| Reports |
|---|
| substitution |
|---|
| cSNPs | 12 |
|---|
| Insertion | 15 |
|---|
| Deletion | 13 |
|---|
| SNPs |
+1kb
32547358(c.-531A>G),
32547366(c.-539A>G),
32547367(c.-540C>T),
32547412(c.-585A>C),
32547419(c.-592A>T),
32547422(c.-595T>C),
32547433(c.-606A>C),
32547725(c.-898C>T),
32547728(c.-901A>G),
32547770(c.-943A>G),
32547810(c.-983T>C),
32547839(c.-1012C>A),
32547858(c.-1031G>T),
32547881(c.-1054A>C),
32547884(c.-1057G>C),
32548041(c.-1214A>G),
32548115(c.-1288A>G),
32548163(c.-1336G>T),
32548193(c.-1366A>G),
32548245(c.-1418A>T),
32548301(c.-1474T>G),
32548319(c.-1492C>T),
32548368(c.-1541A>T),
32548374(c.-1547G>T),
32548403(c.-1576C>G),
32548510(c.-1683G>A),
32548511(c.-1684T>C),
32548574(c.-1747T>C),
32548613(c.-1786A>T),
32548689(c.-1862T>A),
32548701(c.-1874G>A),
32548895(c.-2068T>C),
32548925(c.-2098A>C),
32548963(c.-2136G>T),
32549101(c.-2274G>A),
32549102(c.-2275T>A),
32549195(c.-2368C>G),
32549261(c.-2434A>G),
32549266(c.-2439A>G),
32549274(c.-2447C>G),
32549305(c.-2478G>A),
32549307(c.-2480A>G),
32549408(c.-2581T>G),
32549493(c.-2666T>C),
32549510(c.-2683T>G),
32549551(c.-2724C>G),
32549555(c.-2728A>T),
32549556(c.-2729A>G),
32549590(c.-2763T>G),
32549601(c.-2774G>A),
32549675(c.-2848A>G),
32549748(c.-2921T>C),
32549873(c.-3046C>T),
32550291(c.-3464G>A),
32550442(c.-3615C>A),
32550513(c.-3686T>C),
32551166(c.-4339A>T),
32551618(c.-4791C>T),
32551694(c.-4867A>T),
32551752(c.-4925A>G),
32551758(c.-4931T>C),
32551993(c.-5166C>G),
- 5'UTR
- CDS
32545612(c.1216A>C),
32545670(c.1158C>G),
32545700(c.1128G>A),
32546018(c.810T>C),
32546377(c.451G>A),
32546396(c.432T>C),
32546399(c.429G>A),
32546468(c.360A>G),
32546535(c.293T>C),
32546599(c.229T>C),
32546622(c.206T>C),
32546703(c.125C>A),
- 3'UTR
32543887(c.*1504C>T),
32544046(c.*1345C>A),
32544064(c.*1327T>A),
32544117(c.*1274G>A),
32544145(c.*1246A>G),
32544174(c.*1217C>T),
32544185(c.*1206G>T),
32544212(c.*1179T>A),
32544251(c.*1140G>A),
32544255(c.*1136G>A),
32544258(c.*1133A>G),
32544272(c.*1119C>A),
32544360(c.*1031C>T),
32544368(c.*1023C>T),
32544417(c.*974C>T),
32545211(c.*180A>T),
32545299(c.*92A>C),
- INTRON
-
-1kb
32539561(c.*5830C>T),
32539774(c.*5617A>G),
32539878(c.*5513C>T),
32539896(c.*5495T>G),
32540013(c.*5378C>T),
32540029(c.*5362G>A),
32540119(c.*5272G>C),
32540135(c.*5256C>T),
32540297(c.*5094T>A),
32540347(c.*5044C>A),
32540403(c.*4988G>A),
32540433(c.*4958G>A),
32540468(c.*4923C>A),
32540684(c.*4707C>T),
32540753(c.*4638C>T),
32540797(c.*4594C>G),
32540868(c.*4523A>C),
32540905(c.*4486A>C),
32540974(c.*4417C>T),
32541056(c.*4335C>A),
32541129(c.*4262G>T),
32541143(c.*4248C>A),
32541284(c.*4107G>A),
32541290(c.*4101T>A),
32541300(c.*4091G>T),
32541322(c.*4069T>C),
32541351(c.*4040C>T),
32541506(c.*3885A>T),
32541507(c.*3884T>C),
32541535(c.*3856G>A),
32541566(c.*3825T>C),
32541632(c.*3759T>C),
32541699(c.*3692A>G),
32541762(c.*3629T>G),
32541788(c.*3603A>G),
32541860(c.*3531C>G),
32541917(c.*3474T>C),
32542120(c.*3271T>A),
32542207(c.*3184C>G),
32542784(c.*2607C>T),
32543064(c.*2327G>C),
32543294(c.*2097A>G),
32543458(c.*1933T>C),
32543478(c.*1913C>T),
32543479(c.*1912G>A),
32543592(c.*1799T>C),
32543668(c.*1723G>C),
32543675(c.*1716G>C),
|
|---|
| Insertions |
-
+1kb
- 5'UTR
- CDS
- 3'UTR
- INTRON
-
-1kb
|
|---|
| Deletions |
-
+1kb
- 5'UTR
- CDS
- 3'UTR
- INTRON
-
-1kb
|
|---|
| coding sequence substitutions |
|---|
| premature termination by the nucleotide substitution | 0 |
|---|
| synonymous num | 5 |
|---|
| non-synonymous num | 7 |
|---|
| synonymous substitutions |
32545700 (p.Arg376Arg),
32546018 (p.Gly270Gly),
32546396 (p.Ala144Ala),
32546399 (p.Lys143Lys),
32546468 (p.Glu120Glu),
|
|---|
| non-synonymous substitutions |
32545612 (p.Lys406Gln),
32545670 (p.Ile386Met),
32546377 (p.Glu151Lys),
32546535 (p.Val98Ala),
32546599 (p.Ser77Pro),
32546622 (p.Phe69Ser),
32546703 (p.Thr42Lys),
|
|---|
B6 transcript
(ENSMUST00000171322)
|
MEKKPEASGKGQKRKHQDESRIEIDSEALGQDPKRKCQDGTTMVFKVPGKAQKMTPQEPP
DLELAIEQFSKGQVRKSQGETPNQPKPLELTEGPPEQVVTGRAPADSGKGHKRPYSAMEE
NEQIPQKEKKRRLLQNLKLILIKAGKIKGGESEDSHGSETTLRDPEPSTVVALKECLSPD
EREKCCFEETSVTEKKGCVKVEGRRGNSLEPGTQAQIILDSSRGNSLLPNKMAVLAAQKK
PLRDHEKHREMDQILDITEDMEKEIENALGPGPQEEILSSRFKLLITRGDIQTLKNGQWL
NDEVINFYMNLLVERNENQGYPALHVFSTFFYPKLKHSGYSSVKRWTRGINLFEKELILV
PIHQRLHWSLVVIDLRKQSIAYFDSIGQTGKSICETIFQYLQNESKTRRNIELDPLEWKQ
YSMASEEIPLQMNGSDCGMFTCKYADYIARDQPVTFSQQHMPTFRKRMVWEILHSQLL*
|
|
MSMv4 transcript
|
MEKKPEASGKGQKRKHQDESRIEIDSEALGQDPKRKCQDGTKMVFKVPGKAQKMTPQEPP
DLELAIEQSSKGQVRKPQGETPNQPKPLELTEGPPEQAVTGRAPADSGKGHKRPYSAMEE
NEQIPQKEKKRRLLQNLKLILIKAGKIKGGKSEDSHGSETTLRDPEPSTVVALKECLSPD
EREKCCFEETSVTEKKGCVKVEGRRGNSLEPGTQAQIILDSSRGNSLLPNKMAVLAAQKK
PLRDHEKHREMDQILDITEDMEKEIENALGPGPQEEILSSRFKLLITRGDIQTLKNGQWL
NDEVINFYMNLLVERNENQGYPALHVFSTFFYPKLKHSGYSSVKRWTRGINLFEKELILV
PIHQRLHWSLVVIDLRKQSIAYFDSMGQTGKSICETIFQYLQNESQTRRNIELDPLEWKQ
YSMASEEIPLQMNGSDCGMFTCKYADYIARDQPVTFSQQHMPTFRKRMVWEILHSQLL*
|
| homology | 98.54 (479 / 479) |
|---|
|
