACAGGAAGCAGGAGACTAAGCTCAAACTCATGGCACACTATGGGCGGCTGGCGGACCCTGCTGTCTCTGACTTACCAG
GTGAGAAGGCCCCACTCATGTGCAG..........CTCTTCATTTTGATGTGTGTTTCAG
CTGGGAAGGGCTACCCCTGCAAGACGTGTAAAATAGTGCTGAACTCCATAGAGCAGTACCAAGCTCACGTCAGTGGCTTCAAACACAAAAACCA
GTGAGTAAAGTCCTTCGGAAGTTCA..........CTGTGTCTGTGTTTTCAAATTACAG
GTCACCCAAAACATTGGTGACACTCGGGAGCCAGACGCCAGTGCAAACACAACCCACTCCAAAGGACTCAAGCACAGTGCAAGACTAAAGCTGTCCCTGCCTGGTCAGCCTGGTGGGACAGCCATAAGCCAGTTCCTGGTGACTGGTTAGCCGTGGCTCCTTCCTCCTCCTCTCTTATATCCGAAGAATGTGGAGGCATGAGGCCAACTTGGGCTGCAGATCTGCAGATAGCCTGACTGCGCCCAGATGCAGCTCCTCCTGCCCCTCTTGAGCATGGCCCTATAGGCCATGGCAGGAGACAGGGCTCTGAGAAGACCTGAGGTGAAGGTTTAGAGGTTGGCCTTCCCCACCCCTCTGGGTGTATGTCCTACAGTCCCGATGTCTGTTTTTACTCTCAAGGTCAGTTGGGAGCAAGGTCCTGCAGAGAAGGGAGA
GCACTGTCTCTGGGCTCCAGGCAGCTTTGTGTAGAAATGTGGAGCTAATGTGTCATTTCC
TATCCCTCAAGTGTGCAGGCTTGCTAGGTATAGATCCTGCCAACCATGAAGTCTCCCAGA
AAACAGAGTCTCCGGCAGAGCACTGCCATCTCCGCTGCCTGCTGTCTCTCCAGTTCCCTC
GTGGTGCTAGGCAGCTGCAGCAGCTCGGCGTCAGAGGAGACTTGAGTGCCCACTGGGGTC
CTGATAGGCACCTAAGGGGGTGCACCAACCCAGGGCCATGTGAGAAAGTCTCCTACCTGC
TATGTTCCTTGATTCTGTGCCCTTGTAGGTAACTGCCTCCTGCCAGCCTACTAAAAGGTC
ACTTGGTGTTAGCTCTATGCCCTTGTGTAGTGGGCGATCCTACCCAGTTGCTGTGGTGCT
ATCCCTCCCTTGACCTCCTCAAGAAGATTCTGGGGGAACTAAAAAGGAATTTAGAACTGG
TGCAGGTTCTACAGAGAGCAATAGGGTCCCCAGACCCTAACCTGAGAAATTCCTTCTGGG
TTTGTGTCCTGGGATCCACTGCAGTGGGTTTATACATAACTGTGGATGGAGCAGGTCTTC
CAGGAAGTATTCCTAAAGCTTGTAGAGATAAAACAGCTTCCTTGTTAGTGTCATTGGGTA
CCAAGTAGAGATGGGGCAGGGCTTAAACTCTTGTTCTTTGGTCACTCAACCAAGAAAAAA
AATTTCTTCTGTGAGTCATGCTGTAACCCCAGGGCTGAGGTTGATACTGCTATGACATCC
CCACACAGTTGGCCCCCAGTGTCCTTAATAACAATCTTACCCAGGAAAGGTCTCCCTGCT
GCCCTAAGCCCAACCCAGTTCATCCCCCAGCTAAGGGATTGATTCTTGAGATAGTCACTC
TGGCTACTGAGTGGGGGACTGCGAAGAGGCCAGTGTGAAAACTGTGTCCATACTGCTGCT
GGTCTCCAGGGCACTCCCTTCAGGGTAGATGTCCAGGATG..........

No.	Exon / Intron	Start	End	Start Phase	End Phase	Length	Sequence
	5' upstream sequence						..........GCTCCCAACACTAGCCTCAAATACATCATGACAATCCCCATGCCTCAGCC TCCAGAGTGATATAATTACAGGCAGGCACCACATCCAACCTTATTATTGTCTGGGTTTTT GTTTGTTTTGTGGGTGTGTTTTGTTTCGTTGAGAGATGATCTATTATTGGAGCAGAGGTT TGTCTTGAACTCCTGGTCGTCTTGCGTCCTCCAGAGTACTTTGACCACAGCCTTAACTAT CTTTTTCTCGAACAATGTCTTTTTTTTCTCAAATGTGCATTTCTCTAACCTTAGTCTCCC AAATTTTGGAATAGCAAGTATGAGCCACCGTGCTCAGCCATTAGTAAGTGCTTCTTAGAC AGGGTCTCAGGTAGCCCAGGCTGGCCTCAAGCTCCTAATCTTATATCCTCCACCTCCTGT GTATTGAGATGAAGAGCTGTACCATTATGTCTGCTTTAATAAGCTAAGTAAAACATTTCT AGAATCTGGGTCTTAGGTTCTCTTCCAAAGAAATGGGAGAAATTGCCGGGCATGGTGGTG CATGCCTTTGATCCCAGCACTCGGGAGGCAGAGGCAGGAGGATTTCTGAGTTCGAGGCCA GCCTGGTCTTCAGAGTGAGTGCCAGGACAGCCAGGGCTACACAGAGAAACCCTGTCTCGA AAAACCAAAAAGAAAAAAGAAAAGAAATGGGAGATAATTTTCCACATATAGAAAAAGGAA ATGACAAGTGTCCGTCAGTGGCTCACCTTGAGCAAAACTGAGAGCCCTGAGCTAAGAAGT GATCAACATGCACCGTTTTTTTCCAATTCACTGGACTCCTAAGGCGCCAGAGGAACCAAA ACAAAATGAGCCTCTGGGCCCCGCCTCCTCTGGGCCCCGCCCCCTCAGGGCCCCGCCCCA GCGGGACTCTGCAGAGCCCAAACTTCGCGAGAGTTGCTGGCCGGGTCAAATCCCCGCCCA CCCACTGCTCGTGGTAGCAGGCCGCATGCGCAGCTTCTTAACGGCGCGTC
1	EXON 1	55,105,333	55,105,518	-	1	186	TTGCCGGAAAGATGGAGTGTCCTGCGCCCGATGCTACGGATGCTGCGGACCCTGGAGAAG CCGGACCGTACAAGGGCTCCGAGGAGCCGGAGGGTCGGGAACCGGACGGAGTGCGCTTTG ACCGCGAGAGGGCGCGTCGCCTGTGGGAAGCTGTGTCCGGTGCGCAGCCGGCGGGGAGGG AGGAAG
	INTRON 1 - 2	55,105,519	55,113,035			7,517	GTGAGTCGGGGGCTCCGGGGTTGGC..........TACATGATTTCTTTTCCCTCTGTAG
2	EXON 2	55,113,036	55,113,139	1	0	104	TGGAACACATGATCCAGAAGAACCAGTGTCTCTTCACCAGCACCCAGTGTAAGGTCTGCT GTGCCATGCTGATTTCTGAGTCTCAGAAGCTGGCGCATTACCAG
	INTRON 2 - 3	55,113,140	55,115,482			2,343	GTAGGCAATTTCTACTGTCTTCGTG..........CTGTGTTCTCTCTCCCAACCAGAAG
3	EXON 3	55,115,483	55,115,624	0	1	142	AGCAGCAGAAGCAAAGACAAGAACCACTGCTGCCCCATCTGTAACATGACCTTTTCCTCC CCTGCTGTGGCACAGTCGCACTACCTGGGGAAGACCCACGCAAAGAGCCTAAAGCTGAAG CAGCAGTCCACTAAGGGGGCAG
	INTRON 3 - 4	55,115,625	55,122,329			6,705	GTACTGCGCTTCCTGAGTAGTGCTT..........CCTTTCCTTGTGGCCTCCACCTTAG
4	EXON 4	55,122,330	55,122,515	1	1	186	CCTTGCAGCAGAATAGAGAGATGCTAGACCCAGACAAATTCTGCAGCCTCTGCCATTCAA CATTCAACGACCCTGCCATGGCTCAGCAACATTATATGGGCAAGAGACACAGGAAGCAGG AGACTAAGCTCAAACTCATGGCACACTATGGGCGGCTGGCGGACCCTGCTGTCTCTGACT TACCAG
	INTRON 4 - 5	55,122,516	55,130,533			8,018	GTGAGAAGGCCCCACTCATGTGCAG..........CTCTTCATTTTGATGTGTGTTTCAG
5	EXON 5	55,130,534	55,130,627	1	2	94	CTGGGAAGGGCTACCCCTGCAAGACGTGTAAAATAGTGCTGAACTCCATAGAGCAGTACC AAGCTCACGTCAGTGGCTTCAAACACAAAAACCA
	INTRON 5 - 6	55,130,628	55,132,306			1,679	GTGAGTAAAGTCCTTCGGAAGTTCA..........CTGTGTCTGTGTTTTCAAATTACAG
6	EXON 6	55,132,307	55,132,740	2	-	434	GTCACCCAAAACATTGGTGACACTCGGGAGCCAGACGCCAGTGCAAACACAACCCACTCC AAAGGACTCAAGCACAGTGCAAGACTAAAGCTGTCCCTGCCTGGTCAGCCTGGTGGGACA GCCATAAGCCAGTTCCTGGTGACTGGTTAGCCGTGGCTCCTTCCTCCTCCTCTCTTATAT CCGAAGAATGTGGAGGCATGAGGCCAACTTGGGCTGCAGATCTGCAGATAGCCTGACTGC GCCCAGATGCAGCTCCTCCTGCCCCTCTTGAGCATGGCCCTATAGGCCATGGCAGGAGAC AGGGCTCTGAGAAGACCTGAGGTGAAGGTTTAGAGGTTGGCCTTCCCCACCCCTCTGGGT GTATGTCCTACAGTCCCGATGTCTGTTTTTACTCTCAAGGTCAGTTGGGAGCAAGGTCCT GCAGAGAAGGGAGA
	3' upstream sequence						GCACTGTCTCTGGGCTCCAGGCAGCTTTGTGTAGAAATGTGGAGCTAATGTGTCATTTCC TATCCCTCAAGTGTGCAGGCTTGCTAGGTATAGATCCTGCCAACCATGAAGTCTCCCAGA AAACAGAGTCTCCGGCAGAGCACTGCCATCTCCGCTGCCTGCTGTCTCTCCAGTTCCCTC GTGGTGCTAGGCAGCTGCAGCAGCTCGGCGTCAGAGGAGACTTGAGTGCCCACTGGGGTC CTGATAGGCACCTAAGGGGGTGCACCAACCCAGGGCCATGTGAGAAAGTCTCCTACCTGC TATGTTCCTTGATTCTGTGCCCTTGTAGGTAACTGCCTCCTGCCAGCCTACTAAAAGGTC ACTTGGTGTTAGCTCTATGCCCTTGTGTAGTGGGCGATCCTACCCAGTTGCTGTGGTGCT ATCCCTCCCTTGACCTCCTCAAGAAGATTCTGGGGGAACTAAAAAGGAATTTAGAACTGG TGCAGGTTCTACAGAGAGCAATAGGGTCCCCAGACCCTAACCTGAGAAATTCCTTCTGGG TTTGTGTCCTGGGATCCACTGCAGTGGGTTTATACATAACTGTGGATGGAGCAGGTCTTC CAGGAAGTATTCCTAAAGCTTGTAGAGATAAAACAGCTTCCTTGTTAGTGTCATTGGGTA CCAAGTAGAGATGGGGCAGGGCTTAAACTCTTGTTCTTTGGTCACTCAACCAAGAAAAAA AATTTCTTCTGTGAGTCATGCTGTAACCCCAGGGCTGAGGTTGATACTGCTATGACATCC CCACACAGTTGGCCCCCAGTGTCCTTAATAACAATCTTACCCAGGAAAGGTCTCCCTGCT GCCCTAAGCCCAACCCAGTTCATCCCCCAGCTAAGGGATTGATTCTTGAGATAGTCACTC TGGCTACTGAGTGGGGGACTGCGAAGAGGCCAGTGTGAAAACTGTGTCCATACTGCTGCT GGTCTCCAGGGCACTCCCTTCAGGGTAGATGTCCAGGATG..........

Sequence Detail Report

Gene Symbol (Gene ID)	Zfp346 (ENSMUSG00000021481)
Transcript ID	ENSMUST00000159147

		SNP Information
Strain :
Sequence Retrieve :
Exon translate : CDS Start ( 1 ) - End ( 263 ) -
Strand :	forward reverse
Show sequence :	nucleotide amino acid
Color information