MoG+ -Mouse Genome database with high added value-

Target CDS Information

Gene Symbol (Gene ID)

Zfp346 (ENSMUSG00000021481)

Cross Reference

GO	GO:0003725, GO:0005515, GO:0005634, ...show all
goslim_goa	GO:0003674, GO:0003723, GO:0005575, ...show all
MGI_trans_name	Zfp346-009
OTTP	OTTMUSP00000048660
OTTT	OTTMUST00000089124
UCSC	uc007qpy.1
UniParc	UPI0001DD3537
Uniprot/SPTREMBL	F7CTY2
Vega_transcript	OTTMUST00000089124, Zfp346-009
Vega_translation	214566, OTTMUSP00000048660

Definition

codon_start:3
protein_id:ENSMUSP00000125204
translation:

XYKGSEEPEGREPDGVRFDRERARRLWEAVSGAQPAGREEVEHMIQKNQCLFTSTQCKVC
CAMLISESQKLAHYQSKKHANKVKRYLAIHGMETIKGDVKRLDSDQKSSRSKDKNHCCPI
CNMTFSSPAVAQSHYLGKTHAKSLKLKQQSTKGAALSKHLTNPFLVASTLALQQNREMLD
PDKFCSLCHSTFNDPAMAQQHYMGKRHRKQETKLKLMAHYGRLADPAVSDLPGHPKHW

Chromosome

Length
Position(start - end)

26,926
55,105,399 - 55,132,326

Orient to Chromosome

plus

Link

Location : (13:55105399-55132326)
/

Detail Map

name	Zfp346 (ENSMUSG00000021481)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : Zfp346 note : zinc finger protein 346 [Source:MGI Symbol;Acc:MGI:1349417]

name	Gm17617 (ENSMUSG00000091768)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : Gm17617 note : predicted gene, 17617 [Source:MGI Symbol;Acc:MGI:4937251]

name	Zfp346 (ENSMUSG00000021481)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000161018

name	Zfp346 (ENSMUSG00000021481)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000161315

name	Zfp346 (ENSMUSG00000021481)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000021937

name	Zfp346 (ENSMUSG00000021481)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000159278

name	Zfp346 (ENSMUSG00000021481)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000161551

name	Zfp346 (ENSMUSG00000021481)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000159147

name	Zfp346 (ENSMUSG00000021481)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000162476

name	Zfp346 (ENSMUSG00000021481)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000160660

name	Zfp346 (ENSMUSG00000021481)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000162428

name	Zfp346 (ENSMUSG00000021481)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000161077

name	Gm17617 (ENSMUSG00000091768)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000164344

name	Zfp346 (ENSMUSG00000021481) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000089121 Vega_transcript:Zfp346-006 Uniprot/SPTREMBL:E0CXP1 EMBL:AC123709 EMBL:AC154610 GO:GO:0003725 GO:GO:0005515 GO:GO:0005634 GO:GO:0005654 GO:GO:0005730 GO:GO:0008270 GO:GO:0019899 GO:GO:0043065 GO:GO:0044822 MGI_trans_name:Zfp346-006 Vega_translation:214557 Vega_translation:OTTMUSP00000048657 goslim_goa:GO:0003674 goslim_goa:GO:0003723 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0005730 goslim_goa:GO:0008150 goslim_goa:GO:0019899 goslim_goa:GO:0043167 goslim_goa:GO:0043226 OTTP:OTTMUSP00000048657 OTTT:OTTMUST00000089121 UniParc:UPI0001DD3532
definition	note : transcript_id=ENSMUST00000161018 protein_id : ENSMUSP00000125154 translation : MECPAPDATDAADPGEAGPYKGSEEPEGREPDGVRFDRERARRLWEAVSGAQPAGREEVEHMIQKNQCLFTSTQCKVCCAMLISESQKLAHYQSKKHANKVKRYLAIHGMETIKGDVKRLDSDQLCRNTLQILSLWPPP

name	Zfp346 (ENSMUSG00000021481) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000089122 Vega_transcript:Zfp346-007 Uniprot/SPTREMBL:E0CY94 UCSC:uc007qpy.1 EMBL:AC123709 EMBL:AC154610 GO:GO:0003725 GO:GO:0005515 GO:GO:0005634 GO:GO:0005654 GO:GO:0005730 GO:GO:0008270 GO:GO:0019899 GO:GO:0043065 GO:GO:0044822 MGI_trans_name:Zfp346-007 Vega_translation:214558 Vega_translation:OTTMUSP00000048658 goslim_goa:GO:0003674 goslim_goa:GO:0003723 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0005730 goslim_goa:GO:0008150 goslim_goa:GO:0019899 goslim_goa:GO:0043167 goslim_goa:GO:0043226 OTTP:OTTMUSP00000048658 OTTT:OTTMUST00000089122 UniParc:UPI0001DD3533
definition	note : transcript_id=ENSMUST00000161315 protein_id : ENSMUSP00000124397 translation : MECPAPDATDAADPGEAGPYKGSEEPEGREPDGVRFDRERARRLWEAVSGAQPAGREEVEHMIQKNQCLFTSTQCKVCCAMLISESQKLAHYQSKKHANKVKRYLAIHGMETIKGDVKRLDSDQVTQNIGDTREPDASANTTHSKGLKHSA

name	Zfp346 (ENSMUSG00000021481) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS26539.1 Uniprot/SWISSPROT:Q9R0B7 RefSeq_peptide:NP_036147 RefSeq_mRNA:NM_012017.2 Vega_transcript:OTTMUST00000089114 Vega_transcript:Zfp346-001 UCSC:uc007qpy.1 EMBL:AF083339 EMBL:BC055075 GO:GO:0003725 GO:GO:0003725 GO:GO:0005515 GO:GO:0005515 GO:GO:0005634 GO:GO:0005634 GO:GO:0005654 GO:GO:0005654 GO:GO:0005730 GO:GO:0005730 GO:GO:0005737 GO:GO:0008270 GO:GO:0019899 GO:GO:0019899 GO:GO:0043065 GO:GO:0044822 GO:GO:0044822 MGI_trans_name:Zfp346-001 Vega_translation:214559 Vega_translation:OTTMUSP00000048651 goslim_goa:GO:0003674 goslim_goa:GO:0003723 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0005730 goslim_goa:GO:0005737 goslim_goa:GO:0008150 goslim_goa:GO:0019899 goslim_goa:GO:0043167 goslim_goa:GO:0043226 protein_id:AAD52017.1 protein_id:AAH55075.1 OTTP:OTTMUSP00000048651 OTTT:OTTMUST00000089114 UniParc:UPI0000021C0C
definition	note : transcript_id=ENSMUST00000021937 protein_id : ENSMUSP00000021937 translation : MECPAPDATDAADPGEAGPYKGSEEPEGREPDGVRFDRERARRLWEAVSGAQPAGREEVEHMIQKNQCLFTSTQCKVCCAMLISESQKLAHYQSKKHANKVKRYLAIHGMETIKGDVKRLDSDQKSSRSKDKNHCCPICNMTFSSPAVAQSHYLGKTHAKSLKLKQQSTKGAALQQNREMLDPDKFCSLCHSTFNDPAMAQQHYMGKRHRKQETKLKLMAHYGRLADPAVSDLPAGKGYPCKTCKIVLNSIEQYQAHVSGFKHKNQSPKTLVTLGSQTPVQTQPTPKDSSTVQD

name	Zfp346 (ENSMUSG00000021481) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	RefSeq_peptide_predicted:XP_006517322.1 Vega_transcript:OTTMUST00000089119 Vega_transcript:Zfp346-004 Uniprot/SPTREMBL:E9Q7N8 UCSC:uc007qpy.1 EMBL:AC123709 EMBL:AC154610 GO:GO:0003725 GO:GO:0005515 GO:GO:0005634 GO:GO:0005654 GO:GO:0005730 GO:GO:0008270 GO:GO:0019899 GO:GO:0043065 GO:GO:0044822 MGI_trans_name:Zfp346-004 Vega_translation:214560 Vega_translation:OTTMUSP00000048656 goslim_goa:GO:0003674 goslim_goa:GO:0003723 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0005730 goslim_goa:GO:0008150 goslim_goa:GO:0019899 goslim_goa:GO:0043167 goslim_goa:GO:0043226 OTTP:OTTMUSP00000048656 OTTT:OTTMUST00000089119 UniParc:UPI0001DD3534
definition	note : transcript_id=ENSMUST00000159278 protein_id : ENSMUSP00000125078 translation : MECPAPDATDAADPGEAGPYKGSEEPEGREPDGVRFDRERARRLWEAVSGAQPAGREEVEHMIQKNQCLFTSTQCKVCCAMLISESQKLAHYQSKKHANKVKRYLAIHGMETIKGDVKRLDSDQKSSRSKDKNHCCPICNMTFSSPAVAQSHYLGKTHAKSLKLKQQSTKGAALSKHLTNPFLVASTLALQQNREMLDPDKFCSLCHSTFNDPAMAQQHYMGKRHRKQETKLKLMAHYGRLADPAVSDLPGKGYPCKTCKIVLNSIEQYQAHVSGFKHKNQSPKTLVTLGSQTPVQTQPTPKDSSTVQD

name	Zfp346 (ENSMUSG00000021481) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000089128 Vega_transcript:Zfp346-013 Uniprot/SPTREMBL:E0CYH6 EMBL:AC123709 EMBL:AC154610 GO:GO:0003725 GO:GO:0005515 GO:GO:0005634 GO:GO:0005654 GO:GO:0005730 GO:GO:0019899 GO:GO:0043065 GO:GO:0044822 MGI_trans_name:Zfp346-013 Vega_translation:214561 Vega_translation:OTTMUSP00000048662 goslim_goa:GO:0003674 goslim_goa:GO:0003723 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0005730 goslim_goa:GO:0008150 goslim_goa:GO:0019899 goslim_goa:GO:0043226 OTTP:OTTMUSP00000048662 OTTT:OTTMUST00000089128 UniParc:UPI0001DD3536
definition	note : transcript_id=ENSMUST00000161551 protein_id : ENSMUSP00000124180 translation : MECPAPDATDAADPGEAGPYKGSEEPEGREPDGVRFDRERARRLWEAVSGAQPAGREEVEHMIQKNQCLFTSTQCKVCCAMLISESQKLAHYQPCSRIERC

name	Zfp346 (ENSMUSG00000021481) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000089117 Vega_transcript:Zfp346-002 Uniprot/SPTREMBL:E9PYN2 UCSC:uc007qpy.1 EMBL:AC123709 EMBL:AC154610 GO:GO:0003725 GO:GO:0005515 GO:GO:0005634 GO:GO:0005654 GO:GO:0005730 GO:GO:0008270 GO:GO:0019899 GO:GO:0043065 GO:GO:0044822 MGI_trans_name:Zfp346-002 Vega_translation:214562 Vega_translation:OTTMUSP00000048654 goslim_goa:GO:0003674 goslim_goa:GO:0003723 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0005730 goslim_goa:GO:0008150 goslim_goa:GO:0019899 goslim_goa:GO:0043167 goslim_goa:GO:0043226 OTTP:OTTMUSP00000048654 OTTT:OTTMUST00000089117 UniParc:UPI0001DD3535
definition	note : transcript_id=ENSMUST00000159147 protein_id : ENSMUSP00000124107 translation : MECPAPDATDAADPGEAGPYKGSEEPEGREPDGVRFDRERARRLWEAVSGAQPAGREEVEHMIQKNQCLFTSTQCKVCCAMLISESQKLAHYQSSRSKDKNHCCPICNMTFSSPAVAQSHYLGKTHAKSLKLKQQSTKGAALQQNREMLDPDKFCSLCHSTFNDPAMAQQHYMGKRHRKQETKLKLMAHYGRLADPAVSDLPAGKGYPCKTCKIVLNSIEQYQAHVSGFKHKNQSPKTLVTLGSQTPVQTQPTPKDSSTVQD

name	Zfp346 (ENSMUSG00000021481) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000089118 Vega_transcript:Zfp346-003 Uniprot/SPTREMBL:E0CZ32 UCSC:uc007qpy.1 EMBL:AC123709 EMBL:AC154610 EMBL:CH466546 GO:GO:0003725 GO:GO:0005515 GO:GO:0005634 GO:GO:0005654 GO:GO:0005730 GO:GO:0008270 GO:GO:0019899 GO:GO:0043065 GO:GO:0044822 MGI_trans_name:Zfp346-003 Vega_translation:214563 Vega_translation:OTTMUSP00000048655 goslim_goa:GO:0003674 goslim_goa:GO:0003723 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0005730 goslim_goa:GO:0008150 goslim_goa:GO:0019899 goslim_goa:GO:0043167 goslim_goa:GO:0043226 protein_id:EDL41173.1 OTTP:OTTMUSP00000048655 OTTT:OTTMUST00000089118 UniParc:UPI000154A554
definition	note : transcript_id=ENSMUST00000162476 protein_id : ENSMUSP00000125743 translation : MECPAPDATDAADPGEAGPYKGSEEPEGREPDGVRFDRERARRLWEAVSGAQPAGREEVEHMIQKNQCLFTSTQCKVCCAMLISESQKLAHYQSKKHANKVKRYLAIHGMETIKGDVKRLDSDQPCSRIERC

name	Zfp346 (ENSMUSG00000021481) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000089123 Vega_transcript:Zfp346-008 Uniprot/SPTREMBL:E0CYN4 UCSC:uc007qpy.1 EMBL:AC123709 EMBL:AC154610 EMBL:CH466546 GO:GO:0003725 GO:GO:0005515 GO:GO:0005634 GO:GO:0005654 GO:GO:0005730 GO:GO:0008270 GO:GO:0019899 GO:GO:0043065 GO:GO:0044822 MGI_trans_name:Zfp346-008 Vega_translation:214564 Vega_translation:OTTMUSP00000048659 goslim_goa:GO:0003674 goslim_goa:GO:0003723 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0005730 goslim_goa:GO:0008150 goslim_goa:GO:0019899 goslim_goa:GO:0043167 goslim_goa:GO:0043226 protein_id:EDL41172.1 OTTP:OTTMUSP00000048659 OTTT:OTTMUST00000089123 UniParc:UPI000154A553
definition	note : transcript_id=ENSMUST00000160660 protein_id : ENSMUSP00000124034 translation : MECPAPDATDAADPGEAGPYKGSEEPEGREPDGVRFDRERARRLWEAVSGAQPAGREEVEHMIQKNQCLFTSTQCKVCCAMLISESQKLAHYQSKKHANKVKRYLAIHGMETIKGDVKRLDSDQLGRATPARRVK

name	Zfp346 (ENSMUSG00000021481) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000089127 Vega_transcript:Zfp346-012 Uniprot/SPTREMBL:E0CZ32 UCSC:uc007qpy.1 EMBL:AC123709 EMBL:AC154610 EMBL:CH466546 GO:GO:0003725 GO:GO:0005515 GO:GO:0005634 GO:GO:0005654 GO:GO:0005730 GO:GO:0008270 GO:GO:0019899 GO:GO:0043065 GO:GO:0044822 MGI_trans_name:Zfp346-012 Vega_translation:214565 Vega_translation:OTTMUSP00000048661 goslim_goa:GO:0003674 goslim_goa:GO:0003723 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0005730 goslim_goa:GO:0008150 goslim_goa:GO:0019899 goslim_goa:GO:0043167 goslim_goa:GO:0043226 protein_id:EDL41173.1 OTTP:OTTMUSP00000048661 OTTT:OTTMUST00000089127 UniParc:UPI000154A554
definition	note : transcript_id=ENSMUST00000162428 protein_id : ENSMUSP00000125389 translation : MECPAPDATDAADPGEAGPYKGSEEPEGREPDGVRFDRERARRLWEAVSGAQPAGREEVEHMIQKNQCLFTSTQCKVCCAMLISESQKLAHYQSKKHANKVKRYLAIHGMETIKGDVKRLDSDQPCSRIERC

name	Zfp346 (ENSMUSG00000021481) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000089124 Vega_transcript:Zfp346-009 Uniprot/SPTREMBL:F7CTY2 UCSC:uc007qpy.1 GO:GO:0003725 GO:GO:0005515 GO:GO:0005634 GO:GO:0005654 GO:GO:0005730 GO:GO:0008270 GO:GO:0019899 GO:GO:0043065 GO:GO:0044822 MGI_trans_name:Zfp346-009 Vega_translation:214566 Vega_translation:OTTMUSP00000048660 goslim_goa:GO:0003674 goslim_goa:GO:0003723 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0005730 goslim_goa:GO:0008150 goslim_goa:GO:0019899 goslim_goa:GO:0043167 goslim_goa:GO:0043226 OTTP:OTTMUSP00000048660 OTTT:OTTMUST00000089124 UniParc:UPI0001DD3537
definition	codon_start : 3 note : transcript_id=ENSMUST00000161077 protein_id : ENSMUSP00000125204 translation : XYKGSEEPEGREPDGVRFDRERARRLWEAVSGAQPAGREEVEHMIQKNQCLFTSTQCKVCCAMLISESQKLAHYQSKKHANKVKRYLAIHGMETIKGDVKRLDSDQKSSRSKDKNHCCPICNMTFSSPAVAQSHYLGKTHAKSLKLKQQSTKGAALSKHLTNPFLVASTLALQQNREMLDPDKFCSLCHSTFNDPAMAQQHYMGKRHRKQETKLKLMAHYGRLADPAVSDLPGHPKHW

name	Gm17617 (ENSMUSG00000091768) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Uniprot/SPTREMBL:F6TMR5 MGI_trans_name:Gm17617-201 UniParc:UPI0001F78F1A
definition	note : transcript_id=ENSMUST00000164344 protein_id : ENSMUSP00000127490 translation : LRTLGAKTPVGTQ

name
type	misc_feature
link
xref
definition	note : contig AC154610.3 1..163811(-1)

name
type	misc_feature
link
xref
definition	note : contig AC123709.9 27600..99670(1)

name	Zfp346 (ENSMUSG00000021481)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000089120 Vega_transcript:OTTMUST00000089120 MGI_trans_name:Zfp346-005 OTTT:OTTMUST00000089120
definition	note : retained_intron note : transcript_id=ENSMUST00000162288

name	Zfp346 (ENSMUSG00000021481)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000089125 Vega_transcript:OTTMUST00000089125 MGI_trans_name:Zfp346-010 OTTT:OTTMUST00000089125
definition	note : retained_intron note : transcript_id=ENSMUST00000160310

name	Zfp346 (ENSMUSG00000021481)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000089126 Vega_transcript:OTTMUST00000089126 MGI_trans_name:Zfp346-011 OTTT:OTTMUST00000089126
definition	note : retained_intron note : transcript_id=ENSMUST00000162653

Polymorphisms Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Zfp346 (ENSMUSG00000021481)
Transcript ID	ENSMUST00000161077

Reports
substitution
cSNPs	0
Insertion	30
Deletion	21
SNPs	-1kb 55100468(c.-4933G>A), 55100489(c.-4912A>C), 55100544(c.-4857A>G), 55100675(c.-4726T>G), 55100676(c.-4725T>A), 55100979(c.-4422G>A), 55100998(c.-4403A>G), 55101640(c.-3761A>G), 55101731(c.-3670T>C), 55101733(c.-3668C>T), 55101803(c.-3598C>T), 55101866(c.-3535G>A), 55101934(c.-3467A>G), 55101936(c.-3465T>C), 55101993(c.-3408G>T), 55102008(c.-3393G>A), 55102494(c.-2907A>G), 55102629(c.-2772G>T), 55102961(c.-2440T>C), 55102963(c.-2438C>A), 55103401(c.-2000A>G), 55103626(c.-1775T>C), 55104001(c.-1400A>G), 55104295(c.-1106C>A), 55104370(c.-1031T>C), 55104372(c.-1029C>A), 55104943(c.-458T>G), 55105113(c.-288A>C), 5'UTR CDS 3'UTR INTRON 55105714(c.118+196C>A), 55106166(c.118+648G>A), 55106378(c.118+860G>A), 55106611(c.118+1093A>C), 55106778(c.118+1260T>C), 55106812(c.118+1294C>T), 55107018(c.118+1500A>G), 55107640(c.118+2122C>T), 55107860(c.118+2342A>G), 55107881(c.118+2363T>C), 55108139(c.118+2621A>G), 55108785(c.118+3267T>C), 55108851(c.118+3333T>G), 55109083(c.118+3565G>T), 55109220(c.118+3702G>T), 55109353(c.119-3683C>A), 55109522(c.119-3514C>T), 55109825(c.119-3211A>T), 55111032(c.119-2004G>A), 55111065(c.119-1971G>A), 55111472(c.119-1564A>G), 55111560(c.119-1476G>A), 55111760(c.119-1276A>G), 55111940(c.119-1096C>T), 55112046(c.119-990T>C), 55113206(c.222+67G>A), 55113409(c.223-269C>T), 55113420(c.223-258G>T), 55113467(c.223-211C>A), 55113492(c.223-186T>C), 55114155(c.315+385T>C), 55114215(c.315+445G>A), 55114275(c.315+505A>G), 55114408(c.315+638A>G), 55114496(c.315+726A>G), 55114504(c.315+734G>A), 55114734(c.316-746A>G), 55115241(c.316-239C>T), 55115373(c.316-107G>A), 55115379(c.316-101G>A), 55115666(c.460+42T>C), 55116401(c.460+777C>T), 55116437(c.460+813C>T), 55116461(c.460+837T>C), 55116747(c.460+1123G>T), 55117235(c.460+1611A>G), 55117242(c.460+1618C>T), 55118119(c.460+2495T>G), 55118140(c.460+2516T>C), 55118233(c.460+2609A>G), 55118425(c.460+2801A>C), 55118478(c.460+2854A>G), 55118496(c.460+2872T>C), 55118549(c.460+2925G>A), 55118958(c.461-3324A>G), 55118965(c.461-3317A>G), 55118978(c.461-3304T>A), 55119194(c.461-3088A>G), 55119829(c.461-2453C>T), 55119847(c.461-2435A>G), 55120061(c.461-2221G>T), 55121939(c.461-343T>C), 55122156(c.461-126T>C), 55122956(c.694+441C>T), 55123207(c.694+692A>G), 55123614(c.694+1099A>G), 55123758(c.694+1243C>T), 55123760(c.694+1245A>G), 55123775(c.694+1260C>T), 55124003(c.694+1488A>G), 55124318(c.694+1803C>T), 55124655(c.694+2140T>C), 55125223(c.694+2708T>C), 55125425(c.694+2910G>T), 55126365(c.694+3850A>C), 55126521(c.694+4006G>A), 55126615(c.694+4100T>C), 55126847(c.694+4332G>A), 55127875(c.695-4432G>A), 55128445(c.695-3862C>T), 55128878(c.695-3429A>G), 55128888(c.695-3419C>T), 55129374(c.695-2933A>G), 55129413(c.695-2894A>G), 55129748(c.695-2559C>G), 55129795(c.695-2512C>T), 55131617(c.695-690A>T), 55131629(c.695-678G>A), 55132172(c.695-135C>T), +1kb 55132452(c.126C>G), 55134137(c.1811A>G), 55134426(c.2100A>G), 55134435(c.2109T>C), 55134702(c.2376A>C), 55134963(c.2637C>T), 55135158(c.2832T>C), 55135356(c.3030C>G), 55135357(c.3031A>G), 55135667(c.3341T>G), 55135737(c.3411C>T), 55136267(c.3941A>G), 55136326(c.4000A>T), 55136343(c.4017C>T), 55136400(c.4074A>G), 55136485(c.4159T>C), 55136563(c.4237A>T), 55136870(c.4544C>T), 55136876(c.4550G>C), 55136918(c.4592A>G), 55137147(c.4821A>G), 55137197(c.4871A>G), 55137340(c.*5014A>G),
Insertions	-1kb 55100610 (c.-4791_-4790insCACAAACTT), 55101689 (c.-3712_-3711insCCCCA), 55102233 (c.-3168_-3167insCT), 55102881 (c.-2520_-2519insTTTA), 5'UTR CDS 3'UTR INTRON 55105723 (c.118+211dupC), 55108607 (c.118+3101dupT), 55110432 (c.119-2601_119-2600insTCTAA), 55117099 (c.460+1477_460+1479dupACA), 55119135 (c.461-3148_461-3147dupAC), 55119371 (c.461-2912_461-2911dupAA), 55120032 (c.461-2243_461-2239dupGTTTT), 55120911 (c.461-1368dupT), 55120914 (c.461-1368dupT), 55120926 (c.461-1354dupT), 55120929 (c.461-1353_461-1352insT), 55120936 (c.461-1345dupT), 55120939 (c.461-1342dupT), 55123009 (c.694+492_694+494dupAAA), 55123104 (c.694+590_694+591insTT), 55124170 (c.694+1662_694+1663dupAA), 55126635 (c.694+4131_694+4132dupAA), 55127778 (c.695-4529_695-4528insAC), 55128254 (c.695-4045_695-4044dupTT), 55130815 (c.695-1492_695-1491insTAGT), 55131141 (c.695-1165dupG), 55131798 (c.695-509dupA), 55131802 (c.695-505dupA), +1kb 55133900 (c.1574_1575insAG), 55134890 (c.2564_2565insT), 55135617 (c.3291_3292insT),
Deletions	-1kb 55100752 (c.-4648_-4640delAAACTAAAA), 55100841 (c.-4559_-4557delAAA), 55101641 (c.-3759delA), 55101849 (c.-3551delT), 5'UTR CDS 3'UTR INTRON 55106587 (c.118+1083_118+1084delTT), 55111217 (c.119-1818_119-1813delAGGAGA), 55112340 (c.119-685_119-684delAA), 55114534 (c.315+766_315+767delTA), 55116863 (c.460+1242delC), 55118825 (c.460+3203delA), 55119139 (c.461-3132_461-3130delATA), 55119149 (c.461-3132_461-3130delATA), 55120839 (c.461-1442_461-1437delAGAAGA), 55127611 (c.695-4695delT), 55127626 (c.695-4680_695-4675delCATATA), 55127799 (c.695-4507_695-4504delCTCT), 55129287 (c.695-3017_695-3016delCT), 55130031 (c.695-2264_695-2261delGAGA), 55131701 (c.695-595_695-592delGCGC), 55131711 (c.695-595_695-592delGCGC), 55131850 (c.695-456_695-455delCT), +1kb
coding sequence substitutions
premature termination by the nucleotide substitution	0
synonymous num	0
non-synonymous num	0
synonymous substitutions
non-synonymous substitutions
B6 transcript (ENSMUST00000161077)	YKGSEEPEGREPDGVRFDRERARRLWEAVSGAQPAGREEVEHMIQKNQCLFTSTQCKVCC AMLISESQKLAHYQSKKHANKVKRYLAIHGMETIKGDVKRLDSDQKSSRSKDKNHCCPIC NMTFSSPAVAQSHYLGKTHAKSLKLKQQSTKGAALSKHLTNPFLVASTLALQQNREMLDP DKFCSLCHSTFNDPAMAQQHYMGKRHRKQETKLKLMAHYGRLADPAVSDLPGHPKHW*
MSMv4 transcript	YKGSEEPEGREPDGVRFDRERARRLWEAVSGAQPAGREEVEHMIQKNQCLFTSTQCKVCC AMLISESQKLAHYQSKKHANKVKRYLAIHGMETIKGDVKRLDSDQKSSRSKDKNHCCPIC NMTFSSPAVAQSHYLGKTHAKSLKLKQQSTKGAALSKHLTNPFLVASTLALQQNREMLDP DKFCSLCHSTFNDPAMAQQHYMGKRHRKQETKLKLMAHYGRLADPAVSDLPGHPKHW*
homology	100.00 (238 / 238)

Exon Detail Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Zfp346 (ENSMUSG00000021481)
Transcript ID	ENSMUST00000161077


..........TACAGGCAGGCACCACATCCAACCTTATTATTGTCTGGGTTTTTGTTTGT
TTTGTGGGTGTGTTTTGTTTCGTTGAGAGATGATCTATTATTGGAGCAGAGGTTTGTCTT
GAACTCCTGGTCGTCTTGCGTCCTCCAGAGTACTTTGACCACAGCCTTAACTATCTTTTT
CTCGAACAATGTCTTTTTTTTCTCAAATGTGCATTTCTCTAACCTTAGTCTCCCAAATTT
TGGAATAGCAAGTATGAGCCACCGTGCTCAGCCATTAGTAAGTGCTTCTTAGACAGGGTC
TCAGGTAGCCCAGGCTGGCCTCAAGCTCCTAATCTTATATCCTCCACCTCCTGTGTATTG
AGATGAAGAGCTGTACCATTATGTCTGCTTTAATAAGCTAAGTAAAACATTTCTAGAATC
TGGGTCTTAGGTTCTCTTCCAAAGAAATGGGAGAAATTGCCGGGCATGGTGGTGCATGCC
TTTGATCCCAGCACTCGGGAGGCAGAGGCAGGAGGATTTCTGAGTTCGAGGCCAGCCTGG
TCTTCAGAGTGAGTGCCAGGACAGCCAGGGCTACACAGAGAAACCCTGTCTCGAAAAACC
AAAAAGAAAAAAGAAAAGAAATGGGAGATAATTTTCCACATATAGAAAAAGGAAATGACA
AGTGTCCGTCAGTGGCTCACCTTGAGCAAAACTGAGAGCCCTGAGCTAAGAAGTGATCAA
CATGCACCGTTTTTTTCCAATTCACTGGACTCCTAAGGCGCCAGAGGAACCAAAACAAAA
TGAGCCTCTGGGCCCCGCCTCCTCTGGGCCCCGCCCCCTCAGGGCCCCGCCCCAGCGGGA
CTCTGCAGAGCCCAAACTTCGCGAGAGTTGCTGGCCGGGTCAAATCCCCGCCCACCCACT
GCTCGTGGTAGCAGGCCGCATGCGCAGCTTCTTAACGGCGCGTCTTGCCGGAAAGATGGA
GTGTCCTGCGCCCGATGCTACGGATGCTGCGGACCCTGGAGAAGCCGGAC
CGTACAAGGGCTCCGAGGAGCCGGAGGGTCGGGAACCGGACGGAGTGCGCTTTGACCGCGAGAGGGCGCGTCGCCTGTGGGAAGCTGTGTCCGGTGCGCAGCCGGCGGGGAGGGAGGAAG
GTGAGTCGGGGGCTCCGGGGTTGGC..........TACATGATTTCTTTTCCCTCTGTAG
TGGAACACATGATCCAGAAGAACCAGTGTCTCTTCACCAGCACCCAGTGTAAGGTCTGCTGTGCCATGCTGATTTCTGAGTCTCAGAAGCTGGCGCATTACCAG
GTAGGCAATTTCTACTGTCTTCGTG..........CTGTCTTTTTGCTGGGTTCTTGCAG
AGCAAAAAACATGCCAACAAAGTGAAGAGATACCTAGCAATCCATGGAATGGAGACAATAAAGGGGGACGTGAAGAGGCTAGACTCAGATCAG
GTAACACAGCCGCCTTGTTGACACT..........GACCTGTGTTCTCTCTCCCAACCAG
AAGAGCAGCAGAAGCAAAGACAAGAACCACTGCTGCCCCATCTGTAACATGACCTTTTCCTCCCCTGCTGTGGCACAGTCGCACTACCTGGGGAAGACCCACGCAAAGAGCCTAAAGCTGAAGCAGCAGTCCACTAAGGGGGCAG
GTACTGCGCTTCCTGAGTAGTGCTT..........TTCTGTTTGAACTCTCTTACCACAG
CTTTGTCGAAACACCTTACAAATCCTTTCCTTGTGGCCTCCACCTTAGCCTTGCAGCAGAATAGAGAGATGCTAGACCCAGACAAATTCTGCAGCCTCTGCCATTCAACATTCAACGACCCTGCCATGGCTCAGCAACATTATATGGGCAAGAGACACAGGAAGCAGGAGACTAAGCTCAAACTCATGGCACACTATGGGCGGCTGGCGGACCCTGCTGTCTCTGACTTACCAG
GTGAGAAGGCCCCACTCATGTGCAG..........CTGTGTCTGTGTTTTCAAATTACAG
GTCACCCAAAACATTGGTGACACTCGGGAGCCAGACGCCAGTGCAAACACAACCCACTCCAAAGGACTC
AAGCACAGTGCAAGACTAAAGCTGTCCCTGCCTGGTCAGCCTGGTGGGACAGCCATAAGC
CAGTTCCTGGTGACTGGTTAGCCGTGGCTCCTTCCTCCTCCTCTCTTATATCCGAAGAAT
GTGGAGGCATGAGGCCAACTTGGGCTGCAGATCTGCAGATAGCCTGACTGCGCCCAGATG
CAGCTCCTCCTGCCCCTCTTGAGCATGGCCCTATAGGCCATGGCAGGAGACAGGGCTCTG
AGAAGACCTGAGGTGAAGGTTTAGAGGTTGGCCTTCCCCACCCCTCTGGGTGTATGTCCT
ACAGTCCCGATGTCTGTTTTTACTCTCAAGGTCAGTTGGGAGCAAGGTCCTGCAGAGAAG
GGAGAGCACTGTCTCTGGGCTCCAGGCAGCTTTGTGTAGAAATGTGGAGCTAATGTGTCA
TTTCCTATCCCTCAAGTGTGCAGGCTTGCTAGGTATAGATCCTGCCAACCATGAAGTCTC
CCAGAAAACAGAGTCTCCGGCAGAGCACTGCCATCTCCGCTGCCTGCTGTCTCTCCAGTT
CCCTCGTGGTGCTAGGCAGCTGCAGCAGCTCGGCGTCAGAGGAGACTTGAGTGCCCACTG
GGGTCCTGATAGGCACCTAAGGGGGTGCACCAACCCAGGGCCATGTGAGAAAGTCTCCTA
CCTGCTATGTTCCTTGATTCTGTGCCCTTGTAGGTAACTGCCTCCTGCCAGCCTACTAAA
AGGTCACTTGGTGTTAGCTCTATGCCCTTGTGTAGTGGGCGATCCTACCCAGTTGCTGTG
GTGCTATCCCTCCCTTGACCTCCTCAAGAAGATTCTGGGGGAACTAAAAAGGAATTTAGA
ACTGGTGCAGGTTCTACAGAGAGCAATAGGGTCCCCAGACCCTAACCTGAGAAATTCCTT
CTGGGTTTGTGTCCTGGGATCCACTGCAGTGGGTTTATACATAACTGTGGATGGAGCAGG
TCTTCCAGGAAGTATTCCTAAAGCTTGTAGAGATAAAACA..........

No.	Exon / Intron	Start	End	Start Phase	End Phase	Length	Sequence
	5' upstream sequence						..........TACAGGCAGGCACCACATCCAACCTTATTATTGTCTGGGTTTTTGTTTGT TTTGTGGGTGTGTTTTGTTTCGTTGAGAGATGATCTATTATTGGAGCAGAGGTTTGTCTT GAACTCCTGGTCGTCTTGCGTCCTCCAGAGTACTTTGACCACAGCCTTAACTATCTTTTT CTCGAACAATGTCTTTTTTTTCTCAAATGTGCATTTCTCTAACCTTAGTCTCCCAAATTT TGGAATAGCAAGTATGAGCCACCGTGCTCAGCCATTAGTAAGTGCTTCTTAGACAGGGTC TCAGGTAGCCCAGGCTGGCCTCAAGCTCCTAATCTTATATCCTCCACCTCCTGTGTATTG AGATGAAGAGCTGTACCATTATGTCTGCTTTAATAAGCTAAGTAAAACATTTCTAGAATC TGGGTCTTAGGTTCTCTTCCAAAGAAATGGGAGAAATTGCCGGGCATGGTGGTGCATGCC TTTGATCCCAGCACTCGGGAGGCAGAGGCAGGAGGATTTCTGAGTTCGAGGCCAGCCTGG TCTTCAGAGTGAGTGCCAGGACAGCCAGGGCTACACAGAGAAACCCTGTCTCGAAAAACC AAAAAGAAAAAAGAAAAGAAATGGGAGATAATTTTCCACATATAGAAAAAGGAAATGACA AGTGTCCGTCAGTGGCTCACCTTGAGCAAAACTGAGAGCCCTGAGCTAAGAAGTGATCAA CATGCACCGTTTTTTTCCAATTCACTGGACTCCTAAGGCGCCAGAGGAACCAAAACAAAA TGAGCCTCTGGGCCCCGCCTCCTCTGGGCCCCGCCCCCTCAGGGCCCCGCCCCAGCGGGA CTCTGCAGAGCCCAAACTTCGCGAGAGTTGCTGGCCGGGTCAAATCCCCGCCCACCCACT GCTCGTGGTAGCAGGCCGCATGCGCAGCTTCTTAACGGCGCGTCTTGCCGGAAAGATGGA GTGTCCTGCGCCCGATGCTACGGATGCTGCGGACCCTGGAGAAGCCGGAC
1	EXON 1	55,105,399	55,105,518	-	1	120	CGTACAAGGGCTCCGAGGAGCCGGAGGGTCGGGAACCGGACGGAGTGCGCTTTGACCGCG AGAGGGCGCGTCGCCTGTGGGAAGCTGTGTCCGGTGCGCAGCCGGCGGGGAGGGAGGAAG
	INTRON 1 - 2	55,105,519	55,113,035			7,517	GTGAGTCGGGGGCTCCGGGGTTGGC..........TACATGATTTCTTTTCCCTCTGTAG
2	EXON 2	55,113,036	55,113,139	1	0	104	TGGAACACATGATCCAGAAGAACCAGTGTCTCTTCACCAGCACCCAGTGTAAGGTCTGCT GTGCCATGCTGATTTCTGAGTCTCAGAAGCTGGCGCATTACCAG
	INTRON 2 - 3	55,113,140	55,113,677			538	GTAGGCAATTTCTACTGTCTTCGTG..........CTGTCTTTTTGCTGGGTTCTTGCAG
3	EXON 3	55,113,678	55,113,770	0	0	93	AGCAAAAAACATGCCAACAAAGTGAAGAGATACCTAGCAATCCATGGAATGGAGACAATA AAGGGGGACGTGAAGAGGCTAGACTCAGATCAG
	INTRON 3 - 4	55,113,771	55,115,479			1,709	GTAACACAGCCGCCTTGTTGACACT..........GACCTGTGTTCTCTCTCCCAACCAG
4	EXON 4	55,115,480	55,115,624	0	1	145	AAGAGCAGCAGAAGCAAAGACAAGAACCACTGCTGCCCCATCTGTAACATGACCTTTTCC TCCCCTGCTGTGGCACAGTCGCACTACCTGGGGAAGACCCACGCAAAGAGCCTAAAGCTG AAGCAGCAGTCCACTAAGGGGGCAG
	INTRON 4 - 5	55,115,625	55,122,281			6,657	GTACTGCGCTTCCTGAGTAGTGCTT..........TTCTGTTTGAACTCTCTTACCACAG
5	EXON 5	55,122,282	55,122,515	1	1	234	CTTTGTCGAAACACCTTACAAATCCTTTCCTTGTGGCCTCCACCTTAGCCTTGCAGCAGA ATAGAGAGATGCTAGACCCAGACAAATTCTGCAGCCTCTGCCATTCAACATTCAACGACC CTGCCATGGCTCAGCAACATTATATGGGCAAGAGACACAGGAAGCAGGAGACTAAGCTCA AACTCATGGCACACTATGGGCGGCTGGCGGACCCTGCTGTCTCTGACTTACCAG
	INTRON 5 - 6	55,122,516	55,132,306			9,791	GTGAGAAGGCCCCACTCATGTGCAG..........CTGTGTCTGTGTTTTCAAATTACAG
6	EXON 6	55,132,307	55,132,375	1	-	69	GTCACCCAAAACATTGGTGACACTCGGGAGCCAGACGCCAGTGCAAACACAACCCACTCC AAAGGACTC
	3' upstream sequence						AAGCACAGTGCAAGACTAAAGCTGTCCCTGCCTGGTCAGCCTGGTGGGACAGCCATAAGC CAGTTCCTGGTGACTGGTTAGCCGTGGCTCCTTCCTCCTCCTCTCTTATATCCGAAGAAT GTGGAGGCATGAGGCCAACTTGGGCTGCAGATCTGCAGATAGCCTGACTGCGCCCAGATG CAGCTCCTCCTGCCCCTCTTGAGCATGGCCCTATAGGCCATGGCAGGAGACAGGGCTCTG AGAAGACCTGAGGTGAAGGTTTAGAGGTTGGCCTTCCCCACCCCTCTGGGTGTATGTCCT ACAGTCCCGATGTCTGTTTTTACTCTCAAGGTCAGTTGGGAGCAAGGTCCTGCAGAGAAG GGAGAGCACTGTCTCTGGGCTCCAGGCAGCTTTGTGTAGAAATGTGGAGCTAATGTGTCA TTTCCTATCCCTCAAGTGTGCAGGCTTGCTAGGTATAGATCCTGCCAACCATGAAGTCTC CCAGAAAACAGAGTCTCCGGCAGAGCACTGCCATCTCCGCTGCCTGCTGTCTCTCCAGTT CCCTCGTGGTGCTAGGCAGCTGCAGCAGCTCGGCGTCAGAGGAGACTTGAGTGCCCACTG GGGTCCTGATAGGCACCTAAGGGGGTGCACCAACCCAGGGCCATGTGAGAAAGTCTCCTA CCTGCTATGTTCCTTGATTCTGTGCCCTTGTAGGTAACTGCCTCCTGCCAGCCTACTAAA AGGTCACTTGGTGTTAGCTCTATGCCCTTGTGTAGTGGGCGATCCTACCCAGTTGCTGTG GTGCTATCCCTCCCTTGACCTCCTCAAGAAGATTCTGGGGGAACTAAAAAGGAATTTAGA ACTGGTGCAGGTTCTACAGAGAGCAATAGGGTCCCCAGACCCTAACCTGAGAAATTCCTT CTGGGTTTGTGTCCTGGGATCCACTGCAGTGGGTTTATACATAACTGTGGATGGAGCAGG TCTTCCAGGAAGTATTCCTAAAGCTTGTAGAGATAAAACA..........

Sequence Detail Report

Gene Symbol (Gene ID)	Zfp346 (ENSMUSG00000021481)
Transcript ID	ENSMUST00000161077

		SNP Information
Strain :
Sequence Retrieve :
Exon translate : CDS Start ( 1 ) - End ( 238 ) -
Strand :	forward reverse
Show sequence :	nucleotide amino acid
Color information